data_3U2Y # _entry.id 3U2Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3U2Y pdb_00003u2y 10.2210/pdb3u2y/pdb RCSB RCSB068239 ? ? WWPDB D_1000068239 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-02-08 2 'Structure model' 1 1 2012-04-18 3 'Structure model' 1 2 2012-06-13 4 'Structure model' 1 3 2023-09-13 5 'Structure model' 1 4 2024-10-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_conn 6 5 'Structure model' pdbx_entry_details 7 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3U2Y _pdbx_database_status.recvd_initial_deposition_date 2011-10-04 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2XOK . unspecified PDB 2XQU . unspecified PDB 2X2V . unspecified PDB 2WGM . unspecified PDB 3U2F . unspecified PDB 3U32 . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Symersky, J.' 1 'Pagadala, V.' 2 'Osowski, D.' 3 'Krah, A.' 4 'Meier, T.' 5 'Faraldo-Gomez, J.' 6 'Mueller, D.M.' 7 # _citation.id primary _citation.title 'Structure of the c(10) ring of the yeast mitochondrial ATP synthase in the open conformation.' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 19 _citation.page_first 485 _citation.page_last 491 _citation.year 2012 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22504883 _citation.pdbx_database_id_DOI 10.1038/nsmb.2284 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Symersky, J.' 1 ? primary 'Pagadala, V.' 2 ? primary 'Osowski, D.' 3 ? primary 'Krah, A.' 4 ? primary 'Meier, T.' 5 ? primary 'Faraldo-Gomez, J.D.' 6 ? primary 'Mueller, D.M.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'ATP synthase subunit C, mitochondrial' 7790.385 5 ? ? ? ? 2 water nat water 18.015 42 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Lipid-binding protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(FME)QLVLAAKYIGAGISTIGLLGAGIGIAIVFAALINGVSRNPSIKDTVFPMAILGFALSEATGLFCLMVSFLLLFGV' _entity_poly.pdbx_seq_one_letter_code_can MQLVLAAKYIGAGISTIGLLGAGIGIAIVFAALINGVSRNPSIKDTVFPMAILGFALSEATGLFCLMVSFLLLFGV _entity_poly.pdbx_strand_id K,L,M,N,O _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 FME n 1 2 GLN n 1 3 LEU n 1 4 VAL n 1 5 LEU n 1 6 ALA n 1 7 ALA n 1 8 LYS n 1 9 TYR n 1 10 ILE n 1 11 GLY n 1 12 ALA n 1 13 GLY n 1 14 ILE n 1 15 SER n 1 16 THR n 1 17 ILE n 1 18 GLY n 1 19 LEU n 1 20 LEU n 1 21 GLY n 1 22 ALA n 1 23 GLY n 1 24 ILE n 1 25 GLY n 1 26 ILE n 1 27 ALA n 1 28 ILE n 1 29 VAL n 1 30 PHE n 1 31 ALA n 1 32 ALA n 1 33 LEU n 1 34 ILE n 1 35 ASN n 1 36 GLY n 1 37 VAL n 1 38 SER n 1 39 ARG n 1 40 ASN n 1 41 PRO n 1 42 SER n 1 43 ILE n 1 44 LYS n 1 45 ASP n 1 46 THR n 1 47 VAL n 1 48 PHE n 1 49 PRO n 1 50 MET n 1 51 ALA n 1 52 ILE n 1 53 LEU n 1 54 GLY n 1 55 PHE n 1 56 ALA n 1 57 LEU n 1 58 SER n 1 59 GLU n 1 60 ALA n 1 61 THR n 1 62 GLY n 1 63 LEU n 1 64 PHE n 1 65 CYS n 1 66 LEU n 1 67 MET n 1 68 VAL n 1 69 SER n 1 70 PHE n 1 71 LEU n 1 72 LEU n 1 73 LEU n 1 74 PHE n 1 75 GLY n 1 76 VAL n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ;Baker's yeast ; _entity_src_nat.pdbx_organism_scientific 'Saccharomyces cerevisiae' _entity_src_nat.pdbx_ncbi_taxonomy_id 4932 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FME 'L-peptide linking' n N-FORMYLMETHIONINE ? 'C6 H11 N O3 S' 177.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 FME 1 1 1 FME FME K . n A 1 2 GLN 2 2 2 GLN GLN K . n A 1 3 LEU 3 3 3 LEU LEU K . n A 1 4 VAL 4 4 4 VAL VAL K . n A 1 5 LEU 5 5 5 LEU LEU K . n A 1 6 ALA 6 6 6 ALA ALA K . n A 1 7 ALA 7 7 7 ALA ALA K . n A 1 8 LYS 8 8 8 LYS LYS K . n A 1 9 TYR 9 9 9 TYR TYR K . n A 1 10 ILE 10 10 10 ILE ILE K . n A 1 11 GLY 11 11 11 GLY GLY K . n A 1 12 ALA 12 12 12 ALA ALA K . n A 1 13 GLY 13 13 13 GLY GLY K . n A 1 14 ILE 14 14 14 ILE ILE K . n A 1 15 SER 15 15 15 SER SER K . n A 1 16 THR 16 16 16 THR THR K . n A 1 17 ILE 17 17 17 ILE ILE K . n A 1 18 GLY 18 18 18 GLY GLY K . n A 1 19 LEU 19 19 19 LEU LEU K . n A 1 20 LEU 20 20 20 LEU LEU K . n A 1 21 GLY 21 21 21 GLY GLY K . n A 1 22 ALA 22 22 22 ALA ALA K . n A 1 23 GLY 23 23 23 GLY GLY K . n A 1 24 ILE 24 24 24 ILE ILE K . n A 1 25 GLY 25 25 25 GLY GLY K . n A 1 26 ILE 26 26 26 ILE ILE K . n A 1 27 ALA 27 27 27 ALA ALA K . n A 1 28 ILE 28 28 28 