HEADER TRANSPORT PROTEIN 08-NOV-11 3UK0 TITLE RPD_1889 PROTEIN, AN EXTRACELLULAR LIGAND-BINDING RECEPTOR FROM TITLE 2 RHODOPSEUDOMONAS PALUSTRIS. COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXTRACELLULAR LIGAND-BINDING RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOPSEUDOMONAS PALUSTRIS; SOURCE 3 ORGANISM_TAXID: 316057; SOURCE 4 STRAIN: BISB5; SOURCE 5 GENE: RPD_1889; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, MCSG, AMINO-ACID TRANSPORT, EXTRACELLULAR RECEPTOR, KEYWDS 3 TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.OSIPIUK,J.MACK,S.ZERBS,F.COLLART,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 4 08-NOV-17 3UK0 1 REMARK REVDAT 3 25-SEP-13 3UK0 1 JRNL REVDAT 2 15-MAY-13 3UK0 1 JRNL REVDAT 1 23-NOV-11 3UK0 0 SPRSDE 23-NOV-11 3UK0 3SNR JRNL AUTH K.TAN,C.CHANG,M.CUFF,J.OSIPIUK,E.LANDORF,J.C.MACK,S.ZERBS, JRNL AUTH 2 A.JOACHIMIAK,F.R.COLLART JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF SOLUTE BINDING JRNL TITL 2 PROTEINS FOR AROMATIC COMPOUNDS DERIVED FROM LIGNIN: JRNL TITL 3 P-COUMARIC ACID AND RELATED AROMATIC ACIDS. JRNL REF PROTEINS V. 81 1709 2013 JRNL REFN ISSN 0887-3585 JRNL PMID 23606130 JRNL DOI 10.1002/PROT.24305 REMARK 2 REMARK 2 RESOLUTION. 1.49 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.49 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 53356 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.139 REMARK 3 R VALUE (WORKING SET) : 0.136 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2698 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.49 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.53 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2888 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.77 REMARK 3 BIN R VALUE (WORKING SET) : 0.2480 REMARK 3 BIN FREE R VALUE SET COUNT : 166 REMARK 3 BIN FREE R VALUE : 0.3480 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2716 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 31 REMARK 3 SOLVENT ATOMS : 268 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.17000 REMARK 3 B22 (A**2) : 2.38000 REMARK 3 B33 (A**2) : -1.21000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.074 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.057 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.466 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.980 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.968 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2951 ; 0.015 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2045 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4032 ; 1.648 ; 1.992 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5055 ; 0.986 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 402 ; 5.544 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 113 ;33.624 ;24.248 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 534 ;14.950 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;17.747 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 465 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3293 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 557 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4996 ; 4.291 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 76 ;27.716 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 5115 ;15.749 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 3UK0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-NOV-11. REMARK 100 THE DEPOSITION ID IS D_1000068851. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53560 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.490 REMARK 200 RESOLUTION RANGE LOW (A) : 42.