HEADER VIRAL PROTEIN/IMMUNE SYSTEM 14-OCT-11 3U7Y TITLE STRUCTURE OF NIH45-46 FAB IN COMPLEX WITH GP120 OF 93TH057 HIV COMPND MOL_ID: 1; COMPND 2 MOLECULE: NIH45-46 HEAVY CHAIN, IG GAMMA-1 CHAIN C REGION; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ENVELOPE GLYCOPROTEIN GP160; COMPND 7 CHAIN: G; COMPND 8 FRAGMENT: GP120 CORE (UNP RESIDUES 43-122, 201-303, 325-486); COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: NIH45-46 LIGHT CHAIN, IG KAPPA CHAIN C REGION; COMPND 13 CHAIN: L; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: IGHG1; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HEK 2936E; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 12 ORGANISM_TAXID: 11676; SOURCE 13 STRAIN: 93TH057; SOURCE 14 GENE: ENV, POL; SOURCE 15 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 19 ORGANISM_COMMON: HUMAN; SOURCE 20 ORGANISM_TAXID: 9606; SOURCE 21 GENE: IGKC; SOURCE 22 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 23 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 24 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 25 EXPRESSION_SYSTEM_CELL_LINE: HEK 2936E KEYWDS IG FOLD, GP120, ANTI HIV, GLYCOSYLATION, VIRAL PROTEIN-IMMUNE SYSTEM KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.DISKIN,P.J.BJORKMAN REVDAT 7 20-NOV-24 3U7Y 1 REMARK REVDAT 6 13-SEP-23 3U7Y 1 HETSYN LINK REVDAT 5 29-JUL-20 3U7Y 1 COMPND REMARK HETNAM LINK REVDAT 5 2 1 SITE ATOM REVDAT 4 25-DEC-19 3U7Y 1 REMARK DBREF SEQADV SEQRES REVDAT 4 2 1 LINK REVDAT 3 02-AUG-17 3U7Y 1 SOURCE REMARK REVDAT 2 21-DEC-11 3U7Y 1 JRNL REVDAT 1 16-NOV-11 3U7Y 0 JRNL AUTH R.DISKIN,J.F.SCHEID,P.M.MARCOVECCHIO,A.P.WEST,F.KLEIN,H.GAO, JRNL AUTH 2 P.N.GNANAPRAGASAM,A.ABADIR,M.S.SEAMAN,M.C.NUSSENZWEIG, JRNL AUTH 3 P.J.BJORKMAN JRNL TITL INCREASING THE POTENCY AND BREADTH OF AN HIV ANTIBODY BY JRNL TITL 2 USING STRUCTURE-BASED RATIONAL DESIGN. JRNL REF SCIENCE V. 334 1289 2011 JRNL REFN ISSN 0036-8075 JRNL PMID 22033520 JRNL DOI 10.1126/SCIENCE.1213782 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_805) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.05 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 38987 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.420 REMARK 3 FREE R VALUE TEST SET COUNT : 2112 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.0539 - 6.0288 0.98 2667 155 0.2056 0.2471 REMARK 3 2 6.0288 - 4.7885 0.99 2578 151 0.1628 0.1898 REMARK 3 3 4.7885 - 4.1841 0.98 2496 147 0.1405 0.1859 REMARK 3 4 4.1841 - 3.8020 0.99 2526 139 0.1740 0.2263 REMARK 3 5 3.8020 - 3.5297 0.99 2495 147 0.2049 0.2691 REMARK 3 6 3.5297 - 3.3218 0.97 2464 129 0.2266 0.2696 REMARK 3 7 3.3218 - 3.1555 0.99 2502 141 0.2439 0.2942 REMARK 3 8 3.1555 - 3.0182 0.99 2486 146 0.2432 0.3196 REMARK 3 9 3.0182 - 2.9021 0.99 2459 147 0.2465 0.3186 REMARK 3 10 2.9021 - 2.8019 0.99 2480 140 0.2708 0.3546 REMARK 3 11 2.8019 - 2.7144 0.98 2429 136 0.2961 0.3673 REMARK 3 12 2.7144 - 2.6368 0.98 2471 137 0.3190 0.3997 REMARK 3 13 2.6368 - 2.5674 0.98 2439 139 0.3329 0.3959 REMARK 3 14 2.5674 - 2.5048 0.98 2434 146 0.3782 0.4117 REMARK 3 15 2.5048 - 2.4478 0.78 1949 112 0.3631 0.4150 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.30 REMARK 3 B_SOL : 53.20 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.940 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 12.92620 REMARK 3 B22 (A**2) : 5.41970 REMARK 3 B33 (A**2) : -18.34600 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 6299 REMARK 3 ANGLE : 0.754 8549 REMARK 3 CHIRALITY : 0.051 962 REMARK 3 PLANARITY : 0.003 1091 REMARK 3 DIHEDRAL : 16.292 2273 