HEADER OXIDOREDUCTASE 27-OCT-11 3UCL TITLE CYCLOHEXANONE-BOUND CRYSTAL STRUCTURE OF CYCLOHEXANONE MONOOXYGENASE TITLE 2 IN THE ROTATED CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLOHEXANONE MONOOXYGENASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.14.13.22; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOCOCCUS SP. HI-31; SOURCE 3 ORGANISM_TAXID: 638919; SOURCE 4 GENE: CHNB, CHNB1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PJW234 KEYWDS BAEYER-VILLIGER MONOOXYGENASE, BAEYER-VILLIGER OXIDATION, KEYWDS 2 BIOCATALYSIS, FLAVOPROTEIN, GREEN CHEMISTRY, PROTEIN ENGINEERING, KEYWDS 3 ROSSMANN FOLD, OXIDOREDUCTASE, FAD, NADPH, CYCLOHEXANONE, OXYGEN, KEYWDS 4 CYTOSOLIC (BACTERIAL) EXPDTA X-RAY DIFFRACTION AUTHOR B.J.YACHNIN,A.M.BERGHUIS REVDAT 4 13-SEP-23 3UCL 1 REMARK SEQADV REVDAT 3 08-NOV-17 3UCL 1 REMARK REVDAT 2 23-MAY-12 3UCL 1 JRNL REVDAT 1 25-APR-12 3UCL 0 JRNL AUTH B.J.YACHNIN,T.SPRULES,M.B.MCEVOY,P.C.LAU,A.M.BERGHUIS JRNL TITL THE SUBSTRATE-BOUND CRYSTAL STRUCTURE OF A BAEYER-VILLIGER JRNL TITL 2 MONOOXYGENASE EXHIBITS A CRIEGEE-LIKE CONFORMATION. JRNL REF J.AM.CHEM.SOC. V. 134 7788 2012 JRNL REFN ISSN 0002-7863 JRNL PMID 22506764 JRNL DOI 10.1021/JA211876P REMARK 2 REMARK 2 RESOLUTION. 2.36 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.36 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.61 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 20214 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.200 REMARK 3 FREE R VALUE TEST SET COUNT : 2061 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.36 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.43 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1144 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.97 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE SET COUNT : 134 REMARK 3 BIN FREE R VALUE : 0.3560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3986 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 108 REMARK 3 SOLVENT ATOMS : 121 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.53000 REMARK 3 B22 (A**2) : -0.57000 REMARK 3 B33 (A**2) : 1.10000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.315 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.213 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.967 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.903 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4206 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5755 ; 1.669 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 508 ; 7.134 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 203 ;36.684 ;23.793 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 600 ;17.296 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;18.159 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 628 ; 0.114 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3286 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2531 ; 0.771 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4073 ; 1.457 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1675 ; 2.303 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1682 ; 3.779 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3UCL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-NOV-11. REMARK 100 THE DEPOSITION ID IS D_1000068584. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-AUG-09 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : ROTATING COPPER ANODE REMARK 200 OPTICS : VARIMAX HF REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20262 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.360 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 11.20 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : 0.08700 REMARK 200 FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.36 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.47 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.7 REMARK 200 DATA REDUNDANCY IN SHELL : 8.30 REMARK 200 R MERGE FOR SHELL (I) : 0.47200 REMARK 200 R SYM FOR SHELL (I) : 0.47200 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: PDB ENTRY 3GWF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M IMIDAZOLE, 0.2% TMOS, 20% PEG REMARK 280 3350, 0.1 M CYCLOHEXANONE, PH 8.