HEADER TRANSFERASE 21-SEP-11 3TW5 TITLE CRYSTAL STRUCTURE OF THE GP42 TRANSGLUTAMINASE FROM PHYTOPHTHORA SOJAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSGLUTAMINASE ELICITOR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: TRANSGLUTAMINASE DOMAIN; COMPND 5 EC: 2.3.2.13; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PHYTOPHTHORA SOJAE; SOURCE 3 ORGANISM_TAXID: 67593; SOURCE 4 EXPRESSION_SYSTEM: PICHIA PASTORIS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: GS115; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PPIC9K KEYWDS CYSTEINE PROTEASE, CONVERGENT EVOLUTION, INNATE IMMUNITY, PATHOGEN- KEYWDS 2 ASSOCIATED MOLECULAR PATTERN (PAMP), PHYTOPHTHORA, TRANGLUTAMINASE, KEYWDS 3 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.REISS,E.KIRCHNER,G.ZOCHER,T.STEHLE REVDAT 5 16-OCT-24 3TW5 1 REMARK REVDAT 4 21-OCT-20 3TW5 1 REMARK SEQADV REVDAT 3 21-DEC-11 3TW5 1 JRNL REVDAT 2 26-OCT-11 3TW5 1 JRNL REVDAT 1 12-OCT-11 3TW5 0 JRNL AUTH K.REISS,E.KIRCHNER,M.GIJZEN,G.ZOCHER,B.LOFFELHARDT, JRNL AUTH 2 T.NURNBERGER,T.STEHLE,F.BRUNNER JRNL TITL STRUCTURAL AND PHYLOGENETIC ANALYSES OF THE GP42 JRNL TITL 2 TRANSGLUTAMINASE FROM PHYTOPHTHORA SOJAE REVEAL AN JRNL TITL 3 EVOLUTIONARY RELATIONSHIP BETWEEN OOMYCETES AND MARINE JRNL TITL 4 VIBRIO BACTERIA. JRNL REF J.BIOL.CHEM. V. 286 42585 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 21994936 JRNL DOI 10.1074/JBC.M111.290544 REMARK 2 REMARK 2 RESOLUTION. 2.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : -3.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 30288 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1594 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.03 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2220 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.16 REMARK 3 BIN R VALUE (WORKING SET) : 0.2940 REMARK 3 BIN FREE R VALUE SET COUNT : 121 REMARK 3 BIN FREE R VALUE : 0.3630 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5227 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.75000 REMARK 3 B22 (A**2) : -1.75000 REMARK 3 B33 (A**2) : 2.62000 REMARK 3 B12 (A**2) : -0.87000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.296 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.221 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.137 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.917 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.899 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5403 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7383 ; 0.889 ; 1.943 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 684 ; 4.461 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 224 ;36.281 ;25.179 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 783 ;13.377 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ; 9.963 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 808 ; 0.060 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4140 