HEADER METHIONINE-BINDING PROTEIN 17-NOV-11 3UP9 TITLE CRYSTAL STRUCTURE OF A PUTATIVE LIPOPROTEIN (ACTODO_00931) FROM TITLE 2 ACTINOMYCES ODONTOLYTICUS ATCC 17982 AT 2.35 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 33-277; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACTINOMYCES ODONTOLYTICUS; SOURCE 3 ORGANISM_TAXID: 411466; SOURCE 4 ATCC: 17982; SOURCE 5 GENE: ACTODO_00931; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS MEMBRANE LIPOPROTEIN, L-METHIONINE BINDING PROTEIN, NLPA LIPOPROTEIN, KEYWDS 2 STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 3 PROTEIN STRUCTURE INITIATIVE, PSI-BIOLOGY, METHIONINE-BINDING KEYWDS 4 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 06-DEC-23 3UP9 1 REMARK REVDAT 4 13-SEP-23 3UP9 1 REMARK REVDAT 3 17-JUL-19 3UP9 1 REMARK REVDAT 2 08-NOV-17 3UP9 1 REMARK REVDAT 1 25-JAN-12 3UP9 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN ACTODO_00931 JRNL TITL 2 (HYPOTHETICAL PROTEIN ACTODO_00931, SP17422A, P_02044074.1) JRNL TITL 3 FROM ACTINOMYCES ODONTOLYTICUS ATCC 17982 AT 2.35 A JRNL TITL 4 RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.72 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 17706 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 901 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.41 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1189 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.92 REMARK 3 BIN R VALUE (WORKING SET) : 0.2160 REMARK 3 BIN FREE R VALUE SET COUNT : 65 REMARK 3 BIN FREE R VALUE : 0.2760 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1830 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 62 REMARK 3 SOLVENT ATOMS : 122 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.42 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.10000 REMARK 3 B22 (A**2) : 0.10000 REMARK 3 B33 (A**2) : -0.20000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.181 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.170 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.113 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.780 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1940 ; 0.017 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1271 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2625 ; 1.963 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3151 ; 1.076 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 243 ; 6.282 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 89 ;43.577 ;26.629 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 307 ;15.395 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 3 ;10.927 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 299 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2139 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 340 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 37 A 277 REMARK 3 ORIGIN FOR THE GROUP (A): 31.4910 33.4090 57.9870 REMARK 3 T TENSOR REMARK 3 T11: 0.1591 T22: 0.1864 REMARK 3 T33: 0.0197 T12: 0.0340 REMARK 3 T13: -0.0037 T23: 0.0116 REMARK 3 L TENSOR REMARK 3 L11: 1.8701 L22: 2.2960 REMARK 3 L33: 1.0186 L12: 1.1880 REMARK 3 L13: 0.1540 L23: 0.2567 REMARK 3 S TENSOR REMARK 3 S11: 0.0668 S12: 0.0110 S13: 0.1263 REMARK 3 S21: 0.0693 S22: 0.0102 S23: 0.0038 REMARK 3 S31: 0.0616 S32: 0.0245 S33: -0.0770 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. ATOM RECORD CONTAINS SUM OF TLS AND REMARK 3 RESIDUAL B FACTORS. 3. ANISOU RECORD CONTAINS SUM OF TLS AND REMARK 3 RESIDUAL U FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS REMARK 3 ASSIGNMENT. 5. A SELENO-METHIONINE AMINO ACID HAS BEEN MODELED REMARK 3 AS A LIGAND BASED ON THE ELECTRON DENSITY. A MET-INHIBITION REMARK 3 PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING REMARK 3 PROTEIN EXPRESSION. ANOMALOUS DIFFERENCE FOURIERS MAP SUPPORTS REMARK 3 THE MODELING OF MET AS MSE. 6. PEG FRAGMENTS (PE4, PG4) FROM THE REMARK 3 CRYSTALLIZATION/CRYOPROTECTION SOLUTIONS ARE MODELED. REMARK 4 REMARK 4 3UP9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-NOV-11. REMARK 100 THE DEPOSITION ID IS D_1000069038. