data_3U2N # _entry.id 3U2N # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3U2N pdb_00003u2n 10.2210/pdb3u2n/pdb NDB NA1318 ? ? RCSB RCSB068228 ? ? WWPDB D_1000068228 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-04-17 2 'Structure model' 1 1 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_struct_conn_angle 5 2 'Structure model' struct_conn 6 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_alt_id' 7 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 12 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 13 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 14 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 15 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_alt_id' 17 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 18 2 'Structure model' '_pdbx_struct_conn_angle.value' 19 2 'Structure model' '_struct_conn.pdbx_dist_value' 20 2 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 21 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 22 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 23 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 24 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 25 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 26 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 27 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 28 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 29 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 30 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 31 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 32 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 33 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 34 2 'Structure model' '_struct_conn.ptnr2_label_seq_id' 35 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 36 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 37 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3U2N _pdbx_database_status.recvd_initial_deposition_date 2011-10-04 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wei, D.G.' 1 'Neidle, S.' 2 # _citation.id primary _citation.title 'Small-molecule binding to the DNA minor groove is mediated by a conserved water cluster.' _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 135 _citation.page_first 1369 _citation.page_last 1377 _citation.year 2013 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23276263 _citation.pdbx_database_id_DOI 10.1021/ja308952y # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wei, D.' 1 ? primary 'Wilson, W.D.' 2 ? primary 'Neidle, S.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'" 3663.392 2 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 9 ? ? ? ? 3 water nat water 18.015 219 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DC)(DG)(DA)(DA)(DT)(DT)(DC)(DG)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CGCGAATTCGCG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DC n 1 4 DG n 1 5 DA n 1 6 DA n 1 7 DT n 1 8 DT n 1 9 DC n 1 10 DG n 1 11 DC n 1 12 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'This sequence occurs naturally in humans.' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DG 2 2 2 DG G A . n A 1 3 DC 3 3 3 DC C A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DA 5 5 5 DA A A . n A 1 6 DA 6 6 6 DA A A . n A 1 7 DT 7 7 7 DT T A . n A 1 8 DT 8 8 8 DT T A . n A 1 9 DC 9 9 9 DC C A . n A 1 10 DG 10 10 10 DG G A . n A 1 11 DC 11 11 11 DC C A . n A 1 12 DG 12 12 12 DG G A . n B 1 1 DC 1 13 13 DC C B . n B 1 2 DG 2 14 14 DG G B . n B 1 3 DC 3 15 15 DC C B . n B 1 4 DG 4 16 16 DG G B . n B 1 5 DA 5 17 17 DA A B . n B 1 6 DA 6 18 18 DA A B . n B 1 7 DT 7 19 19 DT T B . n B 1 8 DT 8 20 20 DT T B . n B 1 9 DC 9 21 21 DC C B . n B 1 10 DG 10 22 22 DG G B . n B 1 11 DC 11 23 23 DC C B . n B 1 12 DG 12 24 24 DG G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 13 1 MG MG A . D 2 MG 1 14 1 MG MG A . E 2 MG 1 15 1 MG MG A . F 2 MG 1 16 1 MG MG A . G 2 MG 1 1 1 MG MG B . H 2 MG 1 25 1 MG MG B . I 2 MG 1 26 1 MG MG B . J 2 MG 1 27 1 MG MG B . K 2 MG 1 28 1 MG MG B . L 3 HOH 1 17 1 HOH HOH A . L 3 HOH 2 18 18 HOH HOH A . L 3 HOH 3 19 19 HOH HOH A . L 3 HOH 4 20 20 HOH HOH A . L 3 HOH 5 21 2 HOH HOH A . L 3 HOH 6 22 3 HOH HOH A . L 3 HOH 7 23 23 HOH HOH A . L 3 HOH 8 25 25 HOH HOH A . L 3 HOH 9 26 26 HOH HOH A . L 3 HOH 10 27 5 HOH HOH A . L 3 HOH 11 28 28 HOH HOH A . L 3 HOH 12 29 29 HOH HOH A . L 3 HOH 13 31 31 HOH HOH A . L 3 HOH 14 32 32 HOH HOH A . L 3 HOH 15 33 33 HOH HOH A . L 3 HOH 16 34 34 HOH HOH A . L 3 HOH 17 35 35 HOH HOH A . L 3 HOH 18 36 36 HOH HOH A . L 3 HOH 19 37 8 HOH HOH A . L 3 HOH 20 38 38 HOH HOH A . L 3 HOH 21 39 39 HOH HOH A . L 3 HOH 22 40 40 HOH HOH A . L 3 