HEADER MEMBRANE PROTEIN 03-OCT-11 3U2F TITLE ATP SYNTHASE C10 RING IN PROTON-UNLOCKED CONFORMATION AT PH 8.3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATP SYNTHASE SUBUNIT C, MITOCHONDRIAL; COMPND 3 CHAIN: K, L, M, N, O; COMPND 4 SYNONYM: LIPID-BINDING PROTEIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932 KEYWDS F1FO ATP SYNTHASE, PROTON PORE, C10 RING, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.SYMERSKY,V.PAGADALA,D.OSOWSKI,A.KRAH,T.MEIER,J.FARALDO-GOMEZ, AUTHOR 2 D.M.MUELLER REVDAT 4 13-SEP-23 3U2F 1 LINK REVDAT 3 13-JUN-12 3U2F 1 JRNL REVDAT 2 18-APR-12 3U2F 1 JRNL REVDAT 1 08-FEB-12 3U2F 0 JRNL AUTH J.SYMERSKY,V.PAGADALA,D.OSOWSKI,A.KRAH,T.MEIER, JRNL AUTH 2 J.D.FARALDO-GOMEZ,D.M.MUELLER JRNL TITL STRUCTURE OF THE C(10) RING OF THE YEAST MITOCHONDRIAL ATP JRNL TITL 2 SYNTHASE IN THE OPEN CONFORMATION. JRNL REF NAT.STRUCT.MOL.BIOL. V. 19 485 2012 JRNL REFN ISSN 1545-9993 JRNL PMID 22504883 JRNL DOI 10.1038/NSMB.2284 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 24159 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1296 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1666 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.46 REMARK 3 BIN R VALUE (WORKING SET) : 0.1970 REMARK 3 BIN FREE R VALUE SET COUNT : 99 REMARK 3 BIN FREE R VALUE : 0.2400 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2643 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 67 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.70000 REMARK 3 B22 (A**2) : 0.70000 REMARK 3 B33 (A**2) : -1.40000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.183 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.151 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.085 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.522 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2792 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3822 ; 1.042 ; 2.002 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 416 ; 3.521 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 65 ;34.953 ;23.231 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 447 ;13.202 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ; 8.197 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 495 ; 0.070 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1976 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1894 ; 0.413 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3034 ; 0.761 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 898 ; 1.680 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 763 ; 2.773 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : K 1 K 41 REMARK 3 ORIGIN FOR THE GROUP (A): 34.9029 10.9289 32.5729 REMARK 3 T TENSOR REMARK 3 T11: 0.0750 T22: 0.0466 REMARK 3 T33: 0.1179 T12: -0.0153 REMARK 3 T13: -0.0137 T23: -0.0106 REMARK 3 L TENSOR REMARK 3 L11: 0.6356 L22: 0.3874 REMARK 3 L33: 17.6200 L12: 0.0215 REMARK 3 L13: -2.1573 L23: -1.4781 REMARK 3 S TENSOR REMARK 