HEADER TRANSFERASE 24-OCT-11 3UBL TITLE CRYSTAL STRUCTURE OF GLUTATHIONE TRANSFERASE (TARGET EFI-501770) FROM TITLE 2 LEPTOSPIRA INTERROGANS WITH GSH BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE TRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEPTOSPIRA INTERROGANS SEROVAR LAI; SOURCE 3 ORGANISM_TAXID: 189518; SOURCE 4 STRAIN: 56601; SOURCE 5 GENE: GST, LA_2623; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS TRANSFERASE, GSH BINDING SITE, STRUCTURAL GENOMICS EXPDTA X-RAY DIFFRACTION AUTHOR Y.PATSKOVSKY,R.TORO,R.BHOSLE,W.D.ZENCHECK,B.HILLERICH,R.D.SEIDEL, AUTHOR 2 E.WASHINGTON,A.SCOTT GLENN,S.CHOWDHURY,B.EVANS,J.HAMMONDS,H.J.IMKER, AUTHOR 3 R.N.ARMSTRONG,J.A.GERLT,S.C.ALMO,ENZYME FUNCTION INITIATIVE (EFI) REVDAT 5 13-SEP-23 3UBL 1 REMARK SEQADV REVDAT 4 24-JAN-18 3UBL 1 AUTHOR REVDAT 3 29-FEB-12 3UBL 1 AUTHOR JRNL REVDAT 2 21-DEC-11 3UBL 1 HETATM HETNAM REVDAT 1 09-NOV-11 3UBL 0 JRNL AUTH Y.PATSKOVSKY,R.TORO,R.BHOSLE,W.D.ZENCHECK,B.HILLERICH, JRNL AUTH 2 R.D.SEIDEL,E.WASHINGTON,A.SCOTT GLENN,S.CHOWDHURY,B.EVANS, JRNL AUTH 3 J.HAMMONDS,H.J.IMKER,R.N.ARMSTRONG,J.A.GERLT,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF GLUTATHIONE S-TRANSFERASE FROM JRNL TITL 2 LEPTOSPIRA INTERROGANS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 39582 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1272 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2384 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.80 REMARK 3 BIN R VALUE (WORKING SET) : 0.2870 REMARK 3 BIN FREE R VALUE SET COUNT : 69 REMARK 3 BIN FREE R VALUE : 0.3010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3349 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 88 REMARK 3 SOLVENT ATOMS : 142 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.32 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.87000 REMARK 3 B22 (A**2) : 1.87000 REMARK 3 B33 (A**2) : -3.74000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.145 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.113 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.067 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3555 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4803 ; 1.017 ; 2.017 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 421 ; 4.544 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 144 ;31.334 ;24.167 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 631 ;14.310 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;14.943 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 538 ; 0.068 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2600 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2106 ; 3.250 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3429 ; 4.647 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1449 ; 6.598 ; 4.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1371 ; 9.525 ; 6.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3UBL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-OCT-11. REMARK 100 THE DEPOSITION ID IS D_1000068549. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-OCT-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.075 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45757 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.940 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 200 DATA REDUNDANCY : 15.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08900 REMARK 200 FOR THE DATA SET : 7.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.94 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 60.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.60 REMARK 200 R MERGE FOR SHELL (I) : 0.92000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MR REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3UBK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS, PH 5.5, 2M AMMONIUM REMARK 280 SULFATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+1/4 REMARK 290 8555 -Y,-X,-Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 87.85050 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 131.77575 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 43.92525 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 87.85050 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 43.92525 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 131.77575 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -105.