HEADER TRANSFERASE 15-NOV-11 3UN7 TITLE CRYSTAL STRUCTURE OF PBPA FROM MYCOBACTERIUM TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PENICILLIN-BINDING PROTEIN A; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PBPA; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: MT0019, MTCY10H4.16C, PBPA, RV0016C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PT7HTB KEYWDS TRANSPEPTIDASE, PENICILLIN-BINDING PROTEIN, PEPTIDOGLYCAN, BETA- KEYWDS 2 LACTAM, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.FEDAROVICH,C.DAVIES REVDAT 2 13-SEP-23 3UN7 1 SEQADV REVDAT 1 24-OCT-12 3UN7 0 JRNL AUTH A.FEDAROVICH,R.A.NICHOLAS,C.DAVIES JRNL TITL THE ROLE OF THE BETA5-ALPHA11 LOOP IN THE ACTIVE-SITE JRNL TITL 2 DYNAMICS OF ACYLATED PENICILLIN-BINDING PROTEIN A FROM JRNL TITL 3 MYCOBACTERIUM TUBERCULOSIS JRNL REF J.MOL.BIOL. V. 418 316 2012 JRNL REFN ISSN 0022-2836 JRNL PMID 22365933 JRNL DOI 10.1016/J.JMB.2012.02.021 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.08 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 51331 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2763 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3760 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.40 REMARK 3 BIN R VALUE (WORKING SET) : 0.2230 REMARK 3 BIN FREE R VALUE SET COUNT : 206 REMARK 3 BIN FREE R VALUE : 0.2700 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6400 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 193 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.90000 REMARK 3 B22 (A**2) : -0.90000 REMARK 3 B33 (A**2) : 1.35000 REMARK 3 B12 (A**2) : -0.45000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.171 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.122 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.700 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6538 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8931 ; 1.299 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 864 ; 5.942 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 256 ;35.315 ;23.320 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 971 ;16.249 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 56 ;18.724 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1025 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5040 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3082 ; 0.202 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 4562 ; 0.301 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 336 ; 0.111 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 114 ; 0.181 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 22 ; 0.141 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4439 ; 0.622 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6952 ; 1.024 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2345 ; 1.656 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1979 ; 2.697 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 48 A 488 REMARK 3 ORIGIN FOR THE GROUP (A): 27.3270 -30.6760 -0.8400 REMARK 3 T TENSOR REMARK 3 T11: -0.0072 T22: -0.0483 REMARK 3 T33: -0.0459 T12: 0.0207 REMARK 3 T13: -0.0291 T23: -0.0296 REMARK 3 L TENSOR REMARK 3 L11: 1.8106 L22: 0.4787 REMARK 3 L33: 0.5998 L12: -0.5698 REMARK 3 L13: 0.6323 L23: -0.2440 REMARK 3 S TENSOR REMARK 3 S11: -0.0006 S12: -0.0511 S13: 0.0162 REMARK 3 S21: 0.0165 S22: 0.0334 S23: 0.0100 REMARK 3 S31: 0.0857 S32: 0.0310 S33: -0.0328 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 49 B 488 REMARK 3 ORIGIN FOR THE GROUP (A): 31.0450 -77.4790 1.8860 REMARK 3 T TENSOR REMARK 3 T11: -0.0475 T22: -0.0095 REMARK 3 T33: -0.0752 T12: -0.0123 REMARK 3 T13: -0.0121 T23: 0.0339 REMARK 3 L TENSOR REMARK 3 L11: 2.1997 L22: 0.4058 REMARK 3 L33: 1.2246 L12: -0.2092 REMARK 3 L13: -1.1046 L23: -0.0364 REMARK 3 S TENSOR REMARK 3 S11: -0.0865 S12: 0.2595 S13: -0.0293 REMARK 3 S21: -0.0507 S22: 0.0558 S23: -0.0099 REMARK 3 S31: 0.0607 S32: -0.2468 S33: 0.0307 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3UN7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-NOV-11. REMARK 100 THE DEPOSITION ID IS D_1000068964. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI(220) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54142 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 46.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 12.40 REMARK 200 R MERGE (I) : 0.11800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 35.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : 0.70600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: PDB ENTRY 3LO7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 3350, 0.2 M NACL AND 0.1 M BIS REMARK 280 -TRIS PH 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 31.96667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 63.93333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 47.95000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 79.91667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 15.98333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 30 REMARK 465 ALA A 31 REMARK 465 MET A 32 REMARK 465 GLY A 33 REMARK 465 SER A 34 REMARK 465 ARG A 35 REMARK 465 ALA A 36 REMARK 465 ASP A 37 REMARK 465 PRO A 38 REMARK 465 ARG A 39 REMARK 465 ASN A 40 REMARK 465 GLN A 41 REMARK 465 ARG A 42 REMARK 465 VAL A 43 REMARK 465 LEU A 44 REMARK 465 LEU A 45 REMARK 465 