HEADER OXIDOREDUCTASE 27-SEP-11 3TZB TITLE QUINONE OXIDOREDUCTASE (NQ02) BOUND TO NSC13000 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBOSYLDIHYDRONICOTINAMIDE DEHYDROGENASE [QUINONE]; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: NRH DEHYDROGENASE [QUINONE] 2, NRH:QUINONE OXIDOREDUCTASE 2, COMPND 5 QUINONE REDUCTASE 2, QR2; COMPND 6 EC: 1.10.99.2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NQO2, NMOR2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS OXIDOREDUCTASE, FAD EXPDTA X-RAY DIFFRACTION AUTHOR M.S.DUNSTAN,D.LEYS REVDAT 3 28-FEB-24 3TZB 1 REMARK SEQADV LINK REVDAT 2 28-AUG-13 3TZB 1 JRNL REVDAT 1 02-NOV-11 3TZB 0 JRNL AUTH K.A.NOLAN,M.S.DUNSTAN,M.C.CARAHER,K.A.SCOTT,D.LEYS, JRNL AUTH 2 I.J.STRATFORD JRNL TITL IN SILICO SCREENING REVEALS STRUCTURALLY DIVERSE, NANOMOLAR JRNL TITL 2 INHIBITORS OF NQO2 THAT ARE FUNCTIONALLY ACTIVE IN CELLS AND JRNL TITL 3 CAN MODULATE NF-KAPPA B SIGNALING. JRNL REF MOL.CANCER THER. V. 11 194 2012 JRNL REFN ISSN 1535-7163 JRNL PMID 22090421 JRNL DOI 10.1158/1535-7163.MCT-11-0543 REMARK 2 REMARK 2 RESOLUTION. 2.19 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6.4_486 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.19 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.980 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.3 REMARK 3 NUMBER OF REFLECTIONS : 42485 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 2148 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.6877 - 5.3929 0.94 2743 148 0.1517 0.1712 REMARK 3 2 5.3929 - 4.2838 0.90 2599 150 0.1198 0.1565 REMARK 3 3 4.2838 - 3.7433 0.89 2586 160 0.1287 0.1766 REMARK 3 4 3.7433 - 3.4015 0.89 2585 137 0.1496 0.1866 REMARK 3 5 3.4015 - 3.1579 0.90 2617 142 0.1729 0.2562 REMARK 3 6 3.1579 - 2.9719 0.92 2683 136 0.1889 0.2682 REMARK 3 7 2.9719 - 2.8231 0.92 2658 144 0.1999 0.3087 REMARK 3 8 2.8231 - 2.7003 0.93 2758 137 0.1885 0.3192 REMARK 3 9 2.7003 - 2.5964 0.94 2704 156 0.1952 0.3066 REMARK 3 10 2.5964 - 2.5069 0.93 2733 122 0.1917 0.2744 REMARK 3 11 2.5069 - 2.4285 0.94 2759 140 0.1984 0.2829 REMARK 3 12 2.4285 - 2.3591 0.95 2789 155 0.2012 0.3039 REMARK 3 13 2.3591 - 2.2970 0.95 2718 140 0.1898 0.3122 REMARK 3 14 2.2970 - 2.2410 0.93 2735 140 0.1909 0.2588 REMARK 3 15 2.2410 - 2.1901 0.92 2670 141 0.2019 0.2767 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 36.32 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.520 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.97850 REMARK 3 B22 (A**2) : 0.41450 REMARK 3 B33 (A**2) : 0.56390 REMARK 3 B12 (A**2) : 0.62100 REMARK 3 B13 (A**2) : 0.38750 REMARK 3 B23 (A**2) : -0.13930 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 7762 REMARK 3 ANGLE : 1.107 