HEADER OXIDOREDUCTASE 07-OCT-11 3U4C TITLE CRYSTAL STRUCTURE OF YWFH, NADPH DEPENDENT REDUCTASE INVOLVED IN TITLE 2 BACILYSIN BIOSYNTHESIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: BACILYSIN BIOSYNTHESIS OXIDOREDUCTASE YWFH; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 STRAIN: 168; SOURCE 5 GENE: BSU37680, IPA-86R, YWFH; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-15B KEYWDS NADPH BINDING MOTIF, ROSSMANN FOLD, SDR SUPERFAMILY, OXIDOREDUCTASE, KEYWDS 2 BACILYSIN BIOSYNTHESIS EXPDTA X-RAY DIFFRACTION AUTHOR M.RAJAVEL,B.GOPAL REVDAT 5 20-MAR-24 3U4C 1 REMARK SEQADV REVDAT 4 07-FEB-18 3U4C 1 REMARK REVDAT 3 18-FEB-15 3U4C 1 REMARK REVDAT 2 12-MAR-14 3U4C 1 JRNL REVDAT 1 06-MAR-13 3U4C 0 JRNL AUTH M.RAJAVEL,K.PERINBAM,B.GOPAL JRNL TITL STRUCTURAL INSIGHTS INTO THE ROLE OF BACILLUS SUBTILIS YWFH JRNL TITL 2 (BACG) IN TETRAHYDROTYROSINE SYNTHESIS JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 69 324 2013 JRNL REFN ISSN 0907-4449 JRNL PMID 23519407 JRNL DOI 10.1107/S0907444912046690 REMARK 2 REMARK 2 RESOLUTION. 2.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.68 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.3 REMARK 3 NUMBER OF REFLECTIONS : 18377 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.160 REMARK 3 FREE R VALUE TEST SET COUNT : 949 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 22.6855 - 3.8778 0.99 2922 147 0.1720 0.2020 REMARK 3 2 3.8778 - 3.0803 0.87 2372 138 0.1881 0.2387 REMARK 3 3 3.0803 - 2.6917 0.99 2668 145 0.1901 0.2324 REMARK 3 4 2.6917 - 2.4459 0.98 2613 143 0.2060 0.2661 REMARK 3 5 2.4459 - 2.2708 0.92 2418 146 0.2639 0.2975 REMARK 3 6 2.2708 - 2.1370 0.79 2088 102 0.3490 0.4006 REMARK 3 7 2.1370 - 2.0300 0.90 2347 128 0.2863 0.3271 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 45.26 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.050 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.69440 REMARK 3 B22 (A**2) : 1.69440 REMARK 3 B33 (A**2) : -3.38880 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2007 REMARK 3 ANGLE : 1.123 2717 REMARK 3 CHIRALITY : 0.070 312 REMARK 3 PLANARITY : 0.004 350 REMARK 3 DIHEDRAL : 16.063 788 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 2:13) REMARK 3 ORIGIN FOR THE GROUP (A): -35.2091 26.4782 16.8885 REMARK 3 T TENSOR REMARK 3 T11: 0.5237 T22: 0.1833 REMARK 3 T33: 0.3476 T12: 0.0108 REMARK 3 T13: 0.0608 T23: -0.0694 REMARK 3 L TENSOR REMARK 3 L11: 0.5142 L22: 0.3244 REMARK 3 L33: 0.2355 L12: -0.0051 REMARK 3 L13: -0.0246 L23: 0.3476 REMARK 3 S TENSOR REMARK 3 S11: 0.1187 S12: -0.3258 S13: 1.0664 REMARK 3 S21: -0.4041 S22: -0.0496 S23: -0.6763 REMARK 3 S31: -0.6125 S32: 0.2377 S33: 0.0114 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 14:80) REMARK 3 ORIGIN FOR THE GROUP (A): -32.5502 27.7988 21.8178 REMARK 3 T TENSOR REMARK 3 T11: 0.5087 T22: 0.2248 REMARK 3 T33: 0.2901 T12: -0.0121 REMARK 3 T13: 0.0853 T23: -0.0993 REMARK 3 L TENSOR REMARK 3 L11: 1.5888 L22: 1.3805 REMARK 3 L33: 1.6847 L12: -0.1024 REMARK 3 L13: 0.4227 L23: 1.1125 REMARK 3 S TENSOR REMARK 3 