HEADER CELL ADHESION 17-NOV-11 3UP6 TITLE CRYSTAL STRUCTURE OF A PUTATIVE CELL ADHESION PROTEIN (BACOVA_04078) TITLE 2 FROM BACTEROIDES OVATUS ATCC 8483 AT 2.80 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN BACOVA_04078; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES OVATUS; SOURCE 3 ORGANISM_TAXID: 411476; SOURCE 4 STRAIN: ATCC 8483; SOURCE 5 GENE: BACOVA_04078; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS CELL ADHESION, MAJOR FIMBRIAL SUBUNIT PROTEIN (FIMA), STRUCTURAL KEYWDS 2 GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN KEYWDS 3 STRUCTURE INITIATIVE, PSI-BIOLOGY EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 6 01-FEB-23 3UP6 1 SEQADV REVDAT 5 22-APR-20 3UP6 1 JRNL LINK REVDAT 4 24-JAN-18 3UP6 1 JRNL REVDAT 3 08-NOV-17 3UP6 1 REMARK REVDAT 2 24-DEC-14 3UP6 1 TITLE REVDAT 1 21-DEC-11 3UP6 0 JRNL AUTH Q.XU,M.SHOJI,S.SHIBATA,M.NAITO,K.SATO,M.A.ELSLIGER, JRNL AUTH 2 J.C.GRANT,H.L.AXELROD,H.J.CHIU,C.L.FARR,L.JAROSZEWSKI, JRNL AUTH 3 M.W.KNUTH,A.M.DEACON,A.GODZIK,S.A.LESLEY,M.A.CURTIS, JRNL AUTH 4 K.NAKAYAMA,I.A.WILSON JRNL TITL A DISTINCT TYPE OF PILUS FROM THE HUMAN MICROBIOME. JRNL REF CELL V. 165 690 2016 JRNL REFN ISSN 1097-4172 JRNL PMID 27062925 JRNL DOI 10.1016/J.CELL.2016.03.016 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.93 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 18950 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 973 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.95 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.38 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2731 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2290 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2599 REMARK 3 BIN R VALUE (WORKING SET) : 0.2244 REMARK 3 BIN FREE R VALUE : 0.3136 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.83 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 132 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4854 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 124 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 58.69 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.93080 REMARK 3 B22 (A**2) : -11.53680 REMARK 3 B33 (A**2) : 17.46760 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.367 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.892 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.866 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4921 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 6698 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2291 ; 8.