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3412 ; 0.341 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5463 ; 0.616 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1991 ; 0.304 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1920 ; 0.529 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 163 A 528 4 REMARK 3 1 B 163 B 528 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 2604 ; 0.24 ; 0.50 REMARK 3 MEDIUM THERMAL 1 B (A**2): 2604 ; 0.12 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3TW5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-OCT-11. REMARK 100 THE DEPOSITION ID IS D_1000067994. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUN-10; 25-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 11.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SLS; SLS REMARK 200 BEAMLINE : X06DA; X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0; 1.255 REMARK 200 MONOCHROMATOR : SI(111); SI(111) REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD; MARMOSAIC REMARK 200 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31882 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.950 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.14000 REMARK 200 R SYM (I) : 0.09000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.66000 REMARK 200 R SYM FOR SHELL (I) : 0.58300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.750 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6M AMMONIUM SULFATE, 0.2M LITHIUM REMARK 280 SULFATE, 0.1M N-CYCLOHEXYL-3-AMINOPROPANESULFONIC ACID (CAPS), REMARK 280 PH 11.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 91.53333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 45.76667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 91.53333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 45.76667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 91.53333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 45.76667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 91.53333 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 45.76667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 339 REMARK 465 ARG A 340 REMARK 465 PHE A 341 REMARK 465 ASN A 342 REMARK 465 GLY A 343 REMARK 465 GLY A 344 REMARK 465 THR A 345 REMARK 465 ASP A 346 REMARK 465 THR A 347 REMARK 465 THR A 348 REMARK 465 ASP A 349 REMARK 465 GLU A 350 REMARK 465 TYR A 351 REMARK 465 GLY A 352 REMARK 465 ARG A 353 REMARK 465 HIS A 354 REMARK 465 SER A 355 REMARK 465 ASN A 356 REMARK 465 ASN A 357 REMARK 465 ALA A 358 REMARK 465 TYR A 359 REMARK 465 ARG A 360 REMARK 465 ALA A 529 REMARK 465 ALA B 339 REMARK 465 ARG B 340 REMARK 465 PHE B 341 REMARK 465 ASN B 342 REMARK 465 GLY B 343 REMARK 465 GLY B 344 REMARK 465 THR B 345 REMARK 465 ASP B 346 REMARK 465 THR B 347 REMARK 465 THR B 348 REMARK 465 ASP B 349 REMARK 465 GLU B 350 REMARK 465 TYR B 351 REMARK 465 GLY B 352 REMARK 465 ARG B 353 REMARK 465 HIS B 354 REMARK 465 SER B 355 REMARK 465 ASN B 356 REMARK 465 