HOH 23 41 16 HOH HOH A . L 3 HOH 24 42 3 HOH HOH A . L 3 HOH 25 43 4 HOH HOH A . L 3 HOH 26 44 8 HOH HOH A . L 3 HOH 27 45 45 HOH HOH A . L 3 HOH 28 46 9 HOH HOH A . L 3 HOH 29 47 47 HOH HOH A . L 3 HOH 30 48 1 HOH HOH A . L 3 HOH 31 49 4 HOH HOH A . L 3 HOH 32 50 1 HOH HOH A . L 3 HOH 33 51 51 HOH HOH A . L 3 HOH 34 53 53 HOH HOH A . L 3 HOH 35 54 54 HOH HOH A . L 3 HOH 36 56 56 HOH HOH A . L 3 HOH 37 57 57 HOH HOH A . L 3 HOH 38 58 58 HOH HOH A . L 3 HOH 39 59 59 HOH HOH A . L 3 HOH 40 60 60 HOH HOH A . L 3 HOH 41 61 61 HOH HOH A . L 3 HOH 42 63 63 HOH HOH A . L 3 HOH 43 64 64 HOH HOH A . L 3 HOH 44 66 66 HOH HOH A . L 3 HOH 45 67 67 HOH HOH A . L 3 HOH 46 68 68 HOH HOH A . L 3 HOH 47 69 69 HOH HOH A . L 3 HOH 48 71 71 HOH HOH A . L 3 HOH 49 72 72 HOH HOH A . L 3 HOH 50 73 73 HOH HOH A . L 3 HOH 51 77 77 HOH HOH A . L 3 HOH 52 78 78 HOH HOH A . L 3 HOH 53 90 90 HOH HOH A . L 3 HOH 54 92 92 HOH HOH A . L 3 HOH 55 94 94 HOH HOH A . L 3 HOH 56 95 95 HOH HOH A . L 3 HOH 57 97 97 HOH HOH A . L 3 HOH 58 100 100 HOH HOH A . L 3 HOH 59 102 102 HOH HOH A . L 3 HOH 60 105 105 HOH HOH A . L 3 HOH 61 106 106 HOH HOH A . L 3 HOH 62 107 107 HOH HOH A . L 3 HOH 63 108 108 HOH HOH A . L 3 HOH 64 110 110 HOH HOH A . L 3 HOH 65 112 112 HOH HOH A . L 3 HOH 66 113 113 HOH HOH A . L 3 HOH 67 116 116 HOH HOH A . L 3 HOH 68 117 117 HOH HOH A . L 3 HOH 69 119 119 HOH HOH A . L 3 HOH 70 121 121 HOH HOH A . L 3 HOH 71 128 128 HOH HOH A . L 3 HOH 72 129 129 HOH HOH A . L 3 HOH 73 132 132 HOH HOH A . L 3 HOH 74 133 133 HOH HOH A . L 3 HOH 75 134 134 HOH HOH A . L 3 HOH 76 135 135 HOH HOH A . L 3 HOH 77 136 136 HOH HOH A . L 3 HOH 78 139 139 HOH HOH A . L 3 HOH 79 140 140 HOH HOH A . L 3 HOH 80 141 141 HOH HOH A . L 3 HOH 81 145 145 HOH HOH A . L 3 HOH 82 146 146 HOH HOH A . L 3 HOH 83 150 150 HOH HOH A . L 3 HOH 84 152 152 HOH HOH A . L 3 HOH 85 153 153 HOH HOH A . L 3 HOH 86 154 154 HOH HOH A . L 3 HOH 87 155 155 HOH HOH A . L 3 HOH 88 158 158 HOH HOH A . L 3 HOH 89 159 159 HOH HOH A . L 3 HOH 90 163 163 HOH HOH A . L 3 HOH 91 170 170 HOH HOH A . L 3 HOH 92 173 173 HOH HOH A . L 3 HOH 93 174 174 HOH HOH A . L 3 HOH 94 175 175 HOH HOH A . L 3 HOH 95 176 176 HOH HOH A . L 3 HOH 96 186 186 HOH HOH A . L 3 HOH 97 189 189 HOH HOH A . L 3 HOH 98 190 190 HOH HOH A . L 3 HOH 99 191 191 HOH HOH A . L 3 HOH 100 192 192 HOH HOH A . L 3 HOH 101 194 194 HOH HOH A . L 3 HOH 102 199 199 HOH HOH A . L 3 HOH 103 204 204 HOH HOH A . L 3 HOH 104 208 208 HOH HOH A . L 3 HOH 105 209 209 HOH HOH A . L 3 HOH 106 211 211 HOH HOH A . M 3 HOH 1 2 2 HOH HOH B . M 3 HOH 2 3 3 HOH HOH B . M 3 HOH 3 4 4 HOH HOH B . M 3 HOH 4 5 5 HOH HOH B . M 3 HOH 5 6 6 HOH HOH B . M 3 HOH 6 7 7 HOH HOH B . M 3 HOH 7 9 9 HOH HOH B . M 3 HOH 8 10 10 HOH HOH B . M 3 HOH 9 11 11 HOH HOH B . M 3 HOH 10 12 12 HOH HOH B . M 3 HOH 11 29 13 HOH HOH B . M 3 HOH 12 30 30 HOH HOH B . M 3 HOH 13 31 15 HOH HOH B . M 3 HOH 14 32 17 HOH HOH B . M 3 HOH 15 33 21 HOH HOH B . M 3 HOH 16 34 22 HOH HOH B . M 3 HOH 17 35 24 HOH HOH B . M 3 HOH 18 36 27 HOH HOH B . M 3 HOH 19 37 37 HOH HOH B . M 3 HOH 20 38 1 HOH HOH B . M 3 HOH 21 39 2 HOH HOH B . M 3 HOH 22 40 6 HOH HOH B . M 3 HOH 23 41 41 HOH HOH B . M 3 HOH 24 42 42 HOH HOH B . M 3 HOH 25 43 43 HOH HOH B . M 3 HOH 26 44 44 HOH HOH B . M 3 HOH 27 45 2 HOH HOH B . M 3 HOH 28 46 46 HOH HOH B . M 3 HOH 29 47 4 HOH HOH B . M 3 HOH 30 48 48 HOH HOH B . M 3 HOH 31 49 14 HOH HOH B . M 3 HOH 32 50 50 HOH HOH B . M 3 HOH 33 52 52 HOH HOH B . M 3 HOH 34 55 55 HOH HOH B . M 3 HOH 35 62 62 HOH HOH B . M 3 HOH 36 65 65 HOH HOH B . M 3 HOH 37 70 70 HOH HOH B . M 3 HOH 38 74 74 HOH HOH B . M 3 HOH 39 75 75 HOH HOH B . M 3 HOH 40 76 76 HOH HOH B . M 3 HOH 41 79 79 HOH HOH B . M 3 HOH 42 80 80 HOH HOH B . M 3 HOH 43 81 81 HOH HOH B . M 3 HOH 44 82 82 HOH HOH B . M 3 HOH 45 83 83 HOH HOH B . M 3 HOH 46 84 84 HOH HOH B . M 3 HOH 47 85 85 HOH HOH B . M 3 HOH 48 86 86 HOH HOH B . M 3 HOH 49 87 87 HOH HOH B . M 3 HOH 50 88 88 HOH HOH B . M 3 HOH 51 91 91 HOH HOH B . M 3 HOH 52 93 93 HOH HOH B . M 3 HOH 53 96 96 HOH HOH B . M 3 HOH 54 99 99 HOH HOH B . M 3 HOH 55 101 101 HOH HOH B . M 3 HOH 56 103 103 HOH HOH B . M 3 HOH 57 104 104 HOH HOH B . M 3 HOH 58 109 109 HOH HOH B . M 3 HOH 59 114 114 HOH HOH B . M 3 HOH 60 115 115 HOH HOH B . M 3 HOH 61 118 118 HOH HOH B . M 3 HOH 62 120 120 HOH HOH B . M 3 HOH 63 122 122 HOH HOH B . M 3 HOH 64 123 123 HOH HOH B . M 3 HOH 65 124 124 HOH HOH B . M 3 HOH 66 125 125 HOH HOH B . M 3 HOH 67 126 126 HOH HOH B . M 3 HOH 68 127 127 HOH HOH B . M 3 HOH 69 130 130 HOH HOH B . M 3 HOH 70 131 131 HOH HOH B . M 3 HOH 71 137 137 HOH HOH B . M 3 HOH 72 138 138 HOH HOH B . M 3 HOH 73 142 142 HOH HOH B . M 3 HOH 74 143 143 