10578 REMARK 3 CHIRALITY : 0.071 1116 REMARK 3 PLANARITY : 0.005 1308 REMARK 3 DIHEDRAL : 21.019 2862 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 6.2309 23.1078 22.5613 REMARK 3 T TENSOR REMARK 3 T11: 0.0131 T22: 0.0274 REMARK 3 T33: 0.0300 T12: -0.0044 REMARK 3 T13: -0.0089 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 0.0479 L22: 0.1324 REMARK 3 L33: 0.3896 L12: -0.0607 REMARK 3 L13: -0.1215 L23: 0.1222 REMARK 3 S TENSOR REMARK 3 S11: -0.0112 S12: -0.0028 S13: -0.0154 REMARK 3 S21: -0.0003 S22: -0.0035 S23: 0.0091 REMARK 3 S31: -0.0065 S32: 0.0027 S33: 0.0130 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3TZB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-OCT-11. REMARK 100 THE DEPOSITION ID IS D_1000068108. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-NOV-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42485 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 28.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 200 DATA REDUNDANCY : 1.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08500 REMARK 200 FOR THE DATA SET : 12.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.51 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.5 REMARK 200 DATA REDUNDANCY IN SHELL : 1.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.37100 REMARK 200 FOR SHELL : 4.380 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 465 ALA D 0 REMARK 465 MET D 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N ALA A 0 O HOH A 257 2.05 REMARK 500 OE2 GLU C 87 O HOH C 248 2.05 REMARK 500 O HOH C 266 O HOH C 270 2.06 REMARK 500 O HOH D 297 O HOH D 301 2.09 REMARK 500 OD2 ASP B 83 O HOH B 277 2.12 REMARK 500 O HOH D 260 O HOH D 283 2.13 REMARK 500 O HOH A 288 O HOH A 367 2.13 REMARK 500 OE2 GLU A 87 O HOH A 242 2.18 REMARK 500 O TYR A 166 O HOH A 273 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 367 O HOH D 363 1544 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 77 0.84 -69.89 REMARK 500 TYR A 132 -121.86 46.54 REMARK 500 TYR B 132 -127.39 43.87 REMARK 500 TYR B 155 40.29 -99.13 REMARK 500 ALA B 191 63.42 38.46 REMARK 500 MET C 1 92.39 -46.17 REMARK 500 LYS C 3 122.33 20.23 REMARK 500 SER C 107 -164.12 -164.07 REMARK 500 TYR C 132 -123.97 41.27 REMARK 500 TYR C 155 44.42 -107.68 REMARK 500 TYR D 132 -128.53 49.18 REMARK 500 TYR D 155 40.55 -103.16 REMARK 500 ALA D 191 58.27 35.92 REMARK 500 ALA D 224 9.21 -65.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 3 LYS A 4 -147.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 231 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 173 ND1 REMARK 620 2 HIS A 177 ND1 104.3 REMARK 620 3 CYS A 222 SG 122.4 105.