ASN B 357 REMARK 465 ALA B 358 REMARK 465 TYR B 359 REMARK 465 ARG B 360 REMARK 465 ALA B 529 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 180 CG CD CE NZ REMARK 470 LYS A 186 CG CD CE NZ REMARK 470 LYS A 235 CG CD CE NZ REMARK 470 LYS A 243 CG CD CE NZ REMARK 470 LYS A 254 CG CD CE NZ REMARK 470 LYS A 255 CG CD CE NZ REMARK 470 LYS A 308 CG CD CE NZ REMARK 470 ARG A 331 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 180 CG CD CE NZ REMARK 470 LYS B 186 CG CD CE NZ REMARK 470 GLN B 217 CG CD OE1 NE2 REMARK 470 LYS B 243 CG CD CE NZ REMARK 470 LYS B 244 CG CD CE NZ REMARK 470 LYS B 254 CG CD CE NZ REMARK 470 LYS B 255 CG CD CE NZ REMARK 470 ASP B 260 CG OD1 OD2 REMARK 470 LYS B 277 CG CD CE NZ REMARK 470 LYS B 308 CG CD CE NZ REMARK 470 ARG B 331 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 204 69.23 36.39 REMARK 500 SER A 210 -128.07 44.53 REMARK 500 ALA A 388 6.87 59.02 REMARK 500 ASN A 426 108.54 -164.32 REMARK 500 ASP A 490 75.77 -109.02 REMARK 500 ASP B 209 42.91 71.79 REMARK 500 SER B 210 -129.74 47.60 REMARK 500 ASN B 426 108.08 -160.75 REMARK 500 TYR B 485 -137.13 51.57 REMARK 500 ASN B 505 6.00 80.67 REMARK 500 CYS B 527 73.18 57.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CXS A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CXS A 530 DBREF 3TW5 A 163 529 UNP Q6Q475 Q6Q475_9STRA 163 529 DBREF 3TW5 B 163 529 UNP Q6Q475 Q6Q475_9STRA 163 529 SEQADV 3TW5 SER A 290 UNP Q6Q475 CYS 290 ENGINEERED MUTATION SEQADV 3TW5 SER B 290 UNP Q6Q475 CYS 290 ENGINEERED MUTATION SEQRES 1 A 367 GLU ALA ASN GLY ASN GLN ASP ILE ALA LYS LEU GLU ALA SEQRES 2 A 367 TYR PHE GLY THR LYS MET GLU MET THR LEU LYS ASP LEU SEQRES 3 A 367 PRO THR VAL GLY VAL HIS THR PRO SER PRO TRP ALA GLY SEQRES 4 A 367 PRO TYR TRP PRO THR TYR GLN ASP SER ILE ASN VAL GLN SEQRES 5 A 367 TRP SER GLN GLY GLN PRO SER ALA ALA GLU LYS TYR ALA SEQRES 6 A 367 LYS ALA PHE GLY LYS ASP VAL LYS THR PHE MET ASP ALA SEQRES 7 A 367 VAL SER LYS LYS ASN GLY ILE ASP SER GLN SER GLY ARG SEQRES 8 A 367 LYS LYS CYS SER SER ASP ASP ASP CYS SER THR LEU THR SEQRES 9 A 367 ASP GLY SER SER CYS SER ILE ARG THR GLY LYS THR SER SEQRES 10 A 367 GLY TYR CYS ILE PRO THR TRP PHE GLY ILE SER HIS ALA SEQRES 11 A 367 TRP SER PRO ALA ALA ILE LEU GLU THR GLU PRO LYS CYS SEQRES 12 A 367 PRO VAL LYS HIS ASN GLY VAL THR PHE GLN PRO MET ASP SEQRES 13 A 367 LEU LYS ALA LEU VAL SER LEU VAL TYR ASP GLY ALA ARG SEQRES 14 A 367 VAL GLN THR VAL PHE THR GLY ALA ARG PHE ASN GLY GLY SEQRES 15 A 367 THR ASP THR THR ASP GLU TYR GLY ARG HIS SER ASN ASN SEQRES 16 A 367 ALA TYR ARG ASP LEU ASN PRO ALA TYR PHE HIS ILE ALA SEQRES 17 A 367 SER ALA ASN ILE LEU GLY LYS LEU ASN SER THR PHE VAL SEQRES 18 A 367 ALA ASP VAL THR ALA GLY ALA GLU VAL TRP ASN GLN PRO SEQRES 19 A 367 VAL ARG GLY PHE LYS VAL TYR GLU GLN THR GLU MET THR SEQRES 20 A 367 LEU GLU GLU GLY ALA GLN THR PHE TYR GLY LEU GLU ALA SEQRES 21 A 367 TYR PRO TRP ASN ALA ALA ALA LYS SER LEU VAL TYR VAL SEQRES 22 A 367 