HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 27-SEP-11 3TZG TITLE CRYSTAL STRUCTURE OF A PORIN-LIKE PROTEIN (BVU_2266) FROM BACTEROIDES TITLE 2 VULGATUS ATCC 8482 AT 2.80 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN BVU_2266; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES VULGATUS; SOURCE 3 ORGANISM_TAXID: 435590; SOURCE 4 STRAIN: ATCC 8482; SOURCE 5 GENE: BVU_2266; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS BETA BARREL, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-BIOLOGY, UNKNOWN KEYWDS 3 FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 01-FEB-23 3TZG 1 SEQADV LINK REVDAT 4 24-JAN-18 3TZG 1 JRNL REVDAT 3 25-OCT-17 3TZG 1 REMARK REVDAT 2 24-DEC-14 3TZG 1 TITLE REVDAT 1 16-NOV-11 3TZG 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN BVU_2266 JRNL TITL 2 (BVU_2266) FROM BACTEROIDES VULGATUS ATCC 8482 AT 2.80 A JRNL TITL 3 RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.93 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 16400 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 830 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.99 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.99 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2904 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2045 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2767 REMARK 3 BIN R VALUE (WORKING SET) : 0.2021 REMARK 3 BIN FREE R VALUE : 0.2572 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.72 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 137 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3791 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 68 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 67.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -6.79600 REMARK 3 B22 (A**2) : -6.79600 REMARK 3 B33 (A**2) : 13.59210 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.371 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.921 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.883 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3868 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5243 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1777 ; 6.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 111 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 562 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3868 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 499 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4030 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.11 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.30 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.63 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|28 - 272 } REMARK 3 ORIGIN FOR THE GROUP (A): 13.1750 13.3104 23.0123 REMARK 3 T TENSOR REMARK 3 T11: -0.1392 T22: -0.0433 REMARK 3 T33: -0.0826 T12: -0.0462 REMARK 3 T13: -0.0475 T23: 0.0764 REMARK 3 L TENSOR REMARK 3 L11: 1.6084 L22: 1.0444 REMARK 3 L33: 3.6751 L12: -0.3025 REMARK 3 L13: 0.2066 L23: 0.4130 REMARK 3 S TENSOR REMARK 3 S11: 0.0116 S12: -0.0083 S13: 0.0653 REMARK 3 S21: 0.0407 S22: -0.0978 S23: 0.1055 REMARK 3 S31: -0.0183 S32: -0.3648 S33: 0.0863 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|29 - 272 } REMARK 3 ORIGIN FOR THE GROUP (A): 16.5170 17.8349 62.7981 REMARK 3 T TENSOR REMARK 3 T11: -0.1317 T22: 0.0654 REMARK 3 T33: -0.2185 T12: -0.0289 REMARK 3 T13: 0.0638 T23: 0.0175 REMARK 3 L TENSOR REMARK 3 L11: 2.1831 L22: 0.8795 REMARK 3 L33: 3.5221 L12: -0.7313 REMARK 3 L13: 1.2727 L23: -0.0597 REMARK 3 S TENSOR REMARK 3 S11: -0.1583 S12: -0.5182 S13: -0.1121 REMARK 3 S21: 0.0448 S22: -0.0084 S23: 0.0639 REMARK 3 S31: -0.2609 S32: -0.6782 S33: 0.1667 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 3. THE MAD PHASES WERE USED AS RESTRAINTS DURING REMARK 3 REFINEMENT. 