ASP A 46 REMARK 465 GLU A 47 REMARK 465 ALA A 410 REMARK 465 GLN A 411 REMARK 465 GLY A 489 REMARK 465 GLU A 490 REMARK 465 PRO A 491 REMARK 465 GLY B 30 REMARK 465 ALA B 31 REMARK 465 MET B 32 REMARK 465 GLY B 33 REMARK 465 SER B 34 REMARK 465 ARG B 35 REMARK 465 ALA B 36 REMARK 465 ASP B 37 REMARK 465 PRO B 38 REMARK 465 ARG B 39 REMARK 465 ASN B 40 REMARK 465 GLN B 41 REMARK 465 ARG B 42 REMARK 465 VAL B 43 REMARK 465 LEU B 44 REMARK 465 LEU B 45 REMARK 465 ASP B 46 REMARK 465 GLU B 47 REMARK 465 TYR B 48 REMARK 465 ASP B 122 REMARK 465 PHE B 123 REMARK 465 PHE B 124 REMARK 465 THR B 125 REMARK 465 GLY B 126 REMARK 465 GLN B 412 REMARK 465 LYS B 413 REMARK 465 GLY B 414 REMARK 465 ALA B 415 REMARK 465 ILE B 416 REMARK 465 GLY B 489 REMARK 465 GLU B 490 REMARK 465 PRO B 491 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 96 -145.25 70.82 REMARK 500 ALA A 99 -131.70 43.19 REMARK 500 SER A 180 -169.05 -122.76 REMARK 500 GLN A 339 -143.05 -109.30 REMARK 500 LYS A 340 -114.78 45.82 REMARK 500 ASN A 358 33.20 -91.44 REMARK 500 ALA A 451 71.62 -157.49 REMARK 500 SER B 96 -144.00 67.58 REMARK 500 ALA B 99 -135.46 49.37 REMARK 500 SER B 180 -161.91 -125.40 REMARK 500 SER B 207 71.59 32.77 REMARK 500 GLN B 339 -141.64 -115.40 REMARK 500 LYS B 340 -118.14 50.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3LO7 RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 MUTATION IS PRESUMED TO HAVE BEEN INTRODUCED DURING PCR DBREF 3UN7 A 35 491 UNP P71586 PBPA_MYCTU 35 491 DBREF 3UN7 B 35 491 UNP P71586 PBPA_MYCTU 35 491 SEQADV 3UN7 GLY A 30 UNP P71586 EXPRESSION TAG SEQADV 3UN7 ALA A 31 UNP P71586 EXPRESSION TAG SEQADV 3UN7 MET A 32 UNP P71586 EXPRESSION TAG SEQADV 3UN7 GLY A 33 UNP P71586 EXPRESSION TAG SEQADV 3UN7 SER A 34 UNP P71586 EXPRESSION TAG SEQADV 3UN7 ARG A 384 UNP P71586 GLY 384 SEE REMARK 999 SEQADV 3UN7 GLY B 30 UNP P71586 EXPRESSION TAG SEQADV 3UN7 ALA B 31 UNP P71586 EXPRESSION TAG SEQADV 3UN7 MET B 32 UNP P71586 EXPRESSION TAG SEQADV 3UN7 GLY B 33 UNP P71586 EXPRESSION TAG SEQADV 3UN7 SER B 34 UNP P71586 EXPRESSION TAG SEQADV 3UN7 ARG B 384 UNP P71586 GLY 384 SEE REMARK 999 SEQRES 1 A 462 GLY ALA MET GLY SER ARG ALA ASP PRO ARG ASN GLN ARG SEQRES 2 A 462 VAL LEU LEU ASP GLU TYR SER ARG GLN ARG GLY GLN ILE SEQRES 3 A 462 THR ALA GLY GLY GLN LEU LEU ALA TYR SER VAL ALA THR SEQRES 4 A 462 ASP GLY ARG PHE ARG PHE LEU ARG VAL TYR PRO ASN PRO SEQRES 5 A 462 GLU VAL TYR ALA PRO VAL THR GLY PHE TYR SER LEU ARG SEQRES 6 A 462 TYR SER SER THR ALA LEU GLU ARG ALA GLU ASP PRO ILE SEQRES 7 A 462 LEU ASN GLY SER ASP ARG ARG LEU PHE GLY ARG ARG LEU SEQRES 8 A 462 ALA ASP PHE PHE THR GLY ARG ASP PRO ARG GLY GLY ASN SEQRES 