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.76900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.70450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.55250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.70450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.76900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.55250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -32 REMARK 465 GLY A -31 REMARK 465 SER A -30 REMARK 465 SER A -29 REMARK 465 HIS A -28 REMARK 465 HIS A -27 REMARK 465 HIS A -26 REMARK 465 HIS A -25 REMARK 465 HIS A -24 REMARK 465 HIS A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 ASP A -20 REMARK 465 TYR A -19 REMARK 465 ASP A -18 REMARK 465 ILE A -17 REMARK 465 PRO A -16 REMARK 465 THR A -15 REMARK 465 THR A -14 REMARK 465 GLU A -13 REMARK 465 ASN A -12 REMARK 465 LEU A -11 REMARK 465 TYR A -10 REMARK 465 PHE A -9 REMARK 465 GLN A -8 REMARK 465 GLY A -7 REMARK 465 SER A -6 REMARK 465 LEU A -5 REMARK 465 GLU A -4 REMARK 465 ALA A -3 REMARK 465 SER A -2 REMARK 465 MET A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ALA A 3 REMARK 465 GLN A 4 REMARK 465 LEU A 146 REMARK 465 SER A 147 REMARK 465 ALA A 148 REMARK 465 ILE A 149 REMARK 465 GLY A 489 REMARK 465 ASP A 490 REMARK 465 SER A 491 REMARK 465 TRP A 492 REMARK 465 ILE A 493 REMARK 465 PHE A 494 REMARK 465 GLY A 495 REMARK 465 ALA A 496 REMARK 465 ASN A 497 REMARK 465 ILE A 498 REMARK 465 PRO A 499 REMARK 465 GLY A 500 REMARK 465 LYS A 501 REMARK 465 LYS A 502 REMARK 465 PRO A 503 REMARK 465 ALA A 535 REMARK 465 GLU A 536 REMARK 465 MET A 537 REMARK 465 VAL A 538 REMARK 465 THR A 539 REMARK 465 VAL A 540 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 40 CG CD CE NZ REMARK 470 ARG A 71 NE CZ NH1 NH2 REMARK 470 LYS A 137 CE NZ REMARK 470 GLN A 226 CG CD OE1 NE2 REMARK 470 LYS A 323 CD CE NZ REMARK 470 LYS A 328 CG CD CE NZ REMARK 470 PHE A 382 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 383 CG OD1 OD2 REMARK 470 ARG A 391 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 488 CG CD CE NZ REMARK 470 LYS A 533 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 142 58.49 -112.98 REMARK 500 PRO A 152 113.33 -30.19 REMARK 500 ASN A 153 95.26 -55.66 REMARK 500 ALA A 169 48.91 -142.34 REMARK 500 ARG A 209 -61.01 -90.70 REMARK 500 PRO A 224 -71.88 -11.99 REMARK 500 ALA A 327 48.26 -152.28 REMARK 500 SER A 334 53.43 -106.49 REMARK 500 ALA A 379 44.59 -101.96 REMARK 500 ALA A 384 168.17 64.24 REMARK 500 ASN A 420 -8.61 79.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 225 GLN A 226 149.04 REMARK 500 GLN A 226 ILE A 227 147.35 REMARK 500 PHE A 434 THR A 435 -149.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 541 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP A 542 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CYH A 543 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3GWF RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN THE OPEN CONFORMATION WITH BOUND NADP+ AND FAD REMARK 900 RELATED ID: 3GWD RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN THE CLOSED CONFORMATION WITH BOUND NADP+ AND FAD DBREF 3UCL A 1 540 UNP C0STX7 C0STX7_9NOCA 1 540 SEQADV 3UCL MET A -32 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL GLY A -31 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL SER A -30 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL SER A -29 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL HIS A -28 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL HIS A -27 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL HIS A -26 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL HIS A -25 