HEADER TRANSFERASE/DNA 24-OCT-11 3UBT TITLE CRYSTAL STRUCTURE OF C71S MUTANT OF DNA CYTOSINE-5 METHYLTRANSFERASE TITLE 2 M.HAEIII BOUND TO DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: MODIFICATION METHYLASE HAEIII; COMPND 3 CHAIN: Y, A, B; COMPND 4 SYNONYM: M.HAEIII, CYTOSINE-SPECIFIC METHYLTRANSFERASE HAEIII; COMPND 5 EC: 2.1.1.37; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: 5'-D(*TP*GP*GP*CP*CP*A)-3'; COMPND 10 CHAIN: D, E, F, G, H, C; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HAEMOPHILUS AEGYPTIUS; SOURCE 3 ORGANISM_COMMON: KOCH-WEEKS BACILLUS; SOURCE 4 ORGANISM_TAXID: 197575; SOURCE 5 GENE: HAEIIIM; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: LC1061; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PHN1; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES KEYWDS PROTEIN-DNA COMPLEX, DNA CYTOSINE-5 METHYLTRANSFERASE, DNA BINDING, KEYWDS 2 S-ADENOSYL METHIONINE BINDING, CYTOSINE-5 DNA METHYLATION, KEYWDS 3 TRANSFERASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR G.L.VERDINE,A.DIDOVYK REVDAT 3 28-FEB-24 3UBT 1 REMARK SEQADV REVDAT 2 19-DEC-12 3UBT 1 JRNL REVDAT 1 03-OCT-12 3UBT 0 JRNL AUTH A.DIDOVYK,G.L.VERDINE JRNL TITL STRUCTURAL ORIGINS OF DNA TARGET SELECTION AND NUCLEOBASE JRNL TITL 2 EXTRUSION BY A DNA CYTOSINE METHYLTRANSFERASE. JRNL REF J.BIOL.CHEM. V. 287 40099 2012 JRNL REFN ISSN 0021-9258 JRNL PMID 23012373 JRNL DOI 10.1074/JBC.M112.413054 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6.4_486 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 16.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.9 REMARK 3 NUMBER OF REFLECTIONS : 31673 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.840 REMARK 3 FREE R VALUE TEST SET COUNT : 1533 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 16.9817 - 5.5071 0.90 2892 126 0.2010 0.2808 REMARK 3 2 5.5071 - 4.3961 0.94 2854 151 0.1496 0.1720 REMARK 3 3 4.3961 - 3.8478 0.94 2830 154 0.1442 0.1575 REMARK 3 4 3.8478 - 3.4993 0.95 2852 159 0.1565 0.1909 REMARK 3 5 3.4993 - 3.2504 0.94 2795 159 0.1805 0.2180 REMARK 3 6 3.2504 - 3.0599 0.93 2805 149 0.1880 0.2400 REMARK 3 7 3.0599 - 2.9075 0.93 2780 127 0.1970 0.2168 REMARK 3 8 2.9075 - 2.7815 0.94 2793 143 0.1970 0.2722 REMARK 3 9 2.7815 - 2.6748 0.93 2808 108 0.2264 0.2840 REMARK 3 10 2.6748 - 2.5829 0.93 2743 138 0.2376 0.3283 REMARK 3 11 2.5829 - 2.5024 0.68 1988 119 0.2451 0.2967 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 30.01 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.560 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.73 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.44190 REMARK 3 B22 (A**2) : 3.87270 REMARK 3 B33 (A**2) : 0.56910 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 8959 REMARK 3 ANGLE : 0.642 12255 REMARK 3 CHIRALITY : 0.044 1292 REMARK 3 PLANARITY : 0.002 1456 REMARK 3 DIHEDRAL : 14.252 3388 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 14 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND RESID 191:197) REMARK 3 SELECTION : (CHAIN B AND RESID 191:197) REMARK 3 ATOM PAIRS NUMBER : 48 REMARK 3 RMSD : 0.008 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN A AND RESID 191:197) REMARK 3 SELECTION : (CHAIN Y AND RESID 191:197) REMARK 3 ATOM PAIRS NUMBER : 51 REMARK 3 RMSD : 0.008 REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND RESID 212:219) AND NOT REMARK 3 (RESID 216) REMARK 3 SELECTION : (CHAIN B AND RESID 212:219) AND NOT REMARK 3 (RESID 216) REMARK 3 ATOM PAIRS NUMBER : 64 REMARK 3 RMSD : 0.009 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN A AND RESID 212:219) AND NOT REMARK 3 (RESID 216) REMARK 3 SELECTION : (CHAIN Y