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 13.10 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.49 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.52 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.2 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.63800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.070 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, MLPHARE, DM, SOLVE, RESOLVE, HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM SULFATE, 20% PEG-4000, REMARK 280 10% GLYCEROL, PH 7.4, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.63600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.50100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.78900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.50100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.63600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.78900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 24 REMARK 465 ASN A 25 REMARK 465 ALA A 26 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 252 NH2 ARG A 255 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 246 CG HIS A 246 CD2 0.058 REMARK 500 HIS A 309 CG HIS A 309 CD2 0.061 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 131 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 99 -156.34 -104.48 REMARK 500 ASP A 273 71.29 -151.65 REMARK 500 ASP A 367 -155.64 -137.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ENO A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 505 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC102214 RELATED DB: TARGETDB DBREF 3UK0 A 26 385 UNP Q139W5 Q139W5_RHOPS 26 385 SEQADV 3UK0 SER A 24 UNP Q139W5 EXPRESSION TAG SEQADV 3UK0 ASN A 25 UNP Q139W5 EXPRESSION TAG SEQRES 1 A 362 SER ASN ALA GLU THR ASN GLU ILE THR VAL GLY ILE SER SEQRES 2 A 362 VAL THR THR THR GLY PRO ALA ALA ALA LEU GLY ILE PRO SEQRES 3 A 362 GLU ARG ASN ALA LEU GLU PHE VAL VAL LYS GLU ILE SER SEQRES 4 A 362 GLY HIS PRO ILE LYS ILE ILE VAL LEU ASP ASP GLY GLY SEQRES 5 A 362 ASP PRO THR ALA ALA THR THR ASN ALA ARG ARG PHE VAL SEQRES 6 A 362 THR GLU SER LYS ALA ASP VAL ILE MSE GLY SER SER VAL SEQRES 7 A 362 THR PRO PRO SER VAL ALA ILE SER ASN VAL ALA ASN GLU SEQRES 8 A 362 ALA GLN ILE PRO HIS ILE ALA LEU ALA PRO LEU PRO ILE SEQRES 9 A 362 THR PRO GLU ARG ALA LYS TRP SER VAL VAL MSE PRO GLN SEQRES 10 A 362 PRO ILE PRO ILE MSE GLY LYS VAL LEU TYR GLU HIS MSE SEQRES 11 A 362 LYS LYS ASN ASN VAL LYS THR VAL GLY TYR ILE GLY TYR SEQRES 12 A 362 SER ASP SER TYR GLY ASP LEU TRP PHE ASN ASP LEU LYS SEQRES 13 A 362 LYS GLN GLY GLU ALA MSE GLY LEU LYS ILE VAL GLY GLU SEQRES 14 A 362 GLU ARG PHE ALA ARG PRO ASP THR SER VAL ALA GLY GLN SEQRES 15 A 362 ALA LEU LYS LEU VAL ALA ALA ASN PRO ASP ALA ILE LEU SEQRES 16 A 362 VAL GLY ALA SER GLY THR ALA ALA ALA LEU PRO GLN THR SEQRES 17 A 362 THR LEU ARG GLU ARG GLY TYR ASN GLY LEU ILE TYR GLN SEQRES 18 A 362 THR HIS GLY ALA ALA SER MSE ASP PHE ILE ARG ILE ALA SEQRES 19 A 362 GLY LYS SER ALA GLU GLY VAL LEU MSE ALA SER GLY PRO SEQRES 20 A 362 VAL MSE ASP PRO GLU GLY GLN ASP ASP THR ALA LEU THR SEQRES 21 A 362 LYS LYS PRO GLY MSE ALA LEU VAL LYS VAL TYR GLU GLU SEQRES 22 A 362 LYS TYR GLY PRO SER SER ARG SER GLN PHE ALA GLY HIS SEQRES 23 A 362 SER TYR ASP ALA PHE LYS VAL LEU GLU ARG VAL VAL PRO SEQRES 24 A 362 VAL ALA LEU LYS LYS ALA LYS PRO GLY THR GLN GLU PHE SEQRES 25 A 362 ARG GLU ALA LEU ARG GLU ALA PHE LEU THR GLU LYS ASP SEQRES 26 A 362 ILE ALA ALA SER GLN GLY VAL TYR ASN PHE THR GLU THR SEQRES 27 A 362 ASP ARG TYR GLY LEU ASP ASP ARG SER ARG ILE LEU LEU SEQRES 28 A 362 THR VAL LYS ASN GLY LYS TYR VAL ILE VAL LYS MODRES 3UK0 MSE A 97 MET SELENOMETHIONINE MODRES 3UK0 MSE A 138 MET SELENOMETHIONINE MODRES 3UK0 MSE A 145 