data_3UG9 # _entry.id 3UG9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.283 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3UG9 RCSB RCSB068716 WWPDB D_1000068716 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3UGA _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3UG9 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2011-11-02 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kato, H.E.' 1 'Ishitani, R.' 2 'Nureki, O.' 3 # _citation.id primary _citation.title 'Crystal structure of the channelrhodopsin light-gated cation channel' _citation.journal_abbrev Nature _citation.journal_volume 482 _citation.page_first 369 _citation.page_last 374 _citation.year 2012 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22266941 _citation.pdbx_database_id_DOI 10.1038/nature10870 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Kato, H.E.' 1 primary 'Zhang, F.' 2 primary 'Yizhar, O.' 3 primary 'Ramakrishnan, C.' 4 primary 'Nishizawa, T.' 5 primary 'Hirata, K.' 6 primary 'Ito, J.' 7 primary 'Aita, Y.' 8 primary 'Tsukazaki, T.' 9 primary 'Hayashi, S.' 10 primary 'Hegemann, P.' 11 primary 'Maturana, A.D.' 12 primary 'Ishitani, R.' 13 primary 'Deisseroth, K.' 14 primary 'Nureki, O.' 15 # _cell.length_a 59.471 _cell.length_b 139.114 _cell.length_c 90.049 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3UG9 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.entry_id 3UG9 _symmetry.Int_Tables_number 20 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Archaeal-type opsin 1, Archaeal-type opsin 2' 37441.984 1 ? ? ? ;chimera protein of Archaeal-type opsin 1 (UNP residues 24-245) and Archaeal-type opsin 2 (UNP residues 207-309) from Chlamydomonas reinhardtii ; 2 non-polymer syn RETINAL 284.436 1 ? ? ? ? 3 non-polymer syn 'OLEIC ACID' 282.461 6 ? ? ? ? 4 water nat water 18.015 43 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Channelopsin-1, Chlamyopsin 4 light-gated ion channel, Retinal binding protein, Sensory opsin B' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;STGSDATVPVATQDGPDYVFHRAHERMLFQTSYTLENNGSVICIPNNGQCFCLAWLKSNGTNAEKLAANILQWITFALSA LCLMFYGYQTWKSTCGWEEIYVATIEMIKFIIEYFHEFDEPAVIYSSNGNKTVWLRYAEWLLTCPVILIHLSNLTGLAND YNKRTMGLLVSDIGTIVWGTTAALSKGYVRVIFFLMGLCYGIYTFFNAAKVYIEAYHTVPKGRCRQVVTGMAWLFFVSWG MFPILFILGPEGFGVLSVYGSTVGHTIIDLMSKNCWGLLGHYLRVLIHEHILIHGDIRKTTKLNIGGTEIEVETLVEDEA EAGAVSSEDLYFQ ; _entity_poly.pdbx_seq_one_letter_code_can ;STGSDATVPVATQDGPDYVFHRAHERMLFQTSYTLENNGSVICIPNNGQCFCLAWLKSNGTNAEKLAANILQWITFALSA LCLMFYGYQTWKSTCGWEEIYVATIEMIKFIIEYFHEFDEPAVIYSSNGNKTVWLRYAEWLLTCPVILIHLSNLTGLAND YNKRTMGLLVSDIGTIVWGTTAALSKGYVRVIFFLMGLCYGIYTFFNAAKVYIEAYHTVPKGRCRQVVTGMAWLFFVSWG MFPILFILGPEGFGVLSVYGSTVGHTIIDLMSKNCWGLLGHYLRVLIHEHILIHGDIRKTTKLNIGGTEIEVETLVEDEA EAGAVSSEDLYFQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 THR n 1 3 GLY n 1 4 SER n 1 5 ASP n 1 6 ALA n 1 7 THR n 1 8 VAL n 1 9 PRO n 1 10 VAL n 1 11 ALA n 1 12 THR n 1 13 GLN n 1 14 ASP n 1 15 GLY n 1 16 PRO n 1 17 ASP n 1 18 TYR n 1 19 VAL n 1 20 PHE n 1 21 HIS n 1 22 ARG n 1 23 ALA n 1 24 HIS n 1 25 GLU n 1 26 ARG n 1 27 MET n 1 28 LEU n 1 29 PHE n 1 30 GLN n 1 31 THR n 1 32 SER n 1 33 TYR n 1 34 THR n 1 35 LEU n 1 36 GLU n 1 37 ASN n 1 38 ASN n 1 39 GLY n 1 40 SER n 1 41 VAL n 1 42 ILE n 1 43 CYS n 1 44 ILE n 1 45 PRO n 1 46 ASN n 1 47 ASN n 1 48 GLY n 1 49 GLN n 1 50 CYS n 1 51 PHE n 1 52 CYS n 1 53 LEU n 1 54 ALA n 1 55 TRP n 1 56 LEU n 1 57 LYS n 1 58 SER n 1 59 ASN n 1 60 GLY n 1 61 THR n 1 62 ASN n 1 63 ALA n 1 64 GLU n 1 65 LYS n 1 66 LEU n 1 67 ALA n 1 68 ALA n 1 69 ASN n 1 70 ILE n 1 71 LEU n 1 72 GLN n 1 73 TRP n 1 74 ILE n 1 75 THR n 1 76 PHE n 1 77 ALA n 1 78 LEU n 1 79 SER n 1 80 ALA n 1 81 LEU n 1 82 CYS n 1 83 LEU n 1 84 MET n 1 85 PHE n 1 86 TYR n 1 87 GLY n 1 88 TYR n 1 89 GLN n 1 90 THR n 1 91 TRP n 1 92 LYS n 1 93 SER n 1 94 THR n 1 95 CYS n 1 96 GLY n 1 97 TRP n 1 98 GLU n 1 99 GLU n 1 100 ILE n 1 101 TYR n 1 102 VAL n 1 103 ALA n 1 104 THR n 1 105 ILE n 1 106 GLU n 1 107 MET n 1 108 ILE n 1 109 LYS n 1 110 PHE n 1 111 ILE n 1 112 ILE n 1 113 GLU n 1 114 TYR n 1 115 PHE n 1 116 HIS n 1 117 GLU n 1 118 PHE n 1 119 ASP n 1 120 GLU n 1 121 PRO n 1 122 ALA n 1 123 VAL n 1 124 ILE n 1 125 TYR n 1 126 SER n 1 127 SER n 1 128 ASN n 1 129 GLY n 1 130 ASN n 1 131 LYS n 1 132 THR n 1 133 VAL n 1 134 TRP n 1 135 LEU n 1 136 ARG n 1 137 TYR n 1 138 ALA n 1 139 GLU n 1 140 TRP n 1 141 LEU n 1 142 LEU n 1 143 THR n 1 144 CYS n 1 145 PRO n 1 146 VAL n 1 147 ILE n 1 148 LEU n 1 149 ILE n 1 150 HIS n 1 151 LEU n 1 152 SER n 1 153 ASN n 1 154 LEU n 1 155 THR n 1 156 GLY n 1 157 LEU n 1 158 ALA n 1 159 ASN n 1 160 ASP n 1 161 TYR n 1 162 ASN n 1 163 LYS n 1 164 ARG n 1 165 THR n 1 166 MET n 1 167 GLY n 1 168 LEU n 1 169 LEU n 1 170 VAL n 1 171 SER n 1 172 ASP n 1 173 ILE n 1 174 GLY n 1 175 THR n 1 176 ILE n 1 177 VAL n 1 178 TRP n 1 179 GLY n 1 180 THR n 1 181 THR n 1 182 ALA n 1 183 ALA n 1 184 LEU n 1 185 SER n 1 186 LYS n 1 187 GLY n 1 