AND RESID 212:219) AND NOT REMARK 3 (RESID 216) REMARK 3 ATOM PAIRS NUMBER : 64 REMARK 3 RMSD : 0.007 REMARK 3 NCS GROUP : 3 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND RESID 223:238) AND NOT REMARK 3 (RESID 225 OR RESID 229) REMARK 3 SELECTION : (CHAIN B AND RESID 223:238) AND NOT REMARK 3 (RESID 225 OR RESID 229) REMARK 3 ATOM PAIRS NUMBER : 117 REMARK 3 RMSD : 0.007 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN A AND RESID 223:238) AND NOT REMARK 3 (RESID 225 OR RESID 229) REMARK 3 SELECTION : (CHAIN Y AND RESID 223:238) AND NOT REMARK 3 (RESID 225 OR RESID 229) REMARK 3 ATOM PAIRS NUMBER : 117 REMARK 3 RMSD : 0.006 REMARK 3 NCS GROUP : 4 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND RESID 245:250) AND NOT REMARK 3 (RESID 248) REMARK 3 SELECTION : (CHAIN B AND RESID 245:250) AND NOT REMARK 3 (RESID 248) REMARK 3 ATOM PAIRS NUMBER : 39 REMARK 3 RMSD : 0.007 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN A AND RESID 245:250) AND NOT REMARK 3 (RESID 248) REMARK 3 SELECTION : (CHAIN Y AND RESID 245:250) AND NOT REMARK 3 (RESID 248) REMARK 3 ATOM PAIRS NUMBER : 39 REMARK 3 RMSD : 0.006 REMARK 3 NCS GROUP : 5 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND RESID 276:305) AND NOT REMARK 3 (RESID 289 OR RESID 291 OR RESID 293 OR REMARK 3 RESID 295 OR RESID 299) REMARK 3 SELECTION : (CHAIN B AND RESID 276:305) AND NOT REMARK 3 (RESID 289 OR RESID 291 OR RESID 293 OR REMARK 3 RESID 295 OR RESID 299) REMARK 3 ATOM PAIRS NUMBER : 203 REMARK 3 RMSD : 0.008 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN A AND RESID 276:305) AND NOT REMARK 3 (RESID 289 OR RESID 291 OR RESID 293 OR REMARK 3 RESID 295 OR RESID 299) REMARK 3 SELECTION : (CHAIN Y AND RESID 276:305) AND NOT REMARK 3 (RESID 289 OR RESID 291 OR RESID 293 OR REMARK 3 RESID 295 OR RESID 299) REMARK 3 ATOM PAIRS NUMBER : 203 REMARK 3 RMSD : 0.007 REMARK 3 NCS GROUP : 6 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 2:5)) REMARK 3 SELECTION : (CHAIN B AND (RESID 2:5)) REMARK 3 ATOM PAIRS NUMBER : 30 REMARK 3 RMSD : 0.006 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 2:5)) REMARK 3 SELECTION : (CHAIN Y AND (RESID 2:5)) REMARK 3 ATOM PAIRS NUMBER : 30 REMARK 3 RMSD : 0.009 REMARK 3 NCS GROUP : 7 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 15:17)) REMARK 3 SELECTION : (CHAIN B AND (RESID 15:17)) REMARK 3 ATOM PAIRS NUMBER : 23 REMARK 3 RMSD : 0.009 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 15:17)) REMARK 3 SELECTION : (CHAIN Y AND (RESID 15:17)) REMARK 3 ATOM PAIRS NUMBER : 23 REMARK 3 RMSD : 0.006 REMARK 3 NCS GROUP : 8 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 22:47)) AND NOT REMARK 3 (RESID 30 OR RESID 35:36) REMARK 3 SELECTION : (CHAIN B AND (RESID 22:47)) AND NOT REMARK 3 (RESID 30 OR RESID 35:36) REMARK 3 ATOM PAIRS NUMBER : 185 REMARK 3 RMSD : 0.008 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 22:47)) AND NOT REMARK 3 (RESID 30 OR RESID 35:36) REMARK 3 SELECTION : (CHAIN Y AND (RESID 22:47)) AND NOT REMARK 3 (RESID 30 OR RESID 35:36) REMARK 3 ATOM PAIRS NUMBER : 183 REMARK 3 RMSD : 0.006 REMARK 3 NCS GROUP : 9 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 59:68)) AND NOT REMARK 3 (RESID 61) REMARK 3 SELECTION : (CHAIN B AND (RESID 59:68)) AND NOT REMARK 3 (RESID 61) REMARK 3 ATOM PAIRS NUMBER : 60 REMARK 3 RMSD : 0.006 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 59:68)) AND NOT REMARK 3 (RESID 61) REMARK 3 SELECTION : (CHAIN Y AND (RESID 59:68)) AND NOT REMARK 3 (RESID 61) REMARK 3 ATOM PAIRS NUMBER : 60 REMARK 3 RMSD : 0.006 REMARK 3 NCS GROUP : 10 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 71:82)) AND