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL HIS A -24 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL HIS A -23 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL HIS A -22 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL HIS A -21 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL ASP A -20 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL TYR A -19 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL ASP A -18 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL ILE A -17 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL PRO A -16 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL THR A -15 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL THR A -14 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL GLU A -13 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL ASN A -12 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL LEU A -11 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL TYR A -10 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL PHE A -9 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL GLN A -8 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL GLY A -7 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL SER A -6 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL LEU A -5 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL GLU A -4 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL ALA A -3 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL SER A -2 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL MET A -1 UNP C0STX7 EXPRESSION TAG SEQADV 3UCL HIS A 0 UNP C0STX7 EXPRESSION TAG SEQRES 1 A 573 MET GLY SER SER HIS HIS HIS HIS HIS HIS HIS HIS ASP SEQRES 2 A 573 TYR ASP ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY SEQRES 3 A 573 SER LEU GLU ALA SER MET HIS MET THR ALA GLN THR THR SEQRES 4 A 573 HIS THR VAL ASP ALA VAL VAL ILE GLY ALA GLY PHE GLY SEQRES 5 A 573 GLY ILE TYR ALA VAL HIS LYS LEU HIS HIS GLU LEU GLY SEQRES 6 A 573 LEU THR THR VAL GLY PHE ASP LYS ALA ASP GLY PRO GLY SEQRES 7 A 573 GLY THR TRP TYR TRP ASN ARG TYR PRO GLY ALA LEU SER SEQRES 8 A 573 ASP THR GLU SER HIS LEU TYR ARG PHE SER PHE ASP ARG SEQRES 9 A 573 ASP LEU LEU GLN GLU SER THR TRP LYS THR THR TYR ILE SEQRES 10 A 573 THR GLN PRO GLU ILE LEU GLU TYR LEU GLU ASP VAL VAL SEQRES 11 A 573 ASP ARG PHE ASP LEU ARG ARG HIS PHE LYS PHE GLY THR SEQRES 12 A 573 GLU VAL THR SER ALA LEU TYR LEU ASP ASP GLU ASN LEU SEQRES 13 A 573 TRP GLU VAL THR THR ASP HIS GLY GLU VAL TYR ARG ALA SEQRES 14 A 573 LYS TYR VAL VAL ASN ALA VAL GLY LEU LEU SER ALA ILE SEQRES 15 A 573 ASN PHE PRO ASN LEU PRO GLY LEU ASP THR PHE GLU GLY SEQRES 16 A 573 GLU THR ILE HIS THR ALA ALA TRP PRO GLU GLY LYS SER SEQRES 17 A 573 LEU ALA GLY ARG ARG VAL GLY VAL ILE GLY THR GLY SER SEQRES 18 A 573 THR GLY GLN GLN VAL ILE THR SER LEU ALA PRO GLU VAL SEQRES 19 A 573 GLU HIS LEU THR VAL PHE VAL ARG THR PRO GLN TYR SER SEQRES 20 A 573 VAL PRO VAL GLY ASN ARG PRO VAL ASN PRO GLU GLN ILE SEQRES 21 A 573 ALA GLU ILE LYS ALA ASP TYR ASP ARG ILE TRP GLU ARG SEQRES 22 A 573 ALA LYS ASN SER ALA VAL ALA PHE GLY PHE GLU GLU SER SEQRES 23 A 573 THR LEU PRO ALA MET SER VAL SER GLU GLU GLU ARG ASN SEQRES 24 A 573 ARG ILE PHE GLN GLU ALA TRP ASP HIS GLY GLY GLY PHE SEQRES 25 A 573 ARG PHE MET PHE GLY THR PHE GLY ASP ILE ALA THR ASP SEQRES 26 A 573 GLU ALA ALA ASN GLU ALA ALA ALA SER PHE ILE ARG ALA SEQRES 27 A 573 LYS VAL ALA GLU ILE ILE GLU ASP PRO GLU THR ALA ARG SEQRES 28 A 573 LYS LEU MET PRO LYS GLY LEU PHE ALA LYS ARG PRO LEU SEQRES 29 A 573 CYS ASP SER GLY TYR TYR GLU VAL TYR ASN ARG PRO ASN SEQRES 30 A 573 VAL GLU ALA VAL ALA ILE LYS GLU ASN PRO ILE ARG GLU SEQRES 31 A 573 VAL THR ALA LYS GLY VAL VAL THR GLU ASP GLY VAL LEU SEQRES 32 A 573 HIS GLU LEU ASP VAL LEU VAL PHE ALA THR GLY PHE ASP SEQRES 33 A 573 ALA VAL ASP GLY ASN TYR ARG ARG ILE GLU ILE ARG GLY SEQRES 34 A 573 ARG ASP GLY LEU HIS ILE ASN ASP HIS TRP ASP GLY GLN SEQRES 35 