9 A 462 VAL ASP THR THR ILE ASN PRO ARG ILE GLN GLN ALA GLY SEQRES 10 A 462 TRP ASP ALA MET GLN GLN GLY CYS TYR GLY PRO CYS LYS SEQRES 11 A 462 GLY ALA VAL VAL ALA LEU GLU PRO SER THR GLY LYS ILE SEQRES 12 A 462 LEU ALA LEU VAL SER SER PRO SER TYR ASP PRO ASN LEU SEQRES 13 A 462 LEU ALA SER HIS ASN PRO GLU VAL GLN ALA GLN ALA TRP SEQRES 14 A 462 GLN ARG LEU GLY ASP ASN PRO ALA SER PRO LEU THR ASN SEQRES 15 A 462 ARG ALA ILE SER GLU THR TYR PRO PRO GLY SER THR PHE SEQRES 16 A 462 LYS VAL ILE THR THR ALA ALA ALA LEU ALA ALA GLY ALA SEQRES 17 A 462 THR GLU THR GLU GLN LEU THR ALA ALA PRO THR ILE PRO SEQRES 18 A 462 LEU PRO GLY SER THR ALA GLN LEU GLU ASN TYR GLY GLY SEQRES 19 A 462 ALA PRO CYS GLY ASP GLU PRO THR VAL SER LEU ARG GLU SEQRES 20 A 462 ALA PHE VAL LYS SER CYS ASN THR ALA PHE VAL GLN LEU SEQRES 21 A 462 GLY ILE ARG THR GLY ALA ASP ALA LEU ARG SER MET ALA SEQRES 22 A 462 ARG ALA PHE GLY LEU ASP SER PRO PRO ARG PRO THR PRO SEQRES 23 A 462 LEU GLN VAL ALA GLU SER THR VAL GLY PRO ILE PRO ASP SEQRES 24 A 462 SER ALA ALA LEU GLY MET THR SER ILE GLY GLN LYS ASP SEQRES 25 A 462 VAL ALA LEU THR PRO LEU ALA ASN ALA GLU ILE ALA ALA SEQRES 26 A 462 THR ILE ALA ASN GLY GLY ILE THR MET ARG PRO TYR LEU SEQRES 27 A 462 VAL GLY SER LEU LYS GLY PRO ASP LEU ALA ASN ILE SER SEQRES 28 A 462 THR THR VAL ARG TYR GLN GLN ARG ARG ALA VAL SER PRO SEQRES 29 A 462 GLN VAL ALA ALA LYS LEU THR GLU LEU MET VAL GLY ALA SEQRES 30 A 462 GLU LYS VAL ALA GLN GLN LYS GLY ALA ILE PRO GLY VAL SEQRES 31 A 462 GLN ILE ALA SER LYS THR GLY THR ALA GLU HIS GLY THR SEQRES 32 A 462 ASP PRO ARG HIS THR PRO PRO HIS ALA TRP TYR ILE ALA SEQRES 33 A 462 PHE ALA PRO ALA GLN ALA PRO LYS VAL ALA VAL ALA VAL SEQRES 34 A 462 LEU VAL GLU ASN GLY ALA ASP ARG LEU SER ALA THR GLY SEQRES 35 A 462 GLY ALA LEU ALA ALA PRO ILE GLY ARG ALA VAL ILE GLU SEQRES 36 A 462 ALA ALA LEU GLN GLY GLU PRO SEQRES 1 B 462 GLY ALA MET GLY SER ARG ALA ASP PRO ARG ASN GLN ARG SEQRES 2 B 462 VAL LEU LEU ASP GLU TYR SER ARG GLN ARG GLY GLN ILE SEQRES 3 B 462 THR ALA GLY GLY GLN LEU LEU ALA TYR SER VAL ALA THR SEQRES 4 B 462 ASP GLY ARG PHE ARG PHE LEU ARG VAL TYR PRO ASN PRO SEQRES 5 B 462 GLU VAL TYR ALA PRO VAL THR GLY PHE TYR SER LEU ARG SEQRES 6 B 462 TYR SER SER THR ALA LEU GLU ARG ALA GLU ASP PRO ILE SEQRES 7 B 462 LEU ASN GLY SER ASP ARG ARG LEU PHE GLY ARG ARG LEU SEQRES 8 B 462 ALA ASP PHE PHE THR GLY ARG ASP PRO ARG GLY GLY ASN SEQRES 9 B 462 VAL ASP THR THR ILE ASN PRO ARG ILE GLN GLN ALA GLY SEQRES 10 B 462 TRP ASP ALA MET GLN GLN GLY CYS TYR GLY PRO CYS LYS SEQRES 11 B 462 GLY ALA VAL VAL ALA LEU GLU PRO SER THR GLY LYS ILE SEQRES 12 B 462 LEU ALA LEU VAL SER SER PRO SER TYR