data_3UC8 # _entry.id 3UC8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3UC8 pdb_00003uc8 10.2210/pdb3uc8/pdb RCSB RCSB068571 ? ? WWPDB D_1000068571 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-07-18 2 'Structure model' 1 1 2012-08-01 3 'Structure model' 1 2 2012-08-15 4 'Structure model' 1 3 2017-11-08 5 'Structure model' 1 4 2023-09-13 6 'Structure model' 1 5 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' 8 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_site 8 6 'Structure model' pdbx_entry_details 9 6 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.contact_author' 3 4 'Structure model' '_software.contact_author_email' 4 4 'Structure model' '_software.date' 5 4 'Structure model' '_software.language' 6 4 'Structure model' '_software.location' 7 4 'Structure model' '_software.name' 8 4 'Structure model' '_software.type' 9 4 'Structure model' '_software.version' 10 5 'Structure model' '_database_2.pdbx_DOI' 11 5 'Structure model' '_database_2.pdbx_database_accession' 12 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 13 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 14 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 15 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 3UC8 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-10-26 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3UC7 . unspecified PDB 2LL5 . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Scian, M.' 1 'Le Trong, I.' 2 'Stenkamp, R.E.' 3 'Andersen, N.H.' 4 # _citation.id primary _citation.title 'Crystal and NMR structures of a Trp-cage mini-protein benchmark for computational fold prediction.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 109 _citation.page_first 12521 _citation.page_last 12525 _citation.year 2012 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22802678 _citation.pdbx_database_id_DOI 10.1073/pnas.1121421109 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Scian, M.' 1 ? primary 'Lin, J.C.' 2 ? primary 'Le Trong, I.' 3 ? primary 'Makhatadze, G.I.' 4 ? primary 'Stenkamp, R.E.' 5 ? primary 'Andersen, N.H.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn cyclo-TC1 2144.240 3 ? ? ? ? 2 non-polymer syn 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 122.143 1 ? ? ? ? 3 water nat water 18.015 102 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GDAYAQWLADGGPSSGRPPPSG _entity_poly.pdbx_seq_one_letter_code_can GDAYAQWLADGGPSSGRPPPSG _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL TRS 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ASP n 1 3 ALA n 1 4 TYR n 1 5 ALA n 1 6 GLN n 1 7 TRP n 1 8 LEU n 1 9 ALA n 1 10 ASP n 1 11 GLY n 1 12 GLY n 1 13 PRO n 1 14 SER n 1 15 SER n 1 16 GLY n 1 17 ARG n 1 18 PRO n 1 19 PRO n 1 20 PRO n 1 21 SER n 1 22 GLY n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'solid-phase synthesis and cyclization' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TRS non-polymer . 