3 S11: 0.0411 S12: -0.1183 S13: 0.0215 REMARK 3 S21: 0.1145 S22: 0.0233 S23: -0.0285 REMARK 3 S31: -0.0939 S32: 0.1308 S33: -0.0644 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : K 42 K 74 REMARK 3 ORIGIN FOR THE GROUP (A): 35.1182 19.2157 27.2296 REMARK 3 T TENSOR REMARK 3 T11: 0.1243 T22: 0.1141 REMARK 3 T33: 0.1687 T12: -0.0322 REMARK 3 T13: -0.0137 T23: -0.0194 REMARK 3 L TENSOR REMARK 3 L11: 0.4062 L22: 0.6830 REMARK 3 L33: 21.2646 L12: 0.1169 REMARK 3 L13: -1.8347 L23: -1.5597 REMARK 3 S TENSOR REMARK 3 S11: 0.0962 S12: -0.1704 S13: 0.0311 REMARK 3 S21: 0.2174 S22: -0.0694 S23: 0.0296 REMARK 3 S31: -0.7809 S32: 0.7658 S33: -0.0268 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 1 L 41 REMARK 3 ORIGIN FOR THE GROUP (A): 26.9761 13.2859 31.6498 REMARK 3 T TENSOR REMARK 3 T11: 0.0615 T22: 0.0284 REMARK 3 T33: 0.0956 T12: -0.0055 REMARK 3 T13: 0.0039 T23: -0.0075 REMARK 3 L TENSOR REMARK 3 L11: 0.5656 L22: 0.7152 REMARK 3 L33: 17.5799 L12: 0.1643 REMARK 3 L13: -0.7504 L23: -2.6994 REMARK 3 S TENSOR REMARK 3 S11: 0.1258 S12: -0.0832 S13: 0.0713 REMARK 3 S21: 0.1468 S22: 0.0578 S23: 0.0224 REMARK 3 S31: -0.2480 S32: -0.1850 S33: -0.1836 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : L 42 L 74 REMARK 3 ORIGIN FOR THE GROUP (A): 22.4677 20.3271 27.7969 REMARK 3 T TENSOR REMARK 3 T11: 0.1351 T22: 0.1152 REMARK 3 T33: 0.1550 T12: -0.0198 REMARK 3 T13: 0.0013 T23: -0.0164 REMARK 3 L TENSOR REMARK 3 L11: 0.0822 L22: 0.8358 REMARK 3 L33: 19.4315 L12: -0.1608 REMARK 3 L13: -0.1359 L23: -2.0317 REMARK 3 S TENSOR REMARK 3 S11: -0.0272 S12: -0.0586 S13: 0.0262 REMARK 3 S21: 0.2633 S22: -0.0190 S23: -0.0225 REMARK 3 S31: -0.9266 S32: 0.1467 S33: 0.0461 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : M 1 M 41 REMARK 3 ORIGIN FOR THE GROUP (A): 19.1879 10.6255 31.6234 REMARK 3 T TENSOR REMARK 3 T11: 0.0478 T22: 0.0544 REMARK 3 T33: 0.0992 T12: -0.0051 REMARK 3 T13: 0.0150 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 0.4448 L22: 1.0197 REMARK 3 L33: 17.5269 L12: 0.0515 REMARK 3 L13: 0.9845 L23: -3.1034 REMARK 3 S TENSOR REMARK 3 S11: 0.0850 S12: -0.1010 S13: 0.0244 REMARK 3 S21: 0.1742 S22: 0.0460 S23: 0.0626 REMARK 3 S31: -0.1789 S32: -0.3367 S33: -0.1310 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : M 42 M 75 REMARK 3 ORIGIN FOR THE GROUP (A): 11.4006 13.7979 28.3351 REMARK 3 T TENSOR REMARK 3 T11: 0.1228 T22: 0.1474 REMARK 3 T33: 0.1687 T12: 0.0359 REMARK 3 T13: 0.0234 T23: -0.0333 REMARK 3 L TENSOR REMARK 3 L11: 0.5043 L22: 0.5568 REMARK 3 L33: 23.1930 L12: 0.0826 REMARK 3 L13: 1.2716 L23: -2.0413 REMARK 3 S TENSOR REMARK 3 S11: -0.0244 S12: -0.1741 S13: 0.0788 REMARK 3 S21: 0.2060 S22: -0.0112 S23: 0.0969 REMARK 3 S31: -0.9380 S32: -0.6097 S33: 0.0356 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : N 1 N 41 REMARK 3 ORIGIN FOR THE GROUP (A): 14.4468 3.9992 32.3733 REMARK 3 T TENSOR REMARK 3 T11: 0.0744 T22: 0.0754 REMARK 3 T33: 0.1108 T12: -0.0177 REMARK 3 