NOT REMARK 3 (RESID 72 OR RESID 75:76) REMARK 3 SELECTION : (CHAIN B AND (RESID 71:82)) AND NOT REMARK 3 (RESID 72 OR RESID 75:76) REMARK 3 ATOM PAIRS NUMBER : 63 REMARK 3 RMSD : 0.008 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 71:82)) AND NOT REMARK 3 (RESID 72 OR RESID 75:76) REMARK 3 SELECTION : (CHAIN Y AND (RESID 71:82)) AND NOT REMARK 3 (RESID 72 OR RESID 75:76) REMARK 3 ATOM PAIRS NUMBER : 63 REMARK 3 RMSD : 0.007 REMARK 3 NCS GROUP : 11 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 99:110)) AND NOT REMARK 3 (RESID 100 OR RESID 102 RESID 105) REMARK 3 SELECTION : (CHAIN B AND (RESID 99:110)) AND NOT REMARK 3 (RESID 100 OR RESID 102 RESID 105) REMARK 3 ATOM PAIRS NUMBER : 9 REMARK 3 RMSD : 0.007 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 99:110)) AND NOT REMARK 3 (RESID 100 OR RESID 102 RESID 105) REMARK 3 SELECTION : (CHAIN Y AND (RESID 99:110)) AND NOT REMARK 3 (RESID 100 OR RESID 102 RESID 105) REMARK 3 ATOM PAIRS NUMBER : 9 REMARK 3 RMSD : 0.017 REMARK 3 NCS GROUP : 12 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 122:162)) AND NOT REMARK 3 (RESID 132 OR RESID 137 OR RESID 140:141 REMARK 3 OR RESID 144 OR RESID 146:147) REMARK 3 SELECTION : (CHAIN B AND (RESID 122:162)) AND NOT REMARK 3 (RESID 132 OR RESID 137 OR RESID 140:141 REMARK 3 OR RESID 144 OR RESID 146:147) REMARK 3 ATOM PAIRS NUMBER : 285 REMARK 3 RMSD : 0.007 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 122:162)) AND NOT REMARK 3 (RESID 132 OR RESID 137 OR RESID 140:141 REMARK 3 OR RESID 144 OR RESID 146:147) REMARK 3 SELECTION : (CHAIN Y AND (RESID 122:162)) AND NOT REMARK 3 (RESID 132 OR RESID 137 OR RESID 140:141 REMARK 3 OR RESID 144 OR RESID 146:147) REMARK 3 ATOM PAIRS NUMBER : 285 REMARK 3 RMSD : 0.007 REMARK 3 NCS GROUP : 13 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 167:169)) REMARK 3 SELECTION : (CHAIN B AND (RESID 167:169)) REMARK 3 ATOM PAIRS NUMBER : 28 REMARK 3 RMSD : 0.006 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 167:169)) REMARK 3 SELECTION : (CHAIN Y AND (RESID 167:169)) REMARK 3 ATOM PAIRS NUMBER : 28 REMARK 3 RMSD : 0.007 REMARK 3 NCS GROUP : 14 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 308:324)) AND NOT REMARK 3 (RESID 311 OR RESID 318 OR RESID 321 OR REMARK 3 RESID 261 OR RESID 295) REMARK 3 SELECTION : (CHAIN B AND (RESID 308:324)) AND NOT REMARK 3 (RESID 311 OR RESID 318 OR RESID 321 OR REMARK 3 RESID 261 OR RESID 295) REMARK 3 ATOM PAIRS NUMBER : 102 REMARK 3 RMSD : 0.009 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 308:324)) AND NOT REMARK 3 (RESID 311 OR RESID 318 OR RESID 321 OR REMARK 3 RESID 261 OR RESID 295) REMARK 3 SELECTION : (CHAIN Y AND (RESID 308:324)) AND NOT REMARK 3 (RESID 311 OR RESID 318 OR RESID 321 OR REMARK 3 RESID 261 OR RESID 295) REMARK 3 ATOM PAIRS NUMBER : 102 REMARK 3 RMSD : 0.007 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3UBT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-NOV-11. REMARK 100 THE DEPOSITION ID IS D_1000068556. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-NOV-08 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 6 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31721 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 17.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.4 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.12200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.9300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 70.