188 TYR n 1 189 VAL n 1 190 ARG n 1 191 VAL n 1 192 ILE n 1 193 PHE n 1 194 PHE n 1 195 LEU n 1 196 MET n 1 197 GLY n 1 198 LEU n 1 199 CYS n 1 200 TYR n 1 201 GLY n 1 202 ILE n 1 203 TYR n 1 204 THR n 1 205 PHE n 1 206 PHE n 1 207 ASN n 1 208 ALA n 1 209 ALA n 1 210 LYS n 1 211 VAL n 1 212 TYR n 1 213 ILE n 1 214 GLU n 1 215 ALA n 1 216 TYR n 1 217 HIS n 1 218 THR n 1 219 VAL n 1 220 PRO n 1 221 LYS n 1 222 GLY n 1 223 ARG n 1 224 CYS n 1 225 ARG n 1 226 GLN n 1 227 VAL n 1 228 VAL n 1 229 THR n 1 230 GLY n 1 231 MET n 1 232 ALA n 1 233 TRP n 1 234 LEU n 1 235 PHE n 1 236 PHE n 1 237 VAL n 1 238 SER n 1 239 TRP n 1 240 GLY n 1 241 MET n 1 242 PHE n 1 243 PRO n 1 244 ILE n 1 245 LEU n 1 246 PHE n 1 247 ILE n 1 248 LEU n 1 249 GLY n 1 250 PRO n 1 251 GLU n 1 252 GLY n 1 253 PHE n 1 254 GLY n 1 255 VAL n 1 256 LEU n 1 257 SER n 1 258 VAL n 1 259 TYR n 1 260 GLY n 1 261 SER n 1 262 THR n 1 263 VAL n 1 264 GLY n 1 265 HIS n 1 266 THR n 1 267 ILE n 1 268 ILE n 1 269 ASP n 1 270 LEU n 1 271 MET n 1 272 SER n 1 273 LYS n 1 274 ASN n 1 275 CYS n 1 276 TRP n 1 277 GLY n 1 278 LEU n 1 279 LEU n 1 280 GLY n 1 281 HIS n 1 282 TYR n 1 283 LEU n 1 284 ARG n 1 285 VAL n 1 286 LEU n 1 287 ILE n 1 288 HIS n 1 289 GLU n 1 290 HIS n 1 291 ILE n 1 292 LEU n 1 293 ILE n 1 294 HIS n 1 295 GLY n 1 296 ASP n 1 297 ILE n 1 298 ARG n 1 299 LYS n 1 300 THR n 1 301 THR n 1 302 LYS n 1 303 LEU n 1 304 ASN n 1 305 ILE n 1 306 GLY n 1 307 GLY n 1 308 THR n 1 309 GLU n 1 310 ILE n 1 311 GLU n 1 312 VAL n 1 313 GLU n 1 314 THR n 1 315 LEU n 1 316 VAL n 1 317 GLU n 1 318 ASP n 1 319 GLU n 1 320 ALA n 1 321 GLU n 1 322 ALA n 1 323 GLY n 1 324 ALA n 1 325 VAL n 1 326 SER n 1 327 SER n 1 328 GLU n 1 329 ASP n 1 330 LEU n 1 331 TYR n 1 332 PHE n 1 333 GLN n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? 1 222 ? ? 'acop1, acop2, CHLREDRAFT_182032, cop4, CSOB' ? ? ? ? ? ? 'Chlamydomonas reinhardtii' 3055 ? ? ? ? ? ? ? ? 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? ? ? Sf9 ? ? ? ? ? baculovirus ? ? ? pFastBac ? ? 1 2 sample ? 223 325 ? ? 'acop1, acop2, CHLREDRAFT_182032, cop4, CSOB' ? ? ? ? ? ? 'Chlamydomonas reinhardtii' 3055 ? ? ? ? ? ? ? ? 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? ? ? Sf9 ? ? ? ? ? baculovirus ? ? ? pFastBac ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q93WP2_CHLRE Q93WP2 1 ;STGSDATVPVATQDGPDYVFHRAHERMLFQTSYTLENNGSVICIPNNGQCFCLAWLKSNGTNAEKLAANILQWITFALSA LCLMFYGYQTWKSTCGWEEIYVATIEMIKFIIEYFHEFDEPAVIYSSNGNKTVWLRYAEWLLTCPVILIHLSNLTGLAND YNKRTMGLLVSDIGTIVWGTTAALSKGYVRVIFFLMGLCYGIYTFFNAAKVYIEAYHTVPKG ; 24 ? 2 UNP Q8RUT8_CHLRE Q8RUT8 1 ;RCRQVVTGMAWLFFVSWGMFPILFILGPEGFGVLSVYGSTVGHTIIDLMSKNCWGLLGHYLRVLIHEHILIHGDIRKTTK LNIGGTEIEVETLVEDEAEAGAV ; 207 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3UG9 A 1 ? 222 ? Q93WP2 24 ? 245 ? 24 245 2 2 3UG9 A 223 ? 325 ? Q8RUT8 207 ? 309 ? 246 348 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 2 3UG9 SER A 326 ? UNP Q8RUT8 ? ? 'EXPRESSION TAG' 349 1 2 3UG9 SER A 327 ? UNP Q8RUT8 ? ? 'EXPRESSION TAG' 350 2 2 3UG9 GLU A 328 ? UNP Q8RUT8 ? ? 'EXPRESSION TAG' 351 3 2 3UG9 ASP A 329 ? UNP Q8RUT8 ? ? 'EXPRESSION TAG' 352 4 2 3UG9 LEU A 330 ? UNP Q8RUT8 ? ? 'EXPRESSION TAG' 353 5 2 3UG9 TYR A 331 ? UNP Q8RUT8 ? ? 'EXPRESSION TAG' 354 6 2 3UG9 PHE A 332 ? UNP Q8RUT8 ? ? 'EXPRESSION TAG' 355 7 2 3UG9 GLN A 333 ? UNP Q8RUT8 ? ? 'EXPRESSION TAG' 356 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 OLA non-polymer . 'OLEIC ACID' ? 'C18 H34 O2' 282.461 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 RET non-polymer . RETINAL ? 'C20 H28 O' 284.436 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3UG9 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.49 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 50.55 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'lipid cubic phase' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '30% PEG 500 DME, 100mM Na Citrate (pH6.0), 100mM MgCl2, 100mM NaCl, 100mM (NH4)2SO4, lipid cubic phase, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.pdbx_collection_date 2011-09-02 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X06SA' _diffrn_source.pdbx_wavelength_list 0.9795 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X06SA # _reflns.entry_id 3UG9 _reflns.d_resolution_high 2.300 _reflns.number_obs 18985 _reflns.pdbx_Rmerge_I_obs 0.080 _reflns.pdbx_netI_over_sigmaI 16.500 _reflns.percent_possible_obs 97.900 _reflns.B_iso_Wilson_estimate 53.000 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 37.80 _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.300 2.440 16827 ? 2581 ? 0.936 1.940 ? ? ? ? ? 2699 ? ? 0.828 ? ? 95.600 1.017 ? 1 1 2.440 2.610 16904 ? 2475 ? 0.568 3.410 ? ? ? ? ? 2536 ? ? 0.488 ? ? 97.600 0.615 ? 2 1 2.610 2.810 16066 ? 2347 ? 0.337 5.680 ? ? ? ? ? 2385 ? ? 0.276 ? ? 98.400 0.364 ? 3 1 2.810 3.080 14184 ? 2163 ? 0.195 9.120 ? ? ? ? ? 2191 ? ? 0.162 ? ? 98.700 0.212 ? 4 1 3.080 3.440 13547 ? 1967 ? 