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 18 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'H' AND (RESSEQ 2:115) REMARK 3 ORIGIN FOR THE GROUP (A): -4.8932 -26.2415 -28.1055 REMARK 3 T TENSOR REMARK 3 T11: 0.5595 T22: 0.3108 REMARK 3 T33: 0.2368 T12: -0.0448 REMARK 3 T13: 0.0337 T23: -0.0679 REMARK 3 L TENSOR REMARK 3 L11: 3.4748 L22: 3.2797 REMARK 3 L33: 5.9784 L12: 0.3594 REMARK 3 L13: -0.1115 L23: 0.1942 REMARK 3 S TENSOR REMARK 3 S11: -0.0095 S12: 0.0005 S13: -0.0313 REMARK 3 S21: 0.2006 S22: -0.2468 S23: 0.2097 REMARK 3 S31: -0.1425 S32: -0.4373 S33: 0.2625 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'H' AND (RESSEQ 116:218) REMARK 3 ORIGIN FOR THE GROUP (A): -25.2451 -45.3320 -1.0862 REMARK 3 T TENSOR REMARK 3 T11: 0.5048 T22: 0.5880 REMARK 3 T33: 0.5114 T12: -0.0435 REMARK 3 T13: 0.0311 T23: 0.1488 REMARK 3 L TENSOR REMARK 3 L11: 5.0818 L22: 5.7282 REMARK 3 L33: 6.9760 L12: 0.3862 REMARK 3 L13: -1.9447 L23: 1.7404 REMARK 3 S TENSOR REMARK 3 S11: -0.2340 S12: -0.0172 S13: 0.0060 REMARK 3 S21: -0.0562 S22: 0.2944 S23: 0.5291 REMARK 3 S31: 0.2443 S32: -1.0257 S33: -0.0538 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'G' AND (RESSEQ 44:73) REMARK 3 ORIGIN FOR THE GROUP (A): 10.1180 5.1187 -52.2695 REMARK 3 T TENSOR REMARK 3 T11: 0.6390 T22: 0.5754 REMARK 3 T33: 0.4503 T12: -0.0433 REMARK 3 T13: 0.0517 T23: 0.1145 REMARK 3 L TENSOR REMARK 3 L11: 3.7108 L22: 4.8852 REMARK 3 L33: 2.4028 L12: 1.4842 REMARK 3 L13: 1.2050 L23: 3.3599 REMARK 3 S TENSOR REMARK 3 S11: 0.0883 S12: 0.0064 S13: 0.1669 REMARK 3 S21: 0.3601 S22: -0.2036 S23: 0.0450 REMARK 3 S31: 0.8101 S32: 0.8353 S33: 0.1592 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'G' AND (RESSEQ 74:115) REMARK 3 ORIGIN FOR THE GROUP (A): 13.7452 1.9892 -43.3423 REMARK 3 T TENSOR REMARK 3 T11: 0.7061 T22: 0.4503 REMARK 3 T33: 0.3902 T12: -0.0194 REMARK 3 T13: 0.1110 T23: 0.0943 REMARK 3 L TENSOR REMARK 3 L11: 5.0072 L22: 5.7013 REMARK 3 L33: 6.0892 L12: 2.8492 REMARK 3 L13: 2.8536 L23: -0.0144 REMARK 3 S TENSOR REMARK 3 S11: 0.1667 S12: -0.1743 S13: 0.1895 REMARK 3 S21: 0.5909 S22: -0.3202 S23: -0.3264 REMARK 3 S31: -0.5774 S32: 0.4331 S33: 0.0627 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'G' AND (RESSEQ 116:258) REMARK 3 ORIGIN FOR THE GROUP (A): 10.4997 -3.6873 -47.7980 REMARK 3 T TENSOR REMARK 3 T11: 0.4501 T22: 0.3091 REMARK 3 T33: 0.3246 T12: 0.0876 REMARK 3 T13: 0.0147 T23: 0.1317 REMARK 3 L TENSOR REMARK 3 L11: 1.3095 L22: 4.2094 REMARK 3 L33: 4.4762 L12: 1.2940 REMARK 3 L13: -0.0776 L23: -0.7606 REMARK 3 S TENSOR REMARK 3 S11: -0.1789 S12: 0.1113 S13: 0.3565 REMARK 3 S21: 0.3151 S22: -0.2742 S23: -0.1283 REMARK 3 S31: -0.9407 S32: 0.6003 S33: 0.3057 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'G' AND (RESSEQ 259:353) REMARK 3 ORIGIN FOR THE GROUP (A): 19.6258 -20.4307 -46.1101 REMARK 3 T TENSOR REMARK 3 T11: 0.3351 T22: 0.6571 REMARK 3 T33: 0.5143 T12: 0.1216 REMARK 3 T13: 0.0880 T23: 0.2086 REMARK 3 L TENSOR REMARK 3 L11: 2.7818 L22: 4.4909 REMARK 3 L33: 5.0561 L12: -0.4389 REMARK 3 L13: -1.4129 L23: -0.6108 REMARK 3 S TENSOR REMARK 3 S11: 0.0997 S12: 0.3146 S13: -0.0480 REMARK 3 S21: -0.2935 S22: -0.3222 S23: -0.6834 REMARK 3 S31: 0.1445 S32: 0.6911 S33: 0.1806 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'G' AND (RESSEQ 354:392) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9223 -25.1703 -47.3345 REMARK 3 T TENSOR REMARK 3 T11: 0.6457 T22: 0.4723 REMARK 3 T33: 0.4479 T12: 0.1733 REMARK 3 T13: 0.0961 T23: 0.0642 REMARK 3 L TENSOR REMARK 3 L11: 6.3308 L22: 4.9286 REMARK 3 L33: 5.1410 L12: -1.5251 REMARK 3 L13: 3.5830 L23: -2.5327 REMARK 3 S TENSOR REMARK 3 S11: -0.1326 S12: -0.2975 S13: 0.2868 REMARK 3 S21: -0.2540 S22: -0.3921 S23: -0.4535 REMARK 3 S31: 0.4986 S32: 0.4834 S33: 0.5310 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'G' AND (RESSEQ 393:425) REMARK 3 ORIGIN FOR THE GROUP (A): 13.0410 -28.6950 -53.2400 REMARK 3 T TENSOR REMARK 3 T11: 0.9557 T22: 0.7948 REMARK 3 T33: 0.5330 T12: 0.3064 REMARK 3 T13: 0.2666 T23: 0.1046 REMARK 3 L TENSOR REMARK 3 L11: 0.8857 L22: 1.3279 REMARK 3 L33: 1.2580 L12: 1.0492 REMARK 3 L13: -0.3983 L23: -0.2439 REMARK 3 S TENSOR REMARK 3 S11: -0.2276 S12: 0.9236 S13: -0.8160 REMARK 3 S21: -0.5140 S22: -0.3374 S23: -0.5040 REMARK 3 S31: 0.9682 S32: 0.8169 S33: 0.2679 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'G' AND (RESSEQ 426:456) REMARK 3 ORIGIN FOR THE GROUP (A): 6.0724 -17.7040 -54.3821 REMARK 3 T TENSOR REMARK 3 T11: 0.5489 T22: 0.5834 REMARK 3 T33: 0.3819 T12: 0.0804 REMARK 3 T13: -0.0167 T23: 0.1207 REMARK 3 L TENSOR REMARK 3 L11: 2.8154 L22: 1.5400 REMARK 3 L33: 3.5295 L12: 0.8145 REMARK 3 L13: 0.3029 L23: 0.4798 REMARK 3 S TENSOR REMARK 3 S11: 0.0831 S12: 0.7775 S13: 0.5764 REMARK 3 S21: -0.7049 S22: -0.3041 S23: 0.0045 REMARK 3 S31: 0.3758 S32: -0.0627 S33: 0.2350 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'G' AND (RESSEQ 457:474) REMARK 3 ORIGIN FOR THE GROUP (A): 13.3528 -27.7233 -31.7243 REMARK 3 T TENSOR REMARK 3 T11: 0.6317 T22: 0.6942 REMARK 3 T33: 0.6774 T12: -0.0200 REMARK 3 T13: 0.0022 T23: 0.0921 REMARK 3 L TENSOR REMARK 3 L11: 3.6972 L22: 5.1728 REMARK 3 L33: 7.7077 L12: -4.2193 REMARK 3 L13: -5.2689 L23: 6.2788 REMARK 3 S TENSOR REMARK 3 S11: -0.4166 S12: -0.0895 S13: 0.9070 REMARK 3 S21: -0.1749 S22: -0.6445 S23: -1.1453 REMARK 3 S31: 1.7170 S32: 1.1305 S33: 0.7938 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'G' AND (RESSEQ 475:492) REMARK 3 ORIGIN FOR THE GROUP (A): 13.9789 -1.0370 -39.5534 REMARK 3 T TENSOR REMARK 3 T11: 0.7958 T22: 0.5240 REMARK 3 T33: 0.4049 T12: -0.0966 REMARK 3 T13: -0.0734 T23: 0.2035 REMARK 3 L TENSOR REMARK 3 L11: 4.5843 L22: 6.8049 REMARK 3 L33: 6.4977 L12: 3.4773 REMARK 3 L13: 2.9542 L23: 4.5592 REMARK 3 S TENSOR REMARK 3 S11: 0.5921 S12: -0.5905 S13: -0.4989 REMARK 3 S21: 1.1326 S22: -0.8184 S23: -0.9418 REMARK 3 S31: -0.2777 S32: -0.0615 S33: 0.3375 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'L' AND (RESSEQ 3:24) REMARK 3 ORIGIN FOR THE GROUP (A): 3.1918 -22.9971 -1.5575 REMARK 3 T TENSOR REMARK 3 T11: 1.2798 T22: 0.6174 REMARK 3 T33: 0.4149 T12: -0.2308 REMARK 3 T13: -0.0357 T23: 0.0646 REMARK 3 L TENSOR REMARK 3 L11: 8.9454 L22: 2.8338 REMARK 3 L33: 6.5190 L12: -1.6830 REMARK 3 L13: -5.7584 L23: 2.0458 REMARK 3 S TENSOR REMARK 3 S11: -0.3129 S12: -1.1254 S13: -0.2155 REMARK 3 S21: 0.8670 S22: 0.0091 S23: 0.0117 REMARK 3 S31: 0.1059 S32: 1.0350 S33: 0.1401 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'L' AND (RESSEQ 25:46) REMARK 3 ORIGIN FOR THE GROUP (A): -0.5950 -19.5912 -12.8393 REMARK 3 T TENSOR REMARK 3 T11: 0.9619 T22: 0.4398 REMARK 3 T33: 0.2830 T12: -0.2709 REMARK 3 T13: 0.1238 T23: -0.0817 REMARK 3 L TENSOR REMARK 3 L11: 5.6569 L22: 5.6325 REMARK 3 L33: 7.4135 L12: -2.3732 REMARK 3 L13: 5.0513 L23: 0.3254 REMARK 3 S TENSOR REMARK 3 S11: -0.3425 S12: -0.1502 S13: 0.9130 REMARK 3 S21: 0.3918 S22: 0.0427 S23: -0.3153 REMARK 3 S31: -0.5363 S32: -0.4109 S33: 0.1031 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'L' AND (RESSEQ 47:73) REMARK 3 ORIGIN FOR THE GROUP (A): 3.7669 -12.1999 -7.5302 REMARK 3 T TENSOR REMARK 3 T11: 1.2307 T22: 0.4780 