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.46 REMARK 200 R MERGE FOR SHELL (I) : 0.37000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.410 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 26-27% (V/V) PENTAERYTHRITOL REMARK 280 ETHOXYLATE (15/4 EO/OH), 100 MM AMMONIUM SULFATE, 50 MM BIS-TRIS REMARK 280 PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.78200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.19050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 64.79400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.19050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.78200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 64.79400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: Y, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY Y 329 REMARK 465 ASN Y 330 REMARK 465 ASN Y 331 REMARK 465 GLY A 329 REMARK 465 ASN A 330 REMARK 465 ASN A 331 REMARK 465 GLY B 329 REMARK 465 ASN B 330 REMARK 465 ASN B 331 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN Y 18 OE1 NE2 REMARK 470 LYS Y 32 CE NZ REMARK 470 LYS Y 36 CE NZ REMARK 470 LYS Y 61 CD CE NZ REMARK 470 GLN Y 72 CG CD OE1 NE2 REMARK 470 HIS Y 119 CG ND1 CD2 CE1 NE2 REMARK 470 LYS Y 198 CD CE NZ REMARK 470 LYS Y 259 CG CD CE NZ REMARK 470 LYS Y 263 CE NZ REMARK 470 GLU Y 295 CG CD OE1 OE2 REMARK 470 GLN A 18 OE1 NE2 REMARK 470 LYS A 36 CE NZ REMARK 470 LYS A 53 CG CD CE NZ REMARK 470 LYS A 61 CG CD CE NZ REMARK 470 GLN A 72 CD OE1 NE2 REMARK 470 ARG A 87 NE CZ NH1 NH2 REMARK 470 LYS A 182 CD CE NZ REMARK 470 LYS A 205 CG CD CE NZ REMARK 470 LYS A 256 CD CE NZ REMARK 470 LYS A 259 CG CD CE NZ REMARK 470 GLU A 295 OE1 OE2 REMARK 470 LYS A 318 CG CD CE NZ REMARK 470 LYS B 36 CE NZ REMARK 470 LYS B 61 CG CD CE NZ REMARK 470 GLN B 72 CG CD OE1 NE2 REMARK 470 LYS B 112 CG CD CE NZ REMARK 470 ASP B 197 CG OD1 OD2 REMARK 470 ASN B 204 CG OD1 ND2 REMARK 470 GLU B 266 CG CD OE1 OE2 REMARK 470 LYS B 268 CE NZ REMARK 470 GLU B 295 CG CD OE1 OE2 REMARK 470 LYS B 318 CD CE NZ REMARK 470 DA H 12 C8 N7 C5 C6 N6 N1 C2 REMARK 470 DA H 12 N3 C4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG D 6 O4' - C1' - N9 ANGL. DEV. = 3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS Y 119 21.25 -79.31 REMARK 500 TYR Y 147 49.39 -141.70 REMARK 500 HIS A 119 42.89 -90.11 REMARK 500 ASN B 210 14.03 58.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 ATP Y 333 REMARK 610 2PE Y 335 REMARK 610 2PE A 334 REMARK 610 2PE B 333 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL Y 332 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP Y 333 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP Y 334 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2PE Y 335 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 332 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 333 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2PE A 334 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 332 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2PE B 333 DBREF 3UBT Y 1 330 UNP P20589 MTH3_HAEAE 1 330 DBREF 3UBT A 1 330 UNP P20589 MTH3_HAEAE 1 330 DBREF 3UBT B 1 330 UNP P20589 MTH3_HAEAE 1 330 DBREF 3UBT D 4 9 PDB 3UBT 3UBT 4 9 DBREF 3UBT E 4 9 PDB 3UBT 3UBT 4 9 DBREF 3UBT F 7 12 PDB 3UBT 3UBT 7 12 DBREF 3UBT G 4 9 PDB 3UBT 3UBT 4 9 DBREF 3UBT H 7 12 PDB 3UBT 3UBT 7 12 DBREF 3UBT C 7 12 PDB 3UBT 3UBT 7 12 SEQADV 3UBT SER Y 71 UNP P20589 CYS 71 ENGINEERED MUTATION SEQADV 3UBT ASN Y 331 UNP P20589 EXPRESSION TAG SEQADV 3UBT SER A 71 UNP P20589 CYS 71 ENGINEERED MUTATION SEQADV 3UBT ASN A 331 UNP P20589 EXPRESSION TAG SEQADV 3UBT SER B 71 UNP P20589 CYS 71 ENGINEERED MUTATION SEQADV 3UBT ASN B 331 UNP P20589 EXPRESSION TAG SEQRES 1 Y 331 MET ASN LEU ILE SER LEU PHE SER GLY ALA GLY GLY LEU SEQRES 2 Y 331 ASP LEU GLY PHE GLN LYS ALA GLY PHE ARG ILE ILE CYS SEQRES 3 Y 331 ALA