HEADER HORMONE 27-OCT-11 3UD8 TITLE CRYSTAL STRUCTURE ANALYSIS OF FGF1-DISACCHARIDE(NI22) COMPLEX CAVEAT 3UD8 IDY D 1 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEPARIN-BINDING GROWTH FACTOR 1; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: HBGF-1, ACIDIC FIBROBLAST GROWTH FACTOR, AFGF, BETA- COMPND 5 ENDOTHELIAL CELL GROWTH FACTOR, ECGF-BETA; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FGF1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21B KEYWDS HEPARIN/HEPARAN SULFATE BINDING, HORMONE EXPDTA X-RAY DIFFRACTION AUTHOR S.-C.HUNG,Z.SHI REVDAT 4 01-NOV-23 3UD8 1 HETSYN REVDAT 3 29-JUL-20 3UD8 1 CAVEAT COMPND REMARK SEQADV REVDAT 3 2 1 HETNAM LINK SITE ATOM REVDAT 2 16-JAN-13 3UD8 1 JRNL REVDAT 1 28-NOV-12 3UD8 0 JRNL AUTH Y.-P.HU,Y.-Q.ZHONG,Z.-G.CHEN,C.-Y.CHEN,Z.SHI,M.M.L.ZULUETA, JRNL AUTH 2 C.-C.KU,P.-Y.LEE,C.-C.WANG,S.-C.HUNG JRNL TITL DIVERGENT SYNTHESIS OF 48 HEPARAN SULFATE-BASED JRNL TITL 2 DISACCHARIDES AND PROBING THE SPECIFIC SUGAR-FIBROBLAST JRNL TITL 3 GROWTH FACTOR-1 INTERACTION JRNL REF J.AM.CHEM.SOC. V. 134 20722 2012 JRNL REFN ISSN 0002-7863 JRNL PMID 23240683 JRNL DOI 10.1021/JA3090065 REMARK 2 REMARK 2 RESOLUTION. 2.37 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.37 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 78.43 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 14298 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1610 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.37 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.44 REMARK 3 REFLECTION IN BIN (WORKING SET) : 860 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 77.86 REMARK 3 BIN R VALUE (WORKING SET) : 0.2330 REMARK 3 BIN FREE R VALUE SET COUNT : 100 REMARK 3 BIN FREE R VALUE : 0.3680 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3080 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 47 REMARK 3 SOLVENT ATOMS : 52 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.90000 REMARK 3 B22 (A**2) : 3.39000 REMARK 3 B33 (A**2) : -2.79000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.96000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.318 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.216 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 20.159 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.900 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3194 ; 0.013 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4308 ; 1.680 ; 1.984 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 383 ; 7.928 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 149 ;39.909 ;24.161 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 563 ;18.136 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;18.697 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 461 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2390 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1912 ; 1.018 