HEADER ISOMERASE 04-NOV-11 3UI6 TITLE 0.89 A RESOLUTION CRYSTAL STRUCTURE OF HUMAN PARVULIN 14 IN COMPLEX TITLE 2 WITH OXIDIZED DTT COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 4; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PARVULIN-14, PAR14, HPAR14, PARVULIN-17, PAR17, HPAR17, COMPND 5 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PIN4, PPIASE PIN4, PEPTIDYL- COMPND 6 PROLYL CIS/TRANS ISOMERASE EPVH, HEPVH, ROTAMASE PIN4; COMPND 7 EC: 5.2.1.8; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PIN4, Q9Y237; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-41 KEYWDS PEPTIDYL-PROLYL-ISOMERASE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.W.MUELLER,N.M.LINK,A.MATENA,L.HOPPSTOCK,A.RUEPPEL,P.BAYER, AUTHOR 2 W.BLANKENFELDT REVDAT 4 28-FEB-24 3UI6 1 REMARK SEQADV LINK REVDAT 3 31-JAN-18 3UI6 1 JRNL REVDAT 2 05-DEC-12 3UI6 1 AUTHOR REVDAT 1 07-NOV-12 3UI6 0 JRNL AUTH J.W.MUELLER,N.M.LINK,A.MATENA,L.HOPPSTOCK,A.RUEPPEL,P.BAYER, JRNL AUTH 2 W.BLANKENFELDT JRNL TITL 0.89 A RESOLUTION CRYSTAL STRUCTURE OF HUMAN PARVULIN 14 IN JRNL TITL 2 COMPLEX WITH OXIDIZED DTT JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 0.89 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0077 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 0.89 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.84 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 64298 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.103 REMARK 3 R VALUE (WORKING SET) : 0.103 REMARK 3 FREE R VALUE : 0.116 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3259 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 0.89 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 0.91 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4193 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.06 REMARK 3 BIN R VALUE (WORKING SET) : 0.1620 REMARK 3 BIN FREE R VALUE SET COUNT : 203 REMARK 3 BIN FREE R VALUE : 0.1810 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 778 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 190 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 7.48 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 9.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.06000 REMARK 3 B22 (A**2) : 0.04000 REMARK 3 B33 (A**2) : 0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.014 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.007 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.247 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.983 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.980 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 911 ; 0.027 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 667 ; 0.010 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1238 ; 3.017 ; 2.008 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1636 ; 1.760 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 125 ; 6.549 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 36 ;34.428 ;23.611 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 185 ;13.182 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;11.501 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 130 ; 0.438 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 993 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 176 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5235 ;11.369 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 192 ;21.727 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 1552 ; 5.725 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 3UI6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-NOV-11. REMARK 100 THE DEPOSITION ID IS D_1000068785. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-SEP-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.82656 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64302 REMARK 200 RESOLUTION RANGE HIGH (A) : 0.890 REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.9100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 0.89 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 0.99 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.20200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 8.