HEADER PROTEIN BINDING 06-OCT-11 3U3N TITLE CRYSTAL STRUCTURE OF TABLYSIN-15 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TABLYSIN 15; COMPND 3 CHAIN: C; COMPND 4 FRAGMENT: UNP RESIDUES 24-255; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TABANUS YAO; SOURCE 3 ORGANISM_TAXID: 485572; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSE; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET17B KEYWDS CAP DOMAIN, BINDING PROTEIN, ALPHAVBETA3 INTEGRIN, SALIVARY GLAND, KEYWDS 2 PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR J.F.ANDERSEN REVDAT 5 08-NOV-17 3U3N 1 REMARK REVDAT 4 28-JAN-15 3U3N 1 HETATM REVDAT 3 17-OCT-12 3U3N 1 JRNL REVDAT 2 23-MAY-12 3U3N 1 JRNL REVDAT 1 15-FEB-12 3U3N 0 JRNL AUTH X.XU,I.M.FRANCISCHETTI,R.LAI,J.M.RIBEIRO,J.F.ANDERSEN JRNL TITL STRUCTURE OF PROTEIN HAVING INHIBITORY DISINTEGRIN AND JRNL TITL 2 LEUKOTRIENE SCAVENGING FUNCTIONS CONTAINED IN SINGLE DOMAIN. JRNL REF J.BIOL.CHEM. V. 287 10967 2012 JRNL REFN ISSN 0021-9258 JRNL PMID 22311975 JRNL DOI 10.1074/JBC.M112.340471 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.1_743 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 28988 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1472 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.2713 - 3.6705 0.92 2507 118 0.1781 0.2098 REMARK 3 2 3.6705 - 2.9140 0.93 2411 123 0.1818 0.2207 REMARK 3 3 2.9140 - 2.5458 1.00 2554 158 0.2013 0.2719 REMARK 3 4 2.5458 - 2.3131 1.00 2529 128 0.1872 0.1971 REMARK 3 5 2.3131 - 2.1474 0.98 2472 150 0.1927 0.2125 REMARK 3 6 2.1474 - 2.0208 1.00 2539 126 0.1838 0.2021 REMARK 3 7 2.0208 - 1.9196 1.00 2497 147 0.1904 0.2204 REMARK 3 8 1.9196 - 1.8360 1.00 2504 126 0.2037 0.2355 REMARK 3 9 1.8360 - 1.7654 1.00 2511 143 0.1962 0.2396 REMARK 3 10 1.7654 - 1.7045 1.00 2485 121 0.2238 0.2399 REMARK 3 11 1.7045 - 1.6512 1.00 2507 132 0.2578 0.2953 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 32.67 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.440 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.360 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.22 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.05480 REMARK 3 B22 (A**2) : -0.05480 REMARK 3 B33 (A**2) : 0.10970 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 1897 REMARK 3 ANGLE : 0.964 2577 REMARK 3 CHIRALITY : 0.066 268 REMARK 3 PLANARITY : 0.004 335 REMARK 3 DIHEDRAL : 15.196 733 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'C' AND (RESSEQ 3:22) REMARK 3 ORIGIN FOR THE GROUP (A): -20.0827 -11.0093 -10.6046 REMARK 3 T TENSOR REMARK 3 T11: 0.1387 T22: 0.1294 REMARK 3 T33: 0.1189 T12: -0.0078 REMARK 3 T13: -0.0149 