HEADER TRANSFERASE 21-OCT-11 3UA6 TITLE CRYSTAL STRUCTURE OF THE HUMAN FYN SH3 DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE FYN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: SH3 DOMAIN (UNP RESIDUES 81-143); COMPND 5 SYNONYM: PROTO-ONCOGENE SYN, PROTO-ONCOGENE C-FYN, SRC-LIKE KINASE, COMPND 6 SLK, P59-FYN; COMPND 7 EC: 2.7.10.2; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FYN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET3D KEYWDS BETA BARREL, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.CAMARA-ARTIGAS,J.M.MARTIN-GARCIA REVDAT 3 13-SEP-23 3UA6 1 REMARK SEQADV LINK REVDAT 2 23-JAN-13 3UA6 1 JRNL REVDAT 1 25-JUL-12 3UA6 0 JRNL AUTH J.M.MARTIN-GARCIA,I.LUQUE,J.RUIZ-SANZ,A.CAMARA-ARTIGAS JRNL TITL THE PROMISCUOUS BINDING OF THE FYN SH3 DOMAIN TO A PEPTIDE JRNL TITL 2 FROM THE NS5A PROTEIN. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 68 1030 2012 JRNL REFN ISSN 0907-4449 JRNL PMID 22868769 JRNL DOI 10.1107/S0907444912019798 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.66 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 3 NUMBER OF REFLECTIONS : 11447 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 544 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 454 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 54.06 REMARK 3 BIN R VALUE (WORKING SET) : 0.1880 REMARK 3 BIN FREE R VALUE SET COUNT : 25 REMARK 3 BIN FREE R VALUE : 0.2470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 943 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 75 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.92 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.05000 REMARK 3 B22 (A**2) : 0.53000 REMARK 3 B33 (A**2) : -0.50000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.06000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.137 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.148 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.086 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.052 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1018 ; 0.020 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1377 ; 1.978 ; 1.947 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 121 ; 7.304 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 54 ;39.365 ;24.444 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 151 ;13.380 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;11.186 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 142 ; 0.139 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 795 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 603 ; 2.006 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 953 ; 2.933 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 415 ; 4.354 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 422 ; 6.731 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 2 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 85 A 113 2 REMARK 3 1 B 85 B 113 2 REMARK 3 2 A 118 A 140 4 REMARK 3 2 B 118 B 140 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 114 ; 0.500 ; 0.050 REMARK 3 MEDIUM POSITIONAL 1 A (A): 293 ; 0.760 ; 0.500 REMARK 3 TIGHT THERMAL 1 A (A**2): 114 ; 1.790 ; 0.500 REMARK 3 MEDIUM THERMAL 1 A (A**2): 293 ; 2.190 ; 2.