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 'TRIS BUFFER' 'C4 H12 N O3 1' 122.143 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 -1 GLY GLY A . n A 1 2 ASP 2 1 1 ASP ASP A . n A 1 3 ALA 3 2 2 ALA ALA A . n A 1 4 TYR 4 3 3 TYR TYR A . n A 1 5 ALA 5 4 4 ALA ALA A . n A 1 6 GLN 6 5 5 GLN GLN A . n A 1 7 TRP 7 6 6 TRP TRP A . n A 1 8 LEU 8 7 7 LEU LEU A . n A 1 9 ALA 9 8 8 ALA ALA A . n A 1 10 ASP 10 9 9 ASP ASP A . n A 1 11 GLY 11 10 10 GLY GLY A . n A 1 12 GLY 12 11 11 GLY GLY A . n A 1 13 PRO 13 12 12 PRO PRO A . n A 1 14 SER 14 13 13 SER SER A . n A 1 15 SER 15 14 14 SER SER A . n A 1 16 GLY 16 15 15 GLY GLY A . n A 1 17 ARG 17 16 16 ARG ARG A . n A 1 18 PRO 18 17 17 PRO PRO A . n A 1 19 PRO 19 18 18 PRO PRO A . n A 1 20 PRO 20 19 19 PRO PRO A . n A 1 21 SER 21 20 20 SER SER A . n A 1 22 GLY 22 21 21 GLY GLY A . n B 1 1 GLY 1 -1 -1 GLY GLY B . n B 1 2 ASP 2 1 1 ASP ASP B . n B 1 3 ALA 3 2 2 ALA ALA B . n B 1 4 TYR 4 3 3 TYR TYR B . n B 1 5 ALA 5 4 4 ALA ALA B . n B 1 6 GLN 6 5 5 GLN GLN B . n B 1 7 TRP 7 6 6 TRP TRP B . n B 1 8 LEU 8 7 7 LEU LEU B . n B 1 9 ALA 9 8 8 ALA ALA B . n B 1 10 ASP 10 9 9 ASP ASP B . n B 1 11 GLY 11 10 10 GLY GLY B . n B 1 12 GLY 12 11 11 GLY GLY B . n B 1 13 PRO 13 12 12 PRO PRO B . n B 1 14 SER 14 13 13 SER SER B . n B 1 15 SER 15 14 14 SER SER B . n B 1 16 GLY 16 15 15 GLY GLY B . n B 1 17 ARG 17 16 16 ARG ARG B . n B 1 18 PRO 18 17 17 PRO PRO B . n B 1 19 PRO 19 18 18 PRO PRO B . n B 1 20 PRO 20 19 19 PRO PRO B . n B 1 21 SER 21 20 20 SER SER B . n B 1 22 GLY 22 21 21 GLY GLY B . n C 1 1 GLY 1 -1 -1 GLY GLY C . n C 1 2 ASP 2 1 1 ASP ASP C . n C 1 3 ALA 3 2 2 ALA ALA C . n C 1 4 TYR 4 3 3 TYR TYR C . n C 1 5 ALA 5 4 4 ALA ALA C . n C 1 6 GLN 6 5 5 GLN GLN C . n C 1 7 TRP 7 6 6 TRP TRP C . n C 1 8 LEU 8 7 7 LEU LEU C . n C 1 9 ALA 9 8 8 ALA ALA C . n C 1 10 ASP 10 9 9 ASP ASP C . n C 1 11 GLY 11 10 10 GLY GLY C . n C 1 12 GLY 12 11 11 GLY GLY C . n C 1 13 PRO 13 12 12 PRO PRO C . n C 1 14 SER 14 13 13 SER SER C . n C 1 15 SER 15 14 14 SER SER C . n C 1 16 GLY 16 15 15 GLY GLY C . n C 1 17 ARG 17 16 16 ARG ARG C . n C 1 18 PRO 18 17 17 PRO PRO C . n C 1 19 PRO 19 18 18 PRO PRO C . n C 1 20 PRO 20 19 19 PRO PRO C . n C 1 21 SER 21 20 20 SER SER C . n C 1 22 GLY 22 21 21 GLY GLY C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 TRS 1 22 1 TRS TRS C . E 3 HOH 1 1001 1001 HOH HOH A . E 3 HOH 2 1003 1003 HOH HOH A . E 3 HOH 3 1004 1004 HOH HOH A . E 3 HOH 4 1005 1005 HOH HOH A . E 3 HOH 5 1009 1009 HOH HOH A . E 3 HOH 6 1010 1010 HOH HOH A . E 3 HOH 7 1011 1011 HOH HOH A . E 3 HOH 8 1012 1012 HOH HOH A . E 3 HOH 9 1030 1030 HOH HOH A . E 3 HOH 10 1031 1031 HOH HOH A . E 3 HOH 11 1032 1032 HOH HOH A . E 3 HOH 12 1033 1033 HOH HOH A . E 3 HOH 13 1034 1034 HOH HOH A . E 3 HOH 14 1049 1049 HOH HOH A . E 3 HOH 15 1052 1052 HOH HOH A . E 3 HOH 16 1053 1053 HOH HOH A . E 3 HOH 17 1054 1054 HOH HOH A . E 3 HOH 18 1072 1072 HOH HOH A . E 3 HOH 19 1073 1073 HOH HOH A . E 3 HOH 20 1074 1074 HOH HOH A . E 3 HOH 21 1075 1075 HOH HOH A . E 3 HOH 22 1089 1089 HOH HOH A . E 3 HOH 23 1090 1090 HOH HOH A . E 3 HOH 24 1094 1094 HOH HOH A . E 3 HOH 25 1095 1095 HOH HOH A . E 