S11: 0.0981 S12: -0.1301 S13: 0.4523 REMARK 3 S21: 0.3535 S22: 0.1284 S23: 0.0021 REMARK 3 S31: -0.3216 S32: 0.1156 S33: 0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 81:131) REMARK 3 ORIGIN FOR THE GROUP (A): -35.0424 10.4669 20.8879 REMARK 3 T TENSOR REMARK 3 T11: 0.3237 T22: 0.2184 REMARK 3 T33: 0.2482 T12: 0.0741 REMARK 3 T13: 0.0079 T23: -0.0443 REMARK 3 L TENSOR REMARK 3 L11: 0.5525 L22: 1.5103 REMARK 3 L33: 0.5921 L12: 0.9034 REMARK 3 L13: 0.0136 L23: 0.5956 REMARK 3 S TENSOR REMARK 3 S11: -0.0063 S12: -0.2698 S13: 0.1025 REMARK 3 S21: 0.5544 S22: 0.2683 S23: -0.2847 REMARK 3 S31: -0.1230 S32: 0.0198 S33: 0.0002 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 132:151) REMARK 3 ORIGIN FOR THE GROUP (A): -32.4380 10.1880 10.1236 REMARK 3 T TENSOR REMARK 3 T11: 0.2415 T22: 0.2798 REMARK 3 T33: 0.3856 T12: 0.1001 REMARK 3 T13: 0.0058 T23: -0.0770 REMARK 3 L TENSOR REMARK 3 L11: 0.7892 L22: 1.0644 REMARK 3 L33: 0.9045 L12: -0.3792 REMARK 3 L13: 0.2725 L23: -1.1367 REMARK 3 S TENSOR REMARK 3 S11: 0.6214 S12: 0.4417 S13: -0.5424 REMARK 3 S21: -0.4822 S22: -0.3796 S23: -0.2241 REMARK 3 S31: -0.1809 S32: 0.6791 S33: 0.0796 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 152:175) REMARK 3 ORIGIN FOR THE GROUP (A): -39.0799 6.4186 12.6174 REMARK 3 T TENSOR REMARK 3 T11: 0.2559 T22: 0.1956 REMARK 3 T33: 0.2843 T12: 0.0275 REMARK 3 T13: 0.0236 T23: 0.0121 REMARK 3 L TENSOR REMARK 3 L11: -0.0034 L22: 0.7918 REMARK 3 L33: 0.1795 L12: -0.2321 REMARK 3 L13: 0.1071 L23: 0.1070 REMARK 3 S TENSOR REMARK 3 S11: 0.2745 S12: -0.4350 S13: 0.2872 REMARK 3 S21: -0.2754 S22: 0.0320 S23: -0.1105 REMARK 3 S31: 0.2575 S32: -0.2751 S33: 0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 176:194) REMARK 3 ORIGIN FOR THE GROUP (A): -26.4952 15.4008 10.7900 REMARK 3 T TENSOR REMARK 3 T11: 0.3313 T22: 0.2894 REMARK 3 T33: 0.2878 T12: 0.0880 REMARK 3 T13: -0.0620 T23: -0.0825 REMARK 3 L TENSOR REMARK 3 L11: 0.2012 L22: 0.4704 REMARK 3 L33: 0.7928 L12: 0.1468 REMARK 3 L13: -0.2148 L23: 0.3974 REMARK 3 S TENSOR REMARK 3 S11: -0.6013 S12: -0.1055 S13: 0.1846 REMARK 3 S21: 0.3811 S22: 0.5258 S23: -0.1433 REMARK 3 S31: -0.0931 S32: 0.3985 S33: -0.0009 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 195:225) REMARK 3 ORIGIN FOR THE GROUP (A): -10.6791 11.0699 6.8131 REMARK 3 T TENSOR REMARK 3 T11: 0.3853 T22: 0.8339 REMARK 3 T33: 0.5755 T12: 0.1610 REMARK 3 T13: -0.2004 T23: -0.2989 REMARK 3 L TENSOR REMARK 3 L11: 0.1826 L22: -0.0694 REMARK 3 L33: 0.1213 L12: 0.0186 REMARK 3 L13: 0.2071 L23: -0.0233 REMARK 3 S TENSOR REMARK 3 S11: 0.0873 S12: -0.4703 S13: 0.5230 REMARK 3 S21: 0.4058 S22: 0.4869 S23: -0.7900 REMARK 3 S31: -0.0190 S32: 1.2133 S33: 0.0205 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 226:259) REMARK 3 ORIGIN FOR THE GROUP (A): -33.4973 17.3582 2.6604 REMARK 3 T TENSOR REMARK 3 T11: 0.3185 T22: 0.2362 REMARK 3 T33: 0.2762 T12: -0.0099 REMARK 3 T13: 0.0580 T23: -0.0114 REMARK 3 L TENSOR REMARK 3 L11: 0.4919 L22: 0.9068 REMARK 3 L33: 0.8909 L12: 0.1172 REMARK 3 L13: 0.2568 L23: -0.5956 REMARK 3 S TENSOR REMARK 3 S11: 0.2554 S12: -0.0073 S13: 0.0730 REMARK 3 S21: -0.0894 S22: 0.0296 S23: -0.0412 REMARK 3 S31: -0.1896 S32: 0.0168 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3U4C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-OCT-11. REMARK 100 THE DEPOSITION ID IS D_1000068289. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR-H REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRROR REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19411 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.030 REMARK 200 RESOLUTION RANGE LOW (A) : 22.684 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 17.20 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.6 REMARK 200 DATA REDUNDANCY IN SHELL : 12.60 REMARK 200 R MERGE FOR SHELL (I) : 0.57400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES, 1.4M TRI-SODIUM CITRATE REMARK 280 DIHYDRATE, PH 7.5, MICROBATCH, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 137.99267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 68.99633 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 137.99267 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 68.99633 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 137.99267 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 68.99633 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 137.99267 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 68.99633 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -69.30100 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 321 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 204 REMARK 465 ILE A 205 REMARK 465 SER A 206 REMARK 465 LYS A 207 REMARK 465 LEU A 260 REMARK 465 GLU A 261 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 3 78.22 -100.66 REMARK 500 VAL A 140 -96.62 -113.62 REMARK 500 ASN A 198 -0.97 -52.61 REMARK 500 MET A 200 -10.63 -46.99 REMARK 500 LYS A 201 76.69 -51.87 REMARK 500 LYS A 202 -32.33 154.75 REMARK 500 ALA A 241 39.38 -89.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP A 262 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3U49 RELATED DB: PDB REMARK 900 RELATED ID: 3U4D RELATED DB: PDB DBREF 3U4C A 1 259 UNP P39644 YWFH_BACSU 1 259 SEQADV 3U4C MET A -19 UNP P39644 EXPRESSION TAG SEQADV 3U4C GLY A -18 UNP P39644 EXPRESSION TAG SEQADV 3U4C SER A -17 UNP P39644 EXPRESSION TAG SEQADV 3U4C SER A -16 UNP P39644 EXPRESSION TAG SEQADV 3U4C HIS A -15 UNP P39644 EXPRESSION TAG SEQADV 3U4C HIS A -14 UNP P39644 EXPRESSION TAG SEQADV 3U4C HIS A -13 UNP P39644 EXPRESSION TAG SEQADV 3U4C HIS A -12 UNP P39644 EXPRESSION TAG SEQADV 3U4C HIS A -11 UNP P39644 EXPRESSION TAG SEQADV 3U4C HIS A -10 UNP P39644 EXPRESSION TAG SEQADV 3U4C SER A -9 UNP P39644 EXPRESSION TAG SEQADV 3U4C SER A -8 UNP P39644 EXPRESSION TAG SEQADV 3U4C GLY A -7 UNP P39644 EXPRESSION TAG SEQADV 3U4C LEU A -6 UNP P39644 EXPRESSION TAG SEQADV 3U4C VAL A -5 UNP P39644 EXPRESSION TAG SEQADV 3U4C PRO A -4 UNP P39644 EXPRESSION TAG SEQADV 3U4C ARG A -3 UNP P39644 EXPRESSION TAG SEQADV 3U4C GLY A -2 UNP P39644 EXPRESSION TAG