HOH HOH B . M 3 HOH 75 144 144 HOH HOH B . M 3 HOH 76 148 148 HOH HOH B . M 3 HOH 77 149 149 HOH HOH B . M 3 HOH 78 151 151 HOH HOH B . M 3 HOH 79 156 156 HOH HOH B . M 3 HOH 80 157 157 HOH HOH B . M 3 HOH 81 160 160 HOH HOH B . M 3 HOH 82 161 161 HOH HOH B . M 3 HOH 83 162 162 HOH HOH B . M 3 HOH 84 164 164 HOH HOH B . M 3 HOH 85 165 165 HOH HOH B . M 3 HOH 86 166 166 HOH HOH B . M 3 HOH 87 167 167 HOH HOH B . M 3 HOH 88 168 168 HOH HOH B . M 3 HOH 89 169 169 HOH HOH B . M 3 HOH 90 171 171 HOH HOH B . M 3 HOH 91 172 172 HOH HOH B . M 3 HOH 92 177 177 HOH HOH B . M 3 HOH 93 178 178 HOH HOH B . M 3 HOH 94 179 179 HOH HOH B . M 3 HOH 95 180 180 HOH HOH B . M 3 HOH 96 181 181 HOH HOH B . M 3 HOH 97 182 182 HOH HOH B . M 3 HOH 98 183 183 HOH HOH B . M 3 HOH 99 184 184 HOH HOH B . M 3 HOH 100 187 187 HOH HOH B . M 3 HOH 101 188 188 HOH HOH B . M 3 HOH 102 195 195 HOH HOH B . M 3 HOH 103 196 196 HOH HOH B . M 3 HOH 104 197 197 HOH HOH B . M 3 HOH 105 198 198 HOH HOH B . M 3 HOH 106 200 200 HOH HOH B . M 3 HOH 107 201 201 HOH HOH B . M 3 HOH 108 202 202 HOH HOH B . M 3 HOH 109 203 203 HOH HOH B . M 3 HOH 110 205 205 HOH HOH B . M 3 HOH 111 206 206 HOH HOH B . M 3 HOH 112 207 207 HOH HOH B . M 3 HOH 113 212 212 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DNA 'data collection' . ? 1 PHASES phasing . ? 2 REFMAC refinement 5.5.0109 ? 3 xia2 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _cell.entry_id 3U2N _cell.length_a 23.920 _cell.length_b 39.640 _cell.length_c 65.390 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3U2N _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3U2N _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.12 _exptl_crystal.density_percent_sol 41.86 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 283 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'MAGNESIUM CHLORIDE, DNA, MPD, SODIUM CACODYLATE BUFFER, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 283K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.pdbx_collection_date 2011-07-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I03' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I03 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9795 # _reflns.entry_id 3U2N _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 39.64 _reflns.d_resolution_high 1.07 _reflns.number_obs 38536 _reflns.number_all 52868 _reflns.percent_possible_obs 72.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.07 1.1 2.6 ? ? ? ? ? 3901 ? ? ? ? 1 1 1.1 1.13 19.5 ? ? ? ? ? 3862 ? ? ? ? 2 1 1.13 1.16 34.5 ? ? ? ? ? 3663 ? ? ? ? 3 1 1.16 1.2 47.9 ? ? ? ? ? 3632 ? ? ? ? 4 1 1.2 1.24 65 ? ? ? ? ? 3451 ? ? ? ? 5 1 1.24 1.28 80 ? ? ? ? ? 3373 ? ? ? ? 6 1 # _refine.entry_id 3U2N _refine.ls_number_reflns_obs 16498 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 15.26 _refine.ls_d_res_high 1.25 _refine.ls_percent_reflns_obs 100.00 _refine.ls_R_factor_obs 0.19500 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19258 _refine.ls_R_factor_R_free 0.23892 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 880 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.961 _refine.correlation_coeff_Fo_to_Fc_free 0.934 _refine.B_iso_mean 18.920 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.063 _refine.overall_SU_ML 0.043 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 0.996 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 486 _refine_hist.pdbx_number_atoms_ligand 9 _refine_hist.number_atoms_solvent 219 _refine_hist.number_atoms_total 714 _refine_hist.d_res_high 1.25 _refine_hist.d_res_low 15.26 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.007 0.021 ? 545 ? 'X-RAY DIFFRACTION' r_bond_other_d ? ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.214 3.000 ? 837 ? 'X-RAY DIFFRACTION' r_angle_other_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_chiral_restr 0.059 0.200 ? 94 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.030 0.020 ? 252 ? 'X-RAY DIFFRACTION' r_gen_planes_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_it 1.743 3.000 ? 545 ? 'X-RAY DIFFRACTION' r_scangle_it 2.448 4.500 ? 837 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.247 _refine_ls_shell.d_res_low 1.279 _refine_ls_shell.number_reflns_R_work 1091 _refine_ls_shell.R_factor_R_work 0.319 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.367 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 63 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3U2N _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3U2N _struct.title 'Crystal structure of DNA(CGCGAATTCGCG)2 at 1.25 angstroms' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3U2N _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'double helix, Mg2+, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? K N N 2 ? L N N 3 ? M N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3U2N _struct_ref.pdbx_db_accession 3U2N _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code CGCGAATTCGCG _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3U2N A 1 ? 