3 HOH 26 1104 1104 HOH HOH A . E 3 HOH 27 1105 1105 HOH HOH A . F 3 HOH 1 1013 1013 HOH HOH B . F 3 HOH 2 1014 1014 HOH HOH B . F 3 HOH 3 1015 1015 HOH HOH B . F 3 HOH 4 1016 1016 HOH HOH B . F 3 HOH 5 1017 1017 HOH HOH B . F 3 HOH 6 1021 1021 HOH HOH B . F 3 HOH 7 1035 1035 HOH HOH B . F 3 HOH 8 1036 1036 HOH HOH B . F 3 HOH 9 1037 1037 HOH HOH B . F 3 HOH 10 1038 1038 HOH HOH B . F 3 HOH 11 1039 1039 HOH HOH B . F 3 HOH 12 1040 1040 HOH HOH B . F 3 HOH 13 1041 1041 HOH HOH B . F 3 HOH 14 1042 1042 HOH HOH B . F 3 HOH 15 1043 1043 HOH HOH B . F 3 HOH 16 1068 1068 HOH HOH B . F 3 HOH 17 1070 1070 HOH HOH B . F 3 HOH 18 1071 1071 HOH HOH B . F 3 HOH 19 1077 1077 HOH HOH B . F 3 HOH 20 1091 1091 HOH HOH B . G 3 HOH 1 1002 1002 HOH HOH C . G 3 HOH 2 1006 1006 HOH HOH C . G 3 HOH 3 1007 1007 HOH HOH C . G 3 HOH 4 1008 1008 HOH HOH C . G 3 HOH 5 1018 1018 HOH HOH C . G 3 HOH 6 1019 1019 HOH HOH C . G 3 HOH 7 1020 1020 HOH HOH C . G 3 HOH 8 1022 1022 HOH HOH C . G 3 HOH 9 1023 1023 HOH HOH C . G 3 HOH 10 1024 1024 HOH HOH C . G 3 HOH 11 1025 1025 HOH HOH C . G 3 HOH 12 1026 1026 HOH HOH C . G 3 HOH 13 1027 1027 HOH HOH C . G 3 HOH 14 1028 1028 HOH HOH C . G 3 HOH 15 1029 1029 HOH HOH C . G 3 HOH 16 1044 1044 HOH HOH C . G 3 HOH 17 1045 1045 HOH HOH C . G 3 HOH 18 1046 1046 HOH HOH C . G 3 HOH 19 1047 1047 HOH HOH C . G 3 HOH 20 1048 1048 HOH HOH C . G 3 HOH 21 1050 1050 HOH HOH C . G 3 HOH 22 1051 1051 HOH HOH C . G 3 HOH 23 1055 1055 HOH HOH C . G 3 HOH 24 1056 1056 HOH HOH C . G 3 HOH 25 1057 1057 HOH HOH C . G 3 HOH 26 1058 1058 HOH HOH C . G 3 HOH 27 1059 1059 HOH HOH C . G 3 HOH 28 1060 1060 HOH HOH C . G 3 HOH 29 1061 1061 HOH HOH C . G 3 HOH 30 1062 1062 HOH HOH C . G 3 HOH 31 1063 1063 HOH HOH C . G 3 HOH 32 1064 1064 HOH HOH C . G 3 HOH 33 1065 1065 HOH HOH C . G 3 HOH 34 1066 1066 HOH HOH C . G 3 HOH 35 1067 1067 HOH HOH C . G 3 HOH 36 1069 1069 HOH HOH C . G 3 HOH 37 1076 1076 HOH HOH C . G 3 HOH 38 1078 1078 HOH HOH C . G 3 HOH 39 1079 1079 HOH HOH C . G 3 HOH 40 1080 1080 HOH HOH C . G 3 HOH 41 1081 1081 HOH HOH C . G 3 HOH 42 1082 1082 HOH HOH C . G 3 HOH 43 1083 1083 HOH HOH C . G 3 HOH 44 1084 1084 HOH HOH C . G 3 HOH 45 1085 1085 HOH HOH C . G 3 HOH 46 1086 1086 HOH HOH C . G 3 HOH 47 1087 1087 HOH HOH C . G 3 HOH 48 1092 1092 HOH HOH C . G 3 HOH 49 1097 1097 HOH HOH C . G 3 HOH 50 1098 1098 HOH HOH C . G 3 HOH 51 1099 1099 HOH HOH C . G 3 HOH 52 1100 1100 HOH HOH C . G 3 HOH 53 1101 1101 HOH HOH C . G 3 HOH 54 1102 1102 HOH HOH C . G 3 HOH 55 1103 1103 HOH HOH C . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 MOLREP . ? program 'Alexei Vaguine' alexei@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ? 4 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 CrystalClear . ? ? ? ? 