SEQADV 3U4C SER A -1 UNP P39644 EXPRESSION TAG SEQADV 3U4C HIS A 0 UNP P39644 EXPRESSION TAG SEQADV 3U4C LEU A 260 UNP P39644 CLONING ARTIFACT SEQADV 3U4C GLU A 261 UNP P39644 CLONING ARTIFACT SEQRES 1 A 281 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 281 LEU VAL PRO ARG GLY SER HIS MET SER LYS ARG THR ALA SEQRES 3 A 281 PHE VAL MET GLY ALA SER GLN GLY ILE GLY LYS ALA ILE SEQRES 4 A 281 ALA LEU LYS LEU ALA ASP GLN HIS PHE SER LEU VAL ILE SEQRES 5 A 281 ASN SER ARG ASN LEU ASP ASN ILE GLU SER VAL LYS GLU SEQRES 6 A 281 ASP ILE LEU ALA LYS HIS PRO GLU ALA SER VAL ILE VAL SEQRES 7 A 281 LEU ALA GLY ASP MET SER ASP GLN HIS THR ARG ALA GLY SEQRES 8 A 281 ILE PHE GLN LYS ILE GLU SER GLN CYS GLY ARG LEU ASP SEQRES 9 A 281 VAL LEU ILE ASN ASN ILE PRO GLY GLY ALA PRO ASP THR SEQRES 10 A 281 PHE ASP ASN CYS ASN ILE GLU ASP MET THR ALA THR PHE SEQRES 11 A 281 THR GLN LYS THR VAL ALA TYR ILE ASP ALA ILE LYS ARG SEQRES 12 A 281 ALA SER SER LEU MET LYS GLN ASN GLU PHE GLY ARG ILE SEQRES 13 A 281 ILE ASN ILE VAL GLY ASN LEU TRP LYS GLU PRO GLY ALA SEQRES 14 A 281 ASN MET PHE THR ASN SER MET MET ASN ALA ALA LEU ILE SEQRES 15 A 281 ASN ALA SER LYS ASN ILE SER ILE GLN LEU ALA PRO HIS SEQRES 16 A 281 ASN ILE THR VAL ASN CYS LEU ASN PRO GLY PHE ILE ALA SEQRES 17 A 281 THR ASP ARG TYR HIS GLN PHE VAL GLU ASN VAL MET LYS SEQRES 18 A 281 LYS ASN SER ILE SER LYS GLN LYS ALA GLU GLU GLN ILE SEQRES 19 A 281 ALA SER GLY ILE PRO MET LYS ARG VAL GLY SER ALA GLU SEQRES 20 A 281 GLU THR ALA ALA LEU ALA ALA PHE LEU ALA SER GLU GLU SEQRES 21 A 281 ALA SER TYR ILE THR GLY GLN GLN ILE SER ALA ASP GLY SEQRES 22 A 281 GLY SER MET LYS SER ILE LEU GLU HET NDP A 262 48 HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE FORMUL 2 NDP C21 H30 N7 O17 P3 FORMUL 3 HOH *72(H2 O) HELIX 1 1 GLN A 13 GLN A 26 1 14 HELIX 2 2 ASN A 36 HIS A 51 1 16 HELIX 3 3 ASP A 65 GLY A 81 1 17 HELIX 4 4 ASN A 102 LYS A 113 1 12 HELIX 5 5 LYS A 113 GLN A 130 1 18 HELIX 6 6 GLY A 141 LYS A 145 5 5 HELIX 7 7 MET A 151 ALA A 173 1 23 HELIX 8 8 THR A 189 VAL A 199 1 11 HELIX 9 9 LYS A 209 GLY A 217 1 9 HELIX 10 10 SER A 225 SER A 238 1 14 SHEET 1 A 7 VAL A 56 VAL A 58 0 SHEET 2 A 7 SER A 29 ILE A 32 1 N LEU A 30 O ILE A 57 SHEET 3 A 7 THR A 5 VAL A 8 1 N ALA A 6 O SER A 29 SHEET 4 A 7 VAL A 85 ASN A 88 1 O VAL A 85 N PHE A 7 SHEET 5 A 7 GLY A 134 ILE A 139 1 O ILE A 139 N ASN A 88 SHEET 6 A 7 ILE A 177 PRO A 184 1 O LEU A 182 N ASN A 138 SHEET 7 A 7 GLN A 248 ALA A 251 1 O ILE A 249 N CYS A 181 CISPEP 1 PRO A 147 GLY A 148 0 5.18 SITE 1 AC1 25 GLY A 10 SER A 12 GLN A 13 ILE A 15 SITE 2 AC1 25 ASN A 33 SER A 34 ARG A 35 ASN A 36 SITE 3 AC1 25 GLY A 61 ASP A 62 MET A 63 SER A 64 SITE 4 AC1 25 ASN A 89 ILE A 90 PRO A 91 LYS A 113 SITE 5 AC1 25 ILE A 139 VAL A 140 PRO A 184 GLY A 185 SITE 6 AC1 25 ILE A 187 THR A 189 ARG A 191 HOH A 298 SITE 7 AC1 25 HOH A 333 CRYST1 69.301 69.301 206.989 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014430 0.008331 0.000000 0.00000 SCALE2 0.000000 0.016662 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004831 0.00000