ASN GLU TYR ASP LYS SER ILE TRP LYS THR TYR GLU SEQRES 4 Y 331 SER ASN HIS SER ALA LYS LEU ILE LYS GLY ASP ILE SER SEQRES 5 Y 331 LYS ILE SER SER ASP GLU PHE PRO LYS CYS ASP GLY ILE SEQRES 6 Y 331 ILE GLY GLY PRO PRO SER GLN SER TRP SER GLU GLY GLY SEQRES 7 Y 331 SER LEU ARG GLY ILE ASP ASP PRO ARG GLY LYS LEU PHE SEQRES 8 Y 331 TYR GLU TYR ILE ARG ILE LEU LYS GLN LYS LYS PRO ILE SEQRES 9 Y 331 PHE PHE LEU ALA GLU ASN VAL LYS GLY MET MET ALA GLN SEQRES 10 Y 331 ARG HIS ASN LYS ALA VAL GLN GLU PHE ILE GLN GLU PHE SEQRES 11 Y 331 ASP ASN ALA GLY TYR ASP VAL HIS ILE ILE LEU LEU ASN SEQRES 12 Y 331 ALA ASN ASP TYR GLY VAL ALA GLN ASP ARG LYS ARG VAL SEQRES 13 Y 331 PHE TYR ILE GLY PHE ARG LYS GLU LEU ASN ILE ASN TYR SEQRES 14 Y 331 LEU PRO PRO ILE PRO HIS LEU ILE LYS PRO THR PHE LYS SEQRES 15 Y 331 ASP VAL ILE TRP ASP LEU LYS ASP ASN PRO ILE PRO ALA SEQRES 16 Y 331 LEU ASP LYS ASN LYS THR ASN GLY ASN LYS CYS ILE TYR SEQRES 17 Y 331 PRO ASN HIS GLU TYR PHE ILE GLY SER TYR SER THR ILE SEQRES 18 Y 331 PHE MET SER ARG ASN ARG VAL ARG GLN TRP ASN GLU PRO SEQRES 19 Y 331 ALA PHE THR VAL GLN ALA SER GLY ARG GLN CYS GLN LEU SEQRES 20 Y 331 HIS PRO GLN ALA PRO VAL MET LEU LYS VAL SER LYS ASN SEQRES 21 Y 331 LEU ASN LYS PHE VAL GLU GLY LYS GLU HIS LEU TYR ARG SEQRES 22 Y 331 ARG LEU THR VAL ARG GLU CYS ALA ARG VAL GLN GLY PHE SEQRES 23 Y 331 PRO ASP ASP PHE ILE PHE HIS TYR GLU SER LEU ASN ASP SEQRES 24 Y 331 GLY TYR LYS MET ILE GLY ASN ALA VAL PRO VAL ASN LEU SEQRES 25 Y 331 ALA TYR GLU ILE ALA LYS THR ILE LYS SER ALA LEU GLU SEQRES 26 Y 331 ILE CYS LYS GLY ASN ASN SEQRES 1 A 331 MET ASN LEU ILE SER LEU PHE SER GLY ALA GLY GLY LEU SEQRES 2 A 331 ASP LEU GLY PHE GLN LYS ALA GLY PHE ARG ILE ILE CYS SEQRES 3 A 331 ALA ASN GLU TYR ASP LYS SER ILE TRP LYS THR TYR GLU SEQRES 4 A 331 SER ASN HIS SER ALA LYS LEU ILE LYS GLY ASP ILE SER SEQRES 5 A 331 LYS ILE SER SER ASP GLU PHE PRO LYS CYS ASP GLY ILE SEQRES 6 A 331 ILE GLY GLY PRO PRO SER GLN SER TRP SER GLU GLY GLY SEQRES 7 A 331 SER LEU ARG GLY ILE ASP ASP PRO ARG GLY LYS LEU PHE SEQRES 8 A 331 TYR GLU TYR ILE ARG ILE LEU LYS GLN LYS LYS PRO ILE SEQRES 9 A 331 PHE PHE LEU ALA GLU ASN VAL LYS GLY MET MET ALA GLN SEQRES 10 A 331 ARG HIS ASN LYS ALA VAL GLN GLU PHE ILE GLN GLU PHE SEQRES 11 A 331 ASP ASN ALA GLY TYR ASP VAL HIS ILE ILE LEU LEU ASN SEQRES 12 A 331 ALA ASN ASP TYR GLY VAL ALA GLN ASP ARG LYS ARG VAL SEQRES 13 A 331 PHE TYR ILE GLY PHE ARG LYS GLU LEU ASN ILE ASN TYR SEQRES 14 A 331 LEU PRO PRO ILE PRO HIS LEU ILE LYS PRO THR PHE LYS SEQRES 15 A 331 ASP VAL ILE TRP ASP LEU LYS ASP ASN PRO ILE PRO ALA SEQRES 16 A 331 LEU ASP LYS ASN LYS THR ASN GLY ASN LYS CYS ILE TYR SEQRES 17 A 331 PRO ASN HIS GLU TYR PHE ILE GLY SER TYR SER THR ILE SEQRES 18 A 331 PHE MET SER ARG ASN ARG VAL ARG GLN TRP ASN GLU PRO SEQRES 19 A 331 ALA PHE THR VAL GLN ALA SER GLY ARG GLN CYS GLN LEU SEQRES 20 A 331 HIS PRO GLN ALA PRO VAL MET LEU LYS VAL SER LYS ASN SEQRES 21 A 331 LEU ASN LYS PHE VAL GLU GLY LYS GLU HIS LEU TYR ARG SEQRES 22 A 331 ARG LEU THR VAL ARG GLU CYS ALA ARG VAL GLN GLY PHE SEQRES 23 A 331 PRO ASP ASP PHE ILE PHE HIS TYR GLU SER LEU ASN ASP SEQRES 24 A 331 GLY TYR LYS MET ILE GLY ASN ALA VAL PRO VAL ASN LEU SEQRES 25 A 331 ALA TYR GLU ILE ALA LYS THR ILE LYS SER ALA LEU GLU SEQRES 26 A 331 ILE CYS LYS GLY ASN ASN SEQRES 1 B 331 MET ASN LEU ILE SER LEU PHE SER GLY ALA GLY GLY LEU SEQRES 2 B 331 ASP LEU GLY PHE GLN LYS ALA GLY PHE ARG ILE ILE CYS SEQRES 3 B 331 ALA ASN GLU TYR ASP LYS SER ILE TRP LYS THR TYR GLU SEQRES 4 B 331 SER ASN HIS SER ALA LYS LEU ILE LYS GLY ASP ILE SER SEQRES 5 B 331 LYS ILE SER SER ASP GLU PHE PRO LYS CYS ASP GLY ILE SEQRES 6 B 