ILE ILE K . n A 1 29 VAL 29 29 29 VAL VAL K . n A 1 30 PHE 30 30 30 PHE PHE K . n A 1 31 ALA 31 31 31 ALA ALA K . n A 1 32 ALA 32 32 32 ALA ALA K . n A 1 33 LEU 33 33 33 LEU LEU K . n A 1 34 ILE 34 34 34 ILE ILE K . n A 1 35 ASN 35 35 35 ASN ASN K . n A 1 36 GLY 36 36 36 GLY GLY K . n A 1 37 VAL 37 37 37 VAL VAL K . n A 1 38 SER 38 38 38 SER SER K . n A 1 39 ARG 39 39 39 ARG ARG K . n A 1 40 ASN 40 40 40 ASN ASN K . n A 1 41 PRO 41 41 41 PRO PRO K . n A 1 42 SER 42 42 42 SER SER K . n A 1 43 ILE 43 43 43 ILE ILE K . n A 1 44 LYS 44 44 44 LYS LYS K . n A 1 45 ASP 45 45 45 ASP ASP K . n A 1 46 THR 46 46 46 THR THR K . n A 1 47 VAL 47 47 47 VAL VAL K . n A 1 48 PHE 48 48 48 PHE PHE K . n A 1 49 PRO 49 49 49 PRO PRO K . n A 1 50 MET 50 50 50 MET MET K . n A 1 51 ALA 51 51 51 ALA ALA K . n A 1 52 ILE 52 52 52 ILE ILE K . n A 1 53 LEU 53 53 53 LEU LEU K . n A 1 54 GLY 54 54 54 GLY GLY K . n A 1 55 PHE 55 55 55 PHE PHE K . n A 1 56 ALA 56 56 56 ALA ALA K . n A 1 57 LEU 57 57 57 LEU LEU K . n A 1 58 SER 58 58 58 SER SER K . n A 1 59 GLU 59 59 59 GLU GLU K . n A 1 60 ALA 60 60 60 ALA ALA K . n A 1 61 THR 61 61 61 THR THR K . n A 1 62 GLY 62 62 62 GLY GLY K . n A 1 63 LEU 63 63 63 LEU LEU K . n A 1 64 PHE 64 64 64 PHE PHE K . n A 1 65 CYS 65 65 65 CYS CYS K . n A 1 66 LEU 66 66 66 LEU LEU K . n A 1 67 MET 67 67 67 MET MET K . n A 1 68 VAL 68 68 68 VAL VAL K . n A 1 69 SER 69 69 69 SER SER K . n A 1 70 PHE 70 70 70 PHE PHE K . n A 1 71 LEU 71 71 71 LEU LEU K . n A 1 72 LEU 72 72 72 LEU LEU K . n A 1 73 LEU 73 73 73 LEU LEU K . n A 1 74 PHE 74 74 74 PHE PHE K . n A 1 75 GLY 75 75 ? ? ? K . n A 1 76 VAL 76 76 ? ? ? K . n B 1 1 FME 1 1 1 FME FME L . n B 1 2 GLN 2 2 2 GLN GLN L . n B 1 3 LEU 3 3 3 LEU LEU L . n B 1 4 VAL 4 4 4 VAL VAL L . n B 1 5 LEU 5 5 5 LEU LEU L . n B 1 6 ALA 6 6 6 ALA ALA L . n B 1 7 ALA 7 7 7 ALA ALA L . n B 1 8 LYS 8 8 8 LYS LYS L . n B 1 9 TYR 9 9 9 TYR TYR L . n B 1 10 ILE 10 10 10 ILE ILE L . n B 1 11 GLY 11 11 11 GLY GLY L . n B 1 12 ALA 12 12 12 ALA ALA L . n B 1 13 GLY 13 13 13 GLY GLY L . n B 1 14 ILE 14 14 14 ILE ILE L . n B 1 15 SER 15 15 15 SER SER L . n B 1 16 THR 16 16 16 THR THR L . n B 1 17 ILE 17 17 17 ILE ILE L . n B 1 18 GLY 18 18 18 GLY GLY L . n B 1 19 LEU 19 19 19 LEU LEU L . n B 1 20 LEU 20 20 20 LEU LEU L . n B 1 21 GLY 21 21 21 GLY GLY L . n B 1 22 ALA 22 22 22 ALA ALA L . n B 1 23 GLY 23 23 23 GLY GLY L . n B 1 24 ILE 24 24 24 ILE ILE L . n B 1 25 GLY 25 25 25 GLY GLY L . n B 1 26 ILE 26 26 26 ILE ILE L . n B 1 27 ALA 27 27 27 ALA ALA L . n B 1 28 ILE 28 28 28 ILE ILE L . n B 1 29 VAL 29 29 29 VAL VAL L . n B 1 30 PHE 30 30 30 PHE PHE L . n B 1 31 ALA 31 31 31 ALA ALA L . n B 1 32 ALA 32 32 32 ALA ALA L . n B 1 33 LEU 33 33 33 LEU LEU L . n B 1 34 ILE 34 34 34 ILE ILE L . n B 1 35 ASN 35 35 35 ASN ASN L . n B 1 36 GLY 36 36 36 GLY GLY L . n B 1 37 VAL 37 37 37 VAL VAL L . n B 1 38 SER 38 38 38 SER SER L . n B 1 39 ARG 39 39 39 ARG ARG L . n B 1 40 ASN 40 40 40 ASN ASN L . n B 1 41 PRO 41 41 41 PRO PRO L . n B 1 42 SER 42 42 42 SER SER L . n B 1 43 ILE 43 43 43 ILE ILE L . n B 1 44 LYS 44 44 44 LYS LYS L . n B 1 45 ASP 45 45 45 ASP ASP L . n B 1 46 THR 46 46 46 THR THR L . n B 1 47 VAL 47 47 47 VAL VAL L . n B 1 48 PHE 48 48 48 PHE PHE L . n B 1 49 PRO 49 49 49 PRO PRO L . n B 1 50 MET 50 50 50 MET MET L . n B 1 51 ALA 51 51 51 ALA ALA L . n B 1 52 ILE 52 52 52 ILE ILE L . n B 1 53 LEU 53 53 53 LEU LEU L . n B 1 54 GLY 54 54 54 GLY GLY L . n B 1 55 PHE 55 55 55 PHE PHE L . n B 1 56 ALA 56 56 56 ALA ALA L . n B 1 57 LEU 57 57 57 LEU LEU L . n B 1 58 SER 58 58 58 SER SER L . n B 1 59 GLU 59 59 59 GLU GLU L . n B 1 60 ALA 60 60 60 ALA ALA L . n B 1 61 THR 61 61 61 THR THR L . n B 1 62 GLY 62 62 62 GLY GLY L . n B 1 63 LEU 63 63 63 LEU LEU L . n B 1 64 PHE 64 64 64 PHE PHE L . n B 1 65 CYS 65 65 65 CYS CYS L . n B 1 66 LEU 66 66 66 LEU LEU L . n B 1 67 MET 67 67 67 MET MET L . n B 1 68 VAL 68 68 68 VAL VAL L . n B 1 69 SER 69 69 69 SER SER L . n B 1 70 PHE 70 70 70 PHE PHE L . n B 1 71 LEU 71 71 71 LEU LEU L . n B 1 72 LEU 72 72 72 LEU LEU L . n B 1 73 LEU 73 73 73 LEU LEU L . n B 1 74 PHE 74 74 74 PHE PHE L . n B 1 75 GLY 75 75 75 GLY GLY L . n B 1 76 VAL 76 76 ? ? ? L . n C 1 1 FME 1 1 1 FME FME M . n C 1 2 GLN 2 2 2 GLN GLN M . n C 1 3 LEU 3 3 3 LEU LEU M . n C 1 4 VAL 4 4 4 VAL VAL M . n C 1 5 LEU 5 5 5 LEU LEU M . n C 1 6 ALA 6 6 6 ALA ALA M . n C 1 7 ALA 7 7 7 ALA ALA M . n C 1 8 LYS 8 8 8 LYS LYS M . n C 1 9 TYR 9 9 9 TYR TYR M . n C 1 10 ILE 10 10 10 ILE ILE M . n C 1 11 GLY 11 11 11 GLY GLY M . n C 1 12 ALA 12 12 12 ALA ALA M . n C 1 13 GLY 13 13 13 GLY GLY M . n C 1 14 ILE 14 14 14 ILE ILE M . n C 1 15 SER 15 15 15 SER SER M . n C 1 16 THR 16 16 16 THR THR M . n C 1 17 ILE 17 17 17 ILE ILE M . n C 1 18 GLY 18 18 18 GLY GLY M . n C 1 19 LEU 19 19 19 LEU LEU M . n C 1 20 LEU 20 20 20 LEU LEU M . n C 1 21 GLY 21 21 21 GLY GLY M . n C 1 22 ALA 22 22 22 ALA ALA M . n C 1 23 GLY 23 23 23 GLY GLY M . n C 1 24 ILE 24 24 24 ILE ILE M . n C 1 25 GLY 25 25 25 GLY GLY M . n C 1 26 ILE 26 26 26 ILE ILE M . n C 1 27 ALA 27 27 27 ALA ALA M . n C 1 28 ILE 28 28 28 ILE ILE M . n C 1 29 VAL 29 29 29 VAL VAL M . n C 1 30 PHE 30 30 30 PHE PHE M . n C 1 31 ALA 31 31 31 ALA ALA M . n C 1 32 ALA 32 32 32 ALA ALA M . n C 1 33 LEU 33 33 33 LEU LEU M . n C 1 34 ILE 34 34 34 ILE ILE M . n C 1 35 ASN 35 35 35 ASN ASN M . n C 1 36 GLY 36 36 36 GLY GLY M . n C 1 37 VAL 37 37 37 VAL VAL M . n C 1 38 SER 38 38 38 SER SER M . n C 1 39 ARG 39 39 39 ARG ARG M . n C 1 40 ASN 40 40 40 ASN ASN M . n C 1 41 PRO 41 41 41 PRO PRO M . n C 1 42 SER 42 42 42 SER SER M . n C 1 43 ILE 43 43 43 ILE ILE M . n C 1 44 LYS 44 44 44 LYS LYS M . n C 1 45 ASP 45 45 45 ASP ASP M . n C 1 46 THR 46 46 46 THR THR M . n C 1 47 VAL 47 47 47 VAL VAL M . n C 1 48 PHE 48 48 48 PHE PHE M . n C 1 49 PRO 49 49 49 PRO PRO M . n C 1 50 MET 50 50 50 MET MET M . n C 1 51 ALA 51 51 51 ALA ALA M . n C 1 52 ILE 52 52 52 ILE ILE M . n C 1 53 LEU 53 53 53 LEU LEU M . n C 1 54 GLY 54 54 54 GLY GLY M . n C 1 55 PHE 55 55 55 PHE PHE M . n C 1 56 ALA 56 56 56 ALA ALA M . n C 1 57 LEU 57 57 57 LEU LEU M . n C 1 58 SER 58 58 58 SER SER M . n C 1 59 GLU 59 59 59 GLU GLU M . n C 1 60 ALA 60 60 60 ALA ALA M . n C 1 61 THR 61 61 61 THR THR M . n C 1 62 GLY 62 62 62 GLY GLY M . n C 1 63 LEU 63 63 63 LEU LEU M . n C 1 64 PHE 64 64 64 PHE PHE M . n C 1 65 CYS 65 65 65 CYS CYS M . n C 1 66 LEU 66 66 66 LEU LEU M . n C 1 67 MET 67 67 67 MET MET M . n C 1 68 VAL 68 68 68 VAL VAL M . n C 1 69 SER 69 69 69 SER SER M . n C 1 70 PHE 70 70 70 PHE PHE M . n C 1 71 LEU 71 71 71 LEU LEU M . n C 1 72 LEU 72 72 72 LEU LEU M . n C 1 73 LEU 73 73 73 LEU LEU M . n C 1 74 PHE 74 74 74 PHE PHE M . n C 1 75 GLY 75 75 75 GLY GLY M . n C 1 76 VAL 76 76 ? ? ? M . n D 1 1 FME 1 1 1 FME FME N . n D 1 2 GLN 2 2 2 GLN GLN N . n D 1 3 LEU 3 3 3 LEU LEU N . n D 1 4 VAL 4 4 4 VAL VAL N . n D 1 5 LEU 5 5 5 LEU LEU N . n D 1 6 ALA 6 6 6 ALA ALA N . n D 1 7 ALA 7 7 7 ALA ALA N . n D 1 8 LYS 8 8 8 LYS LYS N . n D 1 9 TYR 9 9 9 TYR TYR N . n D 1 10 ILE 10 10 10 ILE ILE N . n D 1 11 GLY 11 11 11 GLY GLY N . n D 1 12 ALA 12 12 12 ALA ALA N . n D 1 13 GLY 13 13 13 GLY GLY N . n D 1 14 ILE 14 14 14 ILE ILE N . n D 1 15 SER 15 15 15 SER SER N . n D 1 16 THR 16 16 16 THR THR N . n D 1 17 ILE 17 17 17 ILE ILE N . n D 1 18 GLY 18 18 18 GLY GLY N . n D 1 19 LEU 19 19 19 LEU LEU N . n D 1 20 LEU 20 20 20 LEU LEU N . n D 1 21 GLY 21 21 21 GLY GLY N . n D 1 22 ALA 22 22 22 ALA ALA N . n D 1 23 GLY 23 23 23 GLY GLY N . n D 1 24 ILE 24 24 24 ILE ILE N . n D 1 25 GLY 25 25 25 GLY GLY N . n D 1 26 ILE 26 26 26 ILE ILE N . n D 1 27 ALA 27 27 27 ALA ALA N . n D 1 28 ILE 28 28 28 ILE ILE N . n D 1 29 VAL 29 29 29 VAL VAL N . n D 1 30 PHE 30 30 30 PHE PHE N . n D 1 31 ALA 31 31 31 ALA ALA N . n D 1 32 ALA 32 32 32 ALA ALA N . n D 1 33 LEU 33 33 33 LEU LEU N . n D 1 34 ILE 34 34 34 ILE ILE N . n D 1 35 ASN 35 35 35 ASN ASN N . n D 1 36 GLY 36 36 36 GLY GLY N . n D 1 37 VAL 37 37 37 VAL VAL N . n D 1 38 SER 38 38 38 SER SER N . n D 1 39 ARG 39 39 39 ARG ARG N . n D 1 40 ASN 40 40 40 ASN ASN N . n D 1 41 PRO 41 41 41 PRO PRO N . n D 1 42 SER 42 42 42 SER SER N . n D 1 43 ILE 43 43 43 ILE ILE N . n D 1 44 LYS 44 44 44 LYS LYS N . n D 1 45 ASP 45 45 45 ASP ASP N . n D 1 46 THR 46 46 46 THR THR N . n D 1 47 VAL 47 47 47 VAL VAL N . n D 1 48 PHE 