0.119 15.060 ? ? ? ? ? 1993 ? ? 0.095 ? ? 98.700 0.129 ? 5 1 3.440 3.970 11400 ? 1742 ? 0.057 28.160 ? ? ? ? ? 1770 ? ? 0.047 ? ? 98.400 0.062 ? 6 1 3.970 4.860 9928 ? 1498 ? 0.035 42.480 ? ? ? ? ? 1515 ? ? 0.024 ? ? 98.900 0.038 ? 7 1 4.860 6.830 7441 ? 1179 ? 0.039 39.800 ? ? ? ? ? 1195 ? ? 0.027 ? ? 98.700 0.043 ? 8 1 6.830 ? 4197 ? 709 ? 0.024 55.270 ? ? ? ? ? 726 ? ? 0.016 ? ? 97.700 0.026 ? 9 1 # _refine.entry_id 3UG9 _refine.ls_d_res_high 2.3000 _refine.ls_d_res_low 36.5690 _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.4000 _refine.ls_number_reflns_obs 16709 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2088 _refine.ls_R_factor_R_work 0.2040 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2512 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 10.0100 _refine.ls_number_reflns_R_free 1672 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 51.5985 _refine.solvent_model_param_bsol 37.3340 _refine.solvent_model_param_ksol 0.3180 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 2.9262 _refine.aniso_B[2][2] -15.2461 _refine.aniso_B[3][3] 12.3199 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.7800 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.0000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.7300 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8366 _refine.B_iso_max 165.720 _refine.B_iso_min 21.080 _refine.pdbx_overall_phase_error 23.2600 _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2179 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 85 _refine_hist.number_atoms_solvent 43 _refine_hist.number_atoms_total 2307 _refine_hist.d_res_high 2.3000 _refine_hist.d_res_low 36.5690 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 2329 0.008 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 3151 1.306 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 356 0.086 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 382 0.006 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 799 19.077 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.redundancy_reflns_obs 2.3000 2.3677 12 98.0000 1222 . 0.2832 0.3226 . 136 . 1358 . 'X-RAY DIFFRACTION' . 2.3677 2.4441 12 99.0000 1245 . 0.2778 0.3384 . 139 . 1384 . 'X-RAY DIFFRACTION' . 2.4441 2.5314 12 98.0000 1207 . 0.2438 0.3349 . 134 . 1341 . 'X-RAY DIFFRACTION' . 2.5314 2.6328 12 98.0000 1238 . 0.2032 0.2422 . 137 . 1375 . 'X-RAY DIFFRACTION' . 2.6328 2.7526 12 98.0000 1224 . 0.1757 0.2342 . 137 . 1361 . 'X-RAY DIFFRACTION' . 2.7526 2.8976 12 98.0000 1250 . 0.1801 0.2731 . 138 . 1388 . 'X-RAY DIFFRACTION' . 2.8976 3.0791 12 99.0000 1247 . 0.1922 0.2912 . 138 . 1385 . 'X-RAY DIFFRACTION' . 3.0791 3.3167 12 98.0000 1249 . 0.1964 0.2578 . 139 . 1388 . 'X-RAY DIFFRACTION' . 3.3167 3.6502 12 99.0000 1258 . 0.1835 0.2275 . 139 . 1397 . 'X-RAY DIFFRACTION' . 3.6502 4.1777 12 99.0000 1278 . 0.1917 0.2418 . 143 . 1421 . 'X-RAY DIFFRACTION' . 4.1777 5.2610 12 99.0000 1269 . 0.1942 0.2441 . 141 . 1410 . 'X-RAY DIFFRACTION' . 5.2610 36.5733 12 98.0000 1350 . 0.2276 0.2258 . 151 . 1501 . 'X-RAY DIFFRACTION' . # _struct.entry_id 3UG9 _struct.title 'Crystal Structure of the Closed State of Channelrhodopsin' _struct.pdbx_descriptor 'Archaeal-type opsin 1, Archaeal-type opsin 2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3UG9 _struct_keywords.text 'microbialrhodopsin, seven-transmembrane, light-gated cation channel, MEMBRANE PROTEIN' _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CYS A 52 ? LYS A 57 ? CYS A 75 LYS A 80 1 ? 6 HELX_P HELX_P2 2 THR A 61 ? TYR A 86 ? THR A 84 TYR A 109 1 ? 26 HELX_P HELX_P3 3 GLY A 96 ? GLU A 117 ? GLY A 119 GLU A 140 1 ? 22 HELX_P HELX_P4 4 VAL A 133 ? SER A 152 ? VAL A 156 SER A 175 1 ? 20 HELX_P HELX_P5 5 ASN A 162 ? SER A 185 ? ASN A 185 SER A 208 1 ? 24 HELX_P HELX_P6 6 LYS A 186 ? VAL A 219 ? LYS A 209 VAL A 242 1 ? 34 HELX_P HELX_P7 7 GLY A 222 ? GLY A 249 ? GLY A 245 GLY A 272 1 ? 28 HELX_P HELX_P8 8 SER A 257 ? LYS A 273 ? SER A 280 LYS A 296 1 ? 17 HELX_P HELX_P9 9 LYS A 273 ? GLY A 295 ? LYS A 296 GLY A 318 1 ? 23 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 43 SG ? ? ? 1_555 A CYS 43 SG ? ? A CYS 66 A CYS 66 3_555 ? ? ? ? ? ? ? 2.032 ? disulf2 disulf ? ? A CYS 50 SG ? ? ? 1_555 A CYS 52 SG ? ? A CYS 73 A CYS 75 3_555 ? ? ? ? ? ? ? 2.057 ? covale1 covale ? ? B RET . C15 ? ? ? 1_555 A LYS 273 NZ ? ? A RET 401 A LYS 296 1_555 ? ? ? ? ? ? ? 1.470 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLU _struct_mon_prot_cis.label_seq_id 120 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLU _struct_mon_prot_cis.auth_seq_id 143 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 121 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 144 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.25 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 34 ? GLU A 36 ? THR A 57 GLU A 59 A 2 VAL A 41 ? CYS A 43 ? VAL A 64 CYS A 66 B 1 ILE A 124 ? TYR A 125 ? ILE A 147 TYR A 148 B 2 LYS A 131 ? THR A 132 ? LYS A 154 THR A 155 C 1 ILE A 297 ? THR A 301 ? ILE A 320 THR A 324 C 2 VAL A 312 ? VAL A 316 ? VAL A 335 VAL A 339 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 36 ? N GLU A 59 O VAL A 41 ? O VAL A 64 B 1 2 N ILE A 124 ? N ILE A 147 O THR A 132 ? O THR A 155 C 1 2 N THR A 301 ? N THR A 324 O VAL A 312 ? O VAL A 335 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE RET A 401' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE OLA A 501' AC3 Software ? ? ? ? 