REMARK 3 T33: 0.5676 T12: -0.2661 REMARK 3 T13: 0.0215 T23: -0.0955 REMARK 3 L TENSOR REMARK 3 L11: 5.3321 L22: 1.7292 REMARK 3 L33: 8.5651 L12: -2.4556 REMARK 3 L13: 0.1119 L23: 0.1799 REMARK 3 S TENSOR REMARK 3 S11: -0.3548 S12: -1.0336 S13: 0.7368 REMARK 3 S21: 1.2726 S22: 0.0074 S23: -0.2597 REMARK 3 S31: -0.7568 S32: 0.1248 S33: 0.1586 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'L' AND (RESSEQ 74:124) REMARK 3 ORIGIN FOR THE GROUP (A): -8.4619 -33.1915 -0.6015 REMARK 3 T TENSOR REMARK 3 T11: 0.9288 T22: 0.4803 REMARK 3 T33: 0.2209 T12: -0.1665 REMARK 3 T13: 0.1040 T23: -0.0545 REMARK 3 L TENSOR REMARK 3 L11: 0.7623 L22: 0.4912 REMARK 3 L33: 1.7641 L12: -0.4735 REMARK 3 L13: -0.3527 L23: -1.3446 REMARK 3 S TENSOR REMARK 3 S11: 0.2515 S12: -0.3167 S13: 0.0529 REMARK 3 S21: 0.6698 S22: -0.2092 S23: 0.1251 REMARK 3 S31: -0.7382 S32: 0.1103 S33: -0.2204 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'L' AND (RESSEQ 125:146) REMARK 3 ORIGIN FOR THE GROUP (A): -10.2605 -45.2175 8.7370 REMARK 3 T TENSOR REMARK 3 T11: 0.6075 T22: 0.6838 REMARK 3 T33: 0.4528 T12: -0.0888 REMARK 3 T13: 0.1119 T23: 0.1346 REMARK 3 L TENSOR REMARK 3 L11: 2.7178 L22: 7.4442 REMARK 3 L33: 8.5762 L12: -0.6150 REMARK 3 L13: -0.6014 L23: 6.2274 REMARK 3 S TENSOR REMARK 3 S11: 0.0356 S12: -0.6494 S13: -0.1707 REMARK 3 S21: -0.2852 S22: 0.0811 S23: -0.8287 REMARK 3 S31: -0.4436 S32: 0.5353 S33: -0.0162 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'L' AND (RESSEQ 147:184) REMARK 3 ORIGIN FOR THE GROUP (A): -11.3367 -48.2955 4.5487 REMARK 3 T TENSOR REMARK 3 T11: 0.6255 T22: 0.4984 REMARK 3 T33: 0.4387 T12: -0.0185 REMARK 3 T13: 0.0362 T23: 0.1318 REMARK 3 L TENSOR REMARK 3 L11: 2.7339 L22: 5.9887 REMARK 3 L33: 5.0405 L12: -0.5107 REMARK 3 L13: -1.9159 L23: 4.1703 REMARK 3 S TENSOR REMARK 3 S11: 0.1600 S12: -0.2717 S13: -0.1584 REMARK 3 S21: -0.4934 S22: -0.2370 S23: -0.4404 REMARK 3 S31: -0.2782 S32: 0.1546 S33: 0.0271 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'L' AND (RESSEQ 185:210) REMARK 3 ORIGIN FOR THE GROUP (A): -11.0494 -53.4699 14.5256 REMARK 3 T TENSOR REMARK 3 T11: 0.7288 T22: 0.8952 REMARK 3 T33: 0.6949 T12: 0.1122 REMARK 3 T13: 0.0775 T23: 0.2029 REMARK 3 L TENSOR REMARK 3 L11: 4.4218 L22: 9.5954 REMARK 3 L33: 9.5077 L12: 2.5295 REMARK 3 L13: 3.3421 L23: 5.2128 REMARK 3 S TENSOR REMARK 3 S11: 0.3021 S12: -1.1367 S13: -0.7796 REMARK 3 S21: 0.6253 S22: -0.2705 S23: -0.3075 REMARK 3 S31: 0.0164 S32: -0.7083 S33: 0.0996 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3U7Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-OCT-11. REMARK 100 THE DEPOSITION ID IS D_1000068419. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAY-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : LIQUID NITROGEN-COOLED DOUBLE REMARK 200 CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39062 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.448 REMARK 200 RESOLUTION RANGE LOW (A) : 37.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.51 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3U7W AND 3NGB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% ISOPROPANOL, 10% POLYETHYLENE REMARK 280 GLYCOL 10,000, 0.1 M SODIUM CITRATE PH 5.0, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.56500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 108.87000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.25000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 108.87000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.56500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.25000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, G, L, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS H 133 REMARK 465 SER H 134 REMARK 465 THR H 135 REMARK 465 SER H 136 REMARK 465 SER H 219 REMARK 465 CYS H 220 REMARK 465 ASP H 221 REMARK 465 GLY G 318 REMARK 465 GLY G 319 REMARK 465 SER G 320 REMARK 465 GLY G 321 REMARK 465 SER G 322 REMARK 465 GLY G 323 REMARK 465 GLY G 324 REMARK 465 GLY G 403 REMARK 465 ASN G 404 REMARK 465 GLU G 405 REMARK 465 THR G 406 REMARK 465 MET G 407 REMARK 465 LYS G 408 REMARK 465 GLY G 493 REMARK 465 SER G 494 REMARK 465 HIS G 495 REMARK 465 HIS G 496 REMARK 465 HIS G 497 REMARK 465 HIS G 498 REMARK 465 HIS G 499 REMARK 465 HIS G 500 REMARK 465 GLU L 1 REMARK 465 ILE L 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN G 88 C2 NAG G 506 1.75 REMARK 500 O HIS L 185 NH1 ARG L 207 2.04 REMARK 500 ND2 ASN G 295 C2 NAG G 502 2.10 REMARK 500 OE1 GLN L 99 NH1 ARG L 138 2.10 REMARK 500 ND2 ASN G 289 C2 NAG G 503 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA H 88 172.13 171.18 REMARK 500 CYS H 98 83.14 -152.68 REMARK 500 ASP H 148 62.13 64.65 REMARK 500 ASN H 159 46.07 37.74 REMARK 500 SER H 176 1.60 -65.40 REMARK 500 SER H 190 4.37 -68.64 REMARK 500 ASN G 88 70.66 8.80 REMARK 500 CYS G 205 67.45 -117.24 REMARK 500 GLN G 258 -59.17 64.50 REMARK 500 GLU G 268 -86.26 -119.41 REMARK 500 ASN G 276 97.83 -172.84 REMARK 500 LYS G 290 107.52 -160.78 REMARK 500 ASN G 461 -100.85 57.25 REMARK 500 THR G 463 146.78 75.91 REMARK 500 SER G 464 -24.44 99.19 REMARK 500 SER L 26 -7.57 -141.24 REMARK 500 SER L 28 155.94 71.13 REMARK 500 SER L 30 109.39 -11.02 REMARK 500 PRO L 38 107.62 -43.80 REMARK 500 TYR L 89 -119.82 57.08 REMARK 500 ASN L 134 76.66 46.37 REMARK 500 PRO L 137 -168.48 -74.60 REMARK 500 LYS L 186 -55.36 -121.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3U7W RELATED DB: PDB REMARK 900 NIH45-46 FAB UNBOUND DBREF 3U7Y H 1 117 PDB 3U7Y 3U7Y 1 117 DBREF 3U7Y H 118 221 UNP P01857 IGHG1_HUMAN 1 104 DBREF 3U7Y G 44 123 UNP Q0ED31 B1NCW8_9HIV1 43 122 DBREF 3U7Y G 199 301 UNP Q0ED31 B1NCW8_9HIV1 201 303 DBREF 3U7Y G 324 492 UNP Q0ED31 B1NCW8_9HIV1 325 486 DBREF 3U7Y L 1 104 PDB 3U7Y 3U7Y 1 104 DBREF 3U7Y L 105 210 UNP P01834 IGKC_HUMAN 1 106 SEQADV 3U7Y CYS G 65 UNP Q0ED31 VAL 64 ENGINEERED MUTATION SEQADV 3U7Y CYS G 115 UNP Q0ED31 SER 114 ENGINEERED MUTATION SEQADV 3U7Y GLY G 124 UNP Q0ED31 LINKER SEQADV 3U7Y GLY G 198 UNP Q0ED31 LINKER SEQADV 3U7Y GLY G 318 UNP Q0ED31 LINKER SEQADV 3U7Y GLY G 319 UNP Q0ED31 LINKER SEQADV 3U7Y SER G 320 UNP Q0ED31 LINKER SEQADV 3U7Y GLY G 321 UNP Q0ED31 LINKER SEQADV 3U7Y SER G 322 UNP Q0ED31 LINKER SEQADV 3U7Y GLY G 323 UNP Q0ED31 LINKER SEQADV 3U7Y GLY G 493 UNP Q0ED31 EXPRESSION TAG SEQADV 3U7Y SER G 494 UNP Q0ED31 EXPRESSION TAG SEQADV 3U7Y HIS G 495 UNP Q0ED31 EXPRESSION TAG SEQADV 3U7Y HIS G 496 UNP Q0ED31 EXPRESSION TAG SEQADV 3U7Y HIS G 497 UNP Q0ED31 EXPRESSION TAG SEQADV 3U7Y HIS G 498 UNP Q0ED31 EXPRESSION TAG SEQADV 3U7Y HIS G 499 UNP Q0ED31 EXPRESSION TAG SEQADV 3U7Y HIS G 500 UNP Q0ED31 EXPRESSION TAG SEQRES 1 H 229 PCA VAL ARG LEU SER GLN SER GLY GLY GLN MET LYS LYS SEQRES 2 H 229 PRO GLY GLU SER MET ARG LEU SER CYS ARG ALA SER GLY SEQRES 3 H 229 TYR GLU PHE LEU ASN CYS PRO ILE ASN TRP ILE ARG LEU SEQRES 4 H 229 ALA PRO GLY ARG ARG PRO GLU TRP MET GLY TRP LEU LYS SEQRES 5 H 229 PRO ARG GLY GLY ALA VAL ASN TYR ALA ARG LYS PHE GLN SEQRES 6 H 229 GLY ARG VAL THR MET THR ARG ASP VAL TYR SER ASP THR SEQRES 7 H 229 ALA PHE LEU GLU LEU ARG SER LEU THR SER ASP ASP THR SEQRES 8 H 229 ALA VAL TYR PHE CYS THR ARG GLY LYS TYR CYS THR ALA