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3072 ; 1.906 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1282 ; 2.617 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1236 ; 4.164 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 9 A 137 REMARK 3 ORIGIN FOR THE GROUP (A): 18.8739 -23.0649 -21.3427 REMARK 3 T TENSOR REMARK 3 T11: 0.0024 T22: 0.0069 REMARK 3 T33: 0.0051 T12: 0.0006 REMARK 3 T13: -0.0014 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 2.5394 L22: 1.2348 REMARK 3 L33: 0.8591 L12: -0.5509 REMARK 3 L13: -0.1073 L23: 0.2374 REMARK 3 S TENSOR REMARK 3 S11: 0.0588 S12: 0.0940 S13: 0.0280 REMARK 3 S21: 0.0207 S22: -0.0762 S23: -0.0700 REMARK 3 S31: -0.0004 S32: -0.0365 S33: 0.0174 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 10 B 137 REMARK 3 ORIGIN FOR THE GROUP (A): 5.5930 -18.9645 -48.3396 REMARK 3 T TENSOR REMARK 3 T11: 0.0070 T22: 0.0071 REMARK 3 T33: 0.0108 T12: 0.0036 REMARK 3 T13: -0.0004 T23: 0.0001 REMARK 3 L TENSOR REMARK 3 L11: 1.1878 L22: 2.5340 REMARK 3 L33: 1.7021 L12: -0.2236 REMARK 3 L13: -0.3243 L23: 0.0888 REMARK 3 S TENSOR REMARK 3 S11: 0.0250 S12: 0.0776 S13: -0.0343 REMARK 3 S21: 0.0122 S22: -0.0533 S23: -0.1451 REMARK 3 S31: -0.0199 S32: -0.0570 S33: 0.0283 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 10 C 138 REMARK 3 ORIGIN FOR THE GROUP (A): 41.7352 -36.1036 -8.3362 REMARK 3 T TENSOR REMARK 3 T11: 0.0025 T22: 0.0197 REMARK 3 T33: 0.0090 T12: 0.0054 REMARK 3 T13: 0.0003 T23: 0.0074 REMARK 3 L TENSOR REMARK 3 L11: 1.5075 L22: 0.8729 REMARK 3 L33: 2.0216 L12: -0.0885 REMARK 3 L13: 0.1065 L23: -0.4828 REMARK 3 S TENSOR REMARK 3 S11: 0.0283 S12: 0.0129 S13: -0.0363 REMARK 3 S21: -0.0255 S22: -0.0193 S23: 0.0560 REMARK 3 S31: 0.0284 S32: 0.1190 S33: -0.0090 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 141 C 141 REMARK 3 RESIDUE RANGE : B 141 B 141 REMARK 3 ORIGIN FOR THE GROUP (A): 29.3657 -36.9614 -28.7358 REMARK 3 T TENSOR REMARK 3 T11: 0.0671 T22: 0.0549 REMARK 3 T33: 0.0774 T12: -0.0321 REMARK 3 T13: 0.0531 T23: -0.0292 REMARK 3 L TENSOR REMARK 3 L11: 112.0762 L22: 133.3726 REMARK 3 L33: 129.7924 L12:-120.9369 REMARK 3 L13: 119.4926 L23:-130.2268 REMARK 3 S TENSOR REMARK 3 S11: -0.2484 S12: -0.6432 S13: -0.0632 REMARK 3 S21: 0.1890 S22: 0.4246 S23: 0.0234 REMARK 3 S31: -0.0990 S32: -0.6421 S33: -0.1763 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 143 A 166 REMARK 3 RESIDUE RANGE : C 142 C 157 REMARK 3 RESIDUE RANGE : B 142 B 153 REMARK 3 ORIGIN FOR THE GROUP (A): 22.9289 -26.1655 -22.5830 REMARK 3 T TENSOR REMARK 3 T11: 0.0878 T22: 0.0334 REMARK 3 T33: 0.0654 T12: -0.0187 REMARK 3 T13: -0.0287 T23: 0.0126 REMARK 3 L TENSOR REMARK 3 L11: 0.1296 L22: 0.0145 REMARK 3 L33: 0.2203 L12: -0.0132 REMARK 3 L13: -0.0403 L23: 0.0532 REMARK 3 S TENSOR REMARK 3 S11: -0.0049 S12: -0.0520 S13: 0.0323 REMARK 3 S21: -0.0091 S22: 0.0107 S23: 0.0046 REMARK 3 S31: 0.0068 S32: 0.0220 S33: -0.0057 