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 2.3011 L22: 2.8867 REMARK 3 L33: 3.5689 L12: -1.0051 REMARK 3 L13: -0.1164 L23: -1.1874 REMARK 3 S TENSOR REMARK 3 S11: 0.0885 S12: 0.1399 S13: -0.2340 REMARK 3 S21: -0.2174 S22: -0.0778 S23: 0.1743 REMARK 3 S31: 0.3896 S32: -0.1934 S33: -0.0869 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'C' AND (RESSEQ 23:38) REMARK 3 ORIGIN FOR THE GROUP (A): -18.193 -13.817 11.153 REMARK 3 T TENSOR REMARK 3 T11: 0.1375 T22: 0.2163 REMARK 3 T33: 0.1970 T12: 0.0572 REMARK 3 T13: 0.0136 T23: 0.0789 REMARK 3 L TENSOR REMARK 3 L11: 2.2494 L22: 1.7547 REMARK 3 L33: 2.3529 L12: -1.2538 REMARK 3 L13: -0.6302 L23: 0.9208 REMARK 3 S TENSOR REMARK 3 S11: -0.1420 S12: -0.3787 S13: -0.2110 REMARK 3 S21: 0.2027 S22: 0.3995 S23: 0.1686 REMARK 3 S31: 0.2262 S32: 0.2562 S33: 0.0677 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'C' AND (RESSEQ 39:75) REMARK 3 ORIGIN FOR THE GROUP (A): -28.8954 9.5623 8.9255 REMARK 3 T TENSOR REMARK 3 T11: 0.2279 T22: 0.1730 REMARK 3 T33: 0.1359 T12: 0.0548 REMARK 3 T13: 0.0794 T23: -0.0107 REMARK 3 L TENSOR REMARK 3 L11: 2.0054 L22: 2.4647 REMARK 3 L33: 2.0188 L12: -0.5923 REMARK 3 L13: 0.1295 L23: -0.2238 REMARK 3 S TENSOR REMARK 3 S11: -0.0541 S12: -0.3634 S13: 0.2166 REMARK 3 S21: 0.2623 S22: 0.1332 S23: 0.1144 REMARK 3 S31: -0.6415 S32: -0.0401 S33: -0.1710 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'C' AND (RESSEQ 76:105) REMARK 3 ORIGIN FOR THE GROUP (A): -20.8779 -5.8112 -2.6485 REMARK 3 T TENSOR REMARK 3 T11: 0.1023 T22: 0.0998 REMARK 3 T33: 0.1020 T12: -0.0036 REMARK 3 T13: -0.0062 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 2.0772 L22: 1.1844 REMARK 3 L33: 2.0665 L12: -1.3191 REMARK 3 L13: 0.3248 L23: -0.8403 REMARK 3 S TENSOR REMARK 3 S11: -0.0081 S12: 0.0414 S13: 0.0040 REMARK 3 S21: -0.0286 S22: -0.0355 S23: -0.0474 REMARK 3 S31: 0.1167 S32: 0.0731 S33: -0.0678 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'C' AND (RESSEQ 106:119) REMARK 3 ORIGIN FOR THE GROUP (A): -14.486 -4.979 16.488 REMARK 3 T TENSOR REMARK 3 T11: 0.1732 T22: 0.2905 REMARK 3 T33: 0.0791 T12: 0.0768 REMARK 3 T13: -0.0216 T23: 0.0032 REMARK 3 L TENSOR REMARK 3 L11: 1.5248 L22: 1.2786 REMARK 3 L33: 2.1831 L12: -0.5948 REMARK 3 L13: 0.6826 L23: -0.4733 REMARK 3 S TENSOR REMARK 3 S11: -0.1455 S12: -0.4924 S13: -0.0382 REMARK 3 S21: 0.3801 S22: 0.2248 S23: -0.0901 REMARK 3 S31: 0.0747 S32: 0.4122 S33: 0.0548 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'C' AND (RESSEQ 120:136) REMARK 3 ORIGIN FOR THE GROUP (A): -16.546 7.864 14.664 REMARK 3 T TENSOR REMARK 3 T11: 0.3022 T22: 0.4195 REMARK 3 T33: 0.1828 T12: 0.0344 REMARK 3 T13: -0.0640 T23: -0.1142 REMARK 3 L TENSOR REMARK 3 L11: 2.2156 L22: 4.6896 REMARK 3 L33: 2.8671 L12: 0.4120 REMARK 3 L13: -0.6092 L23: -1.5423 REMARK 3 S TENSOR REMARK 3 S11: -0.1415 S12: -0.6108 S13: 0.4108 REMARK 3 S21: 0.6229 S22: 0.1567 S23: -0.2067 REMARK 3 S31: -0.5814 S32: 0.4512 S33: -0.0403 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESSEQ 137:155) REMARK 3 ORIGIN FOR THE GROUP (A): -14.3955 17.6465 1.7344 REMARK 3 T TENSOR REMARK 3 T11: 0.4231 T22: 0.1654 REMARK 3 T33: 0.5551 T12: -0.2535 REMARK 3 T13: 0.1915 T23: -0.0831 REMARK 3 L TENSOR REMARK 3 L11: 0.9516 L22: 1.6715 REMARK 3 L33: 0.7518 L12: 0.0155 REMARK 3 L13: 0.1792 L23: -0.0323 REMARK 3 S TENSOR REMARK 3 S11: 0.0799 S12: -0.0110 S13: 0.4301 REMARK 3 S21: 0.0650 S22: -0.0181 S23: -0.2617 REMARK 3 S31: -0.3514 S32: 0.1448 S33: 0.0755 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESSEQ 156:190) REMARK 3 ORIGIN FOR THE GROUP (A): -17.9854 -1.1622 7.1454 REMARK 3 T TENSOR REMARK 3 T11: 0.0633 T22: 0.1400 REMARK 3 T33: 0.0316 T12: 0.0293 REMARK 3 T13: -0.0100 T23: -0.0092 REMARK 3 L TENSOR REMARK 3 L11: 1.5330 L22: 1.5401 REMARK 3 L33: 1.5565 L12: -0.8882 REMARK 3 L13: 0.0975 L23: -0.4270 REMARK 3 S TENSOR REMARK 3 S11: -0.0774 S12: -0.2892 S13: 0.1063 REMARK 3 S21: 0.1771 S22: 0.1915 S23: -0.0667 REMARK 3 S31: -0.1102 S32: 0.2457 S33: 0.0346 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESSEQ 191:210) REMARK 3 ORIGIN FOR THE GROUP (A): -25.1293 17.1044 -2.4135 REMARK 3 T TENSOR REMARK 3 T11: 0.4751 T22: 0.0900 REMARK 3 T33: 0.2857 T12: 0.0516 REMARK 3 T13: 0.1827 T23: 0.0743 REMARK 3 L TENSOR REMARK 3 L11: 0.8141 L22: 1.1152 REMARK 3 L33: 1.3434 L12: 0.0211 REMARK 3 L13: -0.1396 L23: -0.3435 REMARK 3 S TENSOR REMARK 3 S11: 0.3241 S12: 0.0786 S13: 0.5659 REMARK 3 S21: 0.0183 S22: -0.0824 S23: -0.1002 REMARK 3 S31: -0.8076 S32: -0.1753 S33: -0.1730 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESSEQ 211:234) REMARK 3 ORIGIN FOR THE GROUP (A): -35.201 9.112 2.501 REMARK 3 T TENSOR REMARK 3 T11: 0.2414 T22: 0.2254 REMARK 3 T33: 0.2039 T12: 0.0898 REMARK 3 T13: 0.0820 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 0.8734 L22: 0.7697 REMARK 3 L33: 2.1456 L12: -0.7746 REMARK 3 L13: -0.8248 L23: 1.0585 REMARK 3 S TENSOR REMARK 3 S11: 0.1669 S12: 0.1664 S13: 0.1297 REMARK 3 S21: -0.0095 S22: -0.1620 S23: 0.3182 REMARK 3 S31: -0.6097 S32: -0.5874 S33: -0.0752 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3U3N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-OCT-11. REMARK 100 THE DEPOSITION ID IS D_1000068264. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-OCT-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99999 REMARK 200 MONOCHROMATOR : SI (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29066 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 13.90 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 10.00 REMARK 200 R MERGE FOR SHELL (I) : 0.51700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10 % PEG 6000, 100 MM CITRATE, 13 MM REMARK 280 PRASEODYMIUM (III) ACETATE, PH 5.6, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 28.71067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 57.42133 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 57.42133 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 28.71067 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -28.71067 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET C 0 REMARK 465 ASN C 147 REMARK 465 GLY C 148 REMARK 465 PRO C 149 REMARK 465 ASN C 150 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG C 66 63.55 -156.29 REMARK 500 ARG C 95 22.52 -143.61 REMARK 500 VAL C 153 -3.13 -142.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PR C 301 PR REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 34 OE2 REMARK 620 2 HOH C 612 O 80.2 REMARK 620 3 CIT C 302 O4 82.5 64.5 REMARK 620 4 CIT C 303 O7 68.5 127.8 143.4 REMARK 620 5 CIT C 303 O2 131.9 138.2 134.0 64.3 REMARK 620 6 HOH C 550 O 137.3 57.2 81.5 135.1 85.9 REMARK 620 7 CIT C 302 O7 131.5 107.2 60.7 124.9 73.3 70.6 REMARK 620 8 CIT C 303 O6 93.8 79.3 143.7 63.0 73.3 77.1 134.6 REMARK 620 9 CIT C 302 O6 84.5 139.2 76.2 79.1 78.1 128.9 58.3 139.6 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PR C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT C 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLM C 304 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3U3U RELATED DB: PDB REMARK 900 RELATED ID: 3U31 RELATED DB: PDB DBREF 3U3N C 1 232 UNP F8QQG5 F8QQG5_9DIPT 24 255 SEQADV 3U3N MET C 0 UNP F8QQG5 EXPRESSION TAG SEQADV 3U3N GLU C 142 UNP F8QQG5 GLY 165 CONFLICT SEQADV 3U3N GLU C 175 UNP F8QQG5 GLN 198 CONFLICT SEQADV 3U3N SER C 221 UNP F8QQG5 PRO 244 CONFLICT SEQRES 1 C 233 MET VAL ASN TYR CYS ARG LEU PRO CYS ARG GLY ASP ASN SEQRES 2 C 233 TYR HIS VAL GLY CYS GLY GLU PRO ALA TYR ALA GLN GLU SEQRES 3 C 233 CYS GLY GLN SER PRO ARG THR ARG GLU LEU LEU LYS GLU SEQRES 4 C 233 HIS ARG ASN GLU ILE LEU SER LYS ILE ASN ASP VAL ARG SEQRES 5 C 233 ASP HIS VAL ALA LYS GLY SER TRP GLY LEU PRO VAL ALA SEQRES 6 C 233 ALA ARG MET LYS VAL VAL VAL TRP ASP ALA GLU LEU ALA SEQRES 7 C 233 GLY LEU ALA LYS ARG HIS THR LYS GLY CYS VAL GLY GLU SEQRES 8 C 233 THR HIS ALA CYS ARG ASN THR GLU ARG PHE TRP LEU PRO SEQRES 9 C 233 GLY GLN LEU ASN PHE LYS TYR SER