HEADER HYDROLASE 29-SEP-11 3U12 TITLE THE PLECKSTRIN HOMOLOGY (PH) DOMAIN OF USP37 COMPND MOL_ID: 1; COMPND 2 MOLECULE: USP37 PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 4-125; COMPND 5 SYNONYM: UNCHARACTERIZED PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: USP37; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A-LIC KEYWDS STRUCTURAL GENOMICS, PH-DOMAIN, HYDROLASE, STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, SGC EXPDTA X-RAY DIFFRACTION AUTHOR A.DONG,U.B.NAIR,A.WERNIMONT,J.R.WALKER,J.WEIGELT,C.BOUNTRA, AUTHOR 2 A.M.EDWARDS,C.H.ARROWSMITH,S.DHE-PAGANON,STRUCTURAL GENOMICS AUTHOR 3 CONSORTIUM (SGC) REVDAT 2 02-MAY-12 3U12 1 AUTHOR REVDAT 1 09-NOV-11 3U12 0 JRNL AUTH A.DONG,U.B.NAIR,A.WERNIMONT,J.R.WALKER,J.WEIGELT,C.BOUNTRA, JRNL AUTH 2 A.M.EDWARDS,C.H.ARROWSMITH,S.DHE-PAGANON, JRNL AUTH 3 STRUCTURAL GENOMICS CONSORTIUM (SGC) JRNL TITL THE PLECKSTRIN HOMOLOGY (PH) DOMAIN OF USP37 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.74 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 16750 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 848 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.08 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.22 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2857 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1987 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2699 REMARK 3 BIN R VALUE (WORKING SET) : 0.1975 REMARK 3 BIN FREE R VALUE : 0.2181 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.53 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 158 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1589 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 65 REMARK 3 SOLVENT ATOMS : 85 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.08 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.41430 REMARK 3 B22 (A**2) : -0.41430 REMARK 3 B33 (A**2) : 0.82850 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.33 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.928 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1702 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 2303 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 599 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 38 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 248 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1702 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 226 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 1906 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.03 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.06 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.56 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -1.8910 14.4034 13.4215 REMARK 3 T TENSOR REMARK 3 T11: -0.1119 T22: -0.0492 REMARK 3 T33: -0.0430 T12: 0.0428 REMARK 3 T13: -0.0374 T23: 0.1325 REMARK 3 L TENSOR REMARK 3 L11: 2.2257 L22: 5.3561 REMARK 3 L33: 4.5420 L12: -0.6003 REMARK 3 L13: 0.7692 L23: -0.9331 REMARK 3 S TENSOR REMARK 3 S11: 0.0739 S12: -0.1000 S13: 0.0302 REMARK 3 S21: 0.1456 S22: -0.1586 S23: -0.3435 REMARK 3 S31: 0.0029 S32: 0.4617 S33: 0.0847 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): -25.2189 18.2061 4.7372 REMARK 3 T TENSOR REMARK 3 T11: -0.0836 T22: -0.0665 REMARK 3 T33: 0.0036 T12: 0.0076 REMARK 3 T13: -0.0849 T23: 0.0924 REMARK 3 L TENSOR REMARK 3 L11: 4.0989 L22: 1.8753 REMARK 3 L33: 4.5282 L12: -0.7892 REMARK 3 L13: -0.4139 L23: -1.0412 REMARK 3 S TENSOR REMARK 3 S11: 0.0824 S12: 0.3344 S13: -0.1027 REMARK 3 S21: -0.2435 S22: -0.0025 S23: 0.2874 REMARK 3 S31: 0.2574 S32: -0.2808 S33: -0.0799 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3U12 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-OCT-11. REMARK 100 THE RCSB ID CODE IS RCSB068171. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-SEP-11 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : DCM WITH CRYO-COOLED 1ST CRYSTAL REMARK 200 SAGITTALLY BENT 2ND CRYSTAL REMARK 200 FOLLOWED BY VERTICALLY FOCUSING REMARK 200 MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17041 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.080 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 20.300 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : 0.04900 REMARK 200 FOR THE DATA SET : 52.1400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.08 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 19.70 REMARK 200 R MERGE FOR SHELL (I) : 0.79400 REMARK 200 R SYM FOR SHELL (I) : 0.79400 REMARK 200 FOR SHELL : 4.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER, SOLVE/RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE PH 5.6, 2.46 M REMARK 280 AMMONIUM SULFATE, 10 MM DTT , VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.93800 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 145.87600 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 109.40700 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 182.34500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 36.46900 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 72.93800 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 145.87600 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 182.34500 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 109.40700 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 36.46900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 132 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -15 REMARK 465 GLY A -14 REMARK 465 SER A -13 REMARK 465 SER A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 SER A -5 REMARK 465 SER A -4 REMARK 465 GLY A -3 REMARK 465 LEU A -2 REMARK 465 VAL A -1 REMARK 465 PRO A 0 REMARK 465 ARG A 1 REMARK 465 GLY A 2 REMARK 465 LEU A 107 REMARK 465 PRO A 108 REMARK 465 ALA A 109 REMARK 465 ALA A 110 REMARK 465 MSE A 111 REMARK 465 LYS A 112 REMARK 465 PRO A 113 REMARK 465 SER A 114 REMARK 465 GLN A 115 REMARK 465 GLY A 116 REMARK 465 SER A 117 REMARK 465 GLY A 118 REMARK 465 SER A 119 REMARK 465 PHE A 120 REMARK 465 GLY A 121 REMARK 465 ALA A 122 REMARK 465 ILE A 123 REMARK 465 LEU A 124 REMARK 465 GLY A 125 REMARK 465 MSE B -15 REMARK 465 GLY B -14 REMARK 465 SER B -13 REMARK 465 SER B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 SER B -5 REMARK 465 SER B -4 REMARK 465 GLY B -3 REMARK 465 LEU B -2 REMARK 465 VAL B -1 REMARK 465 PRO B 0 REMARK 465 ARG B 1 REMARK 465 MSE B 15 REMARK 465 GLN B 16 REMARK 465 THR B 17 REMARK 465 PRO B 108 REMARK 465 ALA B 109 REMARK 465 ALA B 110 REMARK 465 MSE B 111 REMARK 465 LYS B 112 REMARK 465 PRO B 113 REMARK 465 SER B 114 REMARK 465 GLN B 115 REMARK 465 GLY B 116 REMARK 465 SER B 117 REMARK 465 GLY B 118 REMARK 465 SER B 119 REMARK 465 PHE B 120 REMARK 465 GLY B 121 REMARK 465 ALA B 122 REMARK 465 ILE B 123 REMARK 465 LEU B 124 REMARK 465 GLY B 125 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 21 CD CE NZ REMARK 470 GLU A 33 CG CD OE1 OE2 REMARK 470 ASN A 34 CG OD1 ND2 REMARK 470 LYS A 68 CG CD CE NZ REMARK 470 ARG B 11 CD NE CZ NH1 NH2 REMARK 470 ARG B 13 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 19 CG1 CG2 CD1 REMARK 470 LYS B 21 CG CD CE NZ REMARK 470 GLU B 33 CG CD OE1 OE2 REMARK 470 ASN B 34 CG OD1 ND2 REMARK 470 LYS B 35 NZ REMARK 470 LYS B 58 CE NZ REMARK 470 ARG B 63 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 68 CG CD CE NZ REMARK 470 ASN B 79 CG OD1 ND2 REMARK 470 LYS B 86 CD CE NZ REMARK 470 LYS B 90 CD CE NZ REMARK 470 ARG B 106 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 33 63.45 34.70 REMARK 500 ASN A 34 -13.46 70.45 REMARK 500 ASN A 79 4.86 80.86 REMARK 500 GLU B 33 -114.71 52.93 REMARK 500 SER B 65 59.93 -141.98 REMARK 500 LYS B 68 15.86 58.