12 ? 3U2N 1 ? 12 ? 1 12 2 1 3U2N B 1 ? 12 ? 3U2N 13 ? 24 ? 13 24 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1720 ? 1 MORE -43 ? 1 'SSA (A^2)' 4860 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 4 OP2 ? ? ? 1_555 F MG . MG ? ? A DG 4 A MG 16 1_555 ? ? ? ? ? ? ? 2.065 ? ? metalc2 metalc ? ? C MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 13 A HOH 20 1_555 ? ? ? ? ? ? ? 2.021 ? ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 13 A HOH 37 1_555 ? ? ? ? ? ? ? 2.070 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 13 B HOH 11 1_555 ? ? ? ? ? ? ? 2.055 ? ? metalc5 metalc ? ? D MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 14 A HOH 119 1_555 ? ? ? ? ? ? ? 1.925 ? ? metalc6 metalc ? ? D MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 14 A HOH 128 1_555 ? ? ? ? ? ? ? 2.011 ? ? metalc7 metalc ? ? D MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 14 A HOH 155 1_555 ? ? ? ? ? ? ? 2.088 ? ? metalc8 metalc ? ? D MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 14 A HOH 159 1_555 ? ? ? ? ? ? ? 2.290 ? ? metalc9 metalc ? ? D MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 14 B HOH 74 1_555 ? ? ? ? ? ? ? 2.079 ? ? metalc10 metalc ? ? D MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 14 B HOH 109 1_555 ? ? ? ? ? ? ? 2.116 ? ? metalc11 metalc ? ? E MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 15 A HOH 135 1_555 ? ? ? ? ? ? ? 1.916 ? ? metalc12 metalc ? ? E MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 15 A HOH 158 1_555 ? ? ? ? ? ? ? 1.764 ? ? metalc13 metalc ? ? E MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 15 B HOH 70 1_555 ? ? ? ? ? ? ? 2.265 ? ? metalc14 metalc ? ? F MG . MG ? ? ? 1_555 L HOH . O B ? A MG 16 A HOH 23 1_555 ? ? ? ? ? ? ? 2.852 ? ? metalc15 metalc ? ? F MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 16 A HOH 189 1_555 ? ? ? ? ? ? ? 2.235 ? ? metalc16 metalc ? ? F MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 16 A HOH 190 1_555 ? ? ? ? ? ? ? 2.159 ? ? metalc17 metalc ? ? G MG . MG ? ? ? 1_555 B DT 7 OP1 ? ? B MG 1 B DT 19 1_555 ? ? ? ? ? ? ? 2.061 ? ? metalc18 metalc ? ? G MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 1 B HOH 55 1_555 ? ? ? ? ? ? ? 2.182 ? ? metalc19 metalc ? ? G MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 1 B HOH 62 1_555 ? ? ? ? ? ? ? 2.089 ? ? metalc20 metalc ? ? B DG 4 OP2 ? ? ? 1_555 I MG . MG ? ? B DG 16 B MG 26 1_555 ? ? ? ? ? ? ? 1.899 ? ? metalc21 metalc ? ? B DA 5 OP1 ? ? ? 1_555 H MG . MG ? ? B DA 17 B MG 25 1_555 ? ? ? ? ? ? ? 1.888 ? ? metalc22 metalc ? ? B DC 9 OP1 ? ? ? 1_555 J MG . MG ? ? B DC 21 B MG 27 1_555 ? ? ? ? ? ? ? 2.204 ? ? metalc23 metalc ? ? H MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 25 B HOH 120 1_555 ? ? ? ? ? ? ? 2.266 ? ? metalc24 metalc ? ? H MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 25 B HOH 131 1_555 ? ? ? ? ? ? ? 2.230 ? ? metalc25 metalc ? ? H MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 25 B HOH 166 1_555 ? ? ? ? ? ? ? 2.345 ? ? metalc26 metalc ? ? H MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 25 B HOH 167 1_555 ? ? ? ? ? ? ? 2.046 ? ? metalc27 metalc ? ? H MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 25 B HOH 171 1_555 ? ? ? ? ? ? ? 2.253 ? ? metalc28 metalc ? ? I MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 26 B HOH 178 1_555 ? ? ? ? ? ? ? 2.054 ? ? metalc29 metalc ? ? I MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 26 B HOH 179 1_555 ? ? ? ? ? ? ? 2.051 ? ? metalc30 metalc ? ? I MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 26 B HOH 180 1_555 ? ? ? ? ? ? ? 2.293 ? ? metalc31 metalc ? ? I MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 26 B HOH 181 1_555 ? ? ? ? ? ? ? 2.571 ? ? metalc32 metalc ? ? I MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 26 B HOH 182 1_555 ? ? ? ? ? ? ? 2.178 ? ? metalc33 metalc ? ? J MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 27 B HOH 187 1_555 ? ? ? ? ? ? ? 1.775 ? ? metalc34 metalc ? ? J MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 27 B HOH 188 1_555 ? ? ? ? ? ? ? 2.000 ? ? metalc35 metalc ? ? J MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 27 B HOH 195 1_555 ? ? ? ? ? ? ? 2.312 ? ? metalc36 metalc ? ? J MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 27 B HOH 196 1_555 ? ? ? ? ? ? ? 