48 48 48 PHE PHE N . n D 1 49 PRO 49 49 49 PRO PRO N . n D 1 50 MET 50 50 50 MET MET N . n D 1 51 ALA 51 51 51 ALA ALA N . n D 1 52 ILE 52 52 52 ILE ILE N . n D 1 53 LEU 53 53 53 LEU LEU N . n D 1 54 GLY 54 54 54 GLY GLY N . n D 1 55 PHE 55 55 55 PHE PHE N . n D 1 56 ALA 56 56 56 ALA ALA N . n D 1 57 LEU 57 57 57 LEU LEU N . n D 1 58 SER 58 58 58 SER SER N . n D 1 59 GLU 59 59 59 GLU GLU N . n D 1 60 ALA 60 60 60 ALA ALA N . n D 1 61 THR 61 61 61 THR THR N . n D 1 62 GLY 62 62 62 GLY GLY N . n D 1 63 LEU 63 63 63 LEU LEU N . n D 1 64 PHE 64 64 64 PHE PHE N . n D 1 65 CYS 65 65 65 CYS CYS N . n D 1 66 LEU 66 66 66 LEU LEU N . n D 1 67 MET 67 67 67 MET MET N . n D 1 68 VAL 68 68 68 VAL VAL N . n D 1 69 SER 69 69 69 SER SER N . n D 1 70 PHE 70 70 70 PHE PHE N . n D 1 71 LEU 71 71 71 LEU LEU N . n D 1 72 LEU 72 72 72 LEU LEU N . n D 1 73 LEU 73 73 73 LEU LEU N . n D 1 74 PHE 74 74 74 PHE PHE N . n D 1 75 GLY 75 75 75 GLY GLY N . n D 1 76 VAL 76 76 ? ? ? N . n E 1 1 FME 1 1 1 FME FME O . n E 1 2 GLN 2 2 2 GLN GLN O . n E 1 3 LEU 3 3 3 LEU LEU O . n E 1 4 VAL 4 4 4 VAL VAL O . n E 1 5 LEU 5 5 5 LEU LEU O . n E 1 6 ALA 6 6 6 ALA ALA O . n E 1 7 ALA 7 7 7 ALA ALA O . n E 1 8 LYS 8 8 8 LYS LYS O . n E 1 9 TYR 9 9 9 TYR TYR O . n E 1 10 ILE 10 10 10 ILE ILE O . n E 1 11 GLY 11 11 11 GLY GLY O . n E 1 12 ALA 12 12 12 ALA ALA O . n E 1 13 GLY 13 13 13 GLY GLY O . n E 1 14 ILE 14 14 14 ILE ILE O . n E 1 15 SER 15 15 15 SER SER O . n E 1 16 THR 16 16 16 THR THR O . n E 1 17 ILE 17 17 17 ILE ILE O . n E 1 18 GLY 18 18 18 GLY GLY O . n E 1 19 LEU 19 19 19 LEU LEU O . n E 1 20 LEU 20 20 20 LEU LEU O . n E 1 21 GLY 21 21 21 GLY GLY O . n E 1 22 ALA 22 22 22 ALA ALA O . n E 1 23 GLY 23 23 23 GLY GLY O . n E 1 24 ILE 24 24 24 ILE ILE O . n E 1 25 GLY 25 25 25 GLY GLY O . n E 1 26 ILE 26 26 26 ILE ILE O . n E 1 27 ALA 27 27 27 ALA ALA O . n E 1 28 ILE 28 28 28 ILE ILE O . n E 1 29 VAL 29 29 29 VAL VAL O . n E 1 30 PHE 30 30 30 PHE PHE O . n E 1 31 ALA 31 31 31 ALA ALA O . n E 1 32 ALA 32 32 32 ALA ALA O . n E 1 33 LEU 33 33 33 LEU LEU O . n E 1 34 ILE 34 34 34 ILE ILE O . n E 1 35 ASN 35 35 35 ASN ASN O . n E 1 36 GLY 36 36 36 GLY GLY O . n E 1 37 VAL 37 37 37 VAL VAL O . n E 1 38 SER 38 38 38 SER SER O . n E 1 39 ARG 39 39 39 ARG ARG O . n E 1 40 ASN 40 40 40 ASN ASN O . n E 1 41 PRO 41 41 41 PRO PRO O . n E 1 42 SER 42 42 42 SER SER O . n E 1 43 ILE 43 43 43 ILE ILE O . n E 1 44 LYS 44 44 44 LYS LYS O . n E 1 45 ASP 45 45 45 ASP ASP O . n E 1 46 THR 46 46 46 THR THR O . n E 1 47 VAL 47 47 47 VAL VAL O . n E 1 48 PHE 48 48 48 PHE PHE O . n E 1 49 PRO 49 49 49 PRO PRO O . n E 1 50 MET 50 50 50 MET MET O . n E 1 51 ALA 51 51 51 ALA ALA O . n E 1 52 ILE 52 52 52 ILE ILE O . n E 1 53 LEU 53 53 53 LEU LEU O . n E 1 54 GLY 54 54 54 GLY GLY O . n E 1 55 PHE 55 55 55 PHE PHE O . n E 1 56 ALA 56 56 56 ALA ALA O . n E 1 57 LEU 57 57 57 LEU LEU O . n E 1 58 SER 58 58 58 SER SER O . n E 1 59 GLU 59 59 59 GLU GLU O . n E 1 60 ALA 60 60 60 ALA ALA O . n E 1 61 THR 61 61 61 THR THR O . n E 1 62 GLY 62 62 62 GLY GLY O . n E 1 63 LEU 63 63 63 LEU LEU O . n E 1 64 PHE 64 64 64 PHE PHE O . n E 1 65 CYS 65 65 65 CYS CYS O . n E 1 66 LEU 66 66 66 LEU LEU O . n E 1 67 MET 67 67 67 MET MET O . n E 1 68 VAL 68 68 68 VAL VAL O . n E 1 69 SER 69 69 69 SER SER O . n E 1 70 PHE 70 70 70 PHE PHE O . n E 1 71 LEU 71 71 71 LEU LEU O . n E 1 72 LEU 72 72 72 LEU LEU O . n E 1 73 LEU 73 73 73 LEU LEU O . n E 1 74 PHE 74 74 74 PHE PHE O . n E 1 75 GLY 75 75 ? ? ? O . n E 1 76 VAL 76 76 ? ? ? O . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 HOH 1 77 5 HOH HOH K . F 2 HOH 2 78 10 HOH HOH K . F 2 HOH 3 79 11 HOH HOH K . F 2 HOH 4 80 12 HOH HOH K . F 2 HOH 5 81 18 HOH HOH K . F 2 HOH 6 82 21 HOH HOH K . F 2 HOH 7 83 26 HOH HOH K . F 2 HOH 8 84 34 HOH HOH K . F 2 HOH 9 85 41 HOH HOH K . G 2 HOH 1 77 7 HOH HOH L . G 2 HOH 2 78 8 HOH HOH L . G 2 HOH 3 79 24 HOH HOH L . G 2 HOH 4 80 28 HOH HOH L . G 2 HOH 5 81 32 HOH HOH L . G 2 HOH 6 82 35 HOH HOH L . G 2 HOH 7 83 43 HOH HOH L . H 2 HOH 1 77 2 HOH HOH M . H 2 HOH 2 78 4 HOH HOH M . H 2 HOH 3 79 9 HOH HOH M . H 2 HOH 4 80 13 HOH HOH M . H 2 HOH 5 81 17 HOH HOH M . H 2 HOH 6 82 19 HOH HOH M . H 2 HOH 7 83 29 HOH HOH M . H 2 HOH 8 84 36 HOH HOH M . H 2 HOH 9 85 40 HOH HOH M . I 2 HOH 1 77 1 HOH HOH N . I 2 HOH 2 78 15 HOH HOH N . I 2 HOH 3 79 16 HOH HOH N . I 2 HOH 4 80 22 HOH HOH N . I 2 HOH 5 81 25 HOH HOH N . I 2 HOH 6 82 31 HOH HOH N . I 2 HOH 7 83 33 HOH HOH N . I 2 HOH 8 84 42 HOH HOH N . J 2 HOH 1 77 3 HOH HOH O . J 2 HOH 2 78 6 HOH HOH O . J 2 HOH 3 79 14 HOH HOH O . J 2 HOH 4 80 20 HOH HOH O . J 2 HOH 5 81 23 HOH HOH O . J 2 HOH 6 82 27 HOH HOH O . J 2 HOH 7 83 30 HOH HOH O . J 2 HOH 8 84 37 HOH HOH O . J 2 HOH 9 85 39 HOH HOH O . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 K LYS 8 ? NZ ? A LYS 8 NZ 2 1 Y 1 K PHE 74 ? CG ? A PHE 74 CG 3 1 Y 1 K PHE 74 ? CD1 ? A PHE 74 CD1 4 1 Y 1 K PHE 74 ? CD2 ? A PHE 74 CD2 5 1 Y 1 K PHE 74 ? CE1 ? A PHE 74 CE1 6 1 Y 1 K PHE 74 ? CE2 ? A PHE 74 CE2 7 1 Y 1 K PHE 74 ? CZ ? A PHE 74 CZ 8 1 Y 1 L FME 1 ? CG ? B FME 1 CG 9 1 Y 1 L FME 1 ? SD ? B FME 1 SD 10 1 Y 1 L FME 1 ? CE ? B FME 1 CE 11 1 Y 1 L GLN 2 ? CG ? B GLN 2 CG 12 1 Y 1 L GLN 2 ? CD ? B GLN 2 CD 13 1 Y 1 L GLN 2 ? OE1 ? B GLN 2 OE1 14 1 Y 1 L GLN 2 ? NE2 ? B GLN 2 NE2 15 1 Y 1 M FME 1 ? SD ? C FME 1 SD 16 1 Y 1 M FME 1 ? CE ? C FME 1 CE 17 1 Y 1 M GLN 2 ? CG ? C GLN 2 CG 18 1 Y 1 M GLN 2 ? CD ? C GLN 2 CD 19 1 Y 1 M GLN 2 ? OE1 ? C GLN 2 OE1 20 1 Y 1 M GLN 2 ? NE2 ? C GLN 2 NE2 21 1 Y 1 N FME 1 ? CG ? D FME 1 CG 22 1 Y 1 N FME 1 ? SD ? D FME 1 SD 23 1 Y 1 N FME 1 ? CE ? D FME 1 CE 24 1 Y 1 N GLN 2 ? OE1 ? D GLN 2 OE1 25 1 Y 1 N GLN 2 ? NE2 ? D GLN 2 NE2 26 1 Y 1 N LYS 8 ? NZ ? D LYS 8 NZ 27 1 Y 1 O FME 1 ? SD ? E FME 1 SD 28 1 Y 1 O FME 1 ? CE ? E FME 1 CE 29 1 Y 1 O GLN 2 ? CG ? E GLN 2 CG 30 1 Y 1 O GLN 2 ? CD ? E GLN 2 CD 31 1 Y 1 O GLN 2 ? OE1 ? E GLN 2 OE1 32 1 Y 1 O GLN 2 ? NE2 ? E GLN 2 NE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Blu-Ice 'data collection' . ? 1 REFMAC refinement 5.5.0109 ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 REFMAC phasing 5.5.0109 ? 5 # _cell.entry_id 3U2Y _cell.length_a 54.143 _cell.length_b 54.143 _cell.length_c 244.834 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 40 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3U2Y _symmetry.space_group_name_H-M 'P 42 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 93 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3U2Y _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.30 _exptl_crystal.density_percent_sol 46.60 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.1 _exptl_crystal_grow.pdbx_details ;68% MPD, 8% propolyene glycol, 0.3M NaCl, 0.1M malonate pH 7.0, 2mM MgSO4, 50 mM MES pH 6.1, VAPOR DIFFUSION, SITTING DROP, temperature 294K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2011-06-25 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.033 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 23-ID-D' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 23-ID-D _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.033 # _reflns.entry_id 3U2Y _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 2.5 _reflns.number_obs 13579 _reflns.number_all 13579 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.164 _reflns.pdbx_Rsym_value 0.164 _reflns.pdbx_netI_over_sigmaI 4.6 _reflns.B_iso_Wilson_estimate 24.3 _reflns.pdbx_redundancy 6.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.5 _reflns_shell.d_res_low 2.59 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.687 _reflns_shell.pdbx_Rsym_value 0.687 _reflns_shell.meanI_over_sigI_obs 3.5 _reflns_shell.pdbx_redundancy 6.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1329 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3U2Y _refine.ls_number_reflns_obs 12750 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.0 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 99.01 _refine.ls_R_factor_obs 0.19371 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19200 _refine.ls_R_factor_R_free 0.22727 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 666 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.952 _refine.correlation_coeff_Fo_to_Fc_free 0.934 _refine.B_iso_mean 26.356 _refine.aniso_B[1][1] 0.91 _refine.aniso_B[2][2] 0.91 _refine.aniso_B[3][3] -1.83 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB entry 3U2F' _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model isotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.268 _refine.overall_SU_ML 0.169 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 7.444 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R 0.589 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2655 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 42 _refine_hist.number_atoms_total 2697 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 50.