'data collection' ? ? ? # _cell.length_a 36.848 _cell.length_b 36.848 _cell.length_c 66.212 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3UC8 _cell.pdbx_unique_axis ? _cell.Z_PDB 24 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 43 2 2' _symmetry.entry_id 3UC8 _symmetry.Int_Tables_number 95 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3UC8 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.75 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 29.59 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 2.5 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '0.2 M Tris-HCl, 0.2 M magnesium chloride, 2.0 M sodium chloride, pH 2.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV++' _diffrn_detector.pdbx_collection_date 2008-10-31 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 3UC8 _reflns.d_resolution_high 1.320 _reflns.d_resolution_low 50.0 _reflns.number_obs 9797 _reflns.pdbx_Rmerge_I_obs 0.032 _reflns.pdbx_netI_over_sigmaI 55.6 _reflns.pdbx_chi_squared 1.112 _reflns.pdbx_redundancy 10.0 _reflns.percent_possible_obs 86.2 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.number_all 9797 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.320 1.370 ? ? ? 0.096 ? ? 1.106 2.50 ? 330 29.9 1 1 1.370 1.420 ? ? ? 0.092 ? ? 1.251 5.40 ? 727 66.0 2 1 1.420 1.490 ? ? ? 0.073 ? ? 1.089 9.70 ? 1014 91.8 3 1 1.490 1.570 ? ? ? 0.055 ? ? 1.168 10.90 ? 1038 94.1 4 1 1.570 1.660 ? ? ? 0.049 ? ? 1.055 11.00 ? 1066 95.3 5 1 1.660 1.790 ? ? ? 0.044 ? ? 0.948 11.10 ? 1089 96.3 6 1 1.790 1.970 ? ? ? 0.040 ? ? 1.127 11.10 ? 1093 97.4 7 1 1.970 2.260 ? ? ? 0.043 ? ? 1.200 11.10 ? 1114 97.5 8 1 2.260 2.840 ? ? ? 0.036 ? ? 1.180 11.00 ? 1155 98.2 9 1 2.840 50.000 ? ? ? 0.025 ? ? 1.074 9.60 ? 1171 92.4 10 1 # _refine.entry_id 3UC8 _refine.ls_d_res_high 1.330 _refine.ls_d_res_low 36.85 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 87.5 _refine.ls_number_reflns_obs 9316 _refine.ls_number_reflns_all 9785 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1382 _refine.ls_R_factor_R_work 0.1355 _refine.ls_wR_factor_R_work 0.1694 _refine.ls_R_factor_R_free 0.1977 _refine.ls_wR_factor_R_free 0.2509 _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 469 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 15.3019 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.2400 _refine.aniso_B[2][2] 0.2400 _refine.aniso_B[3][3] -0.4900 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9800 _refine.correlation_coeff_Fo_to_Fc_free 0.9560 _refine.overall_SU_R_Cruickshank_DPI 0.0745 _refine.overall_SU_R_free 0.0706 _refine.pdbx_overall_ESU_R_Free 0.0710 _refine.overall_SU_ML 0.0350 _refine.overall_SU_B 1.9470 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'PDB ENTRY 3UC7' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8821 _refine.B_iso_max 52.030 _refine.B_iso_min 6.140 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.200 _refine.pdbx_ls_sigma_I 0 _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R 0.075 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 453 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 102 _refine_hist.number_atoms_total 563 _refine_hist.d_res_high 1.330 _refine_hist.d_res_low 36.85 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 510 0.025 0.021 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 375 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 695 2.061 2.017 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 900 1.153 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 62 4.241 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 20 27.495 22.