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-SEP-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : KOHZU: DOUBLE CRYSTAL SI(111) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17718 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 29.722 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.18100 REMARK 200 FOR THE DATA SET : 7.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.41 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.95900 REMARK 200 R SYM FOR SHELL (I) : 0.95900 REMARK 200 FOR SHELL : 0.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3TQW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20.00% POLYETHYLENE GLYCOL 1000, 0.1M REMARK 280 TRIS PH 7.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y,Z REMARK 290 7555 -Y+1/2,X,Z+3/4 REMARK 290 8555 Y,-X+1/2,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 47.95850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 47.95850 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.89050 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 47.95850 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 23.44525 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 47.95850 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 70.33575 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 47.95850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 47.95850 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 46.89050 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 47.95850 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 70.33575 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 47.95850 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 23.44525 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A REMARK 300 MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 334 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 33 REMARK 465 SER A 34 REMARK 465 SER A 35 REMARK 465 SER A 36 REMARK 465 ASP A 169 REMARK 465 GLY A 170 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 167 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 94 -13.39 -160.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PG4 A 301 REMARK 610 PG4 A 302 REMARK 610 PG4 A 303 REMARK 610 PG4 A 304 REMARK 610 PE4 A 305 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PE4 A 305 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 416495 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 34-277 OF THE TARGET REMARK 999 SEQUENCE. DBREF 3UP9 A 33 277 UNP A7BBB2 A7BBB2_9ACTO 33 277 SEQRES 1 A 245 GLY SER SER SER ASP VAL VAL THR LEU THR VAL GLY ALA SEQRES 2 A 245 THR PRO SER PRO HIS ALA LYS ILE LEU THR TYR ILE ASN SEQRES 3 A 245 ASP ASN LEU ALA ALA ASP ALA GLY ILE LYS LEU ASP ILE SEQRES 4 A 245 VAL GLU TYR THR ASP TYR VAL GLN PRO ASN THR ALA LEU SEQRES 5 A 245 ASN ASP GLY ASP LEU ASP ALA ASN PHE TYR GLN THR VAL SEQRES 6 A 245 PRO TYR LEU GLU ASN ALA GLU LYS GLN PHE GLY TYR ASN SEQRES 7 A 245 PHE GLU ALA GLY GLU GLY ILE HIS LEU GLU PRO LEU GLY SEQRES 8 A 245 VAL PHE SER ASN LYS HIS LYS SER LEU ASP GLU LEU PRO SEQRES 9 A 245 ASP GLY GLY THR ILE GLY ILE ILE SER ASP THR ALA ASN SEQRES 10 A 245 GLN SER ARG ALA LEU GLU LEU LEU ALA THR GLN GLY LEU SEQRES 11 A 245 VAL SER ILE PRO GLU GLY ASP GLY ASP VAL ASN ILE ASN SEQRES 12 A 245 THR VAL THR LYS LEU LYS ASN PHE ASP PHE ARG GLU VAL SEQRES 13 A 245 GLU GLY PRO GLN LEU VAL ARG SER LEU ASP ASP PHE ASP SEQRES 14 A 245 TYR ALA VAL ILE ASN GLY ASN PHE ALA GLN GLU GLY GLY SEQRES 15 A 245 LYS THR ILE SER GLY ASP ALA LEU VAL VAL GLU SER PRO SEQRES 16 A 245 VAL ASP ASN PRO ALA VAL ASN VAL LEU VAL TRP LYS GLY SEQRES 17 A 245 ASP SER LYS LYS VAL ASP ALA ILE ALA LYS LEU GLU LYS SEQRES 18 A 245 LEU LEU HIS SER ASP GLU VAL LYS GLN TYR ILE GLU LYS SEQRES 19 A 245 THR TRP SER ASP GLY SER VAL ILE PRO ALA PHE HET MSE A 300 9 HET PG4 A 301 10 HET PG4 A 302 7 HET PG4 A 303 10 HET PG4 A 304 10 HET PE4 A 305 16 HETNAM MSE SELENOMETHIONINE HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM PE4 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}- HETNAM 2 PE4 ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL HETSYN PE4 POLYETHYLENE GLYCOL PEG4000 FORMUL 2 MSE C5 H11 N O2 SE FORMUL 3 PG4 4(C8 H18 O5) FORMUL 7 PE4 C16 H34 O8