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 130 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 714 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4921 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 714 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5418 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.25 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.32 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.08 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|35 - 358 } REMARK 3 ORIGIN FOR THE GROUP (A): 55.9931 36.4336 89.6994 REMARK 3 T TENSOR REMARK 3 T11: -0.1403 T22: -0.2153 REMARK 3 T33: 0.0067 T12: -0.0057 REMARK 3 T13: -0.0504 T23: 0.0122 REMARK 3 L TENSOR REMARK 3 L11: 0.9322 L22: 0.9814 REMARK 3 L33: 3.8456 L12: 0.3437 REMARK 3 L13: -1.1588 L23: -0.8738 REMARK 3 S TENSOR REMARK 3 S11: -0.0395 S12: 0.0578 S13: -0.0007 REMARK 3 S21: -0.0577 S22: -0.0356 S23: 0.0159 REMARK 3 S31: 0.1127 S32: -0.1802 S33: 0.0751 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|35 - 358 } REMARK 3 ORIGIN FOR THE GROUP (A): 18.2016 36.7165 84.4286 REMARK 3 T TENSOR REMARK 3 T11: -0.1523 T22: -0.2420 REMARK 3 T33: 0.0105 T12: 0.0046 REMARK 3 T13: -0.0433 T23: 0.0311 REMARK 3 L TENSOR REMARK 3 L11: 1.5930 L22: 1.0192 REMARK 3 L33: 4.0917 L12: 0.8294 REMARK 3 L13: -1.7757 L23: -1.2883 REMARK 3 S TENSOR REMARK 3 S11: -0.0801 S12: 0.0046 S13: 0.0161 REMARK 3 S21: -0.1567 S22: -0.0022 S23: -0.0625 REMARK 3 S31: 0.1783 S32: 0.0343 S33: 0.0824 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 3. THE MAD PHASES WERE USED AS RESTRAINTS DURING REMARK 3 REFINEMENT. 4. NCS RESTRAINTS WERE APPLIED USING BUSTER'S LSSR REMARK 3 RESTRAINT REPRESENTATION (-AUTONCS). REMARK 4 REMARK 4 3UP6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-NOV-11. REMARK 100 THE DEPOSITION ID IS D_1000069035. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-SEP-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.33 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793,0.9537 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : KOHZU: DOUBLE CRYSTAL SI(111) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE DECEMBER 6, 2010 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18914 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 45.931 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 4.670 REMARK 200 R MERGE (I) : 0.14700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.1300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.88 REMARK 200 R MERGE FOR SHELL (I) : 0.71900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.080 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0M LITHIUM CHLORIDE, 18.0% REMARK 280 POLYETHYLENE GLYCOL 6000, 0.1M SODIUM CITRATE - CITRIC ACID PH REMARK 280 5.33, ADDITIVE: 0.001 M IRON (II) CHLORIDE, NANODROP, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.02150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.17800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.56900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.17800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.02150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.56900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 