10 'BINDING SITE FOR RESIDUE OLA A 502' AC4 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE OLA A 503' AC5 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE OLA A 504' AC6 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE OLA A 505' AC7 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE OLA A 506' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 TRP A 140 ? TRP A 163 . ? 1_555 ? 2 AC1 8 CYS A 144 ? CYS A 167 . ? 1_555 ? 3 AC1 8 THR A 175 ? THR A 198 . ? 1_555 ? 4 AC1 8 GLY A 179 ? GLY A 202 . ? 1_555 ? 5 AC1 8 TRP A 239 ? TRP A 262 . ? 1_555 ? 6 AC1 8 PHE A 242 ? PHE A 265 . ? 1_555 ? 7 AC1 8 SER A 272 ? SER A 295 . ? 1_555 ? 8 AC1 8 LYS A 273 ? LYS A 296 . ? 1_555 ? 9 AC2 6 TRP A 97 ? TRP A 120 . ? 3_555 ? 10 AC2 6 LYS A 163 ? LYS A 186 . ? 1_555 ? 11 AC2 6 GLY A 167 ? GLY A 190 . ? 1_555 ? 12 AC2 6 CYS A 199 ? CYS A 222 . ? 1_555 ? 13 AC2 6 TYR A 200 ? TYR A 223 . ? 1_555 ? 14 AC2 6 TYR A 203 ? TYR A 226 . ? 1_555 ? 15 AC3 10 ILE A 112 ? ILE A 135 . ? 1_555 ? 16 AC3 10 HIS A 116 ? HIS A 139 . ? 1_555 ? 17 AC3 10 ASP A 119 ? ASP A 142 . ? 1_555 ? 18 AC3 10 GLU A 120 ? GLU A 143 . ? 1_555 ? 19 AC3 10 PRO A 121 ? PRO A 144 . ? 1_555 ? 20 AC3 10 ALA A 122 ? ALA A 145 . ? 1_555 ? 21 AC3 10 LEU A 135 ? LEU A 158 . ? 1_555 ? 22 AC3 10 ALA A 138 ? ALA A 161 . ? 1_555 ? 23 AC3 10 LEU A 142 ? LEU A 165 . ? 1_555 ? 24 AC3 10 THR A 181 ? THR A 204 . ? 3_555 ? 25 AC4 1 HIS A 116 ? HIS A 139 . ? 3_555 ? 26 AC5 5 GLY A 187 ? GLY A 210 . ? 1_555 ? 27 AC5 5 ARG A 190 ? ARG A 213 . ? 1_555 ? 28 AC5 5 PHE A 194 ? PHE A 217 . ? 1_555 ? 29 AC5 5 GLY A 252 ? GLY A 275 . ? 1_555 ? 30 AC5 5 PHE A 253 ? PHE A 276 . ? 1_555 ? 31 AC6 1 GLY A 264 ? GLY A 287 . ? 1_555 ? 32 AC7 1 ILE A 70 ? ILE A 93 . ? 8_455 ? # _atom_sites.entry_id 3UG9 _atom_sites.fract_transf_matrix[1][1] 0.016815 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007188 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011105 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 24 ? ? ? A . n A 1 2 THR 2 25 ? ? ? A . n A 1 3 GLY 3 26 ? ? ? A . n A 1 4 SER 4 27 ? ? ? A . n A 1 5 ASP 5 28 ? ? ? A . n A 1 6 ALA 6 29 ? ? ? A . n A 1 7 THR 7 30 ? ? ? A . n A 1 8 VAL 8 31 ? ? ? A . n A 1 9 PRO 9 32 ? ? ? A . n A 1 10 VAL 10 33 ? ? ? A . n A 1 11 ALA 11 34 ? ? ? A . n A 1 12 THR 12 35 ? ? ? A . n A 1 13 GLN 13 36 ? ? ? A . n A 1 14 ASP 14 37 ? ? ? A . n A 1 15 GLY 15 38 ? ? ? A . n A 1 16 PRO 16 39 ? ? ? A . n A 1 17 ASP 17 40 ? ? ? A . n A 1 18 TYR 18 41 ? ? ? A . n A 1 19 VAL 19 42 ? ? ? A . n A 1 20 PHE 20 43 ? ? ? A . n A 1 21 HIS 21 44 ? ? ? A . n A 1 22 ARG 22 45 ? ? ? A . n A 1 23 ALA 23 46 ? ? ? A . n A 1 24 HIS 24 47 ? ? ? A . n A 1 25 GLU 25 48 ? ? ? A . n A 1 26 ARG 26 49 49 ARG ARG A . n A 1 27 MET 27 50 50 MET MET A . n A 1 28 LEU 28 51 51 LEU LEU A . n A 1 29 PHE 29 52 52 PHE PHE A . n A 1 30 GLN 30 53 53 GLN GLN A . n A 1 31 THR 31 54 54 THR THR A . n A 1 32 SER 32 55 55 SER SER A . n A 1 33 TYR 33 56 56 TYR TYR A . n A 1 34 THR 34 57 57 THR THR A . n A 1 35 LEU 35 58 58 LEU LEU A . n A 1 36 GLU 36 59 59 GLU GLU A . n A 1 37 ASN 37 60 60 ASN ASN A . n A 1 38 ASN 38 61 61 ASN ASN A . n A 1 39 GLY 39 62 62 GLY GLY A . n A 1 40 SER 40 63 63 SER SER A . n A 1 41 VAL 41 64 64 VAL VAL A . n A 1 42 ILE 42 65 65 ILE ILE A . n A 1 43 CYS 43 66 66 CYS CYS A . n A 1 44 ILE 44 67 67 ILE ILE A . n A 1 45 PRO 45 68 68 PRO PRO A . n A 1 46 ASN 46 69 69 ASN ASN A . n A 1 47 ASN 47 70 70 ASN ASN A . n A 1 48 GLY 48 71 71 GLY GLY A . n A 1 49 GLN 49 72 72 GLN GLN A . n A 1 50 CYS 50 73 73 CYS CYS A . n A 1 51 PHE 51 74 74 PHE PHE A . n A 1 52 CYS 52 75 75 CYS CYS A . n A 1 53 LEU 53 76 76 LEU LEU A . n A 1 54 ALA 54 77 77 ALA ALA A . n A 1 55 TRP 55 78 78 TRP TRP A . n A 1 56 LEU 56 79 79 LEU LEU A . n A 1 57 LYS 57 80 80 LYS LYS A . n A 1 58 SER 58 81 81 SER SER A . n A 1 59 ASN 59 82 82 ASN ASN A . n A 1 60 GLY 60 83 83 GLY GLY A . n A 1 61 THR 61 84 84 THR THR A . n A 1 62 ASN 62 85 85 ASN ASN A . n A 1 63 ALA 63 86 86 ALA ALA A . n A 1 64 GLU 64 87 87 GLU GLU A . n A 1 65 LYS 65 88 88 LYS LYS A . n A 1 66 LEU 66 89 89 LEU LEU A . n A 1 67 ALA 67 90 90 ALA ALA A . n A 1 68 ALA 68 91 91 ALA ALA A . n A 1 69 ASN 69 92 92 ASN ASN A . n A 1 70 ILE 70 93 93 ILE ILE A . n A 1 71 LEU 71 94 94 LEU LEU A . n A 1 72 GLN 72 95 95 GLN GLN A . n A 1 73 TRP 73 96 96 TRP TRP A . n A 1 74 ILE 74 97 97 ILE ILE A . n A 1 75 THR 75 98 98 THR THR A . n A 1 76 PHE 76 99 99 PHE PHE A . n A 1 77 ALA 77 100 