ASP PRO ASN LEU SEQRES 13 B 462 LEU ALA SER HIS ASN PRO GLU VAL GLN ALA GLN ALA TRP SEQRES 14 B 462 GLN ARG LEU GLY ASP ASN PRO ALA SER PRO LEU THR ASN SEQRES 15 B 462 ARG ALA ILE SER GLU THR TYR PRO PRO GLY SER THR PHE SEQRES 16 B 462 LYS VAL ILE THR THR ALA ALA ALA LEU ALA ALA GLY ALA SEQRES 17 B 462 THR GLU THR GLU GLN LEU THR ALA ALA PRO THR ILE PRO SEQRES 18 B 462 LEU PRO GLY SER THR ALA GLN LEU GLU ASN TYR GLY GLY SEQRES 19 B 462 ALA PRO CYS GLY ASP GLU PRO THR VAL SER LEU ARG GLU SEQRES 20 B 462 ALA PHE VAL LYS SER CYS ASN THR ALA PHE VAL GLN LEU SEQRES 21 B 462 GLY ILE ARG THR GLY ALA ASP ALA LEU ARG SER MET ALA SEQRES 22 B 462 ARG ALA PHE GLY LEU ASP SER PRO PRO ARG PRO THR PRO SEQRES 23 B 462 LEU GLN VAL ALA GLU SER THR VAL GLY PRO ILE PRO ASP SEQRES 24 B 462 SER ALA ALA LEU GLY MET THR SER ILE GLY GLN LYS ASP SEQRES 25 B 462 VAL ALA LEU THR PRO LEU ALA ASN ALA GLU ILE ALA ALA SEQRES 26 B 462 THR ILE ALA ASN GLY GLY ILE THR MET ARG PRO TYR LEU SEQRES 27 B 462 VAL GLY SER LEU LYS GLY PRO ASP LEU ALA ASN ILE SER SEQRES 28 B 462 THR THR VAL ARG TYR GLN GLN ARG ARG ALA VAL SER PRO SEQRES 29 B 462 GLN VAL ALA ALA LYS LEU THR GLU LEU MET VAL GLY ALA SEQRES 30 B 462 GLU LYS VAL ALA GLN GLN LYS GLY ALA ILE PRO GLY VAL SEQRES 31 B 462 GLN ILE ALA SER LYS THR GLY THR ALA GLU HIS GLY THR SEQRES 32 B 462 ASP PRO ARG HIS THR PRO PRO HIS ALA TRP TYR ILE ALA SEQRES 33 B 462 PHE ALA PRO ALA GLN ALA PRO LYS VAL ALA VAL ALA VAL SEQRES 34 B 462 LEU VAL GLU ASN GLY ALA ASP ARG LEU SER ALA THR GLY SEQRES 35 B 462 GLY ALA LEU ALA ALA PRO ILE GLY ARG ALA VAL ILE GLU SEQRES 36 B 462 ALA ALA LEU GLN GLY GLU PRO FORMUL 3 HOH *193(H2 O) HELIX 1 1 ASN A 80 GLY A 89 1 10 HELIX 2 2 THR A 98 GLU A 104 1 7 HELIX 3 3 GLU A 104 ASN A 109 1 6 HELIX 4 4 LEU A 115 GLY A 126 1 12 HELIX 5 5 ASN A 139 GLY A 153 1 15 HELIX 6 6 ASP A 182 ALA A 187 1 6 HELIX 7 7 ASN A 190 ASN A 204 1 15 HELIX 8 8 PRO A 220 THR A 223 5 4 HELIX 9 9 PHE A 224 ALA A 235 1 12 HELIX 10 10 TYR A 261 ALA A 264 5 4 HELIX 11 11 LEU A 274 SER A 281 1 8 HELIX 12 12 CYS A 282 GLY A 294 1 13 HELIX 13 13 GLY A 294 PHE A 305 1 12 HELIX 14 14 ASP A 328 SER A 336 1 9 HELIX 15 15 THR A 345 ASN A 358 1 14 HELIX 16 16 SER A 392 VAL A 409 1 18 HELIX 17 17 LEU A 474 GLN A 488 1 15 HELIX 18 18 ASN B 80 GLY B 89 1 10 HELIX 19 19 THR B 98 GLU B 104 1 7 HELIX 20 20 GLU B 104 ASN B 109 1 6 HELIX 21 21 ASP B 112 ARG B 114 5 3 HELIX 22 22 LEU B 115 ALA B 121 1 7 HELIX 23 23 ASN B 139 GLY B 153 1 15 HELIX 24 24 ASP B 182 SER B 188 1 7 HELIX 25 25 ASN B 190 ASN B 204 1 15 HELIX 26 26 PRO B 220 THR B 223 5 4 HELIX 27 27 PHE B 224 GLY B 236 1 13 HELIX 28 28 TYR B 261 ALA B 264 5 4 HELIX 29 29 LEU B 