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.016 0.022 ? 2718 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.454 2.005 ? 3686 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 4.751 5.000 ? 376 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 37.071 23.125 ? 64 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 15.757 15.000 ? 430 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 20.654 15.000 ? 5 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.108 0.200 ? 474 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.007 0.021 ? 1896 ? 'X-RAY DIFFRACTION' r_mcbond_it 0.562 1.500 ? 1839 ? 'X-RAY DIFFRACTION' r_mcangle_it 1.174 2.000 ? 2918 ? 'X-RAY DIFFRACTION' r_scbond_it 2.389 3.000 ? 879 ? 'X-RAY DIFFRACTION' r_scangle_it 3.892 4.500 ? 764 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.500 _refine_ls_shell.d_res_low 2.565 _refine_ls_shell.number_reflns_R_work 939 _refine_ls_shell.R_factor_R_work 0.211 _refine_ls_shell.percent_reflns_obs 99.09 _refine_ls_shell.R_factor_R_free 0.233 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 41 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 980 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3U2Y _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3U2Y _struct.title 'ATP synthase c10 ring in proton-unlocked conformation at pH 6.1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3U2Y _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' _struct_keywords.text 'F1FO ATP synthase, proton pore, c10 ring, membrane protein' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ATP9_YEAST _struct_ref.pdbx_db_accession P61829 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MQLVLAAKYIGAGISTIGLLGAGIGIAIVFAALINGVSRNPSIKDTVFPMAILGFALSEATGLFCLMVSFLLLFGV _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3U2Y K 1 ? 76 ? P61829 1 ? 76 ? 1 76 2 1 3U2Y L 1 ? 76 ? P61829 1 ? 76 ? 1 76 3 1 3U2Y M 1 ? 76 ? P61829 1 ? 76 ? 1 76 4 1 3U2Y N 1 ? 76 ? P61829 1 ? 76 ? 1 76 5 1 3U2Y O 1 ? 76 ? P61829 1 ? 76 ? 1 76 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details decameric _pdbx_struct_assembly.oligomeric_count 10 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 31160 ? 1 MORE -414 ? 1 'SSA (A^2)' 22620 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1.0000000000 0.0000000000 0.0000000000 54.1430000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 FME A 1 ? SER A 15 ? FME K 1 SER K 15 1 ? 15 HELX_P HELX_P2 2 GLY A 18 ? ASN A 40 ? GLY K 18 ASN K 40 1 ? 23 HELX_P HELX_P3 3 ILE A 43 ? PHE A 74 ? ILE K 43 PHE K 74 1 ? 32 HELX_P HELX_P4 4 GLN B 2 ? SER B 15 ? GLN L 2 SER L 15 1 ? 14 HELX_P HELX_P5 5 GLY B 18 ? ASN B 40 ? GLY L 18 ASN L 40 1 ? 23 HELX_P HELX_P6 6 ILE B 43 ? GLY B 75 ? ILE L 43 GLY L 75 1 ? 33 HELX_P HELX_P7 7 GLN C 2 ? SER C 15 ? GLN M 2 SER M 15 1 ? 14 HELX_P HELX_P8 8 GLY C 18 ? ASN C 40 ? GLY M 18 ASN M 40 1 ? 23 HELX_P HELX_P9 9 ILE C 43 ? GLY C 75 ? ILE M 43 GLY M 75 1 ? 33 HELX_P HELX_P10 10 GLN D 2 ? SER D 15 ? GLN N 2 SER N 15 1 ? 14 HELX_P HELX_P11 11 GLY D 18 ? ASN D 40 ? GLY N 18 ASN N 40 1 ? 23 HELX_P HELX_P12 12 ILE D 43 ? GLY D 75 ? ILE N 43 GLY N 75 1 ? 33 HELX_P HELX_P13 13 GLN E 2 ? SER E 15 ? GLN O 2 SER O 15 1 ? 14 HELX_P HELX_P14 14 GLY E 18 ? ASN E 40 ? GLY O 18 ASN O 40 1 ? 23 HELX_P HELX_P15 15 ILE E 43 ? PHE E 74 ? ILE O 43 PHE O 74 1 ? 32 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A FME 1 C ? ? ? 1_555 A GLN 2 N ? ? K FME 1 K GLN 2 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? B FME 1 C ? ? ? 