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 231 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 173 ND1 REMARK 620 2 HIS B 177 ND1 105.2 REMARK 620 3 CYS B 222 O 121.9 97.5 REMARK 620 4 CYS B 222 SG 120.9 115.6 93.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 231 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 173 ND1 REMARK 620 2 HIS C 177 ND1 107.6 REMARK 620 3 CYS C 222 SG 126.5 104.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 231 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 173 ND1 REMARK 620 2 HIS D 177 ND1 108.6 REMARK 620 3 CYS D 222 O 116.9 95.8 REMARK 620 4 CYS D 222 SG 126.4 106.3 98.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 231 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 232 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AA A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 231 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD B 232 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AA B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 231 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD C 232 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AA C 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 231 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD D 232 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AA C 230 DBREF 3TZB A 2 229 UNP P16083 NQO2_HUMAN 3 230 DBREF 3TZB B 2 229 UNP P16083 NQO2_HUMAN 3 230 DBREF 3TZB C 2 229 UNP P16083 NQO2_HUMAN 3 230 DBREF 3TZB D 2 229 UNP P16083 NQO2_HUMAN 3 230 SEQADV 3TZB ALA A 0 UNP P16083 EXPRESSION TAG SEQADV 3TZB MET A 1 UNP P16083 EXPRESSION TAG SEQADV 3TZB PHE A 46 UNP P16083 LEU 47 CONFLICT SEQADV 3TZB ALA B 0 UNP P16083 EXPRESSION TAG SEQADV 3TZB MET B 1 UNP P16083 EXPRESSION TAG SEQADV 3TZB PHE B 46 UNP P16083 LEU 47 CONFLICT SEQADV 3TZB ALA C 0 UNP P16083 EXPRESSION TAG SEQADV 3TZB MET C 1 UNP P16083 EXPRESSION TAG SEQADV 3TZB PHE C 46 UNP P16083 LEU 47 CONFLICT SEQADV 3TZB ALA D 0 UNP P16083 EXPRESSION TAG SEQADV 3TZB MET D 1 UNP P16083 EXPRESSION TAG SEQADV 3TZB PHE D 46 UNP P16083 LEU 47 CONFLICT SEQRES 1 A 230 ALA MET GLY LYS LYS VAL LEU ILE VAL TYR ALA HIS GLN SEQRES 2 A 230 GLU PRO LYS SER PHE ASN GLY SER LEU LYS ASN VAL ALA SEQRES 3 A 230 VAL ASP GLU LEU SER ARG GLN GLY CYS THR VAL THR VAL SEQRES 4 A 230 SER ASP LEU TYR ALA MET ASN PHE GLU PRO ARG ALA THR SEQRES 5 A 230 ASP LYS ASP ILE THR GLY THR LEU SER ASN PRO GLU VAL SEQRES 6 A 230 PHE ASN TYR GLY VAL GLU THR HIS GLU ALA TYR LYS GLN SEQRES 7 A 230 ARG SER LEU ALA SER ASP ILE THR ASP GLU GLN LYS LYS SEQRES 8 A 230 VAL ARG GLU ALA ASP LEU VAL ILE PHE GLN PHE PRO LEU SEQRES 9 A 230 TYR TRP PHE SER VAL PRO ALA ILE LEU LYS GLY TRP MET SEQRES 10 A 230 ASP ARG VAL LEU CYS GLN GLY PHE ALA