331 ILE GLY GLY PRO PRO SER GLN SER TRP SER GLU GLY GLY SEQRES 7 B 331 SER LEU ARG GLY ILE ASP ASP PRO ARG GLY LYS LEU PHE SEQRES 8 B 331 TYR GLU TYR ILE ARG ILE LEU LYS GLN LYS LYS PRO ILE SEQRES 9 B 331 PHE PHE LEU ALA GLU ASN VAL LYS GLY MET MET ALA GLN SEQRES 10 B 331 ARG HIS ASN LYS ALA VAL GLN GLU PHE ILE GLN GLU PHE SEQRES 11 B 331 ASP ASN ALA GLY TYR ASP VAL HIS ILE ILE LEU LEU ASN SEQRES 12 B 331 ALA ASN ASP TYR GLY VAL ALA GLN ASP ARG LYS ARG VAL SEQRES 13 B 331 PHE TYR ILE GLY PHE ARG LYS GLU LEU ASN ILE ASN TYR SEQRES 14 B 331 LEU PRO PRO ILE PRO HIS LEU ILE LYS PRO THR PHE LYS SEQRES 15 B 331 ASP VAL ILE TRP ASP LEU LYS ASP ASN PRO ILE PRO ALA SEQRES 16 B 331 LEU ASP LYS ASN LYS THR ASN GLY ASN LYS CYS ILE TYR SEQRES 17 B 331 PRO ASN HIS GLU TYR PHE ILE GLY SER TYR SER THR ILE SEQRES 18 B 331 PHE MET SER ARG ASN ARG VAL ARG GLN TRP ASN GLU PRO SEQRES 19 B 331 ALA PHE THR VAL GLN ALA SER GLY ARG GLN CYS GLN LEU SEQRES 20 B 331 HIS PRO GLN ALA PRO VAL MET LEU LYS VAL SER LYS ASN SEQRES 21 B 331 LEU ASN LYS PHE VAL GLU GLY LYS GLU HIS LEU TYR ARG SEQRES 22 B 331 ARG LEU THR VAL ARG GLU CYS ALA ARG VAL GLN GLY PHE SEQRES 23 B 331 PRO ASP ASP PHE ILE PHE HIS TYR GLU SER LEU ASN ASP SEQRES 24 B 331 GLY TYR LYS MET ILE GLY ASN ALA VAL PRO VAL ASN LEU SEQRES 25 B 331 ALA TYR GLU ILE ALA LYS THR ILE LYS SER ALA LEU GLU SEQRES 26 B 331 ILE CYS LYS GLY ASN ASN SEQRES 1 D 6 DT DG DG DC DC DA SEQRES 1 E 6 DT DG DG DC DC DA SEQRES 1 F 6 DT DG DG DC DC DA SEQRES 1 G 6 DT DG DG DC DC DA SEQRES 1 H 6 DT DG DG DC DC DA SEQRES 1 C 6 DT DG DG DC DC DA HET CL Y 332 1 HET ATP Y 333 23 HET ATP Y 334 31 HET 2PE Y 335 13 HET CL A 332 1 HET ATP A 333 31 HET 2PE A 334 8 HET CL B 332 1 HET 2PE B 333 13 HETNAM CL CHLORIDE ION HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM 2PE NONAETHYLENE GLYCOL FORMUL 10 CL 3(CL 1-) FORMUL 11 ATP 3(C10 H16 N5 O13 P3) FORMUL 13 2PE 3(C18 H38 O10) FORMUL 19 HOH *568(H2 O) HELIX 1 1 GLY Y 11 ALA Y 20 1 10 HELIX 2 2 ILE Y 34 HIS Y 42 1 9 HELIX 3 3 ASP Y 50 ILE Y 54 5 5 HELIX 4 4 SER Y 55 PHE Y 59 5 5 HELIX 5 5 PRO Y 70 SER Y 73 5 4 HELIX 6 6 ASP Y 85 ARG Y 87 5 3 HELIX 7 7 GLY Y 88 LYS Y 102 1 15 HELIX 8 8 LYS Y 112 GLN Y 117 5 6 HELIX 9 9 ASN Y 120 GLY Y 134 1 15 HELIX 10 10 ASN Y 145 TYR Y 147 5 3 HELIX 11 11 GLU Y 164 ASN Y 166 5 3 HELIX 12 12 THR Y 180 VAL Y 184 5 5 HELIX 13 13 ILE Y 185 LYS Y 189 5 5 HELIX 14 14 LEU Y 196 LYS Y 200 5 5 HELIX 15 15 ASN Y 202 CYS Y 206 5 5 HELIX 16 16 ILE Y 221 ARG Y 225 5 5 HELIX 17 17 LYS Y 268 TYR Y 272 5 5 HELIX 18 18 THR Y 276 GLY Y 285 1 10 HELIX 19 19 SER Y 296 ASN Y 306 1 11 HELIX 20 20 PRO Y 309 CYS Y 327 1 19 HELIX 21 21 GLY A 11 ALA A 20 1 10 HELIX 22 22 ILE A 34 HIS A 42 1 9 HELIX 23 23 SER A 55 PHE A 59 5 5 HELIX 24 24 PRO A 70 SER A 73 5 4 HELIX 25 25 ASP A 85 ARG A 87 5 3 HELIX 26 26 GLY A 88 LYS A 102 1 15 HELIX 27 27 LYS A 112 GLN A 117 5 6 HELIX 28 28 ASN A 120 GLY A 134 1 15 HELIX 29 29 ASN A 145 TYR A 147 5 3 HELIX 30 30 GLU A 164 ASN A 166 5 3 HELIX 31 31 PHE A 181 TRP A 186 1 6 HELIX 32 32 ASP A 187 LYS A 189 5 3 HELIX 33 33 LEU A 196 LYS A 200 5 5 HELIX 34 34 ASN A 202 CYS A 206 5 5 HELIX 35 35 SER A 219 SER A 224 1 6 HELIX 36 36 LYS A 268 TYR A 272 5 5 HELIX 37 37 THR A 276 GLY A 285 1 10 HELIX 38 38 SER A 296 ALA A 307 1 12 HELIX 39 39 PRO A 309 CYS A 327 1 19 HELIX 40 40 GLY B 11 ALA B 20 1 10 HELIX 41 41 ILE B 34 HIS B 42 1 9 HELIX 42 42 SER B 55 PHE B 59 5 5 HELIX 43 43 PRO B 70 TRP B 74 5 5 HELIX 44 44 ASP B 85 ARG B 87 5 3 HELIX 45 45 GLY B 88 LYS B 102 1 15 HELIX 46 46 LYS B 112 GLN B 117 5 6 HELIX 47 47 ASN B 120 GLY B 134 1 15 HELIX 48 48 ASN B 145 TYR B 147 5 3 HELIX 49 49 GLU B 164 ASN B 166 