1_555 B GLN 2 N ? ? L FME 1 L GLN 2 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale3 covale both ? C FME 1 C ? ? ? 1_555 C GLN 2 N ? ? M FME 1 M GLN 2 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale4 covale both ? D FME 1 C ? ? ? 1_555 D GLN 2 N ? ? N FME 1 N GLN 2 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale5 covale both ? E FME 1 C ? ? ? 1_555 E GLN 2 N ? ? O FME 1 O GLN 2 1_555 ? ? ? ? ? ? ? 1.330 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 FME A 1 ? . . . . FME K 1 ? 1_555 . . . . . . . MET 1 FME Formylation 'Named protein modification' 2 FME B 1 ? . . . . FME L 1 ? 1_555 . . . . . . . MET 1 FME Formylation 'Named protein modification' 3 FME C 1 ? . . . . FME M 1 ? 1_555 . . . . . . . MET 1 FME Formylation 'Named protein modification' 4 FME D 1 ? . . . . FME N 1 ? 1_555 . . . . . . . MET 1 FME Formylation 'Named protein modification' 5 FME E 1 ? . . . . FME O 1 ? 1_555 . . . . . . . MET 1 FME Formylation 'Named protein modification' # _pdbx_entry_details.entry_id 3U2Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN L 40 ? ? -151.80 75.15 2 1 ASN M 40 ? ? -155.19 78.42 # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A FME 1 K FME 1 ? MET N-FORMYLMETHIONINE 2 B FME 1 L FME 1 ? MET N-FORMYLMETHIONINE 3 C FME 1 M FME 1 ? MET N-FORMYLMETHIONINE 4 D FME 1 N FME 1 ? MET N-FORMYLMETHIONINE 5 E FME 1 O FME 1 ? MET N-FORMYLMETHIONINE # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 L HOH 77 ? G HOH . 2 1 L HOH 81 ? G HOH . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 K GLY 75 ? A GLY 75 2 1 Y 1 K VAL 76 ? A VAL 76 3 1 Y 1 L VAL 76 ? B VAL 76 4 1 Y 1 M VAL 76 ? C VAL 76 5 1 Y 1 N VAL 76 ? D VAL 76 6 1 Y 1 O GLY 75 ? E GLY 75 7 1 Y 1 O VAL 76 ? E VAL 76 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 FME N N N N 88 FME CN C N N 89 FME O1 O N N 90 FME CA C N S 91 FME CB C N N 92 FME CG C N N 93 FME SD S N N 94 FME CE C N N 95 FME C C N N 96 FME O O N N 97 FME OXT O N N 98 FME H H N N 99 FME HCN H N N 100 FME HA H N N 101 FME HB2 H N N 102 FME HB3 H N N 103 FME HG2 H N N 104 FME HG3 H N N 105 FME HE1 H N N 106 FME HE2 H N N 107 FME HE3 H N N 108 FME HXT H N N 109 GLN N N N N 110 GLN CA C N S 111 GLN C C N N 112 GLN O O N N 113 GLN CB C N N 114 GLN CG C N N 115 GLN CD C N N 116 GLN OE1 O N N 117 GLN NE2 N N N 118 GLN OXT O N N 119 GLN H H N N 120 GLN H2 H N N 121 GLN HA H N N 122 GLN HB2 H N N 123 GLN HB3 H N N 124 GLN HG2 H N N 125 GLN HG3 H N N 126 GLN HE21 H N N 127 GLN HE22 H N N 128 GLN HXT H N N 129 GLU N N N N 130 GLU CA C N S 131 GLU C C N N 132 GLU O O N N 133 GLU CB C N N 134 GLU CG C N N 135 GLU CD C N N 136 GLU OE1 O N N 137 GLU OE2 O N N 138 GLU OXT O N N 139 GLU H H N N 140 GLU H2 H N N 141 GLU HA H N N 142 GLU HB2 H N N 143 GLU HB3 H N N 144 GLU HG2 H N N 145 GLU HG3 H N N 146 GLU HE2 H N N 147 GLU HXT H N N 148 GLY N N N N 149 GLY CA C N N 150 GLY C C N N 151 GLY O O N N 152 GLY OXT O N N 153 GLY H H N N 154 GLY H2 H N N 155 GLY HA2 H N N 156 GLY HA3 H N N 157 GLY HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MET N N N N 231 MET CA C N S 232 MET C C N N 233 MET O O N N 234 MET CB C N N 235 MET CG C N N 236 MET SD S N N 237 MET CE C N N 238 MET OXT O N N 239 MET H H N N 240 MET H2 H N N 241 MET HA H N N 242 MET HB2 H N N 243 MET HB3 H N N 244 MET HG2 H N N 245 MET HG3 H N N 246 MET HE1 H N N 247 MET HE2 H N N 248 MET HE3 H N N 249 MET HXT H N N 250 PHE N N N N 251 PHE CA C N S 252 PHE C C N N 253 PHE O O N N 254 PHE CB C N N 255 PHE CG C Y N 256 PHE CD1 C Y N 257 PHE CD2 C Y N 258 PHE CE1 C Y N 259 PHE CE2 C Y N 260 PHE CZ C Y N 261 PHE OXT O N N 262 PHE H H N N 263 PHE H2 H N N 264 PHE HA H N N 265 PHE HB2 H N N 266 PHE HB3 H N N 267 PHE HD1 H N N 268 PHE HD2 H N N 269 PHE HE1 H N N 270 PHE HE2 H N N 271 PHE HZ H N N 272 PHE HXT H N N 273 PRO N N N N 274 PRO CA C N S 275 PRO C C N N 276 PRO O O N N 277 PRO CB C N N 278 PRO CG C N N 279 PRO CD C N N 280 PRO OXT O N N 281 PRO H H N N 282 PRO HA H N N 283 PRO HB2 H N N 284 PRO HB3 H N N 285 PRO HG2 H N N 286 PRO HG3 H N N 287 PRO HD2 H N N 288 PRO HD3 H N N 289 PRO HXT H N N 290 SER N N N N 291 SER CA C N S 292 SER C C N N 293 SER O O N N 294 SER CB C N N 295 SER OG O N N 296 SER OXT O N N 297 