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 141 A 142 REMARK 3 ORIGIN FOR THE GROUP (A): 27.6115 -7.4951 -20.8284 REMARK 3 T TENSOR REMARK 3 T11: 0.2257 T22: 0.2485 REMARK 3 T33: 0.3895 T12: -0.1023 REMARK 3 T13: 0.1081 T23: 0.1465 REMARK 3 L TENSOR REMARK 3 L11: 4.9135 L22: 26.8291 REMARK 3 L33: 13.9762 L12: -11.3870 REMARK 3 L13: 2.8968 L23: -8.8846 REMARK 3 S TENSOR REMARK 3 S11: -0.3132 S12: 0.0119 S13: 0.0974 REMARK 3 S21: 0.9268 S22: -0.1459 S23: -0.1561 REMARK 3 S31: -1.1215 S32: 0.9764 S33: 0.4590 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3UD8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-NOV-11. REMARK 100 THE DEPOSITION ID IS D_1000068607. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-DEC-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15908 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.370 REMARK 200 RESOLUTION RANGE LOW (A) : 78.430 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : 0.05500 REMARK 200 FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.47 REMARK 200 COMPLETENESS FOR SHELL (%) : 78.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.24100 REMARK 200 R SYM FOR SHELL (I) : 0.24100 REMARK 200 FOR SHELL : 3.060 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: EPMR REMARK 200 STARTING MODEL: PDB ENTRY 1RG8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 M (NH4)HPO4, 0.1 M SODIUM ACETATE, REMARK 280 PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 56.62150 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.08900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 56.62150 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 23.08900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 PHE A 1 REMARK 465 ASN A 2 REMARK 465 LEU A 3 REMARK 465 PRO A 4 REMARK 465 PRO A 5 REMARK 465 GLY A 6 REMARK 465 ASN A 7 REMARK 465 TYR A 8 REMARK 465 SER A 138 REMARK 465 SER A 139 REMARK 465 ASP A 140 REMARK 465 MET B 0 REMARK 465 PHE B 1 REMARK 465 ASN B 2 REMARK 465 LEU B 3 REMARK 465 PRO B 4 REMARK 465 PRO B 5 REMARK 465 GLY B 6 REMARK 465 ASN B 7 REMARK 465 TYR B 8 REMARK 465 LYS B 9 REMARK 465 SER B 138 REMARK 465 SER B 139 REMARK 465 ASP B 140 REMARK 465 MET C 0 REMARK 465 PHE C 1 REMARK 465 ASN C 2 REMARK 465 LEU C 3 REMARK 465 PRO C 4 REMARK 465 PRO C 5 REMARK 465 GLY C 6 REMARK 465 ASN C 7 REMARK 465 TYR C 8 REMARK 465 LYS C 9 REMARK 465 SER C 139 REMARK 465 ASP C 140 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP B 28 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 28 O HOH A 144 2.11 REMARK 500 O GLY B 19 NH2 ARG B 35 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O LYS A 105 NH1 ARG B 122 2554 1.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 10 -143.27 43.84 REMARK 500 ASN A 18 -70.64 -71.49 REMARK 500 ASP A 32 -169.85 -167.59 REMARK 500 GLU A 49 -84.88 -63.91 REMARK 500 GLU A 90 -168.69 -117.56 REMARK 500 ASN A 92 99.55 167.61 REMARK 500 GLU B 49 -74.87 -78.37 REMARK 500 ASN B 80 -168.73 -122.67 REMARK 500 GLU B 90 -159.32 -128.34 REMARK 500 GLU B 91 -74.03 -38.31 REMARK 500 ASN B 92 113.88 174.68 REMARK 500 ASP C 32 -151.24 -158.88 REMARK 500 GLU C 49 -99.24 -82.