LYS SER ARG LEU SER TRP ILE TYR GLU THR TYR THR ASP SEQRES 23 A 367 GLY GLY LEU VAL SER SER GLY GLN ILE ASP LYS PHE THR SEQRES 24 A 367 THR GLY GLN TYR TYR TYR TYR LEU LEU GLU LEU ASP ASP SEQRES 25 A 367 ALA GLY GLU ILE ILE GLY GLY GLU TRP VAL TYR GLY SER SEQRES 26 A 367 ASP ASP ASP HIS PRO ASP PHE LEU TRP LEU PRO LYS ALA SEQRES 27 A 367 LYS PRO ALA ALA ASN THR VAL THR SER VAL GLY LEU SER SEQRES 28 A 367 TYR ALA ASP VAL SER MET LEU LEU LYS LYS SER ALA ALA SEQRES 29 A 367 CYS THR ALA SEQRES 1 B 367 GLU ALA ASN GLY ASN GLN ASP ILE ALA LYS LEU GLU ALA SEQRES 2 B 367 TYR PHE GLY THR LYS MET GLU MET THR LEU LYS ASP LEU SEQRES 3 B 367 PRO THR VAL GLY VAL HIS THR PRO SER PRO TRP ALA GLY SEQRES 4 B 367 PRO TYR TRP PRO THR TYR GLN ASP SER ILE ASN VAL GLN SEQRES 5 B 367 TRP SER GLN GLY GLN PRO SER ALA ALA GLU LYS TYR ALA SEQRES 6 B 367 LYS ALA PHE GLY LYS ASP VAL LYS THR PHE MET ASP ALA SEQRES 7 B 367 VAL SER LYS LYS ASN GLY ILE ASP SER GLN SER GLY ARG SEQRES 8 B 367 LYS LYS CYS SER SER ASP ASP ASP CYS SER THR LEU THR SEQRES 9 B 367 ASP GLY SER SER CYS SER ILE ARG THR GLY LYS THR SER SEQRES 10 B 367 GLY TYR CYS ILE PRO THR TRP PHE GLY ILE SER HIS ALA SEQRES 11 B 367 TRP SER PRO ALA ALA ILE LEU GLU THR GLU PRO LYS CYS SEQRES 12 B 367 PRO VAL LYS HIS ASN GLY VAL THR PHE GLN PRO MET ASP SEQRES 13 B 367 LEU LYS ALA LEU VAL SER LEU VAL TYR ASP GLY ALA ARG SEQRES 14 B 367 VAL GLN THR VAL PHE THR GLY ALA ARG PHE ASN GLY GLY SEQRES 15 B 367 THR ASP THR THR ASP GLU TYR GLY ARG HIS SER ASN ASN SEQRES 16 B 367 ALA TYR ARG ASP LEU ASN PRO ALA TYR PHE HIS ILE ALA SEQRES 17 B 367 SER ALA ASN ILE LEU GLY LYS LEU ASN SER THR PHE VAL SEQRES 18 B 367 ALA ASP VAL THR ALA GLY ALA GLU VAL TRP ASN GLN PRO SEQRES 19 B 367 VAL ARG GLY PHE LYS VAL TYR GLU GLN THR GLU MET THR SEQRES 20 B 367 LEU GLU GLU GLY ALA GLN THR PHE TYR GLY LEU GLU ALA SEQRES 21 B 367 TYR PRO TRP ASN ALA ALA ALA LYS SER LEU VAL TYR VAL SEQRES 22 B 367 LYS SER ARG LEU SER TRP ILE TYR GLU THR TYR THR ASP SEQRES 23 B 367 GLY GLY LEU VAL SER SER GLY GLN ILE ASP LYS PHE THR SEQRES 24 B 367 THR GLY GLN TYR TYR TYR TYR LEU LEU GLU LEU ASP ASP SEQRES 25 B 367 ALA GLY GLU ILE ILE GLY GLY GLU TRP VAL TYR GLY SER SEQRES 26 B 367 ASP ASP ASP HIS PRO ASP PHE LEU TRP LEU PRO LYS ALA SEQRES 27 B 367 LYS PRO ALA ALA ASN THR VAL THR SER VAL GLY LEU SER SEQRES 28 B 367 TYR ALA ASP VAL SER MET LEU LEU LYS LYS SER ALA ALA SEQRES 29 B 367 CYS THR ALA HET CXS A 1 14 HET CXS A 530 14 HETNAM CXS 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID FORMUL 3 CXS 2(C9 H19 N O3 S) HELIX 1 1 GLY A 166 GLY A 178 1 13 HELIX 2 2 THR A 184 LEU A 188 5 5 HELIX 3 3 PRO A 205 VAL A 213 5 9 HELIX 4 4 SER A 221 PHE A 230 1 10 HELIX 5 5 ASP A 233 ASN A 245 1 13 HELIX 6 6 GLY A 246 SER A 251 5 6 HELIX 7 7 SER A 258 LEU A 265 5 8 HELIX 8 8 ILE A 289 GLU A 300 1 12 HELIX 9 9 GLN A 315 ALA A 330 1 16 HELIX 10 10 ASN A 363 LYS A 377 1 15 HELIX 11 11 THR A 409 GLY A 419 1 11 HELIX 12 12 GLY A 455 LYS A 459 5 5 