SEQRES 9 H 229 ARG ASP TYR TYR ASN TRP ASP PHE GLU HIS TRP GLY ARG SEQRES 10 H 229 GLY ALA PRO VAL THR VAL SER SER ALA SER THR LYS GLY SEQRES 11 H 229 PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SEQRES 12 H 229 SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP SEQRES 13 H 229 TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY SEQRES 14 H 229 ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU SEQRES 15 H 229 GLN SER SER GLY LEU TYR SER LEU SER SER VAL VAL THR SEQRES 16 H 229 VAL PRO SER SER SER LEU GLY THR GLN THR TYR ILE CYS SEQRES 17 H 229 ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS SEQRES 18 H 229 ARG VAL GLU PRO LYS SER CYS ASP SEQRES 1 G 361 VAL TRP LYS ASP ALA ASP THR THR LEU PHE CYS ALA SER SEQRES 2 G 361 ASP ALA LYS ALA HIS GLU THR GLU CYS HIS ASN VAL TRP SEQRES 3 G 361 ALA THR HIS ALA CYS VAL PRO THR ASP PRO ASN PRO GLN SEQRES 4 G 361 GLU ILE HIS LEU GLU ASN VAL THR GLU ASN PHE ASN MET SEQRES 5 G 361 TRP LYS ASN ASN MET VAL GLU GLN MET GLN GLU ASP VAL SEQRES 6 G 361 ILE SER LEU TRP ASP GLN CYS LEU GLN PRO CYS VAL LYS SEQRES 7 G 361 LEU THR GLY GLY SER VAL ILE LYS GLN ALA CYS PRO LYS SEQRES 8 G 361 ILE SER PHE ASP PRO ILE PRO ILE HIS TYR CYS THR PRO SEQRES 9 G 361 ALA GLY TYR VAL ILE LEU LYS CYS ASN ASP LYS ASN PHE SEQRES 10 G 361 ASN GLY THR GLY PRO CYS LYS ASN VAL SER SER VAL GLN SEQRES 11 G 361 CYS THR HIS GLY ILE LYS PRO VAL VAL SER THR GLN LEU SEQRES 12 G 361 LEU LEU ASN GLY SER LEU ALA GLU GLU GLU ILE ILE ILE SEQRES 13 G 361 ARG SER GLU ASN LEU THR ASN ASN ALA LYS THR ILE ILE SEQRES 14 G 361 VAL HIS LEU ASN LYS SER VAL GLU ILE ASN CYS THR ARG SEQRES 15 G 361 PRO SER ASN GLY GLY SER GLY SER GLY GLY ASP ILE ARG SEQRES 16 G 361 LYS ALA TYR CYS GLU ILE ASN GLY THR LYS TRP ASN LYS SEQRES 17 G 361 VAL LEU LYS GLN VAL THR GLU LYS LEU LYS GLU HIS PHE SEQRES 18 G 361 ASN ASN LYS THR ILE ILE PHE GLN PRO PRO SER GLY GLY SEQRES 19 G 361 ASP LEU GLU ILE THR MET HIS HIS PHE ASN CYS ARG GLY SEQRES 20 G 361 GLU PHE PHE TYR CYS ASN THR THR GLN LEU PHE ASN ASN SEQRES 21 G 361 THR CYS ILE GLY ASN GLU THR MET LYS GLY CYS ASN GLY SEQRES 22 G 361 THR ILE THR LEU PRO CYS LYS ILE LYS GLN ILE ILE ASN SEQRES 23 G 361 MET TRP GLN GLY THR GLY GLN ALA MET TYR ALA PRO PRO SEQRES 24 G 361 ILE ASP GLY LYS ILE ASN CYS VAL SER ASN ILE THR GLY SEQRES 25 G 361 ILE LEU LEU THR ARG ASP GLY GLY ALA ASN ASN THR SER SEQRES 26 G 361 ASN GLU THR PHE ARG PRO GLY GLY GLY ASN ILE LYS ASP SEQRES 27 G 361 ASN TRP ARG SER GLU LEU TYR LYS TYR LYS VAL VAL GLN SEQRES 28 G 361 ILE GLU GLY SER HIS HIS HIS HIS HIS HIS SEQRES 1 L 210 GLU ILE VAL LEU THR GLN SER PRO ALA THR LEU SER LEU SEQRES 2 L 210 SER PRO GLY GLU THR ALA ILE ILE SER CYS ARG THR SER SEQRES 3 L 210 GLN SER GLY SER LEU ALA TRP TYR GLN GLN ARG PRO GLY SEQRES 4 L 210 GLN ALA PRO ARG LEU VAL ILE TYR SER GLY SER THR ARG SEQRES 5 L 210 ALA ALA GLY ILE PRO ASP ARG PHE SER GLY SER ARG TRP SEQRES 6 L 210 GLY ALA ASP TYR ASN LEU SER ILE SER ASN LEU GLU SER SEQRES 7 L 210 GLY ASP PHE GLY VAL TYR TYR CYS GLN GLN TYR GLU PHE SEQRES 8 L 210 PHE GLY GLN GLY THR LYS VAL GLN VAL ASP ILE LYS ARG SEQRES 9 L 210 THR VAL ALA ALA PRO SER VAL PHE ILE PHE PRO PRO SER SEQRES 10 L 210 ASP GLU GLN LEU LYS SER GLY THR ALA SER VAL VAL CYS SEQRES 11 L 210 LEU LEU ASN ASN PHE TYR PRO ARG GLU ALA LYS VAL GLN SEQRES 12 L 210 TRP LYS VAL ASP ASN ALA LEU GLN SER GLY ASN SER GLN SEQRES 13 L 210 GLU SER VAL THR GLU GLN ASP SER LYS ASP SER THR TYR SEQRES 14 L 210 SER LEU SER SER THR LEU THR LEU SER LYS ALA ASP TYR SEQRES 15 L 210 GLU LYS HIS LYS VAL TYR ALA CYS GLU VAL THR HIS GLN SEQRES 