100 ALA ALA A . n A 1 78 LEU 78 101 101 LEU LEU A . n A 1 79 SER 79 102 102 SER SER A . n A 1 80 ALA 80 103 103 ALA ALA A . n A 1 81 LEU 81 104 104 LEU LEU A . n A 1 82 CYS 82 105 105 CYS CYS A . n A 1 83 LEU 83 106 106 LEU LEU A . n A 1 84 MET 84 107 107 MET MET A . n A 1 85 PHE 85 108 108 PHE PHE A . n A 1 86 TYR 86 109 109 TYR TYR A . n A 1 87 GLY 87 110 ? ? ? A . n A 1 88 TYR 88 111 ? ? ? A . n A 1 89 GLN 89 112 ? ? ? A . n A 1 90 THR 90 113 ? ? ? A . n A 1 91 TRP 91 114 ? ? ? A . n A 1 92 LYS 92 115 ? ? ? A . n A 1 93 SER 93 116 ? ? ? A . n A 1 94 THR 94 117 ? ? ? A . n A 1 95 CYS 95 118 118 CYS CYS A . n A 1 96 GLY 96 119 119 GLY GLY A . n A 1 97 TRP 97 120 120 TRP TRP A . n A 1 98 GLU 98 121 121 GLU GLU A . n A 1 99 GLU 99 122 122 GLU GLU A . n A 1 100 ILE 100 123 123 ILE ILE A . n A 1 101 TYR 101 124 124 TYR TYR A . n A 1 102 VAL 102 125 125 VAL VAL A . n A 1 103 ALA 103 126 126 ALA ALA A . n A 1 104 THR 104 127 127 THR THR A . n A 1 105 ILE 105 128 128 ILE ILE A . n A 1 106 GLU 106 129 129 GLU GLU A . n A 1 107 MET 107 130 130 MET MET A . n A 1 108 ILE 108 131 131 ILE ILE A . n A 1 109 LYS 109 132 132 LYS LYS A . n A 1 110 PHE 110 133 133 PHE PHE A . n A 1 111 ILE 111 134 134 ILE ILE A . n A 1 112 ILE 112 135 135 ILE ILE A . n A 1 113 GLU 113 136 136 GLU GLU A . n A 1 114 TYR 114 137 137 TYR TYR A . n A 1 115 PHE 115 138 138 PHE PHE A . n A 1 116 HIS 116 139 139 HIS HIS A . n A 1 117 GLU 117 140 140 GLU GLU A . n A 1 118 PHE 118 141 141 PHE PHE A . n A 1 119 ASP 119 142 142 ASP ASP A . n A 1 120 GLU 120 143 143 GLU GLU A . n A 1 121 PRO 121 144 144 PRO PRO A . n A 1 122 ALA 122 145 145 ALA ALA A . n A 1 123 VAL 123 146 146 VAL VAL A . n A 1 124 ILE 124 147 147 ILE ILE A . n A 1 125 TYR 125 148 148 TYR TYR A . n A 1 126 SER 126 149 149 SER SER A . n A 1 127 SER 127 150 150 SER SER A . n A 1 128 ASN 128 151 151 ASN ASN A . n A 1 129 GLY 129 152 152 GLY GLY A . n A 1 130 ASN 130 153 153 ASN ASN A . n A 1 131 LYS 131 154 154 LYS LYS A . n A 1 132 THR 132 155 155 THR THR A . n A 1 133 VAL 133 156 156 VAL VAL A . n A 1 134 TRP 134 157 157 TRP TRP A . n A 1 135 LEU 135 158 158 LEU LEU A . n A 1 136 ARG 136 159 159 ARG ARG A . n A 1 137 TYR 137 160 160 TYR TYR A . n A 1 138 ALA 138 161 161 ALA ALA A . n A 1 139 GLU 139 162 162 GLU GLU A . n A 1 140 TRP 140 163 163 TRP TRP A . n A 1 141 LEU 141 164 164 LEU LEU A . n A 1 142 LEU 142 165 165 LEU LEU A . n A 1 143 THR 143 166 166 THR THR A . n A 1 144 CYS 144 167 167 CYS CYS A . n A 1 145 PRO 145 168 168 PRO PRO A . n A 1 146 VAL 146 169 169 VAL VAL A . n A 1 147 ILE 147 170 170 ILE ILE A . n A 1 148 LEU 148 171 171 LEU LEU A . n A 1 149 ILE 149 172 172 ILE ILE A . n A 1 150 HIS 150 173 173 HIS HIS A . n A 1 151 LEU 151 174 174 LEU LEU A . n A 1 152 SER 152 175 175 SER SER A . n A 1 153 ASN 153 176 176 ASN ASN A . n A 1 154 LEU 154 177 177 LEU LEU A . n A 1 155 THR 155 178 178 THR THR A . n A 1 156 GLY 156 179 179 GLY GLY A . n A 1 157 LEU 157 180 180 LEU LEU A . n A 1 158 ALA 158 181 181 ALA ALA A . n A 1 159 ASN 159 182 182 ASN ASN A . n A 1 160 ASP 160 183 183 ASP ASP A . n A 1 161 TYR 161 184 184 TYR TYR A . n A 1 162 ASN 162 185 185 ASN ASN A . n A 1 163 LYS 163 186 186 LYS LYS A . n A 1 164 ARG 164 187 187 ARG ARG A . n A 1 165 THR 165 188 188 THR THR A . n A 1 166 MET 166 189 189 MET MET A . n A 1 167 GLY 167 190 190 GLY GLY A . n A 1 168 LEU 168 191 191 LEU LEU A . n A 1 169 LEU 169 192 192 LEU LEU A . n A 1 170 VAL 170 193 193 VAL VAL A . n A 1 171 SER 171 194 194 SER SER A . n A 1 172 ASP 172 195 195 ASP ASP A . n A 1 173 ILE 173 196 196 ILE ILE A . n A 1 174 GLY 174 197 197 GLY GLY A . n A 1 175 THR 175 198 198 THR THR A . n A 1 176 ILE 176 199 199 ILE ILE A . n A 1 177 VAL 177 200 200 VAL VAL A . n A 1 178 TRP 178 201 201 TRP TRP A . n A 1 179 GLY 179 202 202 GLY GLY A . n A 1 180 THR 180 203 203 THR THR A . n A 1 181 THR 181 204 204 THR THR A . n A 1 182 ALA 182 205 205 ALA ALA A . n A 1 183 ALA 183 206 206 ALA ALA A . n A 1 184 LEU 184 207 207 LEU LEU A . n A 1 185 SER 185 208 208 SER SER A . n A 1 186 LYS 186 209 209 LYS LYS A . n A 1 187 GLY 187 210 210 GLY GLY A . n A 1 188 TYR 188 211 211 TYR TYR A . n A 1 189 VAL 189 212 212 VAL VAL A . n A 1 190 ARG 190 213 213 ARG ARG A . n A 1 191 VAL 191 214 214 VAL VAL A . n A 1 192 ILE 192 215 215 ILE ILE A . n A 1 193 PHE 193 216 216 PHE PHE A . n A 1 194 PHE 194 217 217 PHE PHE A . n A 1 195 LEU 195 218 218 LEU LEU A . n A 1 196 MET 196 219 219 MET MET A . n A 1 197 GLY 197 220 220 GLY GLY A . n A 1 198 LEU 198 221 221 LEU LEU A . n A 1 199 CYS 199 222 222 CYS CYS A . n A 1 200 TYR 200 223 223 TYR TYR A . n A 1 201 GLY 201 224 224 GLY GLY A . n A 1 202 ILE 202 225 225 ILE ILE A . n A 1 203 TYR 203 226 226 TYR TYR A . n A 1 204 THR 204 227 227 THR THR A . n A 1 205 PHE 205 228 228 PHE PHE A . n A 1 206 PHE 206 229 229 PHE PHE A . n A 1 207 ASN 207 230 230 ASN ASN A . n A 1 208 ALA 208 231 231 ALA ALA A . n A 1 209 ALA 209 232 232 ALA ALA