T13: 0.0211 T23: -0.0090 REMARK 3 L TENSOR REMARK 3 L11: 0.4182 L22: 0.7340 REMARK 3 L33: 19.4751 L12: -0.0991 REMARK 3 L13: 2.5108 L23: -1.6014 REMARK 3 S TENSOR REMARK 3 S11: 0.0755 S12: -0.0979 S13: -0.0074 REMARK 3 S21: 0.1715 S22: 0.1113 S23: 0.0751 REMARK 3 S31: -0.0456 S32: -0.3548 S33: -0.1867 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : N 42 N 74 REMARK 3 ORIGIN FOR THE GROUP (A): 6.3848 2.0092 27.9717 REMARK 3 T TENSOR REMARK 3 T11: 0.0901 T22: 0.1808 REMARK 3 T33: 0.1773 T12: 0.0234 REMARK 3 T13: 0.0346 T23: -0.0097 REMARK 3 L TENSOR REMARK 3 L11: 0.8645 L22: 0.4968 REMARK 3 L33: 21.2986 L12: -0.1263 REMARK 3 L13: 2.8092 L23: -1.3162 REMARK 3 S TENSOR REMARK 3 S11: -0.0524 S12: -0.2652 S13: 0.0446 REMARK 3 S21: 0.1915 S22: 0.0816 S23: 0.0536 REMARK 3 S31: -0.5530 S32: -1.1502 S33: -0.0291 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : O 1 O 41 REMARK 3 ORIGIN FOR THE GROUP (A): 14.4236 -4.2866 32.0474 REMARK 3 T TENSOR REMARK 3 T11: 0.0813 T22: 0.0664 REMARK 3 T33: 0.0955 T12: -0.0089 REMARK 3 T13: 0.0148 T23: 0.0012 REMARK 3 L TENSOR REMARK 3 L11: 0.6765 L22: 0.4480 REMARK 3 L33: 19.3893 L12: -0.1268 REMARK 3 L13: 2.6482 L23: 0.0174 REMARK 3 S TENSOR REMARK 3 S11: 0.1015 S12: -0.1360 S13: -0.0630 REMARK 3 S21: 0.1272 S22: 0.1048 S23: 0.0409 REMARK 3 S31: 0.2600 S32: -0.3093 S33: -0.2063 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : O 42 O 74 REMARK 3 ORIGIN FOR THE GROUP (A): 9.1100 -10.7193 27.9546 REMARK 3 T TENSOR REMARK 3 T11: 0.0968 T22: 0.1673 REMARK 3 T33: 0.1810 T12: -0.0284 REMARK 3 T13: 0.0290 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 0.9210 L22: 0.2972 REMARK 3 L33: 24.0195 L12: 0.1944 REMARK 3 L13: 3.2320 L23: 0.6511 REMARK 3 S TENSOR REMARK 3 S11: 0.0279 S12: -0.2822 S13: -0.0226 REMARK 3 S21: 0.1446 S22: -0.0825 S23: 0.1252 REMARK 3 S31: 0.1749 S32: -1.2312 S33: 0.0546 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3U2F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-OCT-11. REMARK 100 THE DEPOSITION ID IS D_1000068220. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25587 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 8.600 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : 0.08000 REMARK 200 FOR THE DATA SET : 13.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.4 REMARK 200 DATA REDUNDANCY IN SHELL : 7.70 REMARK 200 R MERGE FOR SHELL (I) : 0.27600 REMARK 200 R SYM FOR SHELL (I) : 0.27600 REMARK 200 FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2XOK, CHAINS K,L,M,N,O REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 68% MPD, 8% PROPYLENE GLYCOL, 0.3M REMARK 280 NACL, 0.1M MALONATE PH 7.0, 2MM MGSO4, 50MM BICINE, PH 8.3, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z+1/2 REMARK 290 4555 Y,-X,Z+1/2 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z+1/2 REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 122.98850 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 122.98850 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 122.98850 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 122.98850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 31050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -410.