2.200 ? ? metalc37 metalc ? ? J MG . MG ? ? ? 1_555 M HOH . O A ? B MG 27 B HOH 197 1_555 ? ? ? ? ? ? ? 2.011 ? ? metalc38 metalc ? ? K MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 28 B HOH 85 1_555 ? ? ? ? ? ? ? 2.013 ? ? metalc39 metalc ? ? K MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 28 B HOH 118 1_555 ? ? ? ? ? ? ? 2.652 ? ? metalc40 metalc ? ? K MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 28 B HOH 201 1_555 ? ? ? ? ? ? ? 1.971 ? ? metalc41 metalc ? ? K MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 28 B HOH 202 1_555 ? ? ? ? ? ? ? 2.318 ? ? metalc42 metalc ? ? K MG . MG ? ? ? 1_555 M HOH . O ? ? B MG 28 B HOH 203 1_555 ? ? ? ? ? ? ? 2.136 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 12 N1 ? ? A DC 1 B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 12 O6 ? ? A DC 1 B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 12 N2 ? ? A DC 1 B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 11 N3 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 11 O2 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 11 N4 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 9 N3 ? ? A DG 4 B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 9 O2 ? ? A DG 4 B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 9 N4 ? ? A DG 4 B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 8 N3 ? ? A DA 5 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 8 O4 ? ? A DA 5 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 7 N3 ? ? A DA 6 B DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 7 O4 ? ? A DA 6 B DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 6 N1 ? ? A DT 7 B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 6 N6 ? ? A DT 7 B DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 5 N1 ? ? A DT 8 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 5 N6 ? ? A DT 8 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 9 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 9 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 9 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 10 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 10 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 10 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 12 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 12 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 12 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP2 ? A DG 4 ? A DG 4 ? 1_555 MG ? F MG . ? A MG 16 ? 1_555 O B L HOH . ? A HOH 23 ? 1_555 118.6 ? 2 OP2 ? A DG 4 ? A DG 4 ? 1_555 MG ? F MG . ? A MG 16 ? 1_555 O ? L HOH . ? A HOH 189 ? 1_555 88.2 ? 3 O B L HOH . ? A HOH 23 ? 1_555 MG ? F MG . ? A MG 16 ? 1_555 O ? L HOH . ? A HOH 189 ? 1_555 131.9 ? 4 OP2 ? A DG 4 ? A DG 4 ? 1_555 MG ? F MG . ? A MG 16 ? 1_555 O ? L HOH . ? A HOH 190 ? 1_555 91.4 ? 5 O B L HOH . ? A HOH 23 ? 1_555 MG ? F MG . ? A MG 16 ? 1_555 O ? L HOH . ? A HOH 190 ? 1_555 126.6 ? 6 O ? L HOH . ? A HOH 189 ? 1_555 MG ? F MG . ? A MG 16 ? 1_555 O ? L HOH . ? A HOH 190 ? 1_555 88.2 ? 7 O ? L HOH . ? A HOH 20 ? 1_555 MG ? C MG . ? A MG 13 ? 1_555 O ? L HOH . ? A HOH 37 ? 1_555 90.4 ? 8 O ? L HOH . ? A HOH 20 ? 1_555 MG ? C MG . ? A MG 13 ? 1_555 O ? M HOH . ? B HOH 11 ? 1_555 94.9 ? 9 O ? L HOH . ? A HOH 37 ? 1_555 MG ? C MG . ? A MG 13 ? 1_555 O ? M HOH . ? B HOH 11 ? 1_555 87.3 ? 10 O ? L HOH . ? A HOH 119 ? 1_555 MG ? D MG . ? A MG 14 ? 1_555 O ? L HOH . ? A HOH 128 ? 1_555 95.2 ? 11 O ? L HOH . ? A HOH 119 ? 1_555 MG ? D MG . ? A MG 14 ? 1_555 O ? L HOH . ? A HOH 155 ? 1_555 155.2 ? 12 O ? L HOH . ? A HOH 128 ? 1_555 MG ? D MG . ? A MG 14 ? 1_555 O ? L HOH . ? A HOH 155 ? 1_555 86.4 ? 13 O ? L HOH . ? A HOH 119 ? 1_555 MG ? D MG . ? A MG 14 ? 1_555 O ? L HOH . ? A HOH 159 ? 1_555 78.5 ? 14 O ? L HOH . ? A HOH 128 ? 1_555 MG ? D MG . ? A MG 14 ? 1_555 O ? L HOH . ? A HOH 159 ? 1_555 86.6 ? 15 O ? L HOH . ? A HOH 155 ? 1_555 MG ? D MG . ? A MG 14 ? 1_555 O ? L HOH . ? A HOH 159 ? 1_555 76.9 ? 16 O ? L HOH . ? A HOH 119 ? 1_555 MG ? D MG . ? A MG 14 ? 1_555 O ? M HOH . ? B HOH 74 ? 1_555 91.5 ? 17 O ? L HOH . ? A HOH 128 ? 1_555 MG ? D MG . ? A MG 14 ? 1_555 O ? M HOH . ? B HOH 74 ? 1_555 168.8 ? 18 O ? L HOH . ? A HOH 155 ? 1_555 MG ? D MG . ? A MG 14 ? 1_555 O ? M HOH . ? B HOH 74 ? 1_555 83.7 ? 19 O ? L HOH . ? A HOH 159 ? 1_555 MG ? D MG . ? A MG 14 ? 1_555 O ? M HOH . ? B HOH 74 ? 1_555 86.0 ? 20 O ? L HOH . ? A HOH 119 ? 1_555 MG ? D MG . ? A MG 14 ? 1_555 O ? M HOH . ? B HOH 109 ? 1_555 97.7 ? 21 O ? L HOH . ? A HOH 128 ? 1_555 MG ? D MG . ? A MG 14 ? 1_555 O ? M HOH . ? B HOH 109 ? 1_555 94.7 ? 22 O ? L HOH . ? A HOH 155 ? 1_555 MG ? D MG . ? A MG 14 ? 1_555 O ? M HOH . ? B HOH 109 ? 