A 573 PRO THR SER TYR LEU GLY VAL SER THR ALA ASN PHE PRO SEQRES 36 A 573 ASN TRP PHE MET VAL LEU GLY PRO ASN GLY PRO PHE THR SEQRES 37 A 573 ASN LEU PRO PRO SER ILE GLU THR GLN VAL GLU TRP ILE SEQRES 38 A 573 SER ASP THR ILE GLY TYR ALA GLU ARG ASN GLY VAL ARG SEQRES 39 A 573 ALA ILE GLU PRO THR PRO GLU ALA GLU ALA GLU TRP THR SEQRES 40 A 573 GLU THR CYS THR GLU ILE ALA ASN ALA THR LEU PHE THR SEQRES 41 A 573 LYS GLY ASP SER TRP ILE PHE GLY ALA ASN ILE PRO GLY SEQRES 42 A 573 LYS LYS PRO SER VAL LEU PHE TYR LEU GLY GLY LEU ARG SEQRES 43 A 573 ASN TYR ARG ALA VAL MET ALA GLU VAL ALA ALA ASP GLY SEQRES 44 A 573 TYR ARG GLY PHE GLU VAL LYS SER ALA GLU MET VAL THR SEQRES 45 A 573 VAL HET FAD A 541 53 HET NAP A 542 48 HET CYH A 543 7 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM CYH CYCLOHEXANONE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 NAP C21 H28 N7 O17 P3 FORMUL 4 CYH C6 H10 O FORMUL 5 HOH *121(H2 O) HELIX 1 1 GLY A 17 GLU A 30 1 14 HELIX 2 2 GLY A 46 ASN A 51 1 6 HELIX 3 3 GLU A 61 TYR A 65 5 5 HELIX 4 4 ASP A 70 SER A 77 1 8 HELIX 5 5 THR A 85 PHE A 100 1 16 HELIX 6 6 LEU A 102 ARG A 104 5 3 HELIX 7 7 GLY A 156 PHE A 160 5 5 HELIX 8 8 ALA A 168 TRP A 170 5 3 HELIX 9 9 GLY A 187 ALA A 198 1 12 HELIX 10 10 GLN A 226 ASP A 233 1 8 HELIX 11 11 ASP A 233 ASN A 243 1 11 HELIX 12 12 PRO A 256 VAL A 260 5 5 HELIX 13 13 SER A 261 GLY A 276 1 16 HELIX 14 14 GLY A 277 GLY A 284 1 8 HELIX 15 15 ASP A 292 ILE A 311 1 20 HELIX 16 16 ASP A 313 MET A 321 1 9 HELIX 17 17 TYR A 337 ARG A 342 5 6 HELIX 18 18 ASP A 386 ARG A 391 1 6 HELIX 19 19 GLY A 396 LEU A 400 5 5 HELIX 20 20 HIS A 401 TRP A 406 1 6 HELIX 21 21 ASN A 436 ASN A 458 1 23 HELIX 22 22 THR A 466 THR A 484 1 19 HELIX 23 23 GLY A 511 ASP A 525 1 15 SHEET 1 A 7 PHE A 106 LYS A 107 0 SHEET 2 A 7 THR A 35 PHE A 38 1 N GLY A 37 O LYS A 107 SHEET 3 A 7 THR A 6 ILE A 14 1 N VAL A 13 O VAL A 36 SHEET 4 A 7 VAL A 133 ASN A 141 1 O VAL A 133 N HIS A 7 SHEET 5 A 7 TRP A 124 THR A 128 -1 N VAL A 126 O TYR A 134 SHEET 6 A 7 VAL A 112 TYR A 117 -1 N LEU A 116 O GLU A 125 SHEET 7 A 7 GLU A 393 ARG A 395 1 O GLU A 393 N ALA A 115 SHEET 1 B 5 PHE A 106 LYS A 107 0 SHEET 2 B 5 THR A 35 PHE A 38 1 N GLY A 37 O LYS A 107 SHEET 3 B 5 THR A 6 ILE A 14 1 N VAL A 13 O VAL A 36 SHEET 4 B 5 VAL A 133 ASN A 141 1 O VAL A 133 N HIS A 7 SHEET 5 B 5 TRP A 424 MET A 426 1 O PHE A 425 N VAL A 139 SHEET 1 C 5 GLU A 163 HIS A 166 0 SHEET 2 C 5 VAL A 375 PHE A 378 1 O LEU A 376 N GLU A 163 SHEET 3 C 5 ARG A 180 ILE A 184 1 N GLY A 182 O VAL A 377 SHEET 4 C 5 HIS A 203 VAL A 208 1 O PHE A 207 N VAL A 183 SHEET 5 C 5 VAL A 345 ALA A 349 1 O VAL A 348 N VAL A 206 SHEET 1 D 2 SER A 214 PRO A 216 0 SHEET 2 D 2 LEU A 331 ASP A 333 1 O LEU A 331 N VAL A 215 SHEET 1 E 3 ILE A 355 THR A 359 0 SHEET 2 E 3 GLY A 362 THR A 365 -1 O GLY A 362 N THR A 359 SHEET 3 E 3 LEU A 370 GLU A 372 -1 O HIS A 371 N VAL A 363 SHEET 1 F 2 ALA A 462 PRO A 465 0 SHEET 2 F 2 PHE A 530 LYS A 533 -1 O GLU A 531 N GLU A 464 SITE 1 AC1 32 ILE A 14 GLY A 15 GLY A 17 PHE A 18 SITE 2 AC1 32 GLY A 19 ASP A 39 LYS A 40 GLY A 46 SITE 3 AC1 32 THR A 47 TRP A 48 TRP A 50 TYR A 53 SITE 4 AC1 32 SER A 58 ASP A 59 THR A 60 TYR A 65 SITE 5 AC1 32 GLU A 111 VAL A 112 ALA A 142 VAL A 143 SITE 6 AC1 32 GLY A 144 ARG A 329 ILE A 392 LEU A 428 SITE 7 AC1 32 ASN A 436 LEU A 437 CYH A 543 HOH A 554 SITE 8 AC1 32 HOH A 561 HOH A 611 HOH A 612 HOH A 613 SITE 1 AC2 17 LEU A 145 PRO A 152 ILE A 184 GLY A 185 SITE 2 AC2 17 THR A 186 GLY A 187 SER A 188 THR A 189 SITE 3 AC2 17 ARG A 209 THR A 210 ILE A 350 ALA A 379 SITE 4 AC2 17 THR A 380 GLY A 381 PHE A 507 CYH A 543 SITE 5 AC2 17 HOH A 616 SITE 1 AC3 6 ASP A 59 SER A 188 ARG A 329 FAD A 541 SITE 2 AC3 6 NAP A 542 HOH A 601 CRYST1 55.538 67.105 131.409 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018006 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014902 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007610 0.00000