PHE ASP ILE PRO SEQRES 11 A 230 GLY PHE TYR ASP SER GLY LEU LEU GLN GLY LYS LEU ALA SEQRES 12 A 230 LEU LEU SER VAL THR THR GLY GLY THR ALA GLU MET TYR SEQRES 13 A 230 THR LYS THR GLY VAL ASN GLY ASP SER ARG TYR PHE LEU SEQRES 14 A 230 TRP PRO LEU GLN HIS GLY THR LEU HIS PHE CYS GLY PHE SEQRES 15 A 230 LYS VAL LEU ALA PRO GLN ILE SER PHE ALA PRO GLU ILE SEQRES 16 A 230 ALA SER GLU GLU GLU ARG LYS GLY MET VAL ALA ALA TRP SEQRES 17 A 230 SER GLN ARG LEU GLN THR ILE TRP LYS GLU GLU PRO ILE SEQRES 18 A 230 PRO CYS THR ALA HIS TRP HIS PHE GLY SEQRES 1 B 230 ALA MET GLY LYS LYS VAL LEU ILE VAL TYR ALA HIS GLN SEQRES 2 B 230 GLU PRO LYS SER PHE ASN GLY SER LEU LYS ASN VAL ALA SEQRES 3 B 230 VAL ASP GLU LEU SER ARG GLN GLY CYS THR VAL THR VAL SEQRES 4 B 230 SER ASP LEU TYR ALA MET ASN PHE GLU PRO ARG ALA THR SEQRES 5 B 230 ASP LYS ASP ILE THR GLY THR LEU SER ASN PRO GLU VAL SEQRES 6 B 230 PHE ASN TYR GLY VAL GLU THR HIS GLU ALA TYR LYS GLN SEQRES 7 B 230 ARG SER LEU ALA SER ASP ILE THR ASP GLU GLN LYS LYS SEQRES 8 B 230 VAL ARG GLU ALA ASP LEU VAL ILE PHE GLN PHE PRO LEU SEQRES 9 B 230 TYR TRP PHE SER VAL PRO ALA ILE LEU LYS GLY TRP MET SEQRES 10 B 230 ASP ARG VAL LEU CYS GLN GLY PHE ALA PHE ASP ILE PRO SEQRES 11 B 230 GLY PHE TYR ASP SER GLY LEU LEU GLN GLY LYS LEU ALA SEQRES 12 B 230 LEU LEU SER VAL THR THR GLY GLY THR ALA GLU MET TYR SEQRES 13 B 230 THR LYS THR GLY VAL ASN GLY ASP SER ARG TYR PHE LEU SEQRES 14 B 230 TRP PRO LEU GLN HIS GLY THR LEU HIS PHE CYS GLY PHE SEQRES 15 B 230 LYS VAL LEU ALA PRO GLN ILE SER PHE ALA PRO GLU ILE SEQRES 16 B 230 ALA SER GLU GLU GLU ARG LYS GLY MET VAL ALA ALA TRP SEQRES 17 B 230 SER GLN ARG LEU GLN THR ILE TRP LYS GLU GLU PRO ILE SEQRES 18 B 230 PRO CYS THR ALA HIS TRP HIS PHE GLY SEQRES 1 C 230 ALA MET GLY LYS LYS VAL LEU ILE VAL TYR ALA HIS GLN SEQRES 2 C 230 GLU PRO LYS SER PHE ASN GLY SER LEU LYS ASN VAL ALA SEQRES 3 C 230 VAL ASP GLU LEU SER ARG GLN GLY CYS THR VAL THR VAL SEQRES 4 C 230 SER ASP LEU TYR ALA MET ASN PHE GLU PRO ARG ALA THR SEQRES 5 C 230 ASP LYS ASP ILE THR GLY THR LEU SER ASN PRO GLU VAL SEQRES 6 C 230 PHE ASN TYR GLY VAL GLU THR HIS GLU ALA TYR LYS GLN SEQRES 7 C 230 ARG SER LEU ALA SER ASP ILE THR ASP GLU GLN LYS LYS SEQRES 8 C 230 VAL ARG GLU ALA ASP LEU VAL ILE PHE GLN PHE PRO LEU SEQRES 9 C 230 TYR TRP PHE SER VAL PRO ALA ILE LEU LYS GLY TRP MET SEQRES 10 C 230 ASP ARG VAL LEU CYS GLN GLY PHE ALA PHE ASP ILE PRO SEQRES 11 C 230 GLY PHE TYR ASP SER GLY LEU LEU GLN GLY LYS LEU ALA SEQRES 12 C 230 LEU LEU SER VAL THR THR GLY GLY THR ALA GLU MET TYR SEQRES 13 C 230 THR LYS THR GLY VAL ASN GLY ASP SER ARG TYR PHE LEU SEQRES 14 C 230 TRP PRO LEU GLN HIS GLY THR LEU HIS PHE CYS GLY PHE SEQRES 15 C 230 LYS VAL