5 3 HELIX 50 50 THR B 180 VAL B 184 5 5 HELIX 51 51 ILE B 185 LYS B 189 5 5 HELIX 52 52 ASN B 202 CYS B 206 5 5 HELIX 53 53 SER B 219 SER B 224 1 6 HELIX 54 54 LYS B 268 TYR B 272 5 5 HELIX 55 55 THR B 276 GLY B 285 1 10 HELIX 56 56 SER B 296 ASN B 306 1 11 HELIX 57 57 PRO B 309 LYS B 328 1 20 SHEET 1 A 7 LYS Y 45 LYS Y 48 0 SHEET 2 A 7 ARG Y 23 GLU Y 29 1 N ALA Y 27 O ILE Y 47 SHEET 3 A 7 ASN Y 2 LEU Y 6 1 N LEU Y 3 O ARG Y 23 SHEET 4 A 7 GLY Y 64 ILE Y 66 1 O ILE Y 66 N ILE Y 4 SHEET 5 A 7 PHE Y 105 ASN Y 110 1 O LEU Y 107 N ILE Y 65 SHEET 6 A 7 LYS Y 154 ARG Y 162 -1 O TYR Y 158 N ALA Y 108 SHEET 7 A 7 TYR Y 135 ASN Y 143 -1 N ASP Y 136 O PHE Y 161 SHEET 1 B 2 SER Y 75 GLU Y 76 0 SHEET 2 B 2 SER Y 79 LEU Y 80 -1 O SER Y 79 N GLU Y 76 SHEET 1 C 2 ILE Y 193 PRO Y 194 0 SHEET 2 C 2 GLU Y 212 TYR Y 213 1 O TYR Y 213 N ILE Y 193 SHEET 1 D 2 LEU Y 255 SER Y 258 0 SHEET 2 D 2 LEU Y 261 LYS Y 263 -1 O LEU Y 261 N VAL Y 257 SHEET 1 E 7 LYS A 45 LYS A 48 0 SHEET 2 E 7 ARG A 23 GLU A 29 1 N ALA A 27 O ILE A 47 SHEET 3 E 7 ASN A 2 LEU A 6 1 N LEU A 3 O ARG A 23 SHEET 4 E 7 GLY A 64 ILE A 66 1 O ILE A 66 N ILE A 4 SHEET 5 E 7 PHE A 105 ASN A 110 1 O LEU A 107 N ILE A 65 SHEET 6 E 7 LYS A 154 ARG A 162 -1 O TYR A 158 N ALA A 108 SHEET 7 E 7 TYR A 135 ASN A 143 -1 N ASP A 136 O PHE A 161 SHEET 1 F 2 SER A 75 GLU A 76 0 SHEET 2 F 2 SER A 79 LEU A 80 -1 O SER A 79 N GLU A 76 SHEET 1 G 2 ILE A 193 PRO A 194 0 SHEET 2 G 2 GLU A 212 TYR A 213 1 O TYR A 213 N ILE A 193 SHEET 1 H 2 LEU A 255 SER A 258 0 SHEET 2 H 2 LEU A 261 LYS A 263 -1 O LEU A 261 N VAL A 257 SHEET 1 I 7 LYS B 45 ILE B 47 0 SHEET 2 I 7 ARG B 23 ASN B 28 1 N ALA B 27 O ILE B 47 SHEET 3 I 7 ASN B 2 LEU B 6 1 N LEU B 3 O ARG B 23 SHEET 4 I 7 GLY B 64 ILE B 66 1 O ILE B 66 N ILE B 4 SHEET 5 I 7 PHE B 105 ASN B 110 1 O PHE B 105 N ILE B 65 SHEET 6 I 7 LYS B 154 ARG B 162 -1 O TYR B 158 N ALA B 108 SHEET 7 I 7 TYR B 135 ASN B 143 -1 N ASP B 136 O PHE B 161 SHEET 1 J 2 ILE B 193 PRO B 194 0 SHEET 2 J 2 GLU B 212 TYR B 213 1 O TYR B 213 N ILE B 193 SHEET 1 K 2 LEU B 255 SER B 258 0 SHEET 2 K 2 LEU B 261 LYS B 263 -1 O LYS B 263 N LEU B 255 SITE 1 AC1 2 DC H 11 SER Y 241 SITE 1 AC2 12 SER A 258 LYS A 259 GLU Y 29 TYR Y 30 SITE 2 AC2 12 ASP Y 50 ILE Y 51 LEU Y 90 HOH Y 359 SITE 3 AC2 12 HOH Y 368 HOH Y 461 HOH Y 491 HOH Y 501 SITE 1 AC3 13 GLU B 29 TYR B 30 ASP B 50 ILE B 51 SITE 2 AC3 13 PRO B 70 LEU B 90 LYS B 302 SER Y 258 SITE 3 AC3 13 LYS Y 259 ASN Y 260 HOH Y 344 HOH Y 424 SITE 4 AC3 13 HOH Y 463 SITE 1 AC4 6 PRO B 192 GLN B 250 LYS Y 182 TRP Y 186 SITE 2 AC4 6 TRP Y 231 ASN Y 232 SITE 1 AC5 2 SER A 241 DC F 11 SITE 1 AC6 10 GLU A 29 TYR A 30 ASP A 50 ILE A 51 SITE 2 AC6 10 ASN A 306 HOH A 361 HOH A 457 HOH A 524 SITE 3 AC6 10 HOH A 565 LYS B 259 SITE 1 AC7 4 LYS A 182 TRP A 186 PRO Y 192 PRO Y 194 SITE 1 AC8 3 SER B 241 DC C 11 HOH Y 479 SITE 1 AC9 5 PRO A 194 ALA A 195 LYS B 182 TRP B 186 SITE 2 AC9 5 TRP B 231 CRYST1 57.564 129.588 132.381 90.00 90.00 90.00 P 21 21 21 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017372 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007717 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007554 0.00000 MTRIX1 1 -0.999076 -0.035870 -0.023674 -1.62613 1 MTRIX2 1 -0.033066 0.993410 -0.109746 -27.81120 1 MTRIX3 1 0.027455 -0.108862 -0.993678 -68.14930 1 MTRIX1 2 0.999467 -0.029305 0.014411 0.81060 1 MTRIX2 2 0.028731 0.998844 0.038532 -42.59400 1 MTRIX3 2 -0.015523 -0.038097 0.999153 0.84377 1 MTRIX1 3 -0.999126 -0.024390 -0.033958 -2.00544 1 MTRIX2 3 -0.021932 0.997237 -0.070975 -26.65570 1 MTRIX3 3 0.035595 -0.070169 -0.996900 -68.23420 1 MTRIX1 4 0.999679 -0.022230 0.012130 0.58368 1 MTRIX2 