1_555 106.8 ? 23 O ? L HOH . ? A HOH 159 ? 1_555 MG ? D MG . ? A MG 14 ? 1_555 O ? M HOH . ? B HOH 109 ? 1_555 176.1 ? 24 O ? M HOH . ? B HOH 74 ? 1_555 MG ? D MG . ? A MG 14 ? 1_555 O ? M HOH . ? B HOH 109 ? 1_555 93.3 ? 25 O ? L HOH . ? A HOH 135 ? 1_555 MG ? E MG . ? A MG 15 ? 1_555 O ? L HOH . ? A HOH 158 ? 1_555 93.6 ? 26 O ? L HOH . ? A HOH 135 ? 1_555 MG ? E MG . ? A MG 15 ? 1_555 O ? M HOH . ? B HOH 70 ? 1_555 85.5 ? 27 O ? L HOH . ? A HOH 158 ? 1_555 MG ? E MG . ? A MG 15 ? 1_555 O ? M HOH . ? B HOH 70 ? 1_555 167.7 ? 28 OP1 ? B DT 7 ? B DT 19 ? 1_555 MG ? G MG . ? B MG 1 ? 1_555 O ? M HOH . ? B HOH 55 ? 1_555 90.0 ? 29 OP1 ? B DT 7 ? B DT 19 ? 1_555 MG ? G MG . ? B MG 1 ? 1_555 O ? M HOH . ? B HOH 62 ? 1_555 96.9 ? 30 O ? M HOH . ? B HOH 55 ? 1_555 MG ? G MG . ? B MG 1 ? 1_555 O ? M HOH . ? B HOH 62 ? 1_555 88.1 ? 31 OP2 ? B DG 4 ? B DG 16 ? 1_555 MG ? I MG . ? B MG 26 ? 1_555 O ? M HOH . ? B HOH 178 ? 1_555 89.8 ? 32 OP2 ? B DG 4 ? B DG 16 ? 1_555 MG ? I MG . ? B MG 26 ? 1_555 O ? M HOH . ? B HOH 179 ? 1_555 92.2 ? 33 O ? M HOH . ? B HOH 178 ? 1_555 MG ? I MG . ? B MG 26 ? 1_555 O ? M HOH . ? B HOH 179 ? 1_555 91.0 ? 34 OP2 ? B DG 4 ? B DG 16 ? 1_555 MG ? I MG . ? B MG 26 ? 1_555 O ? M HOH . ? B HOH 180 ? 1_555 88.2 ? 35 O ? M HOH . ? B HOH 178 ? 1_555 MG ? I MG . ? B MG 26 ? 1_555 O ? M HOH . ? B HOH 180 ? 1_555 174.8 ? 36 O ? M HOH . ? B HOH 179 ? 1_555 MG ? I MG . ? B MG 26 ? 1_555 O ? M HOH . ? B HOH 180 ? 1_555 93.9 ? 37 OP2 ? B DG 4 ? B DG 16 ? 1_555 MG ? I MG . ? B MG 26 ? 1_555 O ? M HOH . ? B HOH 181 ? 1_555 143.3 ? 38 O ? M HOH . ? B HOH 178 ? 1_555 MG ? I MG . ? B MG 26 ? 1_555 O ? M HOH . ? B HOH 181 ? 1_555 120.9 ? 39 O ? M HOH . ? B HOH 179 ? 1_555 MG ? I MG . ? B MG 26 ? 1_555 O ? M HOH . ? B HOH 181 ? 1_555 69.5 ? 40 O ? M HOH . ? B HOH 180 ? 1_555 MG ? I MG . ? B MG 26 ? 1_555 O ? M HOH . ? B HOH 181 ? 1_555 62.7 ? 41 OP2 ? B DG 4 ? B DG 16 ? 1_555 MG ? I MG . ? B MG 26 ? 1_555 O ? M HOH . ? B HOH 182 ? 1_555 90.8 ? 42 O ? M HOH . ? B HOH 178 ? 1_555 MG ? I MG . ? B MG 26 ? 1_555 O ? M HOH . ? B HOH 182 ? 1_555 91.4 ? 43 O ? M HOH . ? B HOH 179 ? 1_555 MG ? I MG . ? B MG 26 ? 1_555 O ? M HOH . ? B HOH 182 ? 1_555 176.2 ? 44 O ? M HOH . ? B HOH 180 ? 1_555 MG ? I MG . ? B MG 26 ? 1_555 O ? M HOH . ? B HOH 182 ? 1_555 83.9 ? 45 O ? M HOH . ? B HOH 181 ? 1_555 MG ? I MG . ? B MG 26 ? 1_555 O ? M HOH . ? B HOH 182 ? 1_555 106.7 ? 46 OP1 ? B DA 5 ? B DA 17 ? 1_555 MG ? H MG . ? B MG 25 ? 1_555 O ? M HOH . ? B HOH 120 ? 1_555 92.7 ? 47 OP1 ? B DA 5 ? B DA 17 ? 1_555 MG ? H MG . ? B MG 25 ? 1_555 O ? M HOH . ? B HOH 131 ? 1_555 101.4 ? 48 O ? M HOH . ? B HOH 120 ? 1_555 MG ? H MG . ? B MG 25 ? 1_555 O ? M HOH . ? B HOH 131 ? 1_555 80.5 ? 49 OP1 ? B DA 5 ? B DA 17 ? 1_555 MG ? H MG . ? B MG 25 ? 1_555 O ? M HOH . ? B HOH 166 ? 1_555 90.9 ? 50 O ? M HOH . ? B HOH 120 ? 1_555 MG ? H MG . ? B MG 25 ? 1_555 O ? M HOH . ? B HOH 166 ? 1_555 90.8 ? 51 O ? M HOH . ? B HOH 131 ? 1_555 MG ? H MG . ? B MG 25 ? 1_555 O ? M HOH . ? B HOH 166 ? 1_555 165.2 ? 52 OP1 ? B DA 5 ? B DA 17 ? 1_555 MG ? H MG . ? B MG 25 ? 1_555 O ? M HOH . ? B HOH 167 ? 1_555 88.1 ? 53 O ? M HOH . ? B HOH 120 ? 1_555 MG ? H MG . ? B MG 25 ? 1_555 O ? M HOH . ? B HOH 167 ? 1_555 171.5 ? 54 O ? M HOH . ? B HOH 131 ? 1_555 MG ? H MG . ? B MG 25 ? 1_555 O ? M HOH . ? B HOH 167 ? 1_555 91.1 ? 55 O ? M HOH . ? B HOH 166 ? 1_555 MG ? H MG . ? B MG 25 ? 1_555 O ? M HOH . ? B HOH 167 ? 1_555 97.7 ? 56 OP1 ? B DA 5 ? B DA 17 ? 1_555 MG ? H MG . ? B MG 25 ? 1_555 O ? M HOH . ? B HOH 171 ? 1_555 171.4 ? 57 O ? M HOH . ? B HOH 120 ? 1_555 MG ? H MG . ? B MG 25 ? 1_555 O ? M HOH . ? B HOH 171 ? 1_555 85.9 ? 58 O ? M HOH . ? B HOH 131 ? 1_555 MG ? H MG . ? B MG 25 ? 1_555 O ? M HOH . ? B HOH 171 ? 1_555 86.7 ? 59 O ? M HOH . ? B HOH 166 ? 1_555 MG ? H MG . ? B MG 25 ? 1_555 O ? M HOH . ? B HOH 171 ? 1_555 80.7 ? 60 O ? M HOH . ? B HOH 167 ? 1_555 MG ? H MG . ? B MG 25 ? 1_555 O ? M HOH . ? B HOH 171 ? 1_555 94.5 ? 61 OP1 ? B DC 9 ? B DC 21 ? 1_555 MG ? J MG . ? B MG 27 ? 1_555 O ? M HOH . ? B HOH 187 ? 1_555 91.7 ? 62 OP1 ? B DC 9 ? B DC 21 ? 1_555 MG ? J MG . ? B MG 27 ? 1_555 O ? M HOH . ? B HOH 188 ? 1_555 166.2 ? 63 O ? M HOH . ? B HOH 187 ? 1_555 MG ? J MG . ? B MG 27 ? 1_555 O ? M HOH . ? B HOH 188 ? 1_555 89.8 ? 64 OP1 ? B DC 9 ? B DC 21 ? 1_555 MG ? J MG . ? B MG 27 ? 1_555 O ? M HOH . ? B HOH 195 ? 1_555 82.9 ? 65 O ? M HOH . ? B HOH 187 ? 1_555 MG ? J MG . ? B MG 27 ? 1_555 O ? M HOH . ? B HOH 195 ? 1_555 173.9 ? 66 O ? M HOH . ? B HOH 188 ? 1_555 MG ? J MG . ? B MG 27 ? 1_555 O ? M HOH . ? B HOH 195 ? 1_555 94.7 ? 67 OP1 ? B DC 9 ? B DC 21 ? 1_555 MG ? J MG . ? B MG 27 ? 1_555 O ? M HOH . ? B HOH 196 ? 