4. NCS RESTRAINTS WERE APPLIED USING BUSTER'S LSSR REMARK 3 RESTRAINT REPRESENTATION (-AUTONCS). REMARK 4 REMARK 4 3TZG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-OCT-11. REMARK 100 THE DEPOSITION ID IS D_1000068113. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97959,0.96109,0.97938 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : VERTICAL FOCUSING MIRROR; DOUBLE REMARK 200 CRYSTAL SI(111) MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.15 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16458 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 29.933 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11500 REMARK 200 FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.87 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.74200 REMARK 200 R SYM FOR SHELL (I) : 0.74200 REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M PHOSPHATE-CITRATE PH 4.2, 40% 2 REMARK 280 -METHYL-2,4-PENTANEDIOL, NANODROP, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 87.71300 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 42.33150 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 42.33150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 131.56950 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 42.33150 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 42.33150 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 43.85650 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 42.33150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.33150 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 131.56950 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 42.33150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.33150 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 43.85650 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 87.71300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY PROVIDES REMARK 300 SUPPORTING EVIDENCE THAT A MONOMER IS A SIGNIFICANT OLIGOMERIC REMARK 300 STATE IN SOLUTION. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 LYS A 23 REMARK 465 GLU A 24 REMARK 465 LYS A 25 REMARK 465 LYS A 26 REMARK 465 ALA A 27 REMARK 465 CYS A 77 REMARK 465 LEU A 78 REMARK 465 ASN A 79 REMARK 465 THR A 80 REMARK 465 GLY A 81 REMARK 465 ASN A 82 REMARK 465 ASN A 273 REMARK 465 GLY B 0 REMARK 465 LYS B 23 REMARK 465 GLU B 24 REMARK 465 LYS B 25 REMARK 465 LYS B 26 REMARK 465 ALA B 27 REMARK 465 ASP B 28 REMARK 465 GLY B 39 REMARK 465 GLU B 40 REMARK 465 GLU B 41 REMARK 465 ASN B 76 REMARK 465 CYS B 77 REMARK 465 LEU B 78 REMARK 465 ASN B 79 REMARK 465 THR B 80 REMARK 465 GLY B 81 REMARK 465 ASN B 273 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 38 OG1 CG2 REMARK 470 GLU A 40 CG CD OE1 OE2 REMARK 470 GLU A 41 CG CD OE1 OE2 REMARK 470 GLU A 42 CG CD OE1 OE2 REMARK 470 LYS A 46 CD CE NZ REMARK 470 ARG A 51 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 66 CG CD OE1 OE2 REMARK 470 LYS A 83 CG CD CE NZ REMARK 470 LYS A 106 CG CD CE NZ REMARK 470 GLU A 109 CG CD OE1 OE2 REMARK 470 GLU A 110 CG CD OE1 OE2 REMARK 470 LEU A 272 CG CD1 CD2 REMARK 470 THR B 29 OG1 CG2 REMARK 470 THR B 38 OG1 CG2 REMARK 470 GLU B 42 CG CD OE1 OE2 REMARK 470 LYS B 46 CD CE NZ REMARK 470 ARG B 51 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 66 CG CD OE1 OE2 REMARK 470 GLN B 74 CG CD OE1 NE2 REMARK 470 ASN B 82 CG OD1 ND2 REMARK 470 LYS B 106 CG CD CE NZ REMARK 470 GLU B 109 CG CD OE1 OE2 REMARK 