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 320 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -1 REMARK 465 PRO A 111 REMARK 465 ALA A 112 REMARK 465 LYS A 214 REMARK 465 THR A 215 REMARK 465 LYS A 216 REMARK 465 ILE A 217 REMARK 465 GLY A 218 REMARK 465 ALA A 219 REMARK 465 GLU A 220 REMARK 465 ASN A 221 REMARK 465 LEU A 222 REMARK 465 TYR A 223 REMARK 465 PHE A 224 REMARK 465 GLN A 225 REMARK 465 SER A 226 REMARK 465 HIS A 227 REMARK 465 HIS A 228 REMARK 465 HIS A 229 REMARK 465 HIS A 230 REMARK 465 HIS A 231 REMARK 465 HIS A 232 REMARK 465 TRP A 233 REMARK 465 SER A 234 REMARK 465 HIS A 235 REMARK 465 PRO A 236 REMARK 465 GLN A 237 REMARK 465 PHE A 238 REMARK 465 GLU A 239 REMARK 465 LYS A 240 REMARK 465 MET B -1 REMARK 465 LEU B 110 REMARK 465 PRO B 111 REMARK 465 ALA B 112 REMARK 465 ALA B 113 REMARK 465 LYS B 114 REMARK 465 VAL B 115 REMARK 465 SER B 116 REMARK 465 LYS B 214 REMARK 465 THR B 215 REMARK 465 LYS B 216 REMARK 465 ILE B 217 REMARK 465 GLY B 218 REMARK 465 ALA B 219 REMARK 465 GLU B 220 REMARK 465 ASN B 221 REMARK 465 LEU B 222 REMARK 465 TYR B 223 REMARK 465 PHE B 224 REMARK 465 GLN B 225 REMARK 465 SER B 226 REMARK 465 HIS B 227 REMARK 465 HIS B 228 REMARK 465 HIS B 229 REMARK 465 HIS B 230 REMARK 465 HIS B 231 REMARK 465 HIS B 232 REMARK 465 TRP B 233 REMARK 465 SER B 234 REMARK 465 HIS B 235 REMARK 465 PRO B 236 REMARK 465 GLN B 237 REMARK 465 PHE B 238 REMARK 465 GLU B 239 REMARK 465 LYS B 240 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 55 CG OD1 OD2 REMARK 470 LYS A 114 CG CD CE NZ REMARK 470 LEU B 210 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 35 143.03 -179.10 REMARK 500 GLU A 61 121.11 97.32 REMARK 500 ILE A 108 -72.07 -96.01 REMARK 500 ASN A 173 -10.03 77.48 REMARK 500 GLU B 61 113.16 72.49 REMARK 500 PHE B 73 73.49 -119.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH A 241 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 242 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 243 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 244 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 245 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 246 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 247 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 248 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH B 241 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 242 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 243 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 244 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3UBK RELATED DB: PDB REMARK 900 RELATED ID: EFI-501770 RELATED DB: TARGETTRACK DBREF 3UBL A 1 218 UNP Q8F2Y8 Q8F2Y8_LEPIN 1 218 DBREF 3UBL B 1 218 UNP Q8F2Y8 Q8F2Y8_LEPIN 1 218 SEQADV 3UBL MET A -1 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL VAL A 0 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL ALA A 219 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL GLU A 220 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL ASN A 221 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL LEU A 222 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL TYR A 223 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL PHE A 224 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL GLN A 225 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL SER A 226 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL HIS A 227 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL HIS A 228 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL HIS A 229 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL HIS A 230 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL HIS A 231 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL HIS A 232 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL TRP A 233 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL SER A 234 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL HIS A 235 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL PRO A 236 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL GLN A 237 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL PHE A 238 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL GLU A 239 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL LYS A 240 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL MET B -1 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL VAL B 0 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL ALA B 219 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL GLU B 220 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL ASN B 221 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL LEU B 222 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL TYR B 223 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL PHE B 224 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL GLN B 225 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL SER B 226 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL HIS B 227 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL HIS B 228 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL HIS B 229 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL HIS B 230 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL HIS B 231 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL HIS B 232 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL TRP B 233 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL SER B 234 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL HIS B 235 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL PRO B 236 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL GLN B 237 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL PHE B 238 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL GLU B 239 UNP Q8F2Y8 EXPRESSION TAG SEQADV 3UBL LYS B 240 UNP Q8F2Y8 EXPRESSION TAG SEQRES 1 A 242 MET VAL MET ILE LYS LEU HIS GLY ALA SER ILE SER ASN SEQRES 2 A 242 TYR VAL ASN LYS VAL LYS LEU GLY ILE LEU GLU LYS GLY SEQRES 3 A 242 LEU GLU TYR GLU GLN ILE ARG ILE ALA PRO SER GLN GLU SEQRES 4 A 242 GLU ASP PHE LEU LYS ILE SER PRO MET GLY LYS ILE PRO SEQRES 5 A 242 VAL LEU GLU MET ASP GLY LYS PHE ILE PHE GLU SER GLY SEQRES 6 A 242 ALA ILE LEU GLU PHE LEU ASP THR ILE PHE PRO GLN THR SEQRES 7 A 242 PRO LYS LEU ILE PRO GLU ASP PRO TRP GLU ALA ALA ARG SEQRES 8 A 242 VAL ARG GLU ILE SER THR ILE ILE GLU THR TYR LEU ASP SEQRES 9 A 242 ILE PRO ALA ARG ARG ILE TYR LEU PRO ALA ALA LYS VAL SEQRES 10 A 242 SER PRO GLU ILE VAL GLU GLU VAL HIS SER THR LEU VAL SEQRES 11 A 242 LYS GLY ILE LYS ALA LEU GLN ARG VAL VAL ARG PHE SER SEQRES 12 A 242 PRO TYR ILE ALA GLY ASN VAL PHE THR LEU ALA ASP CYS SEQRES 13 A 242 SER GLY PHE ALA HIS LEU SER VAL LEU ASP GLU GLU LEU SEQRES 14 A 242 ARG PRO PHE TYR PRO ASN ASN HIS PRO LEU ASP LEU LEU SEQRES 15 A 242 ASN GLY TRP LYS GLU TYR PHE VAL PHE MET LYS THR LYS SEQRES 16 A 242 ALA GLY PRO ALA LEU VAL GLU LYS ASP LYS GLN ILE LEU SEQRES 17 A 242 LYS LYS ILE LEU ALA ARG ALA LYS THR LYS ILE GLY ALA SEQRES 18 A 242 GLU ASN LEU TYR PHE GLN SER HIS HIS HIS HIS HIS HIS SEQRES 19 A 242 TRP SER HIS PRO GLN PHE GLU LYS SEQRES 1 B 242 MET VAL MET ILE LYS LEU HIS GLY ALA SER ILE SER ASN SEQRES 2 B 242 TYR VAL ASN LYS VAL LYS LEU GLY ILE LEU GLU LYS GLY SEQRES 3 B 242 LEU GLU TYR GLU GLN ILE ARG ILE ALA PRO SER GLN GLU SEQRES 4 B 242 GLU ASP PHE LEU LYS ILE SER PRO MET GLY LYS ILE PRO SEQRES 5 B 242 VAL LEU GLU MET ASP GLY LYS PHE ILE PHE GLU SER GLY SEQRES 6 B 242 ALA ILE LEU GLU PHE LEU ASP THR ILE PHE PRO GLN THR SEQRES 7 B 242 PRO LYS LEU ILE PRO GLU ASP PRO TRP GLU ALA ALA ARG SEQRES 8 B 242 