16 L 210 GLY LEU SER SER PRO VAL THR LYS SER PHE ASN ARG GLY SEQRES 17 L 210 GLU CYS MODRES 3U7Y ASN G 295 ASN GLYCOSYLATION SITE MODRES 3U7Y ASN G 234 ASN GLYCOSYLATION SITE MODRES 3U7Y ASN L 70 ASN GLYCOSYLATION SITE MODRES 3U7Y ASN G 386 ASN GLYCOSYLATION SITE MODRES 3U7Y ASN G 88 ASN GLYCOSYLATION SITE MODRES 3U7Y ASN G 289 ASN GLYCOSYLATION SITE MODRES 3U7Y ASN G 262 ASN GLYCOSYLATION SITE MODRES 3U7Y PCA H 1 GLN PYROGLUTAMIC ACID HET PCA H 1 8 HET NAG A 1 14 HET NAG A 2 14 HET BMA A 3 11 HET MAN A 4 11 HET FLC H 222 13 HET NAG G 501 14 HET NAG G 502 14 HET NAG G 503 14 HET CL G 504 1 HET NAG G 505 14 HET NAG G 506 14 HET NAG L 211 14 HETNAM PCA PYROGLUTAMIC ACID HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM FLC CITRATE ANION HETNAM CL CHLORIDE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 1 PCA C5 H7 N O3 FORMUL 4 NAG 8(C8 H15 N O6) FORMUL 4 BMA C6 H12 O6 FORMUL 4 MAN C6 H12 O6 FORMUL 5 FLC C6 H5 O7 3- FORMUL 9 CL CL 1- FORMUL 13 HOH *67(H2 O) HELIX 1 1 GLU H 28 CYS H 32 5 5 HELIX 2 2 ARG H 61 GLN H 64 5 4 HELIX 3 3 THR H 83 THR H 87 5 5 HELIX 4 4 SER H 160 ALA H 162 5 3 HELIX 5 5 LYS H 205 ASN H 208 5 4 HELIX 6 6 GLU G 64 CYS G 74 1 11 HELIX 7 7 ASN G 98 GLN G 114 1 17 HELIX 8 8 GLY G 335 HIS G 352 1 18 HELIX 9 9 ASP G 368 MET G 373 1 6 HELIX 10 10 ASN G 392 ILE G 396 5 5 HELIX 11 11 ILE G 475 TYR G 484 1 10 HELIX 12 12 GLU L 77 PHE L 81 5 5 HELIX 13 13 SER L 117 LYS L 122 1 6 HELIX 14 14 LYS L 179 GLU L 183 1 5 SHEET 1 A 4 ARG H 3 GLN H 6 0 SHEET 2 A 4 MET H 18 SER H 25 -1 O ARG H 23 N SER H 5 SHEET 3 A 4 THR H 77 LEU H 82 -1 O ALA H 78 N CYS H 22 SHEET 4 A 4 VAL H 67 ASP H 72 -1 N THR H 70 O PHE H 79 SHEET 1 B 6 GLN H 10 LYS H 12 0 SHEET 2 B 6 ALA H 111 VAL H 115 1 O THR H 114 N LYS H 12 SHEET 3 B 6 ALA H 88 CYS H 98 -1 N ALA H 88 O VAL H 113 SHEET 4 B 6 ILE H 34 LEU H 39 -1 N ILE H 37 O PHE H 91 SHEET 5 B 6 GLU H 46 LYS H 52 -1 O MET H 48 N TRP H 36 SHEET 6 B 6 ALA H 56 TYR H 59 -1 O ALA H 56 N LYS H 52 SHEET 1 C 4 GLN H 10 LYS H 12 0 SHEET 2 C 4 ALA H 111 VAL H 115 1 O THR H 114 N LYS H 12 SHEET 3 C 4 ALA H 88 CYS H 98 -1 N ALA H 88 O VAL H 113 SHEET 4 C 4 TYR H 99D TRP H 107 -1 O TYR H 100 N TYR H 97 SHEET 1 D 4 SER H 124 LEU H 128 0 SHEET 2 D 4 THR H 139 TYR H 149 -1 O GLY H 143 N LEU H 128 SHEET 3 D 4 TYR H 180 PRO H 189 -1 O VAL H 188 N ALA H 140 SHEET 4 D 4 VAL H 167 THR H 169 -1 N HIS H 168 O VAL H 185 SHEET 1 E 4 SER H 124 LEU H 128 0 SHEET 2 E 4 THR H 139 TYR H 149 -1 O GLY H 143 N LEU H 128 SHEET 3 E 4 TYR H 180 PRO H 189 -1 O VAL H 188 N ALA H 140 SHEET 4 E 4 VAL H 173 LEU H 174 -1 N VAL H 173 O SER H 181 SHEET 1 F 3 THR H 155 TRP H 158 0 SHEET 2 F 3 TYR H 198 HIS H 204 -1 O ASN H 203 N THR H 155 SHEET 3 F 3 THR H 209 VAL H 215 -1 O LYS H 213 N CYS H 200 SHEET 1 G 5 TRP G 45 ASP G 47 0 SHEET 2 G 5 TYR G 486 ILE G 491 -1 O GLN G 490 N LYS G 46 SHEET 3 G 5 TYR G 223 CYS G 228 -1 N LEU G 226 O LYS G 487 SHEET 4 G 5 VAL G 242 VAL G 245 -1 O SER G 243 N LYS G 227 SHEET 5 G 5 ILE G 84 HIS G 85 -1 N ILE G 84 O SER G 244 SHEET 1 H 3 VAL G 75 PRO G 76 0 SHEET 2 H 3 PHE G 53 SER G 56 1 N SER G 56 O VAL G 75 SHEET 3 H 3 HIS G 216 CYS G 218 -1 O HIS G 216 N ALA G 55 SHEET 1 I 2 GLU G 91 ASN G 94 0 SHEET 2 I 2 THR G 236 CYS G 239 -1 O GLY G 237 N PHE G 93 SHEET 1 J 4 VAL G 200 LYS G 202 0 SHEET 2 J 4 VAL G 120 LEU G 122 -1 N LYS G 121 O ILE G 201 SHEET 3 J 4 GLN G 432 MET G 434 -1 O GLN G 432 N LEU G 122 SHEET 4 J 4 ILE G 423 ASN G 425 -1 N ILE G 424 O ALA G 433 SHEET 1 K 5 LEU G 259 LEU G 261 0 SHEET 2 K 5 ILE G 443 ARG G 456 -1 O GLY G 451 N LEU G 260 SHEET 3 K 5 ILE G 284 ARG G 298 -1 N