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 52 13.681 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 5 17.735 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 60 0.123 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 562 0.011 0.023 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 96 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 340 3.129 4.000 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 134 2.281 4.000 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 529 4.147 6.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 170 5.175 6.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 165 6.345 10.000 ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 885 2.579 3.000 ? ? 'X-RAY DIFFRACTION' r_sphericity_free 104 11.306 3.000 ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded 870 4.586 3.000 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.330 _refine_ls_shell.d_res_low 1.360 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 31.55 _refine_ls_shell.number_reflns_R_work 238 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.7880 _refine_ls_shell.R_factor_R_free 0.012 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 16 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 254 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3UC8 _struct.title 'Trp-cage cyclo-TC1 - tetragonal crystal form' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3UC8 _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' _struct_keywords.text 'miniprotein, Trp-cage, cyclic peptide, multimer, protein-protein interaction, DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3UC8 _struct_ref.pdbx_db_accession 3UC8 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code GDAYAQWLADGGPSSGRPPPSG _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3UC8 A 1 ? 22 ? 3UC8 -1 ? 21 ? -1 21 2 1 3UC8 B 1 ? 22 ? 3UC8 -1 ? 21 ? -1 21 3 1 3UC8 C 1 ? 22 ? 3UC8 -1 ? 21 ? -1 21 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 1 ? ASP A 10 ? GLY A -1 ASP A 9 1 ? 10 HELX_P HELX_P2 2 GLY A 11 ? GLY A 16 ? GLY A 10 GLY A 15 5 ? 6 HELX_P HELX_P3 3 ASP B 2 ? ASP B 10 ? ASP B 1 ASP B 9 1 ? 9 HELX_P HELX_P4 4 GLY B 11 ? GLY B 16 ? GLY B 10 GLY B 15 5 ? 6 HELX_P HELX_P5 5 ASP C 2 ? ASP C 10 ? ASP C 1 ASP C 9 1 ? 9 HELX_P HELX_P6 6 GLY C 11 ? GLY C 16 ? GLY C 10 GLY C 15 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 1 N ? ? ? 1_555 A GLY 22 C ? ? A GLY -1 A GLY 21 1_555 ? ? ? ? ? ? ? 1.472 ? ? covale2 covale both ? B GLY 1 N ? ? ? 1_555 B GLY 22 C ? ? B GLY -1 B GLY 21 1_555 ? ? ? ? ? ? ? 1.372 ? ? covale3 covale both ? C GLY 1 N ? ? ? 1_555 C GLY 22 C ? ? C GLY -1 C GLY 21 1_555 ? ? ? ? ? ? ? 1.353 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 GLY A 1 ? GLY A 22 ? GLY A -1 ? 1_555 GLY A 21 ? 