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS, 2.5 M (NH4)2SO4, 3-20 MM REMARK 280 ALA-PRO, PH 8.0, VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 17.12000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 25.92500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.51000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 25.92500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 17.12000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 23.51000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 107 O HOH A 5178 1.36 REMARK 500 O HOH A 5089 O HOH A 5103 1.56 REMARK 500 O HOH A 5069 O HOH A 5126 1.57 REMARK 500 O4 SO4 A 2004 O HOH A 5171 1.64 REMARK 500 O HOH A 5052 O HOH A 5170 1.70 REMARK 500 O HOH A 5088 O HOH A 5128 1.82 REMARK 500 NH2 ARG A 63 O HOH A 5186 1.91 REMARK 500 O HOH A 5081 O HOH A 5098 1.98 REMARK 500 O HOH A 5042 O HOH A 5187 2.00 REMARK 500 O HOH A 5128 O HOH A 5171 2.03 REMARK 500 O3 D1D A 2006 O HOH A 5156 2.06 REMARK 500 O HOH A 5132 O HOH A 5165 2.14 REMARK 500 CG ASP A 107 O HOH A 5178 2.14 REMARK 500 O HOH A 5123 O HOH A 5171 2.15 REMARK 500 OE1 GLU A 96 O HOH A 5152 2.16 REMARK 500 O HOH A 5188 O HOH A 5189 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 5040 O HOH A 5173 3544 1.33 REMARK 500 CD LYS A 108 O HOH A 5160 4445 2.02 REMARK 500 O HOH A 5020 O HOH A 5173 3544 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 119 CE LYS A 119 NZ -0.185 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 63 NE - CZ - NH1 ANGL. DEV. = 9.2 DEGREES REMARK 500 ARG A 63 NE - CZ - NH2 ANGL. DEV. = -8.3 DEGREES REMARK 500 ARG A 87 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 MET A 106 CG - SD - CE ANGL. DEV. = -19.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A2008 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A5114 O REMARK 620 2 HOH A5149 O 112.3 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE D1D A 2006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 2007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 2008 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3UI4 RELATED DB: PDB REMARK 900 RELATED ID: 3UI5 RELATED DB: PDB DBREF 3UI6 A 36 131 UNP Q9Y237 PIN4_HUMAN 36 131 SEQADV 3UI6 GLY A -4 UNP Q9Y237 EXPRESSION TAG SEQADV 3UI6 PRO A -3 UNP Q9Y237 EXPRESSION TAG SEQADV 3UI6 MET A -2 UNP Q9Y237 EXPRESSION TAG SEQADV 3UI6 GLY A -1 UNP Q9Y237 EXPRESSION TAG SEQADV 3UI6 SER A 0 UNP Q9Y237 EXPRESSION TAG SEQRES 1 A 101 GLY PRO MET GLY SER ASN ALA VAL LYS VAL ARG HIS ILE SEQRES 2 A 101 LEU CYS GLU LYS HIS GLY LYS ILE MET GLU ALA MET GLU SEQRES 3 A 101 LYS LEU LYS SER GLY MET ARG PHE ASN GLU VAL ALA ALA SEQRES 4 A 101 GLN TYR SER GLU ASP LYS ALA ARG GLN GLY GLY ASP LEU SEQRES 5 A 101 GLY TRP MET THR ARG GLY SER MET VAL GLY PRO PHE GLN SEQRES 6 A 101 GLU ALA ALA PHE ALA LEU PRO VAL SER GLY MET ASP LYS SEQRES 7 A 101 PRO VAL PHE THR ASP PRO PRO VAL LYS THR LYS PHE GLY SEQRES 8 A 101 TYR HIS ILE ILE MET VAL GLU GLY ARG LYS HET SO4 A2001 5 HET SO4 A2002 5 HET SO4 A2003 5 HET SO4 A2004 5 HET SO4 A2005 5 HET D1D A2006 8 HET NA A2007 1 HET NA A2008 1 HETNAM SO4 SULFATE ION HETNAM D1D (4S,5S)-1,2-DITHIANE-4,5-DIOL HETNAM NA SODIUM ION FORMUL 2 SO4 5(O4 S 2-) FORMUL 7 D1D C4 H8 O2 S2 FORMUL 8 NA 2(NA 1+) FORMUL 10 HOH *190(H2 O) HELIX 1 1 GLY A -4 SER A 0 5 5 HELIX 2 2 LYS A 47 SER A 60 1 14 HELIX 3 3 ARG A 63 SER A 72 1 10 HELIX 4 4 LYS A 75 GLY A 79 5 5 HELIX 5 5 VAL A 91 ALA A 100 1 10 SHEET 1 A 4 ASP A 81 THR A 86 0 SHEET 2 A 4 ALA A 37 CYS A 45 -1 N VAL A 38 O MET A 85 SHEET 3 A 4 GLY A 121 ARG A 130 -1 O TYR A 122 N CYS A 45 SHEET 4 A 4 VAL A 116 THR A 118 -1 N VAL A 116 O HIS A 123 LINK NA NA A2007 O HOH A5094 1555 1555 3.08 LINK NA NA A2008 O HOH A5114 1555 1555 2.67 LINK NA NA A2008 O HOH A5149 1555 1555 2.74 CISPEP 1 ASP A 113 PRO A 114 0 15.27 SITE 1 AC1 11 ASP A 74 LYS A 75 ALA A 76 ARG A 77 SITE 2 AC1 11 HOH A5007 HOH A5023 HOH A5039 HOH A5054 SITE 3 AC1 11 HOH A5060 HOH A5073 HOH A5135 SITE 1 AC2 9 GLY A 83 TRP A 84 VAL A 91 GLY A 92 SITE 2 AC2 9 HOH A5049 HOH A5100 HOH A5105 HOH A5114 SITE 3 AC2 9 HOH A5172 SITE 1 AC3 6 ARG A 87 GLN A 95 HOH A5026 HOH A5034 SITE 2 AC3 6 HOH A5066 HOH A5144 SITE 1 AC4 10 GLY A 105 MET A 106 ASP A 107 LYS A 108 SITE 2 AC4 10 LYS A 117 HOH A5028 HOH A5051 HOH A5123 SITE 3 AC4 10 HOH A5167 HOH A5171 SITE 1 AC5 6 LYS A 47 GLY A 49 LYS A 50 HOH A5027 SITE 2 AC5 6 HOH A5067 HOH A5140 SITE 1 AC6 8 HIS A 42 ASP A 74 TRP A 84 MET A 85 SITE 2 AC6 8 PHE A 120 HIS A 123 LYS A 131 HOH A5156 SITE 1 AC7 5 HIS A 48 LYS A 59 ASP A 107 HOH A5094 SITE 2 AC7 5 HOH A5117 SITE 1 AC8 6 VAL A 91 PRO A 93 THR A 118 LYS A 119 SITE 2 AC8 6 HOH A5114 HOH A5149 CRYST1 34.240 47.020 51.850 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.029206 0.000000 0.000000 0.00000 SCALE2 0.000000 0.021268 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019286 0.00000