ASP A 25 REMARK 465 VAL A 26 REMARK 465 ALA A 27 REMARK 465 TYR A 28 REMARK 465 GLU A 29 REMARK 465 LEU A 30 REMARK 465 PRO A 31 REMARK 465 ALA A 32 REMARK 465 HIS A 33 REMARK 465 THR A 34 REMARK 465 GLY A 47 REMARK 465 ASP A 48 REMARK 465 GLY A 359 REMARK 465 GLU A 360 REMARK 465 ARG A 361 REMARK 465 GLN A 362 REMARK 465 ASP A 363 REMARK 465 ILE A 364 REMARK 465 ASP A 365 REMARK 465 LEU A 366 REMARK 465 ASP A 367 REMARK 465 MSE A 368 REMARK 465 ASP A 369 REMARK 465 LEU A 370 REMARK 465 GLY B 0 REMARK 465 ASP B 25 REMARK 465 VAL B 26 REMARK 465 ALA B 27 REMARK 465 TYR B 28 REMARK 465 GLU B 29 REMARK 465 LEU B 30 REMARK 465 PRO B 31 REMARK 465 ALA B 32 REMARK 465 HIS B 33 REMARK 465 THR B 34 REMARK 465 GLY B 359 REMARK 465 GLU B 360 REMARK 465 ARG B 361 REMARK 465 GLN B 362 REMARK 465 ASP B 363 REMARK 465 ILE B 364 REMARK 465 ASP B 365 REMARK 465 LEU B 366 REMARK 465 ASP B 367 REMARK 465 MSE B 368 REMARK 465 ASP B 369 REMARK 465 LEU B 370 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 50 CG CD OE1 OE2 REMARK 470 GLN A 51 CG CD OE1 NE2 REMARK 470 GLU A 241 CG CD OE1 OE2 REMARK 470 GLU A 266 CG CD OE1 OE2 REMARK 470 ASP A 318 CG OD1 OD2 REMARK 470 THR A 320 OG1 CG2 REMARK 470 ARG B 36 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 48 CG OD1 OD2 REMARK 470 GLU B 50 CG CD OE1 OE2 REMARK 470 GLU B 241 CG CD OE1 OE2 REMARK 470 GLU B 266 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 164 -1.18 72.41 REMARK 500 ASP A 238 62.02 29.78 REMARK 500 ALA A 262 151.16 -49.89 REMARK 500 VAL A 317 73.13 -103.78 REMARK 500 PRO A 323 54.03 -99.45 REMARK 500 ASP B 164 -0.53 72.23 REMARK 500 ASP B 238 61.81 30.09 REMARK 500 VAL B 317 72.56 -103.58 REMARK 500 PRO B 323 53.82 -99.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 417104 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT (RESIDUES 25-370) WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3UP6 A 25 370 UNP A7M1U4 A7M1U4_BACOV 25 370 DBREF 3UP6 B 25 370 UNP A7M1U4 A7M1U4_BACOV 25 370 SEQADV 3UP6 GLY A 0 UNP A7M1U4 EXPRESSION TAG SEQADV 3UP6 GLY B 0 UNP A7M1U4 EXPRESSION TAG SEQRES 1 A 347 GLY ASP VAL ALA TYR GLU LEU PRO ALA HIS THR THR ARG SEQRES 2 A 347 ALA GLN LEU SER ILE ASP LEU VAL ASN ASN GLY ASP VAL SEQRES 3 A 347 GLU GLN GLN GLU LYS ILE ASN SER MSE ARG PHE ILE VAL SEQRES 4 A 347 PHE GLY SER THR PRO GLY GLY VAL ARG LEU ASP VAL ASN SEQRES 5 A 347 GLU HIS ILE LEU LEU SER THR PRO GLU THR ALA THR ASP SEQRES 6 A 347 ILE ASP ALA GLN LEU LEU GLU VAL THR SER SER ASN ASP SEQRES 7 A 347 ILE LEU VAL VAL VAL ILE ALA ASN GLU PRO GLN SER LEU SEQRES 8 A 347 THR SER GLN LEU ASP GLY ILE ALA ASN LEU LEU THR LEU SEQRES 9 A 347 GLN GLU MSE ILE TYR ASP ILE SER SER ILE LEU ASN SER SEQRES 10 A 347 