274 SER B 281 1 8 HELIX 30 30 CYS B 282 GLY B 294 1 13 HELIX 31 31 GLY B 294 PHE B 305 1 12 HELIX 32 32 ASP B 328 ILE B 337 1 10 HELIX 33 33 THR B 345 ASN B 358 1 14 HELIX 34 34 SER B 392 ALA B 410 1 19 HELIX 35 35 LEU B 474 GLN B 488 1 15 SHEET 1 A 6 PHE A 74 VAL A 77 0 SHEET 2 A 6 GLN A 60 ALA A 67 -1 N TYR A 64 O VAL A 77 SHEET 3 A 6 ILE A 55 ALA A 57 -1 N ILE A 55 O LEU A 62 SHEET 4 A 6 ASN A 133 THR A 136 1 O VAL A 134 N THR A 56 SHEET 5 A 6 VAL A 368 LYS A 372 -1 O SER A 370 N ASP A 135 SHEET 6 A 6 ASN A 378 THR A 381 -1 O ILE A 379 N LEU A 371 SHEET 1 B 2 TYR A 91 SER A 92 0 SHEET 2 B 2 SER A 96 SER A 97 -1 O SER A 96 N SER A 92 SHEET 1 C 5 ILE A 172 SER A 178 0 SHEET 2 C 5 GLY A 160 LEU A 165 -1 N VAL A 162 O VAL A 176 SHEET 3 C 5 VAL A 454 VAL A 460 -1 O ALA A 455 N LEU A 165 SHEET 4 C 5 HIS A 440 ALA A 447 -1 N ALA A 441 O VAL A 460 SHEET 5 C 5 ALA A 422 ALA A 428 -1 N ALA A 428 O HIS A 440 SHEET 1 D 2 GLN A 242 THR A 244 0 SHEET 2 D 2 THR A 271 SER A 273 -1 O VAL A 272 N LEU A 243 SHEET 1 E 2 THR A 248 PRO A 250 0 SHEET 2 E 2 GLN A 257 GLU A 259 -1 O LEU A 258 N ILE A 249 SHEET 1 F 2 ILE A 361 MET A 363 0 SHEET 2 F 2 GLN A 386 ARG A 389 -1 O ARG A 388 N THR A 362 SHEET 1 G 6 PHE B 74 VAL B 77 0 SHEET 2 G 6 GLN B 60 ALA B 67 -1 N TYR B 64 O VAL B 77 SHEET 3 G 6 ILE B 55 ALA B 57 -1 N ILE B 55 O LEU B 62 SHEET 4 G 6 ASN B 133 THR B 136 1 O VAL B 134 N THR B 56 SHEET 5 G 6 VAL B 368 LYS B 372 -1 O SER B 370 N ASP B 135 SHEET 6 G 6 ASN B 378 THR B 381 -1 O ILE B 379 N LEU B 371 SHEET 1 H 5 ILE B 172 SER B 178 0 SHEET 2 H 5 GLY B 160 LEU B 165 -1 N VAL B 162 O VAL B 176 SHEET 3 H 5 VAL B 454 VAL B 460 -1 O ALA B 455 N LEU B 165 SHEET 4 H 5 HIS B 440 ALA B 447 -1 N ALA B 445 O VAL B 456 SHEET 5 H 5 ALA B 422 ALA B 428 -1 N GLY B 426 O TRP B 442 SHEET 1 I 2 GLN B 242 THR B 244 0 SHEET 2 I 2 THR B 271 SER B 273 -1 O VAL B 272 N LEU B 243 SHEET 1 J 2 THR B 248 PRO B 250 0 SHEET 2 J 2 GLN B 257 GLU B 259 -1 O LEU B 258 N ILE B 249 SHEET 1 K 2 ILE B 361 MET B 363 0 SHEET 2 K 2 GLN B 386 ARG B 389 -1 O GLN B 387 N THR B 362 SSBOND 1 CYS A 154 CYS A 158 1555 1555 2.06 SSBOND 2 CYS A 266 CYS A 282 1555 1555 2.04 SSBOND 3 CYS B 154 CYS B 158 1555 1555 2.06 SSBOND 4 CYS B 266 CYS B 282 1555 1555 2.03 CISPEP 1 SER A 178 PRO A 179 0 -2.28 CISPEP 2 THR A 314 PRO A 315 0 10.99 CISPEP 3 ALA A 447 PRO A 448 0 -12.13 CISPEP 4 SER B 178 PRO B 179 0 -2.15 CISPEP 5 THR B 314 PRO B 315 0 15.05 CISPEP 6 ALA B 447 PRO B 448 0 -13.07 CRYST1 121.300 121.300 95.900 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008244 0.004760 0.000000 0.00000 SCALE2 0.000000 0.009519 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010428 0.00000