LEU ALA PRO GLN ILE SER PHE ALA PRO GLU ILE SEQRES 16 C 230 ALA SER GLU GLU GLU ARG LYS GLY MET VAL ALA ALA TRP SEQRES 17 C 230 SER GLN ARG LEU GLN THR ILE TRP LYS GLU GLU PRO ILE SEQRES 18 C 230 PRO CYS THR ALA HIS TRP HIS PHE GLY SEQRES 1 D 230 ALA MET GLY LYS LYS VAL LEU ILE VAL TYR ALA HIS GLN SEQRES 2 D 230 GLU PRO LYS SER PHE ASN GLY SER LEU LYS ASN VAL ALA SEQRES 3 D 230 VAL ASP GLU LEU SER ARG GLN GLY CYS THR VAL THR VAL SEQRES 4 D 230 SER ASP LEU TYR ALA MET ASN PHE GLU PRO ARG ALA THR SEQRES 5 D 230 ASP LYS ASP ILE THR GLY THR LEU SER ASN PRO GLU VAL SEQRES 6 D 230 PHE ASN TYR GLY VAL GLU THR HIS GLU ALA TYR LYS GLN SEQRES 7 D 230 ARG SER LEU ALA SER ASP ILE THR ASP GLU GLN LYS LYS SEQRES 8 D 230 VAL ARG GLU ALA ASP LEU VAL ILE PHE GLN PHE PRO LEU SEQRES 9 D 230 TYR TRP PHE SER VAL PRO ALA ILE LEU LYS GLY TRP MET SEQRES 10 D 230 ASP ARG VAL LEU CYS GLN GLY PHE ALA PHE ASP ILE PRO SEQRES 11 D 230 GLY PHE TYR ASP SER GLY LEU LEU GLN GLY LYS LEU ALA SEQRES 12 D 230 LEU LEU SER VAL THR THR GLY GLY THR ALA GLU MET TYR SEQRES 13 D 230 THR LYS THR GLY VAL ASN GLY ASP SER ARG TYR PHE LEU SEQRES 14 D 230 TRP PRO LEU GLN HIS GLY THR LEU HIS PHE CYS GLY PHE SEQRES 15 D 230 LYS VAL LEU ALA PRO GLN ILE SER PHE ALA PRO GLU ILE SEQRES 16 D 230 ALA SER GLU GLU GLU ARG LYS GLY MET VAL ALA ALA TRP SEQRES 17 D 230 SER GLN ARG LEU GLN THR ILE TRP LYS GLU GLU PRO ILE SEQRES 18 D 230 PRO CYS THR ALA HIS TRP HIS PHE GLY HET ZN A 231 1 HET FAD A 232 53 HET AA A 501 15 HET ZN B 231 1 HET FAD B 232 53 HET AA B 501 15 HET ZN C 231 1 HET FAD C 232 53 HET AA C 501 15 HET AA C 230 15 HET ZN D 231 1 HET FAD D 232 53 HETNAM ZN ZINC ION HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM AA 9-AMINOACRIDINE FORMUL 5 ZN 4(ZN 2+) FORMUL 6 FAD 4(C27 H33 N9 O15 P2) FORMUL 7 AA 4(C13 H11 N2 1+) FORMUL 17 HOH *373(H2 O) HELIX 1 1 SER A 16 GLN A 32 1 17 HELIX 2 2 LEU A 41 ASN A 45 1 5 HELIX 3 3 THR A 51 ILE A 55 5 5 HELIX 4 4 ASN A 66 ARG A 78 1 13 HELIX 5 5 ALA A 81 ALA A 94 1 14 HELIX 6 6 PRO A 109 LEU A 120 1 12 HELIX 7 7 PHE A 131 GLY A 135 5 5 HELIX 8 8 THR A 151 THR A 156 5 6 HELIX 9 9 SER A 164 HIS A 173 1 10 HELIX 10 10 PRO A 192 ALA A 195 5 4 HELIX 11 11 SER A 196 GLN A 212 1 17 HELIX 12 12 THR A 213 GLU A 217 5 5 HELIX 13 13 ALA A 224 GLY A 229 1 6 HELIX 14 14 SER B 16 GLN B 32 1 17 HELIX 15 15 LEU B 41 ASN B 45 1 5 HELIX 16 16 THR B 51 ILE B 55 5 5 HELIX 17 17 ASN B 66 GLN B 77 1 12 HELIX 18 18 ALA B 81 ALA B 94 1 14 HELIX 19 19 PRO B 109 LEU B 120 1 12 HELIX 20 20 PHE B 131 GLY B 135 5 5 HELIX 21 21 ALA B 152 THR B 156 5 5 HELIX 22 22 SER B 164 HIS B 173 1 10 HELIX 23 23 SER B 196 THR B 213 1 18 HELIX 24 24 ILE B 214 GLU B 217 5 4 HELIX 25 25 SER C 16 GLN C 32 1 17 HELIX 26 26 