ASP GLY GLN ILE ILE SER ALA THR GLY MSE PRO MSE THR SEQRES 11 A 347 GLY VAL ILE ARG ASP ILE SER ILE ALA PRO ASP GLU THR SEQRES 12 A 347 LYS THR VAL GLN MSE VAL ILE GLU ARG ALA VAL ALA ARG SEQRES 13 A 347 VAL ASP VAL PHE ILE GLU ALA ILE ASP GLY GLY ALA VAL SEQRES 14 A 347 THR GLY TYR THR ALA GLY SER THR SER VAL THR LEU HIS SEQRES 15 A 347 ASN PHE SER HIS ASP SER TYR PHE VAL MSE GLY ASN VAL SEQRES 16 A 347 GLY ASN GLY THR ARG ASP ASN ALA ASP SER SER LYS ASN SEQRES 17 A 347 TYR GLY LYS VAL LYS GLU ASP VAL SER GLU SER ASN LEU SEQRES 18 A 347 LEU THR HIS SER TRP THR ALA ALA THR THR GLU THR TRP SEQRES 19 A 347 ALA TYR SER SER ALA PRO GLY ALA GLU ASN ARG LYS LEU SEQRES 20 A 347 LEU CYS SER PHE TYR THR ALA GLU ARG LEU PHE LYS SER SEQRES 21 A 347 ASP TYR SER ASP ARG LEU SER ILE SER MSE ALA ASN VAL SEQRES 22 A 347 LEU LYS GLY PRO SER ASP VAL THR GLY ILE THR GLY LYS SEQRES 23 A 347 VAL ILE GLU SER VAL THR LYS VAL ASP GLY THR GLY SER SEQRES 24 A 347 PRO THR ALA GLN PRO PHE THR GLU ILE ARG ARG ASN ASN SEQRES 25 A 347 VAL TYR GLN VAL THR ALA ARG VAL GLY LYS ILE GLY ILE SEQRES 26 A 347 GLN ILE LEU THR ILE SER VAL GLU ASP TRP GLY GLU ARG SEQRES 27 A 347 GLN ASP ILE ASP LEU ASP MSE ASP LEU SEQRES 1 B 347 GLY ASP VAL ALA TYR GLU LEU PRO ALA HIS THR THR ARG SEQRES 2 B 347 ALA GLN LEU SER ILE ASP LEU VAL ASN ASN GLY ASP VAL SEQRES 3 B 347 GLU GLN GLN GLU LYS ILE ASN SER MSE ARG PHE ILE VAL SEQRES 4 B 347 PHE GLY SER THR PRO GLY GLY VAL ARG LEU ASP VAL ASN SEQRES 5 B 347 GLU HIS ILE LEU LEU SER THR PRO GLU THR ALA THR ASP SEQRES 6 B 347 ILE ASP ALA GLN LEU LEU GLU VAL THR SER SER ASN ASP SEQRES 7 B 347 ILE LEU VAL VAL VAL ILE ALA ASN GLU PRO GLN SER LEU SEQRES 8 B 347 THR SER GLN LEU ASP GLY ILE ALA ASN LEU LEU THR LEU SEQRES 9 B 347 GLN GLU MSE ILE TYR ASP ILE SER SER ILE LEU ASN SER SEQRES 10 B 347 ASP GLY GLN ILE ILE SER ALA THR GLY MSE PRO MSE THR SEQRES 11 B 347 GLY VAL ILE ARG ASP ILE SER ILE ALA PRO ASP GLU THR SEQRES 12 B 347 LYS THR VAL GLN MSE VAL ILE GLU ARG ALA VAL ALA ARG SEQRES 13 B 347 VAL ASP VAL PHE ILE GLU ALA ILE ASP GLY GLY ALA VAL SEQRES 14 B 347 THR GLY TYR THR ALA GLY SER THR SER VAL THR LEU HIS SEQRES 15 B 347 ASN PHE SER HIS ASP SER TYR PHE VAL MSE GLY ASN VAL SEQRES 16 B 347 GLY ASN GLY THR ARG ASP ASN ALA ASP SER SER LYS ASN SEQRES 17 B 347 TYR GLY LYS VAL LYS GLU ASP VAL SER GLU SER ASN LEU SEQRES 18 B 347 LEU THR HIS SER TRP THR ALA ALA THR THR GLU THR TRP SEQRES 19 B 347 ALA TYR SER SER ALA PRO GLY ALA GLU ASN ARG LYS LEU SEQRES 20 B 347 LEU CYS SER PHE TYR THR ALA GLU ARG LEU PHE LYS SER SEQRES 21 B 347 ASP TYR SER ASP ARG LEU SER ILE SER MSE ALA ASN VAL SEQRES 22 B 347 LEU LYS GLY PRO SER ASP VAL THR GLY ILE THR GLY LYS SEQRES 23 B 347 VAL ILE GLU SER VAL THR LYS VAL ASP GLY THR GLY SER SEQRES 24 B 347 PRO THR ALA GLN PRO PHE THR GLU ILE ARG ARG ASN ASN SEQRES 25 B 347 VAL