1_555 N C . . . None 'Non-standard linkage' 2 GLY B 1 ? GLY B 22 ? GLY B -1 ? 1_555 GLY B 21 ? 1_555 N C . . . None 'Non-standard linkage' 3 GLY C 1 ? GLY C 22 ? GLY C -1 ? 1_555 GLY C 21 ? 1_555 N C . . . None 'Non-standard linkage' # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id C _struct_site.pdbx_auth_comp_id TRS _struct_site.pdbx_auth_seq_id 22 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 10 _struct_site.details 'BINDING SITE FOR RESIDUE TRS C 22' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 TYR A 4 ? TYR A 3 . ? 1_555 ? 2 AC1 10 HOH E . ? HOH A 1034 . ? 1_555 ? 3 AC1 10 TYR B 4 ? TYR B 3 . ? 1_555 ? 4 AC1 10 PRO B 20 ? PRO B 19 . ? 1_555 ? 5 AC1 10 SER B 21 ? SER B 20 . ? 1_555 ? 6 AC1 10 TYR C 4 ? TYR C 3 . ? 1_555 ? 7 AC1 10 HOH G . ? HOH C 1060 . ? 1_555 ? 8 AC1 10 HOH G . ? HOH C 1061 . ? 1_555 ? 9 AC1 10 HOH G . ? HOH C 1062 . ? 1_555 ? 10 AC1 10 HOH G . ? HOH C 1099 . ? 1_555 ? # _pdbx_entry_details.entry_id 3UC8 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 C _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 1046 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 C _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 1047 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.00 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 C _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 1048 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 C _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 1048 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 6_545 _pdbx_validate_symm_contact.dist 1.22 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 16 ? ? CZ A ARG 16 ? ? NH2 A ARG 16 ? ? 123.36 120.30 3.06 0.50 N 2 1 NE B ARG 16 ? B CZ B ARG 16 ? B NH1 B ARG 16 ? B 116.65 120.30 -3.65 0.50 N 3 1 NE C ARG 16 ? A CZ C ARG 16 ? A NH2 C ARG 16 ? A 116.12 120.30 -4.18 0.50 N # _phasing.method MR # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASP N N N N 41 ASP CA C N S 42 ASP C C N N 43 ASP O O N N 44 ASP CB C N N 45 ASP CG C N N 46 ASP OD1 O N N 47 ASP OD2 O N N 48 ASP OXT O N N 49 ASP H H N N 50 ASP H2 H N N 51 ASP HA H N N 52 ASP HB2 H N N 53 ASP HB3 H N N 54 ASP HD2 H N N 55 ASP HXT H N N 56 GLN N N N N 57 GLN CA C N S 58 GLN C C N N 59 GLN O O N N 60 GLN CB C N N 61 GLN CG C N N 62 GLN CD C N N 63 GLN OE1 O N N 64 GLN NE2 N N N 65 GLN OXT O N N 66 GLN H H N N 67 GLN H2 H N N 68 GLN HA H N N 69 GLN HB2 H N N 70 GLN HB3 H N N 71 GLN HG2 H N N 72 GLN HG3 H N N 73 GLN HE21 H N N 74 GLN HE22 H N N 75 GLN HXT H N N 76 GLY N N N N 77 GLY CA C N N 78 GLY C C N N 79 GLY O O N N 80 GLY OXT O N N 81 GLY H H N N 82 GLY H2 H N N 83 GLY HA2 H N N 84 GLY HA3 H N N 85 GLY HXT H N N 86 HOH O O N N 87 HOH H1 H N N 88 HOH H2 H N N 89 LEU N N N N 90 LEU CA C N S 91 LEU C C N N 92 LEU O O N N 93 LEU CB C N N 94 LEU CG C N N 95 LEU CD1 C N N 96 LEU CD2 C N N 97 LEU OXT O N N 98 LEU H H N N 99 LEU H2 H N N 100 LEU HA H N N 101 LEU HB2 H N N 102 LEU HB3 H N N 103 LEU HG H N N 104 LEU HD11 H N N 105 LEU HD12 H N N 106 LEU HD13 H N N 107 LEU HD21 H N N 