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2012 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2010 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 1502 DBREF 3U12 A 4 125 UNP Q86W68 Q86W68_HUMAN 4 125 DBREF 3U12 B 4 125 UNP Q86W68 Q86W68_HUMAN 4 125 SEQADV 3U12 MSE A -15 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 GLY A -14 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 SER A -13 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 SER A -12 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 HIS A -11 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 HIS A -10 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 HIS A -9 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 HIS A -8 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 HIS A -7 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 HIS A -6 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 SER A -5 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 SER A -4 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 GLY A -3 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 LEU A -2 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 VAL A -1 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 PRO A 0 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 ARG A 1 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 GLY A 2 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 SER A 3 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 MSE B -15 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 GLY B -14 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 SER B -13 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 SER B -12 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 HIS B -11 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 HIS B -10 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 HIS B -9 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 HIS B -8 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 HIS B -7 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 HIS B -6 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 SER B -5 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 SER B -4 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 GLY B -3 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 LEU B -2 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 VAL B -1 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 PRO B 0 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 ARG B 1 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 GLY B 2 UNP Q86W68 EXPRESSION TAG SEQADV 3U12 SER B 3 UNP Q86W68 EXPRESSION TAG SEQRES 1 A 141 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 141 LEU VAL PRO ARG GLY SER LEU LYS ILE HIS GLY PRO ILE SEQRES 3 A 141 ARG ILE ARG SER MSE GLN THR GLY ILE THR LYS TRP LYS SEQRES 4 A 141 GLU GLY SER PHE GLU ILE VAL GLU LYS GLU ASN LYS VAL SEQRES 5 A 141 SER LEU VAL VAL HIS TYR ASN THR GLY GLY ILE PRO ARG SEQRES 6 A 141 ILE PHE GLN LEU SER HIS ASN ILE LYS ASN VAL VAL LEU SEQRES 7 A 141 ARG PRO SER GLY ALA LYS GLN SER ARG LEU MSE LEU THR SEQRES 8 A 141 LEU GLN ASP ASN SER PHE LEU SER ILE ASP LYS VAL PRO SEQRES 9 A 141 SER LYS ASP ALA GLU GLU MSE ARG LEU PHE LEU ASP ALA SEQRES 10 A 141 VAL HIS GLN ASN ARG LEU PRO ALA ALA MSE LYS PRO SER SEQRES 11 A 141 GLN GLY SER GLY SER PHE GLY ALA ILE LEU GLY SEQRES 1 B 141 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 141 LEU VAL PRO ARG GLY SER LEU LYS ILE HIS GLY PRO ILE SEQRES 3 B 141 ARG