TYR GLN VAL THR ALA ARG VAL GLY LYS ILE GLY ILE SEQRES 26 B 347 GLN ILE LEU THR ILE SER VAL GLU ASP TRP GLY GLU ARG SEQRES 27 B 347 GLN ASP ILE ASP LEU ASP MSE ASP LEU MODRES 3UP6 MSE A 58 MET SELENOMETHIONINE MODRES 3UP6 MSE A 130 MET SELENOMETHIONINE MODRES 3UP6 MSE A 150 MET SELENOMETHIONINE MODRES 3UP6 MSE A 152 MET SELENOMETHIONINE MODRES 3UP6 MSE A 171 MET SELENOMETHIONINE MODRES 3UP6 MSE A 215 MET SELENOMETHIONINE MODRES 3UP6 MSE A 293 MET SELENOMETHIONINE MODRES 3UP6 MSE B 58 MET SELENOMETHIONINE MODRES 3UP6 MSE B 130 MET SELENOMETHIONINE MODRES 3UP6 MSE B 150 MET SELENOMETHIONINE MODRES 3UP6 MSE B 152 MET SELENOMETHIONINE MODRES 3UP6 MSE B 171 MET SELENOMETHIONINE MODRES 3UP6 MSE B 215 MET SELENOMETHIONINE MODRES 3UP6 MSE B 293 MET SELENOMETHIONINE HET MSE A 58 8 HET MSE A 130 8 HET MSE A 150 8 HET MSE A 152 8 HET MSE A 171 8 HET MSE A 215 8 HET MSE A 293 8 HET MSE B 58 8 HET MSE B 130 8 HET MSE B 150 8 HET MSE B 152 8 HET MSE B 171 8 HET MSE B 215 8 HET MSE B 293 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 14(C5 H11 N O2 SE) FORMUL 3 HOH *124(H2 O) HELIX 1 1 PRO A 111 SER A 113 5 3 HELIX 2 2 LEU A 114 GLY A 120 1 7 HELIX 3 3 ASN A 123 GLU A 129 1 7 HELIX 4 4 SER A 135 ILE A 137 5 3 HELIX 5 5 ASN A 217 GLY A 221 5 5 HELIX 6 6 ASP A 227 ASN A 231 5 5 HELIX 7 7 PRO B 111 GLY B 120 1 10 HELIX 8 8 ASN B 123 GLU B 129 1 7 HELIX 9 9 SER B 135 ILE B 137 5 3 HELIX 10 10 ASP B 227 ASN B 231 5 5 SHEET 1 A 3 GLN A 92 THR A 97 0 SHEET 2 A 3 ARG A 36 VAL A 44 -1 N ALA A 37 O VAL A 96 SHEET 3 A 3 THR A 166 VAL A 172 1 O LYS A 167 N SER A 40 SHEET 1 B 5 VAL A 70 GLU A 84 0 SHEET 2 B 5 ILE A 55 SER A 65 -1 N MSE A 58 O ILE A 78 SHEET 3 B 5 SER A 99 ALA A 108 -1 O VAL A 105 N ILE A 61 SHEET 4 B 5 MSE A 152 ILE A 161 -1 O GLY A 154 N VAL A 106 SHEET 5 B 5 GLU A 174 ARG A 175 -1 O GLU A 174 N THR A 153 SHEET 1 C 2 ILE A 131 ASP A 133 0 SHEET 2 C 2 ASP A 210 TYR A 212 -1 O SER A 211 N TYR A 132 SHEET 1 D 6 ARG A 268 THR A 276 0 SHEET 2 D 6 ALA A 178 ALA A 186 -1 N VAL A 180 O PHE A 274 SHEET 3 D 6 VAL A 336 VAL A 343 1 O TYR A 337 N ARG A 179 SHEET 4 D 6 ILE A 348 VAL A 355 -1 O LEU A 351 N THR A 340 SHEET 5 D 6 SER A 313 LYS A 316 1 N THR A 315 O SER A 354 SHEET 6 D 6 ALA A 325 PRO A 327 -1 O GLN A 326 N VAL A 314 SHEET 1 E 5 LEU A 245 SER A 248 0 SHEET 2 E 5 SER A 201 PHE A 207 -1 N PHE A 207 O LEU A 245 SHEET 3 E 5 SER A 290 LYS A 298 -1 O SER A 290 N HIS A 205 SHEET 4 E 5 THR A 193 TYR A 195 -1 N GLY A 194 O LEU A 297 SHEET 5 E 5 GLU A 255 TRP A 257 -1 O TRP A 257 N THR A 193 SHEET 1 F 4 LEU A 245 SER A 248 0 SHEET 2 F 4 SER A 201 PHE A 207 -1 N PHE A 207 O LEU A 245 SHEET 3 F 4 SER A 290 LYS A 298 -1 O SER A 290 N HIS A 205 SHEET 4 F 4 VAL A 303 VAL A 310 -1 O LYS A 309 N ILE A 291 SHEET 1 G 2 ARG A 279 LEU A 280 0 SHEET 2 G 2 GLU A 330 ILE A 331 -1 O ILE A 331 N ARG A 279 SHEET 