VAL ARG GLU ILE SER THR ILE ILE GLU THR TYR LEU ASP SEQRES 9 B 242 ILE PRO ALA ARG ARG ILE TYR LEU PRO ALA ALA LYS VAL SEQRES 10 B 242 SER PRO GLU ILE VAL GLU GLU VAL HIS SER THR LEU VAL SEQRES 11 B 242 LYS GLY ILE LYS ALA LEU GLN ARG VAL VAL ARG PHE SER SEQRES 12 B 242 PRO TYR ILE ALA GLY ASN VAL PHE THR LEU ALA ASP CYS SEQRES 13 B 242 SER GLY PHE ALA HIS LEU SER VAL LEU ASP GLU GLU LEU SEQRES 14 B 242 ARG PRO PHE TYR PRO ASN ASN HIS PRO LEU ASP LEU LEU SEQRES 15 B 242 ASN GLY TRP LYS GLU TYR PHE VAL PHE MET LYS THR LYS SEQRES 16 B 242 ALA GLY PRO ALA LEU VAL GLU LYS ASP LYS GLN ILE LEU SEQRES 17 B 242 LYS LYS ILE LEU ALA ARG ALA LYS THR LYS ILE GLY ALA SEQRES 18 B 242 GLU ASN LEU TYR PHE GLN SER HIS HIS HIS HIS HIS HIS SEQRES 19 B 242 TRP SER HIS PRO GLN PHE GLU LYS HET GSH A 241 40 HET SO4 A 242 5 HET SO4 A 243 5 HET SO4 A 244 5 HET GOL A 245 6 HET CL A 246 1 HET GOL A 247 6 HET GOL A 248 6 HET UNX A 249 1 HET GSH B 241 40 HET SO4 B 242 5 HET GOL B 243 6 HET CL B 244 1 HET UNX B 245 1 HETNAM GSH GLUTATHIONE HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETNAM UNX UNKNOWN ATOM OR ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GSH 2(C10 H17 N3 O6 S) FORMUL 4 SO4 4(O4 S 2-) FORMUL 7 GOL 4(C3 H8 O3) FORMUL 8 CL 2(CL 1-) FORMUL 11 UNX 2(X) FORMUL 17 HOH *142(H2 O) HELIX 1 1 SER A 10 GLY A 24 1 15 HELIX 2 2 GLU A 37 LYS A 42 1 6 HELIX 3 3 GLU A 61 PHE A 73 1 13 HELIX 4 4 ASP A 83 LEU A 101 1 19 HELIX 5 5 LEU A 101 LEU A 110 1 10 HELIX 6 6 SER A 116 ARG A 136 1 21 HELIX 7 7 THR A 150 TYR A 171 1 22 HELIX 8 8 HIS A 175 LEU A 180 5 6 HELIX 9 9 GLY A 182 THR A 192 1 11 HELIX 10 10 LYS A 193 ALA A 211 1 19 HELIX 11 11 SER B 10 LYS B 23 1 14 HELIX 12 12 GLU B 37 LYS B 42 1 6 HELIX 13 13 GLU B 61 PHE B 73 1 13 HELIX 14 14 ASP B 83 TYR B 100 1 18 HELIX 15 15 LEU B 101 ARG B 106 1 6 HELIX 16 16 ARG B 107 TYR B 109 5 3 HELIX 17 17 ILE B 119 GLN B 135 1 17 HELIX 18 18 THR B 150 ARG B 168 1 19 HELIX 19 19 HIS B 175 LEU B 180 5 6 HELIX 20 20 GLY B 182 THR B 192 1 11 HELIX 21 21 LYS B 193 LEU B 210 1 18 SHEET 1 A 4 TYR A 27 ILE A 30 0 SHEET 2 A 4 ILE A 2 HIS A 5 1 N LEU A 4 O ILE A 30 SHEET 3 A 4 VAL A 51 MET A 54 -1 O VAL A 51 N HIS A 5 SHEET 4 A 4 LYS A 57 PHE A 60 -1 O ILE A 59 N LEU A 52 SHEET 1 B 4 TYR B 27 ILE B 30 0 SHEET 2 B 4 ILE B 2 HIS B 5 1 N LEU B 4 O GLU B 28 SHEET 3 B 4 VAL B 51 MET B 54 -1 O VAL B 51 N HIS B 5 SHEET 4 B 4 LYS B 57 PHE B 60 -1 O ILE B 59 N LEU B 52 CISPEP 1 ILE A 49 PRO A 50 0 6.07 CISPEP 2 THR A 76 PRO A 77 0 -1.65 CISPEP 3 THR A 76 PRO A 77 0 -2.66 CISPEP 4 SER A 141 PRO A 142 0 0.48 CISPEP 5 ILE B 49 PRO B 50 0 5.34 CISPEP 6 THR B 76 PRO B 77 0 2.10 CISPEP 7 SER B 141 PRO B 142 0 1.33 SITE 1 AC1 15 SER A 10 ASN A 11 TYR A 12 PRO A 34 SITE 2 AC1 15 LYS A 48 ILE A 49 PRO A 50 GLU A 61 SITE 3 AC1 15 SER A 62 ARG A 106 HOH A 270 HOH A 312 SITE 4 AC1 15 HOH A 314 HOH A 315 TYR B 100 SITE 1 AC2 4 LYS A 193 ALA A 194 HOH A 250 HOH A 321 SITE 1 AC3 6 GLN A 75 THR A 76 HOH A 263 LYS B 78 SITE 2 AC3 6 GLU B 82 HOH B 257 SITE 1 AC4 5 LEU A 180 GLY A 182 TRP A 183 LYS A 184 SITE 2 AC4 5 GLU A 185 SITE 1 AC5 3 MET A 1 GLU A 26 ASP B 83 SITE 1 AC6 2 SER A 8 ARG A 31 SITE 1 AC7 6 GLN A 29 ASP A 202 HOH A 279 LYS B 193 SITE 2 AC7 6 GOL B 243 HOH B 295 SITE 1 AC8 6 PHE A 140 SER A 141 PRO A 142 TYR A 186 SITE 2 AC8 6 HOH A 297 HOH A 318 SITE 1 AC9 15 TYR A 100 SER B 10 ASN B 11 TYR B 12 SITE 2 AC9 15 PRO B 34 LYS B 48 ILE B 49 PRO B 50 SITE 3 AC9 15 GLU B 61 SER B 62 ARG B 106 HOH B 262 SITE 4 AC9 15 HOH B 272 HOH B 300 HOH B 301 SITE 1 BC1 6 LEU B 180 ASN B 181 GLY B 182 TRP B 183 SITE 2 BC1 6 LYS B 184 GLU B 185 SITE 1 BC2 8 LEU A 198 LYS A 201 ASP A 202 GOL A 247 SITE 2 BC2 8 GLU B 22 TYR B 143 LYS B 193 HOH B 261 SITE 1 BC3 4 ALA B 7 SER B 8 ARG B 31 HOH B 312 CRYST1 82.591 82.591 175.701 90.00 90.00 90.00 P 43 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012108 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012108 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005691 0.00000