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 85 A 141 REMARK 3 ORIGIN FOR THE GROUP (A): -7.6560 -0.4100 -10.4940 REMARK 3 T TENSOR REMARK 3 T11: 0.0148 T22: 0.0245 REMARK 3 T33: 0.0284 T12: 0.0120 REMARK 3 T13: -0.0027 T23: -0.0156 REMARK 3 L TENSOR REMARK 3 L11: 2.8237 L22: 1.5698 REMARK 3 L33: 3.7608 L12: -0.6960 REMARK 3 L13: 0.2198 L23: -0.4340 REMARK 3 S TENSOR REMARK 3 S11: -0.0025 S12: 0.0857 S13: 0.0476 REMARK 3 S21: 0.0151 S22: 0.0271 S23: -0.0215 REMARK 3 S31: 0.0178 S32: 0.1312 S33: -0.0247 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 83 B 142 REMARK 3 ORIGIN FOR THE GROUP (A): -22.8320 15.5020 -9.7950 REMARK 3 T TENSOR REMARK 3 T11: 0.0451 T22: 0.0207 REMARK 3 T33: 0.0285 T12: 0.0169 REMARK 3 T13: -0.0076 T23: 0.0047 REMARK 3 L TENSOR REMARK 3 L11: 2.2479 L22: 2.0904 REMARK 3 L33: 3.3265 L12: -1.4578 REMARK 3 L13: -0.1825 L23: 0.5776 REMARK 3 S TENSOR REMARK 3 S11: -0.0664 S12: -0.0052 S13: 0.0465 REMARK 3 S21: -0.0101 S22: -0.0552 S23: 0.1065 REMARK 3 S31: -0.2014 S32: 0.0214 S33: 0.1217 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 3UA6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-OCT-11. REMARK 100 THE DEPOSITION ID IS D_1000068499. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-NOV-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER MICROFOCUS (MONTEL REMARK 200 OPTICS) REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SAINT REMARK 200 DATA SCALING SOFTWARE : SAINT, SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11459 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 41.998 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 200 DATA REDUNDANCY : 2.490 REMARK 200 R MERGE (I) : 0.02740 REMARK 200 R SYM (I) : 0.02740 REMARK 200 FOR THE DATA SET : 21.6600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 72.4 REMARK 200 DATA REDUNDANCY IN SHELL : 0.87 REMARK 200 R MERGE FOR SHELL (I) : 0.15110 REMARK 200 R SYM FOR SHELL (I) : 0.15110 REMARK 200 FOR SHELL : 3.780 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1SHF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5.5 M SODIUM FORMATE, 0.1 M MES, PH REMARK 280 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 36.14650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.53700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 36.14650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 23.53700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 80 REMARK 465 GLY A 81 REMARK 465 THR A 82 REMARK 465 GLY A 83 REMARK 465 VAL A 84 REMARK 465 ASP A 142 REMARK 465 SER A 143 REMARK 465 MET B 80 REMARK 465 GLY B 81 REMARK 465 THR B 82 REMARK 465 SER B 143 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER B 114 65.92 -110.26 REMARK 500 SER B 115 -96.56 -107.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 146 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 14 O REMARK 620 2 HOH A 17 O 94.0 REMARK 620 3 SER A 135 O 83.0 132.5 REMARK 620 4 VAL A 138 O 168.4 91.1 85.9 REMARK 620 5 HOH B 41 O 102.4 91.8 135.3 87.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 147 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 21 O REMARK 620 2 HOH A 40 O 79.3 REMARK 620 3 THR A 97 O 151.9 127.3 REMARK 620 4 ASP A 100 O 98.9 90.4 90.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 2 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 5 O REMARK 620 2 HOH B 44 O 104.1 REMARK 620 3 SER B 135 O 114.6 137.5 REMARK 620 4 VAL B 138 O 75.7 82.4 90.