HELIX 13 13 SER A 513 CYS A 527 1 15 HELIX 14 14 GLY B 166 GLY B 178 1 13 HELIX 15 15 THR B 184 LEU B 188 5 5 HELIX 16 16 PRO B 205 VAL B 213 5 9 HELIX 17 17 SER B 221 PHE B 230 1 10 HELIX 18 18 ASP B 233 ASN B 245 1 13 HELIX 19 19 GLY B 246 SER B 251 5 6 HELIX 20 20 SER B 258 SER B 263 5 6 HELIX 21 21 ILE B 289 GLU B 300 1 12 HELIX 22 22 GLN B 315 GLY B 329 1 15 HELIX 23 23 ASN B 363 LYS B 377 1 15 HELIX 24 24 THR B 409 GLY B 419 1 11 HELIX 25 25 GLY B 450 GLY B 455 1 6 HELIX 26 26 GLN B 456 LYS B 459 5 4 HELIX 27 27 TYR B 485 ASP B 489 5 5 HELIX 28 28 SER B 513 CYS B 527 1 15 SHEET 1 A 5 VAL A 191 VAL A 193 0 SHEET 2 A 5 ASN A 394 MET A 408 -1 O PHE A 400 N GLY A 192 SHEET 3 A 5 VAL A 383 ASP A 385 -1 N ALA A 384 O GLN A 395 SHEET 4 A 5 LEU A 495 PRO A 498 -1 O TRP A 496 N VAL A 383 SHEET 5 A 5 THR A 334 THR A 337 -1 N VAL A 335 O LEU A 497 SHEET 1 B 5 VAL A 191 VAL A 193 0 SHEET 2 B 5 ASN A 394 MET A 408 -1 O PHE A 400 N GLY A 192 SHEET 3 B 5 SER A 431 ILE A 442 -1 O SER A 440 N ARG A 398 SHEET 4 B 5 THR A 461 LEU A 472 -1 O TYR A 468 N VAL A 435 SHEET 5 B 5 ILE A 478 TRP A 483 -1 O GLY A 480 N GLU A 471 SHEET 1 C 3 LYS A 255 CYS A 256 0 SHEET 2 C 3 GLY A 280 PRO A 284 -1 O GLY A 280 N CYS A 256 SHEET 3 C 3 SER A 269 SER A 272 -1 N SER A 272 O TYR A 281 SHEET 1 D 2 VAL A 307 HIS A 309 0 SHEET 2 D 2 VAL A 312 PHE A 314 -1 O PHE A 314 N VAL A 307 SHEET 1 E 5 VAL B 191 VAL B 193 0 SHEET 2 E 5 ASN B 394 MET B 408 -1 O PHE B 400 N GLY B 192 SHEET 3 E 5 VAL B 383 ASP B 385 -1 N ALA B 384 O GLN B 395 SHEET 4 E 5 LEU B 495 PRO B 498 -1 O TRP B 496 N VAL B 383 SHEET 5 E 5 THR B 334 THR B 337 -1 N VAL B 335 O LEU B 497 SHEET 1 F 5 VAL B 191 VAL B 193 0 SHEET 2 F 5 ASN B 394 MET B 408 -1 O PHE B 400 N GLY B 192 SHEET 3 F 5 SER B 431 ILE B 442 -1 O SER B 440 N GLY B 399 SHEET 4 F 5 THR B 461 LEU B 472 -1 O TYR B 466 N SER B 437 SHEET 5 F 5 ILE B 478 TRP B 483 -1 O GLY B 480 N GLU B 471 SHEET 1 G 3 LYS B 255 CYS B 256 0 SHEET 2 G 3 GLY B 280 PRO B 284 -1 O GLY B 280 N CYS B 256 SHEET 3 G 3 SER B 269 SER B 272 -1 N SER B 272 O TYR B 281 SHEET 1 H 2 VAL B 307 HIS B 309 0 SHEET 2 H 2 VAL B 312 PHE B 314 -1 O PHE B 314 N VAL B 307 SSBOND 1 CYS A 256 CYS A 271 1555 1555 2.04 SSBOND 2 CYS A 262 CYS A 282 1555 1555 2.03 SSBOND 3 CYS A 305 CYS A 527 1555 1555 2.04 SSBOND 4 CYS B 256 CYS B 271 1555 1555 2.04 SSBOND 5 CYS B 262 CYS B 282 1555 1555 2.02 SSBOND 6 CYS B 305 CYS B 527 1555 1555 2.04 CISPEP 1 THR A 195 PRO A 196 0 -2.11 CISPEP 2 THR B 195 PRO B 196 0 -2.20 SITE 1 AC1 6 GLU A 404 LYS B 232 PHE B 237 SER B 509 SITE 2 AC1 6 VAL B 510 GLY B 511 SITE 1 AC2 11 LYS A 232 PHE A 237 ALA A 240 VAL A 507 SITE 2 AC2 11 SER A 509 VAL A 510 GLY A 511 GLU B 404 SITE 3 AC2 11 THR B 406 PHE B 417 TYR B 485 CRYST1 195.480 195.480 137.300 90.00 90.00 120.00 P 62 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005116 0.002954 0.000000 0.00000 SCALE2 0.000000 0.005907 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007283 0.00000