1_555 85.8 ? 68 O ? M HOH . ? B HOH 187 ? 1_555 MG ? J MG . ? B MG 27 ? 1_555 O ? M HOH . ? B HOH 196 ? 1_555 85.0 ? 69 O ? M HOH . ? B HOH 188 ? 1_555 MG ? J MG . ? B MG 27 ? 1_555 O ? M HOH . ? B HOH 196 ? 1_555 80.7 ? 70 O ? M HOH . ? B HOH 195 ? 1_555 MG ? J MG . ? B MG 27 ? 1_555 O ? M HOH . ? B HOH 196 ? 1_555 91.7 ? 71 OP1 ? B DC 9 ? B DC 21 ? 1_555 MG ? J MG . ? B MG 27 ? 1_555 O A M HOH . ? B HOH 197 ? 1_555 88.6 ? 72 O ? M HOH . ? B HOH 187 ? 1_555 MG ? J MG . ? B MG 27 ? 1_555 O A M HOH . ? B HOH 197 ? 1_555 89.0 ? 73 O ? M HOH . ? B HOH 188 ? 1_555 MG ? J MG . ? B MG 27 ? 1_555 O A M HOH . ? B HOH 197 ? 1_555 105.1 ? 74 O ? M HOH . ? B HOH 195 ? 1_555 MG ? J MG . ? B MG 27 ? 1_555 O A M HOH . ? B HOH 197 ? 1_555 93.8 ? 75 O ? M HOH . ? B HOH 196 ? 1_555 MG ? J MG . ? B MG 27 ? 1_555 O A M HOH . ? B HOH 197 ? 1_555 171.7 ? 76 O ? M HOH . ? B HOH 85 ? 1_555 MG ? K MG . ? B MG 28 ? 1_555 O ? M HOH . ? B HOH 118 ? 1_555 101.7 ? 77 O ? M HOH . ? B HOH 85 ? 1_555 MG ? K MG . ? B MG 28 ? 1_555 O ? M HOH . ? B HOH 201 ? 1_555 82.3 ? 78 O ? M HOH . ? B HOH 118 ? 1_555 MG ? K MG . ? B MG 28 ? 1_555 O ? M HOH . ? B HOH 201 ? 1_555 89.6 ? 79 O ? M HOH . ? B HOH 85 ? 1_555 MG ? K MG . ? B MG 28 ? 1_555 O ? M HOH . ? B HOH 202 ? 1_555 88.4 ? 80 O ? M HOH . ? B HOH 118 ? 1_555 MG ? K MG . ? B MG 28 ? 1_555 O ? M HOH . ? B HOH 202 ? 1_555 66.8 ? 81 O ? M HOH . ? B HOH 201 ? 1_555 MG ? K MG . ? B MG 28 ? 1_555 O ? M HOH . ? B HOH 202 ? 1_555 152.4 ? 82 O ? M HOH . ? B HOH 85 ? 1_555 MG ? K MG . ? B MG 28 ? 1_555 O ? M HOH . ? B HOH 203 ? 1_555 171.2 ? 83 O ? M HOH . ? B HOH 118 ? 1_555 MG ? K MG . ? B MG 28 ? 1_555 O ? M HOH . ? B HOH 203 ? 1_555 71.8 ? 84 O ? M HOH . ? B HOH 201 ? 1_555 MG ? K MG . ? B MG 28 ? 1_555 O ? M HOH . ? B HOH 203 ? 1_555 103.4 ? 85 O ? M HOH . ? B HOH 202 ? 1_555 MG ? K MG . ? B MG 28 ? 1_555 O ? M HOH . ? B HOH 203 ? 1_555 83.5 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 13 ? 6 'BINDING SITE FOR RESIDUE MG A 13' AC2 Software A MG 14 ? 6 'BINDING SITE FOR RESIDUE MG A 14' AC3 Software A MG 15 ? 6 'BINDING SITE FOR RESIDUE MG A 15' AC4 Software A MG 16 ? 6 'BINDING SITE FOR RESIDUE MG A 16' AC5 Software B MG 1 ? 6 'BINDING SITE FOR RESIDUE MG B 1' AC6 Software B MG 25 ? 6 'BINDING SITE FOR RESIDUE MG B 25' AC7 Software B MG 26 ? 6 'BINDING SITE FOR RESIDUE MG B 26' AC8 Software B MG 27 ? 8 'BINDING SITE FOR RESIDUE MG B 27' AC9 Software B MG 28 ? 6 'BINDING SITE FOR RESIDUE MG B 28' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HOH L . ? HOH A 20 . ? 1_555 ? 2 AC1 6 HOH L . ? HOH A 27 . ? 3_655 ? 3 AC1 6 HOH L . ? HOH A 29 . ? 3_655 ? 4 AC1 6 HOH L . ? HOH A 37 . ? 1_555 ? 5 AC1 6 HOH L . ? HOH A 41 . ? 3_655 ? 6 AC1 6 HOH M . ? HOH B 11 . ? 1_555 ? 7 AC2 6 HOH L . ? HOH A 119 . ? 1_555 ? 8 AC2 6 HOH L . ? HOH A 128 . ? 1_555 ? 9 AC2 6 HOH L . ? HOH A 155 . ? 1_555 ? 10 AC2 6 HOH L . ? HOH A 159 . ? 1_555 ? 11 AC2 6 HOH M . ? HOH B 74 . ? 1_555 ? 12 AC2 6 HOH M . ? HOH B 109 . ? 1_555 ? 13 AC3 6 HOH L . ? HOH A 113 . ? 4_465 ? 14 AC3 6 HOH L . ? HOH A 135 . ? 1_555 ? 15 AC3 6 HOH L . ? HOH A 150 . ? 4_465 ? 16 AC3 6 HOH L . ? HOH A 158 . ? 1_555 ? 17 AC3 6 HOH M . ? HOH B 70 . ? 1_555 ? 18 AC3 6 HOH M . ? HOH B 144 . ? 4_465 ? 19 AC4 6 DG A 4 ? DG A 4 . ? 1_555 ? 20 AC4 6 HOH L . ? HOH A 23 . ? 1_555 ? 21 AC4 6 HOH L . ? HOH A 189 . ? 1_555 ? 22 AC4 6 HOH L . ? HOH A 190 . ? 1_555 ? 23 AC4 6 MG J . ? MG B 27 . ? 1_655 ? 24 AC4 6 HOH M . ? HOH B 188 . ? 1_655 ? 25 AC5 6 DT B 7 ? DT B 19 . ? 1_555 ? 26 AC5 6 HOH M . ? HOH B 55 . ? 1_555 ? 27 AC5 6 HOH M . ? HOH B 62 . ? 1_555 ? 28 AC5 6 HOH M . ? HOH B 75 . ? 3_655 ? 29 AC5 6 HOH M . ? HOH B 82 . ? 3_655 ? 30 AC5 6 HOH M . ? HOH B 114 . ? 3_655 ? 31 AC6 6 DA B 5 ? DA B 17 . ? 1_555 ? 32 AC6 6 HOH M . ? HOH B 120 . ? 1_555 ? 33 AC6 6 HOH M . ? HOH B 131 . ? 1_555 ? 34 AC6 6 HOH M . ? HOH B 166 . ? 1_555 ? 35 AC6 6 HOH M . ? HOH B 167 . ? 1_555 ? 36 AC6 6 HOH M . ? HOH B 171 . ? 1_555 ? 37 AC7 6 DG B 4 ? DG B 16 . ? 1_555 ? 38 AC7 6 HOH M . ? HOH B 178 . ? 1_555 ? 39 AC7 6 HOH M . ? HOH B 179 . ? 1_555 ? 40 AC7 6 HOH M . ? HOH B 180 . ? 1_555 ? 41 AC7 6 HOH M . ? HOH B 181 . ? 1_555 ? 42 AC7 6 HOH M . ? HOH B 182 . ? 1_555 ? 43 AC8 8 MG F . ? MG A 16 . ? 1_455 ? 44 AC8 8 HOH L . ? HOH A 190 . ? 1_455 ? 45 AC8 8 DC B 9 ? DC B 21 . ? 1_555 ? 46 AC8 8 HOH M . ? HOH B 187 . ? 1_555 ? 47 AC8 8 HOH M . ? HOH B 188 . ? 1_555 ? 48 AC8 8 HOH M . ? HOH B 195 . ? 1_555 ? 49 AC8 8 HOH M . ? HOH B 196 . ? 1_555 ? 50 AC8 8 HOH M . ? HOH B 197 . ? 1_555 ? 51 AC9 6 HOH M . ? HOH B 76 . ? 2_665 ? 52 AC9 6 HOH M . ? HOH B 85 . ? 1_555 ? 53 AC9 6 HOH M . ? HOH B 118 . ? 1_555 ? 54 AC9 6 HOH M . ? HOH B 201 . ? 1_555 ? 