108 LEU HD22 H N N 109 LEU HD23 H N N 110 LEU HXT H N N 111 PRO N N N N 112 PRO CA C N S 113 PRO C C N N 114 PRO O O N N 115 PRO CB C N N 116 PRO CG C N N 117 PRO CD C N N 118 PRO OXT O N N 119 PRO H H N N 120 PRO HA H N N 121 PRO HB2 H N N 122 PRO HB3 H N N 123 PRO HG2 H N N 124 PRO HG3 H N N 125 PRO HD2 H N N 126 PRO HD3 H N N 127 PRO HXT H N N 128 SER N N N N 129 SER CA C N S 130 SER C C N N 131 SER O O N N 132 SER CB C N N 133 SER OG O N N 134 SER OXT O N N 135 SER H H N N 136 SER H2 H N N 137 SER HA H N N 138 SER HB2 H N N 139 SER HB3 H N N 140 SER HG H N N 141 SER HXT H N N 142 TRP N N N N 143 TRP CA C N S 144 TRP C C N N 145 TRP O O N N 146 TRP CB C N N 147 TRP CG C Y N 148 TRP CD1 C Y N 149 TRP CD2 C Y N 150 TRP NE1 N Y N 151 TRP CE2 C Y N 152 TRP CE3 C Y N 153 TRP CZ2 C Y N 154 TRP CZ3 C Y N 155 TRP CH2 C Y N 156 TRP OXT O N N 157 TRP H H N N 158 TRP H2 H N N 159 TRP HA H N N 160 TRP HB2 H N N 161 TRP HB3 H N N 162 TRP HD1 H N N 163 TRP HE1 H N N 164 TRP HE3 H N N 165 TRP HZ2 H N N 166 TRP HZ3 H N N 167 TRP HH2 H N N 168 TRP HXT H N N 169 TRS C C N N 170 TRS C1 C N N 171 TRS C2 C N N 172 TRS C3 C N N 173 TRS N N N N 174 TRS O1 O N N 175 TRS O2 O N N 176 TRS O3 O N N 177 TRS H11 H N N 178 TRS H12 H N N 179 TRS H21 H N N 180 TRS H22 H N N 181 TRS H31 H N N 182 TRS H32 H N N 183 TRS HN1 H N N 184 TRS HN2 H N N 185 TRS HN3 H N N 186 TRS HO1 H N N 187 TRS HO2 H N N 188 TRS HO3 H N N 189 TYR N N N N 190 TYR CA C N S 191 TYR C C N N 192 TYR O O N N 193 TYR CB C N N 194 TYR CG C Y N 195 TYR CD1 C Y N 196 TYR CD2 C Y N 197 TYR CE1 C Y N 198 TYR CE2 C Y N 199 TYR CZ C Y N 200 TYR OH O N N 201 TYR OXT O N N 202 TYR H H N N 203 TYR H2 H N N 204 TYR HA H N N 205 TYR HB2 H N N 206 TYR HB3 H N N 207 TYR HD1 H N N 208 TYR HD2 H N N 209 TYR HE1 H N N 210 TYR HE2 H N N 211 TYR HH H N N 212 TYR HXT H N N 213 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASP N CA sing N N 39 ASP N H sing N N 40 ASP N H2 sing N N 41 ASP CA C sing N N 42 ASP CA CB sing N N 43 ASP CA HA sing N N 44 ASP C O doub N N 45 ASP C OXT sing N N 46 ASP CB CG sing N N 47 ASP CB HB2 sing N N 48 ASP CB HB3 sing N N 49 ASP CG OD1 doub N N 50 ASP CG OD2 sing N N 51 ASP OD2 HD2 sing N N 52 ASP OXT HXT sing N N 53 GLN N CA sing N N 54 GLN N H sing N N 55 GLN N H2 sing N N 56 GLN CA C sing N N 57 GLN CA CB sing N N 58 GLN CA HA sing N N 59 GLN C O doub N N 60 GLN C OXT sing N N 61 GLN CB CG sing N N 62 GLN CB HB2 sing N N 63 GLN CB HB3 sing N N 64 GLN CG CD sing N N 65 GLN CG HG2 sing N N 66 GLN CG HG3 sing N N 67 GLN CD OE1 doub N N 68 GLN CD NE2 sing N N 69 GLN NE2 HE21 sing N N 70 GLN NE2 HE22 sing N N 71 GLN OXT HXT sing N N 72 GLY N CA sing N N 73 GLY N H sing N N 74 GLY N H2 sing N N 75 GLY CA C sing N N 76 GLY CA HA2 sing N N 77 GLY CA HA3 sing N N 78 GLY C O doub N N 79 GLY C OXT sing N N 80 GLY OXT HXT sing N N 81 HOH O H1 sing N N 82 HOH O H2 sing N N 83 LEU N CA sing N N 84 LEU N H sing N N 85 LEU N H2 sing N N 86 LEU CA C sing N N 87 LEU CA CB sing N N 88 LEU CA HA sing N N 89 LEU C O doub N N 90 LEU C OXT sing N N 91 LEU