470 GLU B 110 CG CD OE1 OE2 REMARK 470 ARG B 216 CZ NH1 NH2 REMARK 470 ASP B 246 CG OD1 OD2 REMARK 470 LEU B 272 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 43 96.24 -162.02 REMARK 500 ASN A 86 161.94 176.22 REMARK 500 VAL A 107 -96.77 -95.25 REMARK 500 SER A 137 -70.20 -56.37 REMARK 500 ASP A 246 67.02 38.07 REMARK 500 GLU A 247 -12.00 79.10 REMARK 500 TYR A 258 -29.40 67.31 REMARK 500 GLN B 43 95.74 -161.37 REMARK 500 ASN B 86 163.47 176.08 REMARK 500 VAL B 107 -95.69 -95.87 REMARK 500 SER B 137 -70.41 -55.53 REMARK 500 GLU B 247 -21.62 80.06 REMARK 500 TYR B 258 -29.83 66.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 393238 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT (RESIDUES 23-273) WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3TZG A 23 273 UNP A6L2L1 A6L2L1_BACV8 23 273 DBREF 3TZG B 23 273 UNP A6L2L1 A6L2L1_BACV8 23 273 SEQADV 3TZG GLY A 0 UNP A6L2L1 EXPRESSION TAG SEQADV 3TZG GLY B 0 UNP A6L2L1 EXPRESSION TAG SEQRES 1 A 252 GLY LYS GLU LYS LYS ALA ASP THR TYR VAL THR LYS VAL SEQRES 2 A 252 THR ASP LEU THR GLY GLU GLU GLU GLN VAL LEU LYS LEU SEQRES 3 A 252 GLU TYR ASP ARG ASP GLY LYS ILE ILE LYS TYR GLY ASP SEQRES 4 A 252 THR PRO VAL ARG TYR GLU GLY ASP GLN ILE THR ILE GLY SEQRES 5 A 252 GLN MSE ASN CYS LEU ASN THR GLY ASN LYS LEU CYS ASN SEQRES 6 A 252 VAL THR PHE GLN ILE GLY LYS GLY LYS ALA ARG GLU SER SEQRES 7 A 252 ARG ALA ARG CYS MSE LEU LYS VAL GLY GLU GLU VAL TYR SEQRES 8 A 252 GLU ALA ASP LYS GLN THR VAL TYR ASP TYR LYS GLY ASP SEQRES 9 A 252 THR ILE PHE ILE ASN SER ASP TYR ARG ALA THR SER ASP SEQRES 10 A 252 TYR ARG PHE LEU LYS LYS VAL GLN GLY LYS TYR VAL PHE SEQRES 11 A 252 ASP GLN LEU GLY ARG LEU LYS GLU VAL MSE THR VAL PHE SEQRES 12 A 252 THR GLU ALA ASN ASP SER VAL SER SER CYS HIS THR TYR SEQRES 13 A 252 TYR ASN TYR ASP ASN ASN ILE ASN TYR GLN ALA ASN LEU SEQRES 14 A 252 ASN LEU GLN ALA TYR VAL ILE ASP TYR ASP GLY VAL ASP SEQRES 15 A 252 SER PHE PHE TYR PHE LEU LEU ASN LEU GLY GLN LEU ARG SEQRES 16 A 252 ASN ARG THR ALA LEU PRO ASN ASP ILE GLY TYR CYS MSE SEQRES 17 A 252 ASN HIS GLY LEU SER THR TYR ASN VAL HIS ALA ASN TYR SEQRES 18 A 252 ARG LEU ASP ASP GLU ASN PRO VAL ARG ILE GLU VAL LEU SEQRES 19 A 252 TYR ASN TYR THR LYS LEU LEU SER ARG ILE ASP LEU SER SEQRES 20 A 252 TYR ASN PRO LEU ASN SEQRES 1 B 252 GLY LYS GLU LYS LYS ALA ASP THR TYR VAL THR LYS VAL SEQRES 2 B 252 THR ASP LEU THR GLY GLU GLU GLU GLN VAL LEU LYS LEU SEQRES 3 B 252 GLU TYR ASP ARG ASP GLY LYS ILE ILE LYS TYR GLY ASP SEQRES 4 B 252 THR PRO VAL ARG TYR GLU GLY ASP GLN ILE THR ILE GLY SEQRES 5 B 252 GLN MSE ASN CYS LEU ASN THR GLY ASN LYS LEU CYS ASN SEQRES 6 B 252 VAL THR PHE GLN ILE GLY LYS GLY LYS ALA ARG GLU SER SEQRES 7 B 252 ARG ALA ARG CYS MSE LEU LYS VAL GLY GLU GLU VAL TYR SEQRES 8 B 252 GLU ALA ASP LYS GLN THR VAL TYR ASP TYR LYS GLY ASP SEQRES 9 B 252 THR ILE PHE ILE ASN SER ASP TYR ARG ALA THR SER ASP SEQRES 10 B 252 TYR ARG PHE LEU LYS LYS VAL GLN GLY LYS TYR VAL PHE SEQRES 11 B 252 ASP GLN LEU GLY ARG LEU LYS GLU VAL MSE THR VAL PHE SEQRES 12 B 252 THR GLU ALA ASN ASP SER VAL SER SER CYS HIS THR TYR SEQRES 13 B 252 TYR ASN TYR ASP ASN ASN ILE ASN TYR GLN ALA ASN LEU SEQRES 14 B 252 ASN LEU GLN ALA TYR VAL ILE ASP TYR ASP GLY VAL ASP SEQRES 15 B 252 SER PHE PHE TYR PHE LEU LEU ASN LEU GLY GLN LEU ARG SEQRES 16 B 252 ASN ARG THR ALA LEU PRO ASN ASP ILE GLY TYR CYS MSE SEQRES 17 B 252 ASN HIS GLY LEU SER THR TYR ASN VAL HIS ALA ASN TYR SEQRES 18 B 252 ARG LEU ASP ASP GLU ASN PRO VAL ARG ILE GLU VAL LEU SEQRES 19 B 252 TYR ASN TYR THR LYS LEU LEU SER ARG ILE ASP LEU SER SEQRES 20 B 252 TYR ASN PRO LEU ASN MODRES 3TZG MSE A 