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3UD7 RELATED DB: PDB REMARK 900 RELATED ID: 3UD9 RELATED DB: PDB REMARK 900 RELATED ID: 3UDA RELATED DB: PDB DBREF 3UD8 A 1 140 UNP P05230 FGF1_HUMAN 16 155 DBREF 3UD8 B 1 140 UNP P05230 FGF1_HUMAN 16 155 DBREF 3UD8 C 1 140 UNP P05230 FGF1_HUMAN 16 155 SEQADV 3UD8 MET A 0 UNP P05230 EXPRESSION TAG SEQADV 3UD8 MET B 0 UNP P05230 EXPRESSION TAG SEQADV 3UD8 MET C 0 UNP P05230 EXPRESSION TAG SEQRES 1 A 141 MET PHE ASN LEU PRO PRO GLY ASN TYR LYS LYS PRO LYS SEQRES 2 A 141 LEU LEU TYR CYS SER ASN GLY GLY HIS PHE LEU ARG ILE SEQRES 3 A 141 LEU PRO ASP GLY THR VAL ASP GLY THR ARG ASP ARG SER SEQRES 4 A 141 ASP GLN HIS ILE GLN LEU GLN LEU SER ALA GLU SER VAL SEQRES 5 A 141 GLY GLU VAL TYR ILE LYS SER THR GLU THR GLY GLN TYR SEQRES 6 A 141 LEU ALA MET ASP THR ASP GLY LEU LEU TYR GLY SER GLN SEQRES 7 A 141 THR PRO ASN GLU GLU CYS LEU PHE LEU GLU ARG LEU GLU SEQRES 8 A 141 GLU ASN HIS TYR ASN THR TYR ILE SER LYS LYS HIS ALA SEQRES 9 A 141 GLU LYS ASN TRP PHE VAL GLY LEU LYS LYS ASN GLY SER SEQRES 10 A 141 CYS LYS ARG GLY PRO ARG THR HIS TYR GLY GLN LYS ALA SEQRES 11 A 141 ILE LEU PHE LEU PRO LEU PRO VAL SER SER ASP SEQRES 1 B 141 MET PHE ASN LEU PRO PRO GLY ASN TYR LYS LYS PRO LYS SEQRES 2 B 141 LEU LEU TYR CYS SER ASN GLY GLY HIS PHE LEU ARG ILE SEQRES 3 B 141 LEU PRO ASP GLY THR VAL ASP GLY THR ARG ASP ARG SER SEQRES 4 B 141 ASP GLN HIS ILE GLN LEU GLN LEU SER ALA GLU SER VAL SEQRES 5 B 141 GLY GLU VAL TYR ILE LYS SER THR GLU THR GLY GLN TYR SEQRES 6 B 141 LEU ALA MET ASP THR ASP GLY LEU LEU TYR GLY SER GLN SEQRES 7 B 141 THR PRO ASN GLU GLU CYS LEU PHE LEU GLU ARG LEU GLU SEQRES 8 B 141 GLU ASN HIS TYR ASN THR TYR ILE SER LYS LYS HIS ALA SEQRES 9 B 141 GLU LYS ASN TRP PHE VAL GLY LEU LYS LYS ASN GLY SER SEQRES 10 B 141 CYS LYS ARG GLY PRO ARG THR HIS TYR GLY GLN LYS ALA SEQRES 11 B 141 ILE LEU PHE LEU PRO LEU PRO VAL SER SER ASP SEQRES 1 C 141 MET PHE ASN LEU PRO PRO GLY ASN TYR LYS LYS PRO LYS SEQRES 2 C 141 LEU LEU TYR CYS SER ASN GLY GLY HIS PHE LEU ARG ILE SEQRES 3 C 141 LEU PRO ASP GLY THR VAL ASP GLY THR ARG ASP ARG SER SEQRES 4 C 141 ASP GLN HIS ILE GLN LEU GLN LEU SER ALA GLU SER VAL SEQRES 5 C 141 GLY GLU VAL TYR ILE LYS SER THR GLU THR GLY GLN TYR SEQRES 6 C 141 LEU ALA MET ASP THR ASP GLY LEU LEU TYR GLY SER GLN SEQRES 7 C 141 THR PRO ASN GLU GLU CYS LEU PHE LEU GLU ARG LEU GLU SEQRES 8 C 141 GLU ASN HIS TYR ASN THR TYR ILE SER LYS LYS HIS ALA SEQRES 9 C 141 GLU LYS ASN TRP PHE VAL GLY LEU LYS LYS ASN GLY SER SEQRES 10 C 141 CYS LYS ARG GLY PRO ARG THR HIS TYR GLY GLN LYS ALA SEQRES 11 C 141 ILE LEU PHE LEU PRO LEU PRO VAL SER SER ASP HET IDY D 1 18 HET GNX D 2 19 HET PO4 B 141 5 HET PO4 