SER H H N N 298 SER H2 H N N 299 SER HA H N N 300 SER HB2 H N N 301 SER HB3 H N N 302 SER HG H N N 303 SER HXT H N N 304 THR N N N N 305 THR CA C N S 306 THR C C N N 307 THR O O N N 308 THR CB C N R 309 THR OG1 O N N 310 THR CG2 C N N 311 THR OXT O N N 312 THR H H N N 313 THR H2 H N N 314 THR HA H N N 315 THR HB H N N 316 THR HG1 H N N 317 THR HG21 H N N 318 THR HG22 H N N 319 THR HG23 H N N 320 THR HXT H N N 321 TYR N N N N 322 TYR CA C N S 323 TYR C C N N 324 TYR O O N N 325 TYR CB C N N 326 TYR CG C Y N 327 TYR CD1 C Y N 328 TYR CD2 C Y N 329 TYR CE1 C Y N 330 TYR CE2 C Y N 331 TYR CZ C Y N 332 TYR OH O N N 333 TYR OXT O N N 334 TYR H H N N 335 TYR H2 H N N 336 TYR HA H N N 337 TYR HB2 H N N 338 TYR HB3 H N N 339 TYR HD1 H N N 340 TYR HD2 H N N 341 TYR HE1 H N N 342 TYR HE2 H N N 343 TYR HH H N N 344 TYR HXT H N N 345 VAL N N N N 346 VAL CA C N S 347 VAL C C N N 348 VAL O O N N 349 VAL CB C N N 350 VAL CG1 C N N 351 VAL CG2 C N N 352 VAL OXT O N N 353 VAL H H N N 354 VAL H2 H N N 355 VAL HA H N N 356 VAL HB H N N 357 VAL HG11 H N N 358 VAL HG12 H N N 359 VAL HG13 H N N 360 VAL HG21 H N N 361 VAL HG22 H N N 362 VAL HG23 H N N 363 VAL HXT H N N 364 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 FME N CN sing N N 83 FME N CA sing N N 84 FME N H sing N N 85 FME CN O1 doub N N 86 FME CN HCN sing N N 87 FME CA CB sing N N 88 FME CA C sing N N 89 FME CA HA sing N N 90 FME CB CG sing N N 91 FME CB HB2 sing N N 92 FME CB HB3 sing N N 93 FME CG SD sing N N 94 FME CG HG2 sing N N 95 FME CG HG3 sing N N 96 FME SD CE sing N N 97 FME CE HE1 sing N N 98 FME CE HE2 sing N N 99 FME CE HE3 sing N N 100 FME C O doub N N 101 FME C OXT sing N N 102 FME OXT HXT sing N N 103 GLN N CA sing N N 104 GLN N H sing N N 105 GLN N H2 sing N N 106 GLN CA C sing N N 107 GLN CA CB sing N N 108 GLN CA HA sing N N 109 GLN C O doub N N 110 GLN C OXT sing N N 111 GLN CB CG sing N N 112 GLN CB HB2 sing N N 113 GLN CB HB3 sing N N 114 GLN CG CD sing N N 115 GLN CG HG2 sing N N 116 GLN CG HG3 sing N N 117 GLN CD OE1 doub N N 118 GLN CD NE2 sing N N 119 GLN NE2 HE21 sing N N 120 GLN NE2 HE22 sing N N 121 GLN OXT HXT sing N N 122 GLU N CA sing N N 123 GLU N H sing N N 124 GLU N H2 sing N N 125 GLU CA C sing N N 126 GLU CA CB sing N N 127 GLU CA HA sing N N 128 GLU C O doub N N 129 GLU C OXT sing N N 130 GLU CB CG sing N N 131 GLU CB HB2 sing N N 132 GLU CB HB3 sing N N 133 GLU CG CD sing N N 134 GLU CG HG2 sing N N 135 GLU CG HG3 sing N N 136 GLU CD OE1 doub N N 137 GLU CD OE2 sing N N 138 GLU OE2 HE2 sing N N 139 GLU OXT HXT sing N N 140 GLY N CA sing N N 141 GLY N H sing N N 142 GLY N H2 sing N N 143 GLY CA C sing N N 144 GLY CA HA2 sing N N 145 GLY CA HA3 sing N N 146 GLY C O doub N N 147 GLY C OXT sing N N 148 GLY OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TYR N CA sing N N 306 TYR N H sing N N 307 TYR N H2 sing N N 308 TYR CA C sing N N 309 TYR CA CB sing N N 310 TYR CA HA sing N N 311 TYR C O doub N N 312 TYR C OXT sing N N 313 TYR CB CG sing N N 314 TYR CB HB2 sing N N 315 TYR CB HB3 sing N N 316 TYR CG CD1 doub Y N 317 TYR CG CD2 sing Y N 318 TYR CD1 CE1 sing Y N 319 TYR CD1 HD1 sing N N 320 TYR CD2 CE2 doub Y N 321 TYR CD2 HD2 sing N N 322 TYR CE1 CZ doub Y N 323 TYR CE1 HE1 sing N N 324 TYR CE2 CZ sing Y N 325 TYR CE2 HE2 sing N N 326 TYR CZ OH sing N N 327 TYR OH HH sing N N 328 TYR OXT HXT sing N N 329 VAL N CA sing N N 330 VAL N H sing N N 331 VAL N H2 sing N N 332 VAL CA C sing N N 333 VAL CA CB sing N N 334 VAL CA HA sing N N 335 VAL C O doub N N 336 VAL C OXT sing N N 337 VAL CB CG1 sing N N 338 VAL CB CG2 sing N N 339 VAL CB HB sing N N 340 VAL CG1 HG11 sing N N 341 VAL CG1 HG12 sing N N 342 VAL CG1 HG13 sing N N 343 VAL CG2 HG21 sing N N 344 VAL CG2 HG22 sing N N 345 VAL CG2 HG23 sing N N 346 VAL OXT HXT sing N N 347 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3U2F _pdbx_initial_refinement_model.details 'PDB entry 3U2F' # _atom_sites.entry_id 3U2Y _atom_sites.fract_transf_matrix[1][1] 0.018470 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018470 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004084 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_