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 144 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 145 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT B 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 146 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 147 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 148 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 149 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1SHF RELATED DB: PDB REMARK 900 RELATED ID: 3UA7 RELATED DB: PDB DBREF 3UA6 A 81 143 UNP P06241 FYN_HUMAN 81 143 DBREF 3UA6 B 81 143 UNP P06241 FYN_HUMAN 81 143 SEQADV 3UA6 MET A 80 UNP P06241 INITIATING METHIONINE SEQADV 3UA6 MET B 80 UNP P06241 INITIATING METHIONINE SEQRES 1 A 64 MET GLY THR GLY VAL THR LEU PHE VAL ALA LEU TYR ASP SEQRES 2 A 64 TYR GLU ALA ARG THR GLU ASP ASP LEU SER PHE HIS LYS SEQRES 3 A 64 GLY GLU LYS PHE GLN ILE LEU ASN SER SER GLU GLY ASP SEQRES 4 A 64 TRP TRP GLU ALA ARG SER LEU THR THR GLY GLU THR GLY SEQRES 5 A 64 TYR ILE PRO SER ASN TYR VAL ALA PRO VAL ASP SER SEQRES 1 B 64 MET GLY THR GLY VAL THR LEU PHE VAL ALA LEU TYR ASP SEQRES 2 B 64 TYR GLU ALA ARG THR GLU ASP ASP LEU SER PHE HIS LYS SEQRES 3 B 64 GLY GLU LYS PHE GLN ILE LEU ASN SER SER GLU GLY ASP SEQRES 4 B 64 TRP TRP GLU ALA ARG SER LEU THR THR GLY GLU THR GLY SEQRES 5 B 64 TYR ILE PRO SER ASN TYR VAL ALA PRO VAL ASP SER HET GOL A 1 6 HET GOL A 2 6 HET FMT A 144 3 HET FMT A 145 3 HET FMT A 3 3 HET NA A 146 1 HET NA A 147 1 HET FMT A 148 3 HET FMT A 149 3 HET FMT B 4 3 HET NA B 2 1 HETNAM GOL GLYCEROL HETNAM FMT FORMIC ACID HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 FMT 6(C H2 O2) FORMUL 8 NA 3(NA 1+) FORMUL 14 HOH *75(H2 O) SHEET 1 A 5 THR A 130 PRO A 134 0 SHEET 2 A 5 TRP A 119 SER A 124 -1 N TRP A 120 O ILE A 133 SHEET 3 A 5 LYS A 108 ASN A 113 -1 N LEU A 112 O GLU A 121 SHEET 4 A 5 LEU A 86 ALA A 89 -1 N PHE A 87 O PHE A 109 SHEET 5 A 5 VAL A 138 PRO A 140 -1 O ALA A 139 N VAL A 88 SHEET 1 B 5 THR B 130 PRO B 134 0 SHEET 2 B 5 TRP B 119 SER B 124 -1 N ALA B 122 O GLY B 131 SHEET 3 B 5 LYS B 108 GLN B 110 -1 N GLN B 110 O ARG B 123 SHEET 4 B 5 LEU B 86 ALA B 89 -1 N PHE B 87 O PHE B 109 SHEET 5 B 5 VAL B 138 PRO B 140 -1 O ALA B 139 N VAL B 88 LINK O HOH A 14 NA NA A 146 1555 1555 2.32 LINK O HOH A 17 NA NA A 146 1555 1555 2.36 LINK O HOH A 21 NA NA A 147 1555 1555 2.66 LINK O HOH A 40 NA NA A 147 1555 1555 2.33 LINK O THR A 97 NA NA A 147 1555 1555 2.62 LINK O ASP A 100 NA NA A 147 1555 1555 2.16 LINK O SER A 135 NA NA A 146 1555 1555 2.75 LINK O VAL A 138 NA NA A 146 1555 1555 2.14 LINK NA NA A 146 O HOH B 41 1555 1555 2.44 LINK NA NA B 2 O HOH B 5 1555 1555 2.46 LINK NA NA B 2 O HOH B 44 1555 1555 2.20 LINK NA NA B 2 O SER B 135 1555 1555 2.29 LINK NA NA B 2 O VAL B 138 1555 1555 2.52 CISPEP 1 GLU B 116 GLY B 117 0 -1.62 SITE 1 AC1 4 HOH A 43 ASN A 136 FMT A 148 GLY B 83 SITE 1 AC2 7 GLU A 107 LYS A 108 THR A 126 ASP B 118 SITE 2 AC2 7 PRO B 134 SER B 135 ASN B 136 SITE 1 AC3 3 TYR A 91 ASP A 92 HIS B 104 SITE 1 AC4 3 FMT A 3 VAL A 88 PRO A 140 SITE 1 AC5 7 HOH A 8 ALA A 89 LEU A 90 LYS A 105 SITE 2 AC5 7 FMT A 145 HIS B 104 LYS B 105 SITE 1 AC6 6 HOH A 49 ASP B 92 TYR B 93 GLU B 94 SITE 2 AC6 6 ARG B 96 TYR B 137 SITE 1 AC7 5 HOH A 14 HOH A 17 SER A 135 VAL A 138 SITE 2 AC7 5 HOH B 41 SITE 1 AC8 4 HOH B 5 HOH B 44 SER B 135 VAL B 138 SITE 1 AC9 5 HOH A 21 HOH A 40 ALA A 95 THR A 97 SITE 2 AC9 5 ASP A 100 SITE 1 BC1 4 GOL A 1 ARG A 96 THR B 85 GLN B 110 SITE 1 BC2 4 LYS A 105 GLY A 106 HOH B 5 ASN B 136 CRYST1 72.293 47.074 42.467 90.00 98.52 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013833 0.000000 0.002072 0.00000 SCALE2 0.000000 0.021243 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023810 0.00000