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: K, L, M, N, O REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 54.18400 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY K 75 REMARK 465 VAL K 76 REMARK 465 GLY L 75 REMARK 465 VAL L 76 REMARK 465 VAL M 76 REMARK 465 GLY N 75 REMARK 465 VAL N 76 REMARK 465 GLY O 75 REMARK 465 VAL O 76 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS K 8 NZ REMARK 470 PHE K 74 CG CD1 CD2 CE1 CE2 CZ REMARK 470 FME L 1 CG SD CE REMARK 470 GLN L 2 CG CD OE1 NE2 REMARK 470 LYS L 8 NZ REMARK 470 FME M 1 SD CE REMARK 470 GLN M 2 CG CD OE1 NE2 REMARK 470 LYS M 8 CE NZ REMARK 470 FME N 1 CG SD CE REMARK 470 GLN N 2 OE1 NE2 REMARK 470 LYS N 8 NZ REMARK 470 FME O 1 SD CE REMARK 470 GLN O 2 CG CD OE1 NE2 REMARK 470 LYS O 8 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN L 40 76.73 -151.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2XOK RELATED DB: PDB REMARK 900 RELATED ID: 2XQU RELATED DB: PDB REMARK 900 RELATED ID: 2X2V RELATED DB: PDB REMARK 900 RELATED ID: 2WGM RELATED DB: PDB REMARK 900 RELATED ID: 3U2Y RELATED DB: PDB REMARK 900 RELATED ID: 3U32 RELATED DB: PDB DBREF 3U2F K 1 76 UNP P61829 ATP9_YEAST 1 76 DBREF 3U2F L 1 76 UNP P61829 ATP9_YEAST 1 76 DBREF 3U2F M 1 76 UNP P61829 ATP9_YEAST 1 76 DBREF 3U2F N 1 76 UNP P61829 ATP9_YEAST 1 76 DBREF 3U2F O 1 76 UNP P61829 ATP9_YEAST 1 76 SEQRES 1 K 76 FME GLN LEU VAL LEU ALA ALA LYS TYR ILE GLY ALA GLY SEQRES 2 K 76 ILE SER THR ILE GLY LEU LEU GLY ALA GLY ILE GLY ILE SEQRES 3 K 76 ALA ILE VAL PHE ALA ALA LEU ILE ASN GLY VAL SER ARG SEQRES 4 K 76 ASN PRO SER ILE LYS ASP THR VAL PHE PRO MET ALA ILE SEQRES 5 K 76 LEU GLY PHE ALA LEU SER GLU ALA THR GLY LEU PHE CYS SEQRES 6 K 76 LEU MET VAL SER PHE LEU LEU LEU PHE GLY VAL SEQRES 1 L 76 FME GLN LEU VAL LEU ALA ALA LYS TYR ILE GLY ALA GLY SEQRES 2 L 76 ILE SER THR ILE GLY LEU LEU GLY ALA GLY ILE GLY ILE SEQRES 3 L 76 ALA ILE VAL PHE ALA ALA LEU ILE ASN GLY VAL SER ARG SEQRES 4 L 76 ASN PRO SER ILE LYS ASP THR VAL PHE PRO MET ALA ILE SEQRES 5 L 76 LEU GLY PHE ALA LEU SER GLU ALA THR GLY LEU PHE CYS SEQRES 6 L 76 LEU MET VAL SER PHE LEU LEU LEU PHE GLY VAL SEQRES 1 M 76 FME GLN LEU VAL LEU ALA ALA LYS TYR ILE GLY ALA GLY SEQRES 2 M 76 ILE SER THR ILE GLY LEU LEU GLY ALA GLY ILE GLY ILE SEQRES 3 M 76 ALA ILE VAL PHE ALA ALA LEU ILE ASN GLY VAL SER ARG SEQRES 4 M 76 ASN PRO SER ILE LYS ASP THR VAL PHE PRO MET ALA ILE SEQRES 5 M 76 LEU GLY PHE ALA LEU SER GLU ALA THR GLY LEU PHE CYS SEQRES 6 M 76 LEU MET VAL SER PHE LEU LEU LEU PHE GLY VAL SEQRES 1 N 76 FME GLN LEU VAL LEU ALA ALA LYS TYR ILE GLY ALA GLY SEQRES 2 N 76 ILE SER THR ILE GLY LEU LEU GLY ALA GLY ILE GLY ILE SEQRES 3 N 76 ALA ILE VAL PHE ALA ALA LEU ILE ASN GLY