MET SELENOMETHIONINE MODRES 3UK0 MSE A 153 MET SELENOMETHIONINE MODRES 3UK0 MSE A 185 MET SELENOMETHIONINE MODRES 3UK0 MSE A 251 MET SELENOMETHIONINE MODRES 3UK0 MSE A 266 MET SELENOMETHIONINE MODRES 3UK0 MSE A 272 MET SELENOMETHIONINE MODRES 3UK0 MSE A 288 MET SELENOMETHIONINE HET MSE A 97 13 HET MSE A 138 8 HET MSE A 145 8 HET MSE A 153 8 HET MSE A 185 8 HET MSE A 251 13 HET MSE A 266 8 HET MSE A 272 8 HET MSE A 288 8 HET ENO A 501 13 HET SO4 A 502 5 HET SO4 A 503 5 HET EDO A 504 4 HET EDO A 505 4 HETNAM MSE SELENOMETHIONINE HETNAM ENO 3-(4-HYDROXY-PHENYL)PYRUVIC ACID HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN ENO HPP HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 2 ENO C9 H8 O4 FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 EDO 2(C2 H6 O2) FORMUL 7 HOH *268(H2 O) HELIX 1 1 ALA A 43 ALA A 53 1 11 HELIX 2 2 LEU A 54 VAL A 57 5 4 HELIX 3 3 ASP A 76 GLU A 90 1 15 HELIX 4 4 VAL A 101 GLN A 116 1 16 HELIX 5 5 PRO A 141 ASN A 156 1 16 HELIX 6 6 ASP A 168 MSE A 185 1 18 HELIX 7 7 VAL A 202 ASN A 213 1 12 HELIX 8 8 SER A 222 ARG A 236 1 15 HELIX 9 9 HIS A 246 ALA A 249 5 4 HELIX 10 10 SER A 250 GLY A 258 1 9 HELIX 11 11 LYS A 259 GLU A 262 5 4 HELIX 12 12 GLY A 269 ASP A 273 5 5 HELIX 13 13 THR A 283 GLY A 299 1 17 HELIX 14 14 SER A 304 LYS A 326 1 23 HELIX 15 15 THR A 332 GLU A 346 1 15 HELIX 16 16 ASP A 367 ARG A 371 5 5 SHEET 1 A 6 GLU A 60 ILE A 61 0 SHEET 2 A 6 HIS A 64 ASP A 72 -1 O HIS A 64 N ILE A 61 SHEET 3 A 6 ILE A 31 VAL A 37 1 N ILE A 35 O ILE A 69 SHEET 4 A 6 VAL A 95 GLY A 98 1 O MSE A 97 N SER A 36 SHEET 5 A 6 HIS A 119 ALA A 121 1 O ILE A 120 N ILE A 96 SHEET 6 A 6 SER A 135 VAL A 137 1 O VAL A 136 N ALA A 121 SHEET 1 B 7 LYS A 188 PHE A 195 0 SHEET 2 B 7 THR A 160 TYR A 166 1 N VAL A 161 O LYS A 188 SHEET 3 B 7 ALA A 216 GLY A 220 1 O LEU A 218 N GLY A 162 SHEET 4 B 7 LEU A 241 GLN A 244 1 O TYR A 243 N ILE A 217 SHEET 5 B 7 LEU A 265 SER A 268 1 O LEU A 265 N GLN A 244 SHEET 6 B 7 ILE A 372 LYS A 377 -1 O LEU A 374 N MSE A 266 SHEET 7 B 7 LYS A 380 ILE A 383 -1 O VAL A 382 N THR A 375 SHEET 1 C 2 ILE A 349 ALA A 350 0 SHEET 2 C 2 VAL A 355 TYR A 356 -1 O TYR A 356 N ILE A 349 LINK C ILE A 96 N MSE A 97 1555 1555 1.33 LINK C MSE A 97 N GLY A 98 1555 1555 1.33 LINK C VAL A 137 N MSE A 138 1555 1555 1.31 LINK C MSE A 138 N PRO A 139 1555 1555 1.36 LINK C ILE A 144 N MSE A 145 1555 1555 1.32 LINK C MSE A 145 N GLY A 146 1555 1555 1.33 LINK C HIS A 152 N MSE A 153 1555 1555 1.33 LINK C MSE A 153 N LYS A 154 1555 1555 1.33 LINK C ALA A 184 N MSE A 185 1555 1555 1.32 LINK C MSE A 185 N GLY A 186 1555 1555 1.33 LINK C SER A 250 N MSE A 251 1555 1555 1.34 LINK C MSE A 251 N ASP A 252 1555 1555 1.34 LINK C LEU A 265 N MSE A 266 1555 1555 1.33 LINK C MSE A 266 N ALA A 267 1555 1555 1.33 LINK C VAL A 271 N MSE A 272 1555 1555 1.34 LINK C MSE A 272 N ASP A 273 1555 1555 1.33 LINK C GLY A 287 N MSE A 288 1555 1555 1.32 LINK C MSE A 288 N ALA A 289 1555 1555 1.34 CISPEP 1 GLY A 98 SER A 99 0 -5.80 SITE 1 AC1 15 SER A 100 VAL A 101 THR A 102 LEU A 122 SITE 2 AC1 15 ALA A 123 PRO A 124 PRO A 139 TYR A 166 SITE 3 AC1 15 TYR A 170 ARG A 197 SER A 222 HIS A 246 SITE 4 AC1 15 GLY A 247 GLN A 305 HIS A 309 SITE 1 AC2 5 ARG A 85 ARG A 86 HOH A 500 HOH A 539 SITE 2 AC2 5 HOH A 581 SITE 1 AC3 5 SER A 201 ALA A 203 GLU A 235 ARG A 236 SITE 2 AC3 5 HOH A 402 SITE 1 AC4 4 LYS A 154 ASN A 157 VAL A 158 LYS A 159 SITE 1 AC5 5 PRO A 103 ASP A 168 SER A 169 HOH A 409 SITE 2 AC5 5 HOH A 632 CRYST1 43.272 71.578 105.002 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023110 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013971 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009524 0.00000