A . n A 1 210 LYS 210 233 233 LYS LYS A . n A 1 211 VAL 211 234 234 VAL VAL A . n A 1 212 TYR 212 235 235 TYR TYR A . n A 1 213 ILE 213 236 236 ILE ILE A . n A 1 214 GLU 214 237 237 GLU GLU A . n A 1 215 ALA 215 238 238 ALA ALA A . n A 1 216 TYR 216 239 239 TYR TYR A . n A 1 217 HIS 217 240 240 HIS HIS A . n A 1 218 THR 218 241 241 THR THR A . n A 1 219 VAL 219 242 242 VAL VAL A . n A 1 220 PRO 220 243 243 PRO PRO A . n A 1 221 LYS 221 244 244 LYS LYS A . n A 1 222 GLY 222 245 245 GLY GLY A . n A 1 223 ARG 223 246 246 ARG ARG A . n A 1 224 CYS 224 247 247 CYS CYS A . n A 1 225 ARG 225 248 248 ARG ARG A . n A 1 226 GLN 226 249 249 GLN GLN A . n A 1 227 VAL 227 250 250 VAL VAL A . n A 1 228 VAL 228 251 251 VAL VAL A . n A 1 229 THR 229 252 252 THR THR A . n A 1 230 GLY 230 253 253 GLY GLY A . n A 1 231 MET 231 254 254 MET MET A . n A 1 232 ALA 232 255 255 ALA ALA A . n A 1 233 TRP 233 256 256 TRP TRP A . n A 1 234 LEU 234 257 257 LEU LEU A . n A 1 235 PHE 235 258 258 PHE PHE A . n A 1 236 PHE 236 259 259 PHE PHE A . n A 1 237 VAL 237 260 260 VAL VAL A . n A 1 238 SER 238 261 261 SER SER A . n A 1 239 TRP 239 262 262 TRP TRP A . n A 1 240 GLY 240 263 263 GLY GLY A . n A 1 241 MET 241 264 264 MET MET A . n A 1 242 PHE 242 265 265 PHE PHE A . n A 1 243 PRO 243 266 266 PRO PRO A . n A 1 244 ILE 244 267 267 ILE ILE A . n A 1 245 LEU 245 268 268 LEU LEU A . n A 1 246 PHE 246 269 269 PHE PHE A . n A 1 247 ILE 247 270 270 ILE ILE A . n A 1 248 LEU 248 271 271 LEU LEU A . n A 1 249 GLY 249 272 272 GLY GLY A . n A 1 250 PRO 250 273 273 PRO PRO A . n A 1 251 GLU 251 274 274 GLU GLU A . n A 1 252 GLY 252 275 275 GLY GLY A . n A 1 253 PHE 253 276 276 PHE PHE A . n A 1 254 GLY 254 277 277 GLY GLY A . n A 1 255 VAL 255 278 278 VAL VAL A . n A 1 256 LEU 256 279 279 LEU LEU A . n A 1 257 SER 257 280 280 SER SER A . n A 1 258 VAL 258 281 281 VAL VAL A . n A 1 259 TYR 259 282 282 TYR TYR A . n A 1 260 GLY 260 283 283 GLY GLY A . n A 1 261 SER 261 284 284 SER SER A . n A 1 262 THR 262 285 285 THR THR A . n A 1 263 VAL 263 286 286 VAL VAL A . n A 1 264 GLY 264 287 287 GLY GLY A . n A 1 265 HIS 265 288 288 HIS HIS A . n A 1 266 THR 266 289 289 THR THR A . n A 1 267 ILE 267 290 290 ILE ILE A . n A 1 268 ILE 268 291 291 ILE ILE A . n A 1 269 ASP 269 292 292 ASP ASP A . n A 1 270 LEU 270 293 293 LEU LEU A . n A 1 271 MET 271 294 294 MET MET A . n A 1 272 SER 272 295 295 SER SER A . n A 1 273 LYS 273 296 296 LYS LYS A . n A 1 274 ASN 274 297 297 ASN ASN A . n A 1 275 CYS 275 298 298 CYS CYS A . n A 1 276 TRP 276 299 299 TRP TRP A . n A 1 277 GLY 277 300 300 GLY GLY A . n A 1 278 LEU 278 301 301 LEU LEU A . n A 1 279 LEU 279 302 302 LEU LEU A . n A 1 280 GLY 280 303 303 GLY GLY A . n A 1 281 HIS 281 304 304 HIS HIS A . n A 1 282 TYR 282 305 305 TYR TYR A . n A 1 283 LEU 283 306 306 LEU LEU A . n A 1 284 ARG 284 307 307 ARG ARG A . n A 1 285 VAL 285 308 308 VAL VAL A . n A 1 286 LEU 286 309 309 LEU LEU A . n A 1 287 ILE 287 310 310 ILE ILE A . n A 1 288 HIS 288 311 311 HIS HIS A . n A 1 289 GLU 289 312 312 GLU GLU A . n A 1 290 HIS 290 313 313 HIS HIS A . n A 1 291 ILE 291 314 314 ILE ILE A . n A 1 292 LEU 292 315 315 LEU LEU A . n A 1 293 ILE 293 316 316 ILE ILE A . n A 1 294 HIS 294 317 317 HIS HIS A . n A 1 295 GLY 295 318 318 GLY GLY A . n A 1 296 ASP 296 319 319 ASP ASP A . n A 1 297 ILE 297 320 320 ILE ILE A . n A 1 298 ARG 298 321 321 ARG ARG A . n A 1 299 LYS 299 322 322 LYS LYS A . n A 1 300 THR 300 323 323 THR THR A . n A 1 301 THR 301 324 324 THR THR A . n A 1 302 LYS 302 325 325 LYS LYS A . n A 1 303 LEU 303 326 326 LEU LEU A . n A 1 304 ASN 304 327 ? ? ? A . n A 1 305 ILE 305 328 ? ? ? A . n A 1 306 GLY 306 329 ? ? ? A . n A 1 307 GLY 307 330 ? ? ? A . n A 1 308 THR 308 331 ? ? ? A . n A 1 309 GLU 309 332 ? ? ? A . n A 1 310 ILE 310 333 333 ILE ILE A . n A 1 311 GLU 311 334 334 GLU GLU A . n A 1 312 VAL 312 335 335 VAL VAL A . n A 1 313 GLU 313 336 336 GLU GLU A . n A 1 314 THR 314 337 337 THR THR A . n A 1 315 LEU 315 338 338 LEU LEU A . n A 1 316 VAL 316 339 339 VAL VAL A . n A 1 317 GLU 317 340 340 GLU GLU A . n A 1 318 ASP 318 341 341 ASP ASP A . n A 1 319 GLU 319 342 342 GLU GLU A . n A 1 320 ALA 320 343 ? ? ? A . n A 1 321 GLU 321 344 ? ? ? A . n A 1 322 ALA 322 345 ? ? ? A . n A 1 323 GLY 323 346 ? ? ? A . n A 1 324 ALA 324 347 ? ? ? A . n A 1 325 VAL 325 348 ? ? ? A . n A 1 326 SER 326 349 ? ? ? A . n A 1 327 SER 327 350 ? ? ? A . n A 1 328 GLU 328 351 ? ? ? A . n A 1 329 ASP 329 352 ? ? ? A . n A 1 330 LEU 330 353 ? ? ? A . n A 1 331 TYR 331 354 ? ? ? A . n A 1 332 PHE 332 355 ? ? ? A . n A 1 333 GLN 333 356 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RET 1 401 1 RET RET A . C 3 OLA 1 501 1 OLA OLA A . D 3 OLA 1 502 2 OLA OLA A . E 3 OLA 1 503 3 OLA OLA A . F 3 OLA 1 504 4 OLA OLA A . G 3 OLA 1 505 5 OLA OLA A . H 3 OLA 1 506 6 OLA OLA A . I 4 HOH 1 601 1 HOH HOH A . I 4 HOH 2 602 2 HOH HOH A . I 4 HOH 3 603 3 HOH HOH A . I 4 HOH 4 604 4 