75 MET SELENOMETHIONINE MODRES 3TZG MSE A 104 MET SELENOMETHIONINE MODRES 3TZG MSE A 161 MET SELENOMETHIONINE MODRES 3TZG MSE A 229 MET SELENOMETHIONINE MODRES 3TZG MSE B 75 MET SELENOMETHIONINE MODRES 3TZG MSE B 104 MET SELENOMETHIONINE MODRES 3TZG MSE B 161 MET SELENOMETHIONINE MODRES 3TZG MSE B 229 MET SELENOMETHIONINE HET MSE A 75 8 HET MSE A 104 8 HET MSE A 161 8 HET MSE A 229 8 HET MSE B 75 8 HET MSE B 104 8 HET MSE B 161 8 HET MSE B 229 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 HOH *68(H2 O) HELIX 1 1 ASN A 191 VAL A 196 5 6 HELIX 2 2 GLY A 201 LEU A 210 1 10 HELIX 3 3 ASN B 191 VAL B 196 5 6 HELIX 4 4 GLY B 201 LEU B 210 1 10 SHEET 1 A17 LYS A 33 ASP A 36 0 SHEET 2 A17 VAL A 44 TYR A 49 -1 O LEU A 45 N VAL A 34 SHEET 3 A17 ILE A 55 TYR A 58 -1 O ILE A 56 N GLU A 48 SHEET 4 A17 THR A 61 GLU A 66 -1 O THR A 61 N TYR A 58 SHEET 5 A17 GLN A 69 ILE A 72 -1 O THR A 71 N ARG A 64 SHEET 6 A17 LEU A 84 GLY A 92 -1 O PHE A 89 N ILE A 70 SHEET 7 A17 LYS A 95 LYS A 106 -1 O ARG A 97 N GLN A 90 SHEET 8 A17 VAL A 111 LYS A 123 -1 O LYS A 116 N ALA A 101 SHEET 9 A17 THR A 126 ALA A 135 -1 O ARG A 134 N ASP A 115 SHEET 10 A17 PHE A 141 PHE A 151 -1 O GLY A 147 N ILE A 129 SHEET 11 A17 LEU A 157 GLU A 166 -1 O THR A 165 N LYS A 144 SHEET 12 A17 VAL A 171 ASN A 179 -1 O SER A 172 N PHE A 164 SHEET 13 A17 ASP A 224 MSE A 229 -1 O CYS A 228 N HIS A 175 SHEET 14 A17 SER A 234 ASP A 245 -1 O TYR A 236 N TYR A 227 SHEET 15 A17 ASN A 248 TYR A 256 -1 O GLU A 253 N ASN A 241 SHEET 16 A17 LYS A 260 SER A 268 -1 O LEU A 262 N VAL A 254 SHEET 17 A17 LYS A 33 ASP A 36 -1 N LYS A 33 O SER A 268 SHEET 1 B 2 ILE A 184 ASN A 185 0 SHEET 2 B 2 ALA A 220 LEU A 221 -1 O LEU A 221 N ILE A 184 SHEET 1 C17 LYS B 33 ASP B 36 0 SHEET 2 C17 VAL B 44 TYR B 49 -1 O LEU B 45 N VAL B 34 SHEET 3 C17 ILE B 55 TYR B 58 -1 O ILE B 56 N GLU B 48 SHEET 4 C17 THR B 61 GLU B 66 -1 O THR B 61 N TYR B 58 SHEET 5 C17 GLN B 69 ILE B 72 -1 O THR B 71 N ARG B 64 SHEET 6 C17 LEU B 84 GLY B 92 -1 O PHE B 89 N ILE B 70 SHEET 7 C17 LYS B 95 LYS B 106 -1 O ARG B 102 N CYS B 85 SHEET 8 C17 VAL B 111 LYS B 123 -1 O LYS B 116 N ALA B 101 SHEET 9 C17 THR B 126 ALA B 135 -1 O ARG B 134 N ASP B 115 SHEET 10 C17 PHE B 141 PHE B 151 -1 O GLY B 147 N ILE B 129 SHEET 11 C17 LEU B 157 GLU B 166 -1 O THR B 165 N LYS B 144 SHEET 12 C17 VAL B 171 ASN B 179 -1 O SER B 172 N PHE B 164 SHEET 13 C17 ASP B 224 MSE B 229 -1 O GLY B 226 N TYR B 177 SHEET 14 C17 SER B 234 ASP B 245 -1 O TYR B 236 N TYR B 227 SHEET 15 C17 ASN B 248 TYR B 256 -1 O LEU B 255 N HIS B 239 SHEET 16 C17 LYS B 260 SER B 268 -1 O LEU B 267 N VAL B 250 SHEET 17 C17 LYS B 33 ASP B 36 -1 N LYS B 33 O SER B 268 SHEET 1 D 2 ILE B 184 ASN B 185 0 SHEET 2 D 2 ALA B 220 LEU B 221 -1 O LEU B 221 N ILE B 184 LINK C GLN A 74 N MSE A 75 1555 1555 1.37 LINK C MSE A 75 N ASN A 76 1555 1555 1.35 LINK C CYS A 103 N MSE A 104 1555 1555 1.33 LINK C MSE A 104 N LEU A 105 1555 1555 1.32 LINK C VAL A 160 N MSE A 161 1555 1555 1.32 LINK C MSE A 161 N THR A 162 1555 1555 1.35 LINK C CYS A 228 N MSE A 229 1555 1555 1.33 LINK C MSE A 229 N ASN A 230 1555 1555 1.34 LINK C GLN B 74 N MSE B 75 1555 1555 1.35 LINK C CYS B 103 N MSE B 104 1555 1555 1.33 LINK C MSE B 104 N LEU B 105 1555 1555 1.33 LINK C VAL B 160 N MSE B 161 1555 1555 1.31 LINK C MSE B 161 N THR B 162 1555 1555 1.35 LINK C CYS B 228 N MSE B 229 1555 1555 1.34 LINK C MSE B 229 N ASN B 230 1555 1555 1.35 CRYST1 84.663 84.663 175.426 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011812 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011812 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005700 0.00000