ILE ARG SER MSE GLN THR GLY ILE THR LYS TRP LYS SEQRES 4 B 141 GLU GLY SER PHE GLU ILE VAL GLU LYS GLU ASN LYS VAL SEQRES 5 B 141 SER LEU VAL VAL HIS TYR ASN THR GLY GLY ILE PRO ARG SEQRES 6 B 141 ILE PHE GLN LEU SER HIS ASN ILE LYS ASN VAL VAL LEU SEQRES 7 B 141 ARG PRO SER GLY ALA LYS GLN SER ARG LEU MSE LEU THR SEQRES 8 B 141 LEU GLN ASP ASN SER PHE LEU SER ILE ASP LYS VAL PRO SEQRES 9 B 141 SER LYS ASP ALA GLU GLU MSE ARG LEU PHE LEU ASP ALA SEQRES 10 B 141 VAL HIS GLN ASN ARG LEU PRO ALA ALA MSE LYS PRO SER SEQRES 11 B 141 GLN GLY SER GLY SER PHE GLY ALA ILE LEU GLY MODRES 3U12 MSE A 15 MET SELENOMETHIONINE MODRES 3U12 MSE A 73 MET SELENOMETHIONINE MODRES 3U12 MSE A 95 MET SELENOMETHIONINE MODRES 3U12 MSE B 73 MET SELENOMETHIONINE MODRES 3U12 MSE B 95 MET SELENOMETHIONINE HET MSE A 15 8 HET MSE A 73 8 HET MSE A 95 8 HET MSE B 73 8 HET MSE B 95 8 HET SO4 A1000 5 HET SO4 A1003 5 HET SO4 A1004 5 HET ACT A1501 4 HET UNX A1001 1 HET UNX A 126 1 HET UNX A1005 1 HET UNX A1006 1 HET UNX A1007 1 HET UNX A1008 1 HET UNX A1011 1 HET UNX A1013 1 HET UNX A1014 1 HET UNX A1015 1 HET UNX A1016 1 HET UNX A1017 1 HET UNX A1018 1 HET UNX A1019 1 HET UNX A1020 1 HET UNX A1022 1 HET UNX A1023 1 HET UNX A1025 1 HET UNX A1026 1 HET UNX A1027 1 HET UNX A1028 1 HET EDO B2012 4 HET EDO B2010 4 HET SO4 B1001 5 HET ACT B1502 4 HET UNX B1002 1 HET UNX B1004 1 HET UNX B1009 1 HET UNX B1010 1 HET UNX B1012 1 HET UNX B1021 1 HET UNX B1024 1 HET UNX B1029 1 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION HETNAM ACT ACETATE ION HETNAM UNX UNKNOWN ATOM OR ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 3 SO4 4(O4 S 2-) FORMUL 6 ACT 2(C2 H3 O2 1-) FORMUL 7 UNX 29(X) FORMUL 28 EDO 2(C2 H6 O2) FORMUL 40 HOH *85(H2 O) HELIX 1 1 SER A 89 GLN A 104 1 16 HELIX 2 2 SER B 89 GLN B 104 1 16 SHEET 1 A 5 GLY A 18 ILE A 19 0 SHEET 2 A 5 LYS A 5 SER A 14 -1 N SER A 14 O GLY A 18 SHEET 3 A 5 LYS A 23 LYS A 32 -1 O LYS A 23 N ILE A 10 SHEET 4 A 5 LYS A 35 TYR A 42 -1 O VAL A 39 N GLU A 28 SHEET 5 A 5 ARG A 49 GLN A 52 -1 O PHE A 51 N LEU A 38 SHEET 1 B 5 GLY A 18 ILE A 19 0 SHEET 2 B 5 LYS A 5 SER A 14 -1 N SER A 14 O GLY A 18 SHEET 3 B 5 PHE A 81 PRO A 88 -1 O PHE A 81 N ARG A 13 SHEET 4 B 5 GLN A 69 LEU A 76 -1 N LEU A 74 O LEU A 82 SHEET 5 B 5 ILE A 57 PRO A 64 -1 N VAL A 61 O MSE A 73 SHEET 1 C 7 ARG B 49 GLN B 52 0 SHEET 2 C 7 LYS B 35 TYR B 42 -1 N VAL B 40 O ARG B 49 SHEET 3 C 7 LYS B 23 LYS B 32 -1 N GLU B 28 O VAL B 39 SHEET 4 C 7 LYS B 5 ARG B 13 -1 N ILE B 10 O LYS B 23 SHEET 5 C 7 PHE B 81 PRO B 88 -1 O PHE B 81 N ARG B 13 SHEET 6 C 7 GLN B 69 LEU B 76 -1 N LEU B 74 O LEU B 82 SHEET 7 C 7 ILE B 57 PRO B 64 -1 N VAL B 61 O MSE B 73 LINK C SER A 14 N MSE A 15 1555 1555 1.33 LINK C MSE A 15 N GLN A 16 1555 1555 1.37 LINK C LEU A 72 N MSE A 73 1555 1555 1.33 LINK C MSE A 73 N LEU A 74 1555 1555 1.31 LINK C GLU A 94 N MSE A 95 1555 1555 1.35 LINK C MSE A 95 N AARG A 96 1555 1555 1.34 LINK C MSE A 95 N BARG A 96 1555 1555 1.34 LINK C LEU B 72 N MSE B 73 1555 1555 1.33 LINK C MSE B 73 N LEU B 74 1555 1555 1.32 LINK C GLU B 94 N MSE B 95 1555 1555 1.35 LINK C MSE B 95 N ARG B 96 1555 1555 1.36 SITE 1 AC1 3 HIS A 55 GLN A 77 ASN A 105 SITE 1 AC2 3 LYS A 35 GLN A 52 HOH A 161 SITE 1 AC3 3 THR A 20 LYS A 21 EDO B2010 SITE 1 AC4 3 PRO A 9 TRP A 22 ASP A 85 SITE 1 AC5 2 GLN B 52 HOH B 167 SITE 1 AC6 5 SO4 A1004 ASN B 59 VAL B 60 HIS B 103 SITE 2 AC6 5 HOH B 138 SITE 1 AC7 4 HIS B 55 GLN B 77 ASN B 105 HOH B 162 SITE 1 AC8 5 LEU B 4 LYS B 5 ILE B 6 ASP B 91 SITE 2 AC8 5 GLU B 94 CRYST1 64.083 64.083 218.814 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015605 0.009009 0.000000 0.00000 SCALE2 0.000000 0.018019 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004570 0.00000