VAL SER ARG SEQRES 4 N 76 ASN PRO SER ILE LYS ASP THR VAL PHE PRO MET ALA ILE SEQRES 5 N 76 LEU GLY PHE ALA LEU SER GLU ALA THR GLY LEU PHE CYS SEQRES 6 N 76 LEU MET VAL SER PHE LEU LEU LEU PHE GLY VAL SEQRES 1 O 76 FME GLN LEU VAL LEU ALA ALA LYS TYR ILE GLY ALA GLY SEQRES 2 O 76 ILE SER THR ILE GLY LEU LEU GLY ALA GLY ILE GLY ILE SEQRES 3 O 76 ALA ILE VAL PHE ALA ALA LEU ILE ASN GLY VAL SER ARG SEQRES 4 O 76 ASN PRO SER ILE LYS ASP THR VAL PHE PRO MET ALA ILE SEQRES 5 O 76 LEU GLY PHE ALA LEU SER GLU ALA THR GLY LEU PHE CYS SEQRES 6 O 76 LEU MET VAL SER PHE LEU LEU LEU PHE GLY VAL MODRES 3U2F FME K 1 MET N-FORMYLMETHIONINE MODRES 3U2F FME L 1 MET N-FORMYLMETHIONINE MODRES 3U2F FME M 1 MET N-FORMYLMETHIONINE MODRES 3U2F FME N 1 MET N-FORMYLMETHIONINE MODRES 3U2F FME O 1 MET N-FORMYLMETHIONINE HET FME K 1 10 HET FME L 1 7 HET FME M 1 8 HET FME N 1 7 HET FME O 1 8 HETNAM FME N-FORMYLMETHIONINE FORMUL 1 FME 5(C6 H11 N O3 S) FORMUL 6 HOH *67(H2 O) HELIX 1 1 FME K 1 SER K 15 1 15 HELIX 2 2 GLY K 18 ASN K 40 1 23 HELIX 3 3 ILE K 43 PHE K 74 1 32 HELIX 4 4 GLN L 2 SER L 15 1 14 HELIX 5 5 GLY L 18 ASN L 40 1 23 HELIX 6 6 ILE L 43 PHE L 74 1 32 HELIX 7 7 GLN M 2 SER M 15 1 14 HELIX 8 8 GLY M 18 ASN M 40 1 23 HELIX 9 9 ILE M 43 GLY M 75 1 33 HELIX 10 10 GLN N 2 SER N 15 1 14 HELIX 11 11 GLY N 18 ASN N 40 1 23 HELIX 12 12 ILE N 43 PHE N 74 1 32 HELIX 13 13 GLN O 2 SER O 15 1 14 HELIX 14 14 GLY O 18 ASN O 40 1 23 HELIX 15 15 ILE O 43 PHE O 74 1 32 LINK C FME K 1 N GLN K 2 1555 1555 1.33 LINK C FME L 1 N GLN L 2 1555 1555 1.34 LINK C FME M 1 N GLN M 2 1555 1555 1.33 LINK C FME N 1 N GLN N 2 1555 1555 1.33 LINK C FME O 1 N GLN O 2 1555 1555 1.33 CRYST1 54.184 54.184 245.977 90.00 90.00 90.00 P 42 2 2 40 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018456 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018456 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004065 0.00000 HETATM 1 N FME K 1 33.000 15.124 64.368 1.00 40.72 N ANISOU 1 N FME K 1 7394 4945 3129 -558 52 -476 N HETATM 2 CN FME K 1 31.726 14.732 64.005 1.00 39.29 C ANISOU 2 CN FME K 1 7082 4694 3152 -37 115 -367 C HETATM 3 O1 FME K 1 31.498 14.137 62.959 1.00 37.77 O ANISOU 3 O1 FME K 1 6570 4595 3185 86 84 -306 O HETATM 4 CA FME K 1 33.751 15.729 63.269 1.00 41.51 C ANISOU 4 CA FME K 1 7675 4977 3117 -913 49 -548 C HETATM 5 CB FME K 1 34.832 16.648 63.822 1.00 45.53 C ANISOU 5 CB FME K 1 8602 5513 3184 -1586 45 -684 C HETATM 6 CG FME K 1 34.303 18.048 64.104 1.00 49.91 C ANISOU 6 CG FME K 1 10172 5449 3340 -1629 238 -768 C HETATM 7 SD FME K 1 35.635 19.078 64.636 1.00 57.89 S ANISOU 7 SD FME K 1 11775 6497 3723 -2660 238 -947 S HETATM 8 CE FME K 1 36.207 19.716 63.095 1.00 57.02 C ANISOU 8 CE FME K 1 11961 6249 3454 -3087 273 -1006 C HETATM 9 C FME K 1 34.431 14.657 62.468 1.00 39.06 C ANISOU 9 C FME K 1 6706 5070 3065 -956 -84 -492 C HETATM 10 O FME K 1 34.580 14.797 61.251 1.00 37.80 O ANISOU 10 O FME K 1 6536 4852 2975 -999 -79 -495 O