55 AC9 6 HOH M . ? HOH B 202 . ? 1_555 ? 56 AC9 6 HOH M . ? HOH B 203 . ? 1_555 ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "C3'" _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 DG _pdbx_validate_rmsd_angle.auth_seq_id_1 22 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C2'" _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 DG _pdbx_validate_rmsd_angle.auth_seq_id_2 22 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 "C1'" _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 DG _pdbx_validate_rmsd_angle.auth_seq_id_3 22 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 97.26 _pdbx_validate_rmsd_angle.angle_target_value 102.40 _pdbx_validate_rmsd_angle.angle_deviation -5.14 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.80 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id DC _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 9 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.063 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 MG MG MG N N 147 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3U2N 'double helix' 3U2N 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 12 1_555 0.268 -0.174 0.100 4.884 -20.792 1.437 1 A_DC1:DG24_B A 1 ? B 24 ? 19 1 1 A DG 2 1_555 B DC 11 1_555 -0.136 -0.147 0.122 1.356 -4.502 -3.517 2 A_DG2:DC23_B A 2 ? B 23 ? 19 1 1 A DC 3 1_555 B DG 10 1_555 0.257 -0.140 0.195 -2.128 -7.891 0.920 3 A_DC3:DG22_B A 3 ? B 22 ? 19 1 1 A DG 4 1_555 B DC 9 1_555 -0.218 -0.083 0.092 14.612 -7.307 -0.376 4 A_DG4:DC21_B A 4 ? B 21 ? 19 1 1 A DA 5 1_555 B DT 8 1_555 0.081 -0.113 -0.007 9.004 -15.880 2.546 5 A_DA5:DT20_B A 5 ? B 20 ? 20 1 1 A DA 6 1_555 B DT 7 1_555 0.098 -0.131 0.169 3.822 -15.453 4.779 6 A_DA6:DT19_B A 6 ? B 19 ? 20 1 1 A DT 7 1_555 B DA 6 1_555 -0.060 -0.116 0.114 -0.028 -17.125 4.877 7 A_DT7:DA18_B A 7 ? B 18 ? 20 1 1 A DT 8 1_555 B DA 5 1_555 -0.060 -0.134 -0.088 -2.847 -13.920 2.976 8 A_DT8:DA17_B A 8 ? B 17 ? 20 1 1 A DC 9 1_555 B DG 4 1_555 0.290 -0.060 0.150 -15.096 -11.936 -0.599 9 A_DC9:DG16_B A 9 ? B 16 ? 19 1 1 A DG 10 1_555 B DC 3 1_555 -0.075 -0.140 0.259 3.167 -5.153 2.842 10 A_DG10:DC15_B A 10 ? B 15 ? 19 1 1 A DC 11 1_555 B DG 2 1_555 0.108 -0.140 0.174 5.983 -16.412 -1.589 11 A_DC11:DG14_B A 11 ? B 14 ? 19 1 1 A DG 12 1_555 B DC 1 1_555 -0.377 -0.201 -0.457 9.955 26.541 -3.770 12 A_DG12:DC13_B A 12 ? B 13 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 12 1_555 A DG 2 1_555 B DC 11 1_555 -0.483 0.164 3.400 -0.255 5.892 33.293 -0.714 0.787 3.382 10.184 0.441 33.796 1 AA_DC1DG2:DC23DG24_BB A 1 ? B 24 ? A 2 ? B 23 ? 1 A DG 2 1_555 B DC 11 1_555 A DC 3 1_555 B DG 10 1_555 0.857 0.698 3.424 0.176 -2.428 42.203 1.226 -1.170 3.384 -3.368 -0.244 42.269 2 AA_DG2DC3:DG22DC23_BB A 2 ? B 23 ? A 3 ? B 22 ? 1 A DC 3 1_555 B DG 10 1_555 A DG 4 1_555 B DC 9 1_555 -0.383 0.657 3.027 2.227 9.650 25.583 -0.901 1.336 3.026 20.825 -4.807 27.404 3 AA_DC3DG4:DC21DG22_BB A 3 ? B 22 ? A 4 ? B 21 ? 1 A DG 4 1_555 B DC 9 1_555 A DA 5 1_555 B DT 8 1_555 -0.073 -0.084 3.397 0.552 2.981 38.902 -0.499 0.178 3.381 4.467 -0.827 39.015 4 AA_DG4DA5:DT20DC21_BB A 4 ? B 21 ? A 5 ? B 20 ? 1 A DA 5 1_555 B DT 8 1_555 A DA 6 1_555 B DT 7 1_555 0.186 -0.442 3.293 -1.765 1.638 35.431 -0.964 -0.564 3.257 2.688 2.896 35.510 5 AA_DA5DA6:DT19DT20_BB A 5 ? B 20 ? A 6 ? B 19 ? 1 A DA 6 1_555 B DT 7 1_555 A DT 7 1_555 B DA 6 1_555 -0.163 -0.660 3.287 0.332 -0.845 31.401 -1.059 0.364 3.301 -1.560 -0.614 31.413 6 AA_DA6DT7:DA18DT19_BB A 6 ? B 19 ? A 7 ? B 18 ? 1 A DT 7 1_555 B DA 6 1_555 A DT 8 1_555 B DA 5 1_555 -0.096 -0.233 3.217 2.227 -1.170 36.667 -0.213 0.450 3.212 -1.857 -3.534 36.750 7 AA_DT7DT8:DA17DA18_BB A 7 ? B 18 ? A 8 ? B 17 ? 1 A DT 8 1_555 B DA 5 1_555 A DC 9 1_555 B DG 4 1_555 -0.206 -0.044 3.536 -0.469 -1.182 42.931 0.067 0.231 3.538 -1.614 0.641 42.949 8 AA_DT8DC9:DG16DA17_BB A 8 ? B 17 ? A 9 ? B 16 ? 1 A DC 9 1_555 B DG 4 1_555 A DG 10 1_555 B DC 3 1_555 0.632 0.865 3.003 -3.370 1.887 27.076 1.401 -2.103 2.956 4.005 7.151 27.345 9 AA_DC9DG10:DC15DG16_BB A 9 ? B 16 ? A 10 ? B 15 ? 1 A DG 10 1_555 B DC 3 1_555 A DC 11 1_555 B DG 2 1_555 -1.295 0.651 3.311 -2.621 -9.063 43.857 1.682 1.460 3.190 -11.969 3.461 44.811 10 AA_DG10DC11:DG14DC15_BB A 10 ? B 15 ? A 11 ? B 14 ? 1 A DC 11 1_555 B DG 2 1_555 A DG 12 1_555 B DC 1 1_555 1.392 0.328 3.664 3.750 -15.118 31.149 3.156 -1.684 3.303 -26.200 -6.498 34.740 11 AA_DC11DG12:DC13DG14_BB A 11 ? B 14 ? A 12 ? B 13 ? # _atom_sites.entry_id 3U2N _atom_sites.fract_transf_matrix[1][1] 0.041806 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025227 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015293 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P # loop_