HOH HOH A . I 4 HOH 5 605 5 HOH HOH A . I 4 HOH 6 606 6 HOH HOH A . I 4 HOH 7 607 7 HOH HOH A . I 4 HOH 8 608 8 HOH HOH A . I 4 HOH 9 609 9 HOH HOH A . I 4 HOH 10 610 10 HOH HOH A . I 4 HOH 11 611 11 HOH HOH A . I 4 HOH 12 612 12 HOH HOH A . I 4 HOH 13 613 13 HOH HOH A . I 4 HOH 14 614 14 HOH HOH A . I 4 HOH 15 615 15 HOH HOH A . I 4 HOH 16 616 16 HOH HOH A . I 4 HOH 17 617 17 HOH HOH A . I 4 HOH 18 618 18 HOH HOH A . I 4 HOH 19 619 19 HOH HOH A . I 4 HOH 20 620 20 HOH HOH A . I 4 HOH 21 621 21 HOH HOH A . I 4 HOH 22 622 22 HOH HOH A . I 4 HOH 23 623 23 HOH HOH A . I 4 HOH 24 624 24 HOH HOH A . I 4 HOH 25 625 25 HOH HOH A . I 4 HOH 26 626 26 HOH HOH A . I 4 HOH 27 627 27 HOH HOH A . I 4 HOH 28 628 28 HOH HOH A . I 4 HOH 29 629 29 HOH HOH A . I 4 HOH 30 630 30 HOH HOH A . I 4 HOH 31 631 31 HOH HOH A . I 4 HOH 32 632 32 HOH HOH A . I 4 HOH 33 633 33 HOH HOH A . I 4 HOH 34 634 34 HOH HOH A . I 4 HOH 35 635 35 HOH HOH A . I 4 HOH 36 636 36 HOH HOH A . I 4 HOH 37 637 37 HOH HOH A . I 4 HOH 38 638 38 HOH HOH A . I 4 HOH 39 639 39 HOH HOH A . I 4 HOH 40 640 40 HOH HOH A . I 4 HOH 41 641 41 HOH HOH A . I 4 HOH 42 642 42 HOH HOH A . I 4 HOH 43 643 43 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 11310 ? 1 MORE 0 ? 1 'SSA (A^2)' 21570 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_555 -x,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 45.0245000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-01-25 2 'Structure model' 1 1 2012-02-01 3 'Structure model' 1 2 2012-02-22 4 'Structure model' 1 3 2012-06-27 5 'Structure model' 1 4 2017-08-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Structure summary' 4 5 'Structure model' 'Refinement description' 5 5 'Structure model' 'Source and taxonomy' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' entity_src_gen 2 5 'Structure model' software # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 5 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_software.classification' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 11.9067 21.1278 17.7379 0.2890 0.3128 0.5556 -0.0090 -0.0368 0.0215 0.3306 0.2033 0.3972 -0.0954 -0.3052 -0.1755 -0.0752 -0.0444 -0.0002 -0.0048 -0.2926 -0.7804 0.0521 0.0152 0.0249 'X-RAY DIFFRACTION' 2 ? refined -0.2448 41.3803 13.7198 0.3153 0.3025 0.2196 -0.0281 -0.0383 0.0073 0.3886 0.1729 0.1863 -0.1300 -0.2106 -0.0415 -0.0262 0.0847 0.0000 0.1264 0.0351 0.0780 -0.2427 -0.0422 0.0053 'X-RAY DIFFRACTION' 3 ? refined 10.0656 46.9462 7.7670 0.3281 0.2847 0.2553 -0.0612 0.0509 -0.0123 1.1548 0.3542 0.1438 0.1367 0.4471 -0.0759 -0.1569 0.1859 0.0000 0.1671 0.1571 0.0727 -0.2838 -0.0590 0.0812 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 49 A 156 ;chain 'A' and (resseq 49:156) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 157 A 241 ;chain 'A' and (resseq 157:241) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 242 A 401 ;chain 'A' and (resseq 242:342) or chain 'A' and (resseq 401) ; ? ? ? ? ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 PHENIX 1.7.2_869 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 3 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 XDS . ? ? ? ? 'data reduction' ? ? ? 5 XDS . ? ? ? ? 'data scaling' ? ? ? 6 MOLREP . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 176 ? ? -142.31 56.91 2 1 TYR A 184 ? ? -37.22 121.74 3 1 ASN A 185 ? ? -120.42 -168.97 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 ALA _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 181 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 ASN _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 182 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 149.38 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 49 ? CG ? A ARG 26 CG 2 1 Y 1 A ARG 49 ? CD ? A ARG 26 CD 3 1 Y 1 A ARG 49 ? NE ? A ARG 26 NE 4 1 Y 1 A ARG 49 ? CZ ? A ARG 26 CZ 5 1 Y 1 A ARG 49 ? NH1 ? A ARG 26 NH1 6 1 Y 1 A ARG 49 ? NH2 ? A ARG 26 NH2 7 1 Y 1 A MET 50 ? CG ? A MET 27 CG 8 1 Y 1 A MET 50 ? SD ? A MET 27 SD 9 1 Y 1 A MET 50 ? CE ? A MET 27 CE 10 1 Y 1 A LEU 51 ? CG ? A LEU 28 CG 11 1 Y 1 A LEU 51 ? CD1 ? A LEU 28 CD1 12 1 Y 1 A LEU 51 ? CD2 ? A LEU 28 CD2 13 1 Y 1 A LYS 80 ? CD ? A LYS 57 CD 14 1 Y 1 A LYS 80 ? CE ? A LYS 57 CE 15 1 Y 1 A LYS 80 ? NZ ? A LYS 57 NZ 16 1 Y 1 A CYS 118 ? SG ? A CYS 95 SG 17 1 Y 1 A ASN 182 ? CG ? A ASN 159 CG 18 1 Y 1 A ASN 182 ? OD1 ? A ASN 159 OD1 19 1 Y 1 A ASN 182 ? ND2 ? A ASN 159 ND2 20 1 Y 1 A LYS 186 ? CG ? A LYS 163 CG 21 1 Y 1 A LYS 186 ? CD ? A LYS 163 CD 22 1 Y 1 A LYS 186 ? CE ? A LYS 163 CE 23 1 Y 1 A LYS 186 ? NZ ? A LYS 163 NZ 24 1 Y 1 A TYR 211 ? CG ? A TYR 188 CG 25 1 Y 1 A TYR 211 ? CD1 ? A TYR 188 CD1 26 1 Y 1 A TYR 211 ? CD2 ? A TYR 188 CD2 27 1 Y 1 A TYR 211 ? CE1 ? A TYR 188 CE1 28 1 Y 1 A TYR 211 ? CE2 ? A TYR 188 CE2 29 1 Y 1 A TYR 211 ? CZ ? A TYR 188 CZ 30 1 Y 1 A TYR 211 ? OH ? A TYR 188 OH 31 1 Y 1 A LYS 244 ? CG ? A LYS 221 CG 32 1 Y 1 A LYS 244 ? CD ? A LYS 221 CD 33 1 Y 1 A LYS 