GLY ASP LYS LEU PRO SEQRES 10 C 233 ARG ILE LYS GLU LEU ILE ASP ASP ALA VAL LYS LYS GLY SEQRES 11 C 233 HIS LEU GLN LYS HIS ASN ILE THR ARG GLU ILE ILE GLU SEQRES 12 C 233 ASN TYR ARG GLU ASN GLY PRO ASN GLY ASP VAL LYS GLU SEQRES 13 C 233 LEU ALA LEU ALA ILE SER ASP ARG VAL THR ALA VAL GLY SEQRES 14 C 233 CYS GLY LEU THR THR TRP GLU ASP GLY ALA LYS ALA ARG SEQRES 15 C 233 ALA LEU LEU THR CYS ASN PHE SER SER GLN ASN THR ARG SEQRES 16 C 233 GLY ARG PRO VAL TYR LYS ILE GLY ASN SER PRO GLY GLU SEQRES 17 C 233 LYS CYS ILE GLU LYS ASP GLU THR TYR LYS ASN LEU CYS SEQRES 18 C 233 SER ALA THR GLU PRO ILE ASP PRO ASN LYS SER ASN HET PR C 301 1 HET CIT C 302 13 HET CIT C 303 13 HET PLM C 304 18 HETNAM PR PRASEODYMIUM ION HETNAM CIT CITRIC ACID HETNAM PLM PALMITIC ACID FORMUL 2 PR PR 3+ FORMUL 3 CIT 2(C6 H8 O7) FORMUL 5 PLM C16 H32 O2 FORMUL 6 HOH *215(H2 O) HELIX 1 1 ASN C 2 LEU C 6 5 5 HELIX 2 2 ALA C 23 GLY C 27 5 5 HELIX 3 3 LEU C 36 LYS C 56 1 21 HELIX 4 4 ASP C 73 LYS C 85 1 13 HELIX 5 5 ARG C 117 LEU C 131 1 15 HELIX 6 6 GLN C 132 ASN C 135 5 4 HELIX 7 7 THR C 137 ASN C 143 1 7 HELIX 8 8 VAL C 153 ILE C 160 1 8 SHEET 1 A 3 ARG C 31 THR C 32 0 SHEET 2 A 3 ALA C 166 ASP C 176 -1 O THR C 173 N ARG C 31 SHEET 3 A 3 VAL C 71 TRP C 72 1 N VAL C 71 O VAL C 167 SHEET 1 B 4 ARG C 31 THR C 32 0 SHEET 2 B 4 ALA C 166 ASP C 176 -1 O THR C 173 N ARG C 31 SHEET 3 B 4 LYS C 179 PHE C 188 -1 O ARG C 181 N TRP C 174 SHEET 4 B 4 GLY C 104 GLY C 112 -1 N GLY C 112 O ALA C 180 SSBOND 1 CYS C 4 CYS C 17 1555 1555 2.04 SSBOND 2 CYS C 8 CYS C 94 1555 1555 2.01 SSBOND 3 CYS C 26 CYS C 87 1555 1555 2.04 SSBOND 4 CYS C 169 CYS C 186 1555 1555 2.06 SSBOND 5 CYS C 209 CYS C 220 1555 1555 2.03 LINK OE2 GLU C 34 PR PR C 301 1555 1555 2.34 LINK PR PR C 301 O HOH C 612 1555 1555 2.36 LINK PR PR C 301 O4 CIT C 302 1555 1555 2.38 LINK PR PR C 301 O7 CIT C 303 1555 1555 2.44 LINK PR PR C 301 O2 CIT C 303 1555 1555 2.44 LINK PR PR C 301 O HOH C 550 1555 1555 2.60 LINK PR PR C 301 O7 CIT C 302 1555 1555 2.65 LINK PR PR C 301 O6 CIT C 303 1555 1555 2.67 LINK PR PR C 301 O6 CIT C 302 1555 1555 2.80 SITE 1 AC1 5 GLU C 34 CIT C 302 CIT C 303 HOH C 550 SITE 2 AC1 5 HOH C 612 SITE 1 AC2 11 GLU C 34 LEU C 36 LYS C 37 ARG C 40 SITE 2 AC2 11 LYS C 217 PR C 301 CIT C 303 HOH C 543 SITE 3 AC2 11 HOH C 550 HOH C 555 HOH C 612 SITE 1 AC3 7 GLU C 34 LYS C 81 LYS C 200 LYS C 208 SITE 2 AC3 7 PR C 301 CIT C 302 HOH C 547 SITE 1 AC4 3 LYS C 46 VAL C 50 HIS C 53 CRYST1 69.598 69.598 86.132 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014368 0.008296 0.000000 0.00000 SCALE2 0.000000 0.016591 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011610 0.00000