C 141 5 HETNAM IDY 1-O-METHYL-2-O-SULFO-ALPHA-L-IDOPYRANURONIC ACID HETNAM GNX 2-DEOXY-3-O-SULFO-2-(SULFOAMINO)-ALPHA-D-GLUCOPYRANOSE HETNAM PO4 PHOSPHATE ION HETSYN IDY METHYL 2-O-SULFO-ALPHA-L-IDOPYRANOSIDURONIC ACID; 1-O- HETSYN 2 IDY METHYL-2-O-SULFO-ALPHA-L-IDURONIC ACID; 1-O-METHYL-2- HETSYN 3 IDY O-SULFO-L-IDURONIC ACID; 1-O-METHYL-2-O-SULFO-IDURONIC HETSYN 4 IDY ACID HETSYN GNX 2-DEOXY-3-O-SULFO-2-(SULFOAMINO)-ALPHA-D-GLUCOSE; 2- HETSYN 2 GNX DEOXY-3-O-SULFO-2-(SULFOAMINO)-D-GLUCOSE; 2-DEOXY-3-O- HETSYN 3 GNX SULFO-2-(SULFOAMINO)-GLUCOSE FORMUL 4 IDY C7 H12 O10 S FORMUL 4 GNX C6 H13 N O11 S2 FORMUL 5 PO4 2(O4 P 3-) FORMUL 7 HOH *52(H2 O) HELIX 1 1 ASN A 80 CYS A 83 5 4 HELIX 2 2 HIS A 102 ASN A 106 5 5 HELIX 3 3 ARG A 119 THR A 123 5 5 HELIX 4 4 GLN A 127 ILE A 130 5 4 HELIX 5 5 ASN B 80 CYS B 83 5 4 HELIX 6 6 HIS B 102 ASN B 106 5 5 HELIX 7 7 ARG B 119 THR B 123 5 5 HELIX 8 8 GLN B 127 ILE B 130 5 4 HELIX 9 9 ASN C 80 CYS C 83 5 4 HELIX 10 10 HIS C 102 ASN C 106 5 5 HELIX 11 11 ARG C 119 THR C 123 5 5 HELIX 12 12 GLN C 127 ILE C 130 5 4 SHEET 1 A 4 VAL A 31 THR A 34 0 SHEET 2 A 4 HIS A 21 ILE A 25 -1 N ARG A 24 O ASP A 32 SHEET 3 A 4 LYS A 12 CYS A 16 -1 N CYS A 16 O HIS A 21 SHEET 4 A 4 PHE A 132 PRO A 136 -1 O LEU A 133 N TYR A 15 SHEET 1 B 4 LEU A 44 ALA A 48 0 SHEET 2 B 4 GLU A 53 SER A 58 -1 O LYS A 57 N GLN A 45 SHEET 3 B 4 PHE A 85 LEU A 89 -1 O PHE A 85 N VAL A 54 SHEET 4 B 4 ASN A 95 SER A 99 -1 O ILE A 98 N LEU A 86 SHEET 1 C 2 TYR A 64 MET A 67 0 SHEET 2 C 2 LEU A 73 SER A 76 -1 O SER A 76 N TYR A 64 SHEET 1 D 4 VAL B 31 THR B 34 0 SHEET 2 D 4 HIS B 21 ILE B 25 -1 N ARG B 24 O ASP B 32 SHEET 3 D 4 LYS B 12 CYS B 16 -1 N CYS B 16 O HIS B 21 SHEET 4 D 4 PHE B 132 PRO B 136 -1 O LEU B 135 N LEU B 13 SHEET 1 E 4 LEU B 44 ALA B 48 0 SHEET 2 E 4 GLU B 53 SER B 58 -1 O LYS B 57 N GLN B 45 SHEET 3 E 4 PHE B 85 LEU B 89 -1 O PHE B 85 N VAL B 54 SHEET 4 E 4 ASN B 95 SER B 99 -1 O ILE B 98 N LEU B 86 SHEET 1 F 2 TYR B 64 MET B 67 0 SHEET 2 F 2 LEU B 73 SER B 76 -1 O SER B 76 N TYR B 64 SHEET 1 G 4 VAL C 31 THR C 34 0 SHEET 2 G 4 HIS C 21 ILE C 25 -1 N ARG C 24 O ASP C 32 SHEET 3 G 4 LYS C 12 CYS C 16 -1 N CYS C 16 O HIS C 21 SHEET 4 G 4 PHE C 132 PRO C 136 -1 O LEU C 133 N TYR C 15 SHEET 1 H 4 LEU C 44 ALA C 48 0 SHEET 2 H 4 GLU C 53 SER C 58 -1 O LYS C 57 N GLN C 45 SHEET 3 H 4 PHE C 85 LEU C 89 -1 O PHE C 85 N VAL C 54 SHEET 4 H 4 ASN C 95 SER C 99 -1 O THR C 96 N ARG C 88 SHEET 1 I 2 TYR C 64 MET C 67 0 SHEET 2 I 2 LEU C 73 SER C 76 -1 O SER C 76 N TYR C 64 LINK O4 IDY D 1 C1 GNX D 2 1555 1555 1.41 CISPEP 1 LYS A 10 PRO A 11 0 -8.03 CISPEP 2 GLU A 91 ASN A 92 0 3.31 CISPEP 3 ASN A 92 HIS A 93 0 8.17 CISPEP 4 ASN B 92 HIS B 93 0 -9.35 CRYST1 113.243 46.178 96.689 90.00 125.79 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008831 0.000000 0.006366 0.00000 SCALE2 0.000000 0.021655 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012750 0.00000