244 ? CE ? A LYS 221 CE 34 1 Y 1 A LYS 244 ? NZ ? A LYS 221 NZ 35 1 Y 1 A ARG 246 ? NE ? A ARG 223 NE 36 1 Y 1 A ARG 246 ? CZ ? A ARG 223 CZ 37 1 Y 1 A ARG 246 ? NH1 ? A ARG 223 NH1 38 1 Y 1 A ARG 246 ? NH2 ? A ARG 223 NH2 39 1 Y 1 A LYS 322 ? CG ? A LYS 299 CG 40 1 Y 1 A LYS 322 ? CD ? A LYS 299 CD 41 1 Y 1 A LYS 322 ? CE ? A LYS 299 CE 42 1 Y 1 A LYS 322 ? NZ ? A LYS 299 NZ 43 1 Y 1 A LYS 325 ? CG ? A LYS 302 CG 44 1 Y 1 A LYS 325 ? CD ? A LYS 302 CD 45 1 Y 1 A LYS 325 ? CE ? A LYS 302 CE 46 1 Y 1 A LYS 325 ? NZ ? A LYS 302 NZ 47 1 Y 1 A ILE 333 ? CG1 ? A ILE 310 CG1 48 1 Y 1 A ILE 333 ? CG2 ? A ILE 310 CG2 49 1 Y 1 A ILE 333 ? CD1 ? A ILE 310 CD1 50 1 Y 1 A GLU 334 ? CG ? A GLU 311 CG 51 1 Y 1 A GLU 334 ? CD ? A GLU 311 CD 52 1 Y 1 A GLU 334 ? OE1 ? A GLU 311 OE1 53 1 Y 1 A GLU 334 ? OE2 ? A GLU 311 OE2 54 1 Y 1 A ASP 341 ? CG ? A ASP 318 CG 55 1 Y 1 A ASP 341 ? OD1 ? A ASP 318 OD1 56 1 Y 1 A ASP 341 ? OD2 ? A ASP 318 OD2 57 1 Y 1 A GLU 342 ? CG ? A GLU 319 CG 58 1 Y 1 A GLU 342 ? CD ? A GLU 319 CD 59 1 Y 1 A GLU 342 ? OE1 ? A GLU 319 OE1 60 1 Y 1 A GLU 342 ? OE2 ? A GLU 319 OE2 61 1 N 1 A OLA 501 ? C12 ? C OLA 1 C12 62 1 N 1 A OLA 501 ? C13 ? C OLA 1 C13 63 1 N 1 A OLA 501 ? C14 ? C OLA 1 C14 64 1 N 1 A OLA 501 ? C15 ? C OLA 1 C15 65 1 N 1 A OLA 501 ? C16 ? C OLA 1 C16 66 1 N 1 A OLA 501 ? C17 ? C OLA 1 C17 67 1 N 1 A OLA 501 ? C18 ? C OLA 1 C18 68 1 N 1 A OLA 502 ? C13 ? D OLA 1 C13 69 1 N 1 A OLA 502 ? C14 ? D OLA 1 C14 70 1 N 1 A OLA 502 ? C15 ? D OLA 1 C15 71 1 N 1 A OLA 502 ? C16 ? D OLA 1 C16 72 1 N 1 A OLA 502 ? C17 ? D OLA 1 C17 73 1 N 1 A OLA 502 ? C18 ? D OLA 1 C18 74 1 N 1 A OLA 503 ? C1 ? E OLA 1 C1 75 1 N 1 A OLA 503 ? O1 ? E OLA 1 O1 76 1 N 1 A OLA 503 ? O2 ? E OLA 1 O2 77 1 N 1 A OLA 503 ? C11 ? E OLA 1 C11 78 1 N 1 A OLA 503 ? C12 ? E OLA 1 C12 79 1 N 1 A OLA 503 ? C13 ? E OLA 1 C13 80 1 N 1 A OLA 503 ? C14 ? E OLA 1 C14 81 1 N 1 A OLA 503 ? C15 ? E OLA 1 C15 82 1 N 1 A OLA 503 ? C16 ? E OLA 1 C16 83 1 N 1 A OLA 503 ? C17 ? E OLA 1 C17 84 1 N 1 A OLA 503 ? C18 ? E OLA 1 C18 85 1 N 1 A OLA 504 ? C12 ? F OLA 1 C12 86 1 N 1 A OLA 504 ? C13 ? F OLA 1 C13 87 1 N 1 A OLA 504 ? C14 ? F OLA 1 C14 88 1 N 1 A OLA 504 ? C15 ? F OLA 1 C15 89 1 N 1 A OLA 504 ? C16 ? F OLA 1 C16 90 1 N 1 A OLA 504 ? C17 ? F OLA 1 C17 91 1 N 1 A OLA 504 ? C18 ? F OLA 1 C18 92 1 N 1 A OLA 505 ? O1 ? G OLA 1 O1 93 1 N 1 A OLA 505 ? O2 ? G OLA 1 O2 94 1 N 1 A OLA 505 ? C11 ? G OLA 1 C11 95 1 N 1 A OLA 505 ? C12 ? G OLA 1 C12 96 1 N 1 A OLA 505 ? C13 ? G OLA 1 C13 97 1 N 1 A OLA 505 ? C14 ? G OLA 1 C14 98 1 N 1 A OLA 505 ? C15 ? G OLA 1 C15 99 1 N 1 A OLA 505 ? C16 ? G OLA 1 C16 100 1 N 1 A OLA 505 ? C17 ? G OLA 1 C17 101 1 N 1 A OLA 505 ? C18 ? G OLA 1 C18 102 1 N 1 A OLA 506 ? C1 ? H OLA 1 C1 103 1 N 1 A OLA 506 ? O1 ? H OLA 1 O1 104 1 N 1 A OLA 506 ? O2 ? H OLA 1 O2 105 1 N 1 A OLA 506 ? C2 ? H OLA 1 C2 106 1 N 1 A OLA 506 ? C3 ? H OLA 1 C3 107 1 N 1 A OLA 506 ? C4 ? H OLA 1 C4 108 1 N 1 A OLA 506 ? C5 ? H OLA 1 C5 109 1 N 1 A OLA 506 ? C6 ? H OLA 1 C6 110 1 N 1 A OLA 506 ? C7 ? H OLA 1 C7 111 1 N 1 A OLA 506 ? C8 ? H OLA 1 C8 112 1 N 1 A OLA 506 ? C9 ? H OLA 1 C9 113 1 N 1 A OLA 506 ? C16 ? H OLA 1 C16 114 1 N 1 A OLA 506 ? C17 ? H OLA 1 C17 115 1 N 1 A OLA 506 ? C18 ? H OLA 1 C18 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 24 ? A SER 1 2 1 Y 1 A THR 25 ? A THR 2 3 1 Y 1 A GLY 26 ? A GLY 3 4 1 Y 1 A SER 27 ? A SER 4 5 1 Y 1 A ASP 28 ? A ASP 5 6 1 Y 1 A ALA 29 ? A ALA 6 7 1 Y 1 A THR 30 ? A THR 7 8 1 Y 1 A VAL 31 ? A VAL 8 9 1 Y 1 A PRO 32 ? A PRO 9 10 1 Y 1 A VAL 33 ? A VAL 10 11 1 Y 1 A ALA 34 ? A ALA 11 12 1 Y 1 A THR 35 ? A THR 12 13 1 Y 1 A GLN 36 ? A GLN 13 14 1 Y 1 A ASP 37 ? A ASP 14 15 1 Y 1 A GLY 38 ? A GLY 15 16 1 Y 1 A PRO 39 ? A PRO 16 17 1 Y 1 A ASP 40 ? A ASP 17 18 1 Y 1 A TYR 41 ? A TYR 18 19 1 Y 1 A VAL 42 ? A VAL 19 20 1 Y 1 A PHE 43 ? A PHE 20 21 1 Y 1 A HIS 44 ? A HIS 21 22 1 Y 1 A ARG 45 ? A ARG 22 23 1 Y 1 A ALA 46 ? A ALA 23 24 1 Y 1 A HIS 47 ? A HIS 24 25 1 Y 1 A GLU 48 ? A GLU 25 26 1 Y 1 A GLY 110 ? A GLY 87 27 1 Y 1 A TYR 111 ? A TYR 88 28 1 Y 1 A GLN 112 ? A GLN 89 29 1 Y 1 A THR 113 ? A THR 90 30 1 Y 1 A TRP 114 ? A TRP 91 31 1 Y 1 A LYS 115 ? A LYS 92 32 1 Y 1 A SER 116 ? A SER 93 33 1 Y 1 A THR 117 ? A THR 94 34 1 Y 1 A ASN 327 ? A ASN 304 35 1 Y 1 A ILE 328 ? A ILE 305 36 1 Y 1 A GLY 329 ? A GLY 306 37 1 Y 1 A GLY 330 ? A GLY 307 38 1 Y 1 A THR 331 ? A THR 308 39 1 Y 1 A GLU 332 ? A GLU 309 40 1 Y 1 A ALA 343 ? A ALA 320 41 1 Y 1 A GLU 344 ? A GLU 321 42 1 Y 1 A ALA 345 ? A ALA 322 43 1 Y 1 A GLY 346 ? A GLY 323 44 1 Y 1 A ALA 347 ? A ALA 324 45 1 Y 1 A VAL 348 ? A VAL 325 46 1 Y 1 A SER 349 ? A SER 326 47 1 Y 1 A SER 350 ? A SER 327 48 1 Y 1 A GLU 351 ? A GLU 328 49 1 Y 1 A ASP 352 ? A ASP 329 50 1 Y 1 A LEU 353 ? A LEU 330 51 1 Y 1 A TYR 354 ? A TYR 331 52 1 Y 1 A PHE 355 ? A PHE 332 53 1 Y 1 A GLN 356 ? A GLN 333 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 RETINAL RET 3 'OLEIC ACID' OLA 4 water HOH #