CB CG sing N N 92 LEU CB HB2 sing N N 93 LEU CB HB3 sing N N 94 LEU CG CD1 sing N N 95 LEU CG CD2 sing N N 96 LEU CG HG sing N N 97 LEU CD1 HD11 sing N N 98 LEU CD1 HD12 sing N N 99 LEU CD1 HD13 sing N N 100 LEU CD2 HD21 sing N N 101 LEU CD2 HD22 sing N N 102 LEU CD2 HD23 sing N N 103 LEU OXT HXT sing N N 104 PRO N CA sing N N 105 PRO N CD sing N N 106 PRO N H sing N N 107 PRO CA C sing N N 108 PRO CA CB sing N N 109 PRO CA HA sing N N 110 PRO C O doub N N 111 PRO C OXT sing N N 112 PRO CB CG sing N N 113 PRO CB HB2 sing N N 114 PRO CB HB3 sing N N 115 PRO CG CD sing N N 116 PRO CG HG2 sing N N 117 PRO CG HG3 sing N N 118 PRO CD HD2 sing N N 119 PRO CD HD3 sing N N 120 PRO OXT HXT sing N N 121 SER N CA sing N N 122 SER N H sing N N 123 SER N H2 sing N N 124 SER CA C sing N N 125 SER CA CB sing N N 126 SER CA HA sing N N 127 SER C O doub N N 128 SER C OXT sing N N 129 SER CB OG sing N N 130 SER CB HB2 sing N N 131 SER CB HB3 sing N N 132 SER OG HG sing N N 133 SER OXT HXT sing N N 134 TRP N CA sing N N 135 TRP N H sing N N 136 TRP N H2 sing N N 137 TRP CA C sing N N 138 TRP CA CB sing N N 139 TRP CA HA sing N N 140 TRP C O doub N N 141 TRP C OXT sing N N 142 TRP CB CG sing N N 143 TRP CB HB2 sing N N 144 TRP CB HB3 sing N N 145 TRP CG CD1 doub Y N 146 TRP CG CD2 sing Y N 147 TRP CD1 NE1 sing Y N 148 TRP CD1 HD1 sing N N 149 TRP CD2 CE2 doub Y N 150 TRP CD2 CE3 sing Y N 151 TRP NE1 CE2 sing Y N 152 TRP NE1 HE1 sing N N 153 TRP CE2 CZ2 sing Y N 154 TRP CE3 CZ3 doub Y N 155 TRP CE3 HE3 sing N N 156 TRP CZ2 CH2 doub Y N 157 TRP CZ2 HZ2 sing N N 158 TRP CZ3 CH2 sing Y N 159 TRP CZ3 HZ3 sing N N 160 TRP CH2 HH2 sing N N 161 TRP OXT HXT sing N N 162 TRS C C1 sing N N 163 TRS C C2 sing N N 164 TRS C C3 sing N N 165 TRS C N sing N N 166 TRS C1 O1 sing N N 167 TRS C1 H11 sing N N 168 TRS C1 H12 sing N N 169 TRS C2 O2 sing N N 170 TRS C2 H21 sing N N 171 TRS C2 H22 sing N N 172 TRS C3 O3 sing N N 173 TRS C3 H31 sing N N 174 TRS C3 H32 sing N N 175 TRS N HN1 sing N N 176 TRS N HN2 sing N N 177 TRS N HN3 sing N N 178 TRS O1 HO1 sing N N 179 TRS O2 HO2 sing N N 180 TRS O3 HO3 sing N N 181 TYR N CA sing N N 182 TYR N H sing N N 183 TYR N H2 sing N N 184 TYR CA C sing N N 185 TYR CA CB sing N N 186 TYR CA HA sing N N 187 TYR C O doub N N 188 TYR C OXT sing N N 189 TYR CB CG sing N N 190 TYR CB HB2 sing N N 191 TYR CB HB3 sing N N 192 TYR CG CD1 doub Y N 193 TYR CG CD2 sing Y N 194 TYR CD1 CE1 sing Y N 195 TYR CD1 HD1 sing N N 196 TYR CD2 CE2 doub Y N 197 TYR CD2 HD2 sing N N 198 TYR CE1 CZ doub Y N 199 TYR CE1 HE1 sing N N 200 TYR CE2 CZ sing Y N 201 TYR CE2 HE2 sing N N 202 TYR CZ OH sing N N 203 TYR OH HH sing N N 204 TYR OXT HXT sing N N 205 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3UC7 _pdbx_initial_refinement_model.details 'PDB ENTRY 3UC7' # _atom_sites.entry_id 3UC8 _atom_sites.fract_transf_matrix[1][1] 0.027139 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.027139 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015103 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O # loop_