4 0.021580 0.998449 0.051324 -42.33400 1 MTRIX3 4 -0.013252 -0.051045 0.998608 1.16304 1 MTRIX1 5 -0.999107 -0.023035 -0.035415 -2.01904 1 MTRIX2 5 -0.020090 0.996481 -0.081371 -27.04180 1 MTRIX3 5 0.037165 -0.080587 -0.996054 -68.26030 1 MTRIX1 6 0.999936 -0.010647 0.003929 0.19127 1 MTRIX2 6 0.010492 0.999243 0.037467 -43.00250 1 MTRIX3 6 -0.004325 -0.037424 0.999290 1.11685 1 MTRIX1 7 -0.998334 -0.030991 -0.048673 -2.53546 1 MTRIX2 7 -0.026558 0.995658 -0.089218 -27.27300 1 MTRIX3 7 0.051227 -0.087777 -0.994822 -68.51680 1 MTRIX1 8 0.999940 -0.010158 0.004025 0.24753 1 MTRIX2 8 0.010025 0.999449 0.031654 -43.16260 1 MTRIX3 8 -0.004344 -0.031612 0.999491 1.14574 1 MTRIX1 9 -0.998988 -0.026978 -0.036000 -2.08510 1 MTRIX2 9 -0.023544 0.995423 -0.092620 -27.40240 1 MTRIX3 9 0.038334 -0.091679 -0.995051 -68.34840 1 MTRIX1 10 0.999816 -0.017507 0.007892 0.32034 1 MTRIX2 10 0.017181 0.999064 0.039701 -42.77050 1 MTRIX3 10 -0.008580 -0.039558 0.999180 1.04512 1 MTRIX1 11 -0.999740 -0.020464 -0.010040 -0.76014 1 MTRIX2 11 -0.019638 0.996877 -0.076491 -26.61640 1 MTRIX3 11 0.011574 -0.076274 -0.997020 -67.85130 1 MTRIX1 12 0.999413 -0.024522 -0.023926 0.20030 1 MTRIX2 12 0.025566 0.998688 0.044373 -42.97370 1 MTRIX3 12 0.022806 -0.044958 0.998728 1.51075 1 MTRIX1 13 -0.999499 0.001570 -0.031597 -1.72553 1 MTRIX2 13 0.003580 0.997964 -0.063685 -26.09560 1 MTRIX3 13 0.031432 -0.063766 -0.997470 -67.89740 1 MTRIX1 14 0.999983 0.000161 0.005772 0.11862 1 MTRIX2 14 -0.000331 0.999564 0.029518 -43.25590 1 MTRIX3 14 -0.005765 -0.029520 0.999548 1.02006 1 MTRIX1 15 -0.999903 -0.009726 -0.010015 -0.62485 1 MTRIX2 15 -0.008941 0.997092 -0.075680 -26.71150 1 MTRIX3 15 0.010722 -0.075583 -0.997082 -67.88220 1 MTRIX1 16 0.999915 -0.008122 -0.010163 0.01857 1 MTRIX2 16 0.008384 0.999627 0.025975 -43.13500 1 MTRIX3 16 0.009948 -0.026058 0.999611 1.19482 1 MTRIX1 17 -0.999778 -0.014325 -0.015431 -1.03355 1 MTRIX2 17 -0.013273 0.997716 -0.066224 -25.98600 1 MTRIX3 17 0.016344 -0.066005 -0.997685 -67.86510 1 MTRIX1 18 0.999930 -0.010532 -0.005396 0.01998 1 MTRIX2 18 0.010636 0.999750 0.019674 -43.11590 1 MTRIX3 18 0.005187 -0.019730 0.999792 1.11366 1 MTRIX1 19 -0.999837 -0.016295 0.007744 0.25230 1 MTRIX2 19 -0.017005 0.994559 -0.102777 -28.31750 1 MTRIX3 19 -0.006027 -0.102892 -0.994674 -68.28980 1 MTRIX1 20 0.999995 0.002881 -0.001305 0.10656 1 MTRIX2 20 -0.002853 0.999778 0.020873 -43.13690 1 MTRIX3 20 0.001365 -0.020869 0.999781 1.26911 1 MTRIX1 21 -0.999864 -0.014526 -0.007833 -0.56864 1 MTRIX2 21 -0.013407 0.991715 -0.127754 -30.56020 1 MTRIX3 21 0.009624 -0.127632 -0.991775 -68.28530 1 MTRIX1 22 0.992138 0.098060 -0.077758 -0.35993 1 MTRIX2 22 -0.096496 0.995053 0.023634 -42.75940 1 MTRIX3 22 0.079691 -0.015945 0.996692 0.99542 1 MTRIX1 23 -0.999862 -0.016322 -0.003134 -0.40382 1 MTRIX2 23 -0.016041 0.997066 -0.074843 -26.66340 1 MTRIX3 23 0.004346 -0.074783 -0.997190 -67.68830 1 MTRIX1 24 0.999888 -0.014354 -0.004284 0.03467 1 MTRIX2 24 0.014468 0.999503 0.028021 -43.10640 1 MTRIX3 24 0.003879 -0.028079 0.999598 1.23502 1 MTRIX1 25 -0.999815 0.001235 -0.019180 -0.89141 1 MTRIX2 25 0.002606 0.997428 -0.071634 -26.53750 1 MTRIX3 25 0.019042 -0.071670 -0.997247 -67.53220 1 MTRIX1 26 0.999956 0.006363 0.006889 0.28632 1 MTRIX2 26 -0.006564 0.999539 0.029652 -43.23240 1 MTRIX3 26 -0.006698 -0.029696 0.999537 1.14268 1 MTRIX1 27 -0.999999 0.001355 -3.460280 0.27332 1 MTRIX2 27 0.001353 0.997220 -0.074495 -26.76090 1 MTRIX3 27 -6.640470 -0.029696 0.999537 -67.58560 1 MTRIX1 28 0.999923 -0.006830 -0.010402 0.02667 1 MTRIX2 28 0.007074 0.999696 0.023636 -43.18540 1 MTRIX3 28 0.010238 -0.023708 0.999667 1.23792 1