1 H 3 GLN B 92 THR B 97 0 SHEET 2 H 3 ARG B 36 VAL B 44 -1 N ALA B 37 O VAL B 96 SHEET 3 H 3 THR B 166 VAL B 172 1 O LYS B 167 N SER B 40 SHEET 1 I 5 VAL B 70 GLU B 84 0 SHEET 2 I 5 ILE B 55 SER B 65 -1 N MSE B 58 O ILE B 78 SHEET 3 I 5 SER B 99 ALA B 108 -1 O VAL B 105 N ILE B 61 SHEET 4 I 5 MSE B 152 ILE B 161 -1 O MSE B 152 N ALA B 108 SHEET 5 I 5 GLU B 174 ARG B 175 -1 O GLU B 174 N THR B 153 SHEET 1 J 2 ILE B 131 ASP B 133 0 SHEET 2 J 2 ASP B 210 TYR B 212 -1 O SER B 211 N TYR B 132 SHEET 1 K 6 ARG B 268 THR B 276 0 SHEET 2 K 6 ALA B 178 ALA B 186 -1 N VAL B 180 O PHE B 274 SHEET 3 K 6 VAL B 336 VAL B 343 1 O TYR B 337 N ARG B 179 SHEET 4 K 6 ILE B 348 VAL B 355 -1 O ILE B 353 N GLN B 338 SHEET 5 K 6 SER B 313 LYS B 316 1 N THR B 315 O SER B 354 SHEET 6 K 6 ALA B 325 PRO B 327 -1 O GLN B 326 N VAL B 314 SHEET 1 L 5 LEU B 245 SER B 248 0 SHEET 2 L 5 SER B 201 PHE B 207 -1 N PHE B 207 O LEU B 245 SHEET 3 L 5 SER B 290 LYS B 298 -1 O SER B 290 N HIS B 205 SHEET 4 L 5 THR B 193 TYR B 195 -1 N GLY B 194 O LEU B 297 SHEET 5 L 5 GLU B 255 TRP B 257 -1 O TRP B 257 N THR B 193 SHEET 1 M 4 LEU B 245 SER B 248 0 SHEET 2 M 4 SER B 201 PHE B 207 -1 N PHE B 207 O LEU B 245 SHEET 3 M 4 SER B 290 LYS B 298 -1 O SER B 290 N HIS B 205 SHEET 4 M 4 VAL B 303 VAL B 310 -1 O LYS B 309 N ILE B 291 SHEET 1 N 2 ARG B 279 LEU B 280 0 SHEET 2 N 2 GLU B 330 ILE B 331 -1 O ILE B 331 N ARG B 279 LINK C SER A 57 N MSE A 58 1555 1555 1.33 LINK C MSE A 58 N ARG A 59 1555 1555 1.33 LINK C GLU A 129 N MSE A 130 1555 1555 1.35 LINK C MSE A 130 N ILE A 131 1555 1555 1.33 LINK C GLY A 149 N MSE A 150 1555 1555 1.35 LINK C MSE A 150 N PRO A 151 1555 1555 1.37 LINK C PRO A 151 N MSE A 152 1555 1555 1.33 LINK C MSE A 152 N THR A 153 1555 1555 1.31 LINK C GLN A 170 N MSE A 171 1555 1555 1.34 LINK C MSE A 171 N VAL A 172 1555 1555 1.36 LINK C VAL A 214 N MSE A 215 1555 1555 1.35 LINK C MSE A 215 N GLY A 216 1555 1555 1.33 LINK C SER A 292 N MSE A 293 1555 1555 1.34 LINK C MSE A 293 N ALA A 294 1555 1555 1.32 LINK C SER B 57 N MSE B 58 1555 1555 1.34 LINK C MSE B 58 N ARG B 59 1555 1555 1.35 LINK C GLU B 129 N MSE B 130 1555 1555 1.35 LINK C MSE B 130 N ILE B 131 1555 1555 1.33 LINK C GLY B 149 N MSE B 150 1555 1555 1.33 LINK C MSE B 150 N PRO B 151 1555 1555 1.36 LINK C PRO B 151 N MSE B 152 1555 1555 1.35 LINK C MSE B 152 N THR B 153 1555 1555 1.32 LINK C GLN B 170 N MSE B 171 1555 1555 1.35 LINK C MSE B 171 N VAL B 172 1555 1555 1.36 LINK C VAL B 214 N MSE B 215 1555 1555 1.35 LINK C MSE B 215 N GLY B 216 1555 1555 1.34 LINK C SER B 292 N MSE B 293 1555 1555 1.32 LINK C MSE B 293 N ALA B 294 1555 1555 1.33 CRYST1 78.043 91.138 106.356 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012813 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010972 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009402 0.00000