THR C 51 ILE C 55 5 5 HELIX 27 27 ASN C 66 GLN C 77 1 12 HELIX 28 28 ALA C 81 ALA C 94 1 14 HELIX 29 29 PRO C 109 LEU C 120 1 12 HELIX 30 30 PHE C 131 GLY C 135 5 5 HELIX 31 31 THR C 151 THR C 156 5 6 HELIX 32 32 ASP C 163 HIS C 173 1 11 HELIX 33 33 SER C 196 THR C 213 1 18 HELIX 34 34 ILE C 214 GLU C 217 5 4 HELIX 35 35 SER D 16 GLN D 32 1 17 HELIX 36 36 THR D 51 ILE D 55 5 5 HELIX 37 37 ASN D 66 GLN D 77 1 12 HELIX 38 38 ALA D 81 ALA D 94 1 14 HELIX 39 39 PRO D 109 LEU D 120 1 12 HELIX 40 40 PHE D 131 GLY D 135 5 5 HELIX 41 41 ALA D 152 THR D 156 5 5 HELIX 42 42 ASP D 163 HIS D 173 1 11 HELIX 43 43 SER D 196 GLN D 212 1 17 HELIX 44 44 THR D 213 GLU D 217 5 5 SHEET 1 A 5 THR A 35 ASP A 40 0 SHEET 2 A 5 LYS A 4 TYR A 9 1 N VAL A 5 O THR A 37 SHEET 3 A 5 LEU A 96 PRO A 102 1 O ILE A 98 N VAL A 8 SHEET 4 A 5 LEU A 141 THR A 148 1 O SER A 145 N PHE A 99 SHEET 5 A 5 LYS A 182 VAL A 183 1 O LYS A 182 N ALA A 142 SHEET 1 B 5 THR A 35 ASP A 40 0 SHEET 2 B 5 LYS A 4 TYR A 9 1 N VAL A 5 O THR A 37 SHEET 3 B 5 LEU A 96 PRO A 102 1 O ILE A 98 N VAL A 8 SHEET 4 B 5 LEU A 141 THR A 148 1 O SER A 145 N PHE A 99 SHEET 5 B 5 GLN A 187 PHE A 190 1 O SER A 189 N VAL A 146 SHEET 1 C 5 THR B 35 ASP B 40 0 SHEET 2 C 5 LYS B 4 TYR B 9 1 N VAL B 5 O THR B 35 SHEET 3 C 5 LEU B 96 PRO B 102 1 O ILE B 98 N LEU B 6 SHEET 4 C 5 LEU B 141 THR B 147 1 O SER B 145 N PHE B 99 SHEET 5 C 5 LYS B 182 VAL B 183 1 O LYS B 182 N ALA B 142 SHEET 1 D 5 THR B 35 ASP B 40 0 SHEET 2 D 5 LYS B 4 TYR B 9 1 N VAL B 5 O THR B 35 SHEET 3 D 5 LEU B 96 PRO B 102 1 O ILE B 98 N LEU B 6 SHEET 4 D 5 LEU B 141 THR B 147 1 O SER B 145 N PHE B 99 SHEET 5 D 5 GLN B 187 SER B 189 1 O GLN B 187 N LEU B 144 SHEET 1 E 5 CYS C 34 ASP C 40 0 SHEET 2 E 5 GLY C 2 TYR C 9 1 N VAL C 5 O THR C 35 SHEET 3 E 5 LEU C 96 PRO C 102 1 O ILE C 98 N VAL C 8 SHEET 4 E 5 LEU C 141 THR C 147 1 O SER C 145 N PHE C 99 SHEET 5 E 5 LYS C 182 VAL C 183 1 O LYS C 182 N ALA C 142 SHEET 1 F 5 CYS C 34 ASP C 40 0 SHEET 2 F 5 GLY C 2 TYR C 9 1 N VAL C 5 O THR C 35 SHEET 3 F 5 LEU C 96 PRO C 102 1 O ILE C 98 N VAL C 8 SHEET 4 F 5 LEU C 141 THR C 147 1 O SER C 145 N PHE C 99 SHEET 5 F 5 GLN C 187 SER C 189 1 O GLN C 187 N LEU C 144 SHEET 1 G 5 THR D 35 ASP D 40 0 SHEET 2 G 5 LYS D 4 TYR D 9 1 N ILE D 7 O SER D 39 SHEET 3 G 5 LEU D 96 PRO D 102 1 O ILE D 98 N VAL D 8 SHEET 4 G 5 LEU D 141 THR D 147 1 O SER D 145 N PHE D 99 SHEET 5 G 5 LYS D 182 VAL D 183 1 O LYS D 182 N ALA D 142 SHEET 1 H 5 THR D 35 ASP D 40 0 SHEET 2 H 5 LYS D 4 TYR D 9 1 N ILE D 7 O SER D 39 SHEET 3 H 5 LEU D 96 PRO D 102 1 O ILE D 98 N VAL D 8 SHEET 4 H 5 LEU D 141 THR D 147 1 O SER D 145 N PHE D 99 SHEET 5 H 5 GLN D 187 SER D 189 1 O SER D 189 N VAL D 146 LINK ND1 HIS A 173 ZN ZN