VAL G 286 O ILE G 452 SHEET 4 K 5 ASN G 465 PRO G 470 0 SHEET 5 K 5 THR G 358 PHE G 361 1 N ILE G 360 O PHE G 468 SHEET 1 L 7 ILE G 271 SER G 274 0 SHEET 2 L 7 ILE G 284 ARG G 298 -1 O ILE G 285 N ARG G 273 SHEET 3 L 7 ILE G 443 ARG G 456 -1 O ILE G 452 N VAL G 286 SHEET 4 L 7 LYS G 328 ASN G 334 0 SHEET 5 L 7 THR G 413 LYS G 421 -1 O CYS G 418 N ALA G 329 SHEET 6 L 7 GLU G 381 CYS G 385 -1 N TYR G 384 O LYS G 419 SHEET 7 L 7 HIS G 374 CYS G 378 -1 N HIS G 374 O CYS G 385 SHEET 1 M 4 THR L 5 SER L 7 0 SHEET 2 M 4 ALA L 19 ARG L 24 -1 O SER L 22 N SER L 7 SHEET 3 M 4 ASP L 68 ILE L 73 -1 O ILE L 73 N ALA L 19 SHEET 4 M 4 PHE L 60 TRP L 65 -1 N SER L 61 O SER L 72 SHEET 1 N 6 THR L 10 LEU L 13 0 SHEET 2 N 6 THR L 96 VAL L 100 1 O LYS L 97 N LEU L 11 SHEET 3 N 6 GLY L 82 GLN L 88 -1 N GLY L 82 O VAL L 98 SHEET 4 N 6 LEU L 31 GLN L 36 -1 N GLN L 36 O VAL L 83 SHEET 5 N 6 ARG L 43 TYR L 47 -1 O VAL L 45 N TRP L 33 SHEET 6 N 6 THR L 51 ARG L 52 -1 O THR L 51 N TYR L 47 SHEET 1 O 4 THR L 10 LEU L 13 0 SHEET 2 O 4 THR L 96 VAL L 100 1 O LYS L 97 N LEU L 11 SHEET 3 O 4 GLY L 82 GLN L 88 -1 N GLY L 82 O VAL L 98 SHEET 4 O 4 PHE L 91 PHE L 92 -1 O PHE L 91 N GLN L 88 SHEET 1 P 4 SER L 110 PHE L 114 0 SHEET 2 P 4 THR L 125 PHE L 135 -1 O LEU L 131 N PHE L 112 SHEET 3 P 4 TYR L 169 SER L 178 -1 O LEU L 175 N VAL L 128 SHEET 4 P 4 SER L 155 VAL L 159 -1 N SER L 158 O SER L 172 SHEET 1 Q 4 ALA L 149 LEU L 150 0 SHEET 2 Q 4 LYS L 141 VAL L 146 -1 N VAL L 146 O ALA L 149 SHEET 3 Q 4 VAL L 187 THR L 193 -1 O ALA L 189 N LYS L 145 SHEET 4 Q 4 VAL L 201 ASN L 206 -1 O LYS L 203 N CYS L 190 SSBOND 1 CYS H 22 CYS H 92 1555 1555 2.05 SSBOND 2 CYS H 32 CYS H 98 1555 1555 2.05 SSBOND 3 CYS H 144 CYS H 200 1555 1555 2.04 SSBOND 4 CYS G 54 CYS G 74 1555 1555 2.03 SSBOND 5 CYS G 65 CYS G 115 1555 1555 2.04 SSBOND 6 CYS G 119 CYS G 205 1555 1555 2.03 SSBOND 7 CYS G 218 CYS G 247 1555 1555 2.04 SSBOND 8 CYS G 228 CYS G 239 1555 1555 2.04 SSBOND 9 CYS G 296 CYS G 331 1555 1555 2.03 SSBOND 10 CYS G 378 CYS G 445 1555 1555 2.03 SSBOND 11 CYS G 385 CYS G 418 1555 1555 2.03 SSBOND 12 CYS G 395 CYS G 410 1555 1555 2.04 SSBOND 13 CYS L 23 CYS L 86 1555 1555 2.04 SSBOND 14 CYS L 130 CYS L 190 1555 1555 2.03 LINK C PCA H 1 N VAL H 2 1555 1555 1.33 LINK ND2 ASN G 88 C1 NAG G 506 1555 1555 1.44 LINK ND2 ASN G 234 C1 NAG G 505 1555 1555 1.44 LINK ND2 ASN G 262 C1 NAG A 1 1555 1555 1.45 LINK ND2 ASN G 289 C1 NAG G 503 1555 1555 1.45 LINK ND2 ASN G 295 C1 NAG G 502 1555 1555 1.44 LINK ND2 ASN G 386 C1 NAG G 501 1555 1555 1.44 LINK ND2 ASN L 70 C1 NAG L 211 1555 1555 1.44 LINK O4 NAG A 1 C1 NAG A 2 1555 1555 1.44 LINK O4 NAG A 2 C1 BMA A 3 1555 1555 1.44 LINK O3 BMA A 3 C1 MAN A 4 1555 1555 1.45 CISPEP 1 PHE H 150 PRO H 151 0 -5.25 CISPEP 2 GLU H 152 PRO H 153 0 -1.92 CISPEP 3 THR G 463 SER G 464 0 5.11 CISPEP 4 GLY G 471 GLY G 472 0 -0.44 CISPEP 5 SER L 7 PRO L 8 0 -2.60 CISPEP 6 TYR L 136 PRO L 137 0 1.64 CRYST1 69.130 70.500 217.740 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014465 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014184 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004593 0.00000 HETATM 1 N PCA H 1 -15.402 -8.970 -26.460 1.00 83.76 N HETATM 2 CA PCA H 1 -14.536 -9.560 -25.446 1.00 79.07 C HETATM 3 CB PCA H 1 -15.308 -9.810 -24.154 1.00 82.89 C HETATM 4 CG PCA H 1 -16.778 -9.763 -24.522 1.00 85.22 C HETATM 5 CD PCA H 1 -16.742 -9.120 -25.882 1.00 88.27 C HETATM 6 OE PCA H 1 -17.775 -8.744 -26.437 1.00 92.58 O HETATM 7 C PCA H 1 -13.978 -10.893 -25.921 1.00 69.08 C HETATM 8 O PCA H 1 -14.678 -11.680 -26.563 1.00 73.09 O