A 231 1555 1555 2.07 LINK ND1 HIS A 177 ZN ZN A 231 1555 1555 2.19 LINK SG CYS A 222 ZN ZN A 231 1555 1555 2.66 LINK ND1 HIS B 173 ZN ZN B 231 1555 1555 2.23 LINK ND1 HIS B 177 ZN ZN B 231 1555 1555 2.20 LINK O CYS B 222 ZN ZN B 231 1555 1555 2.60 LINK SG CYS B 222 ZN ZN B 231 1555 1555 2.76 LINK ND1 HIS C 173 ZN ZN C 231 1555 1555 2.15 LINK ND1 HIS C 177 ZN ZN C 231 1555 1555 2.36 LINK SG CYS C 222 ZN ZN C 231 1555 1555 2.54 LINK ND1 HIS D 173 ZN ZN D 231 1555 1555 2.26 LINK ND1 HIS D 177 ZN ZN D 231 1555 1555 2.27 LINK O CYS D 222 ZN ZN D 231 1555 1555 2.57 LINK SG CYS D 222 ZN ZN D 231 1555 1555 2.70 CISPEP 1 ILE A 128 PRO A 129 0 5.81 CISPEP 2 ILE B 128 PRO B 129 0 1.20 CISPEP 3 ILE C 128 PRO C 129 0 4.73 CISPEP 4 ILE D 128 PRO D 129 0 2.02 SITE 1 AC1 3 HIS A 173 HIS A 177 CYS A 222 SITE 1 AC2 24 HIS A 11 LYS A 15 SER A 16 PHE A 17 SITE 2 AC2 24 ASN A 18 SER A 20 PRO A 102 LEU A 103 SITE 3 AC2 24 TYR A 104 TRP A 105 PHE A 106 THR A 147 SITE 4 AC2 24 THR A 148 GLY A 149 GLY A 150 TYR A 155 SITE 5 AC2 24 GLU A 193 GLU A 197 ARG A 200 HOH A 266 SITE 6 AC2 24 HOH A 373 ASN B 66 ASP B 117 AA B 501 SITE 1 AC3 4 PHE A 126 PHE A 178 TRP B 105 FAD B 232 SITE 1 AC4 3 HIS B 173 HIS B 177 CYS B 222 SITE 1 AC5 23 ASN A 66 ASP A 117 AA A 501 HIS B 11 SITE 2 AC5 23 SER B 16 PHE B 17 ASN B 18 SER B 20 SITE 3 AC5 23 PRO B 102 LEU B 103 TYR B 104 TRP B 105 SITE 4 AC5 23 PHE B 106 THR B 147 THR B 148 GLY B 149 SITE 5 AC5 23 GLY B 150 TYR B 155 GLU B 193 ARG B 200 SITE 6 AC5 23 VAL B 204 HOH B 250 HOH B 286 SITE 1 AC6 4 TRP A 105 FAD A 232 PHE B 126 PHE B 178 SITE 1 AC7 3 HIS C 173 HIS C 177 CYS C 222 SITE 1 AC8 23 HIS C 11 LYS C 15 SER C 16 PHE C 17 SITE 2 AC8 23 ASN C 18 SER C 20 PRO C 102 LEU C 103 SITE 3 AC8 23 TYR C 104 TRP C 105 PHE C 106 THR C 147 SITE 4 AC8 23 THR C 148 GLY C 149 GLY C 150 TYR C 155 SITE 5 AC8 23 GLU C 193 ARG C 200 HOH C 305 HOH C 318 SITE 6 AC8 23 AA C 501 ASP D 117 HOH D 275 SITE 1 AC9 6 MET A 1 TRP C 105 FAD C 232 LEU D 120 SITE 2 AC9 6 PHE D 126 PHE D 178 SITE 1 BC1 3 HIS D 173 HIS D 177 CYS D 222 SITE 1 BC2 26 ASN C 66 ASP C 117 AA C 230 HIS D 11 SITE 2 BC2 26 LYS D 15 SER D 16 PHE D 17 ASN D 18 SITE 3 BC2 26 SER D 20 PRO D 102 LEU D 103 TYR D 104 SITE 4 BC2 26 TRP D 105 PHE D 106 THR D 147 THR D 148 SITE 5 BC2 26 GLY D 149 GLY D 150 TYR D 155 GLU D 193 SITE 6 BC2 26 GLU D 197 ARG D 200 HOH D 280 HOH D 289 SITE 7 BC2 26 HOH D 299 HOH D 310 SITE 1 BC3 7 GLN C 122 PHE C 126 PHE C 178 HOH C 293 SITE 2 BC3 7 TRP D 105 PHE D 106 FAD D 232 CRYST1 50.620 62.101 78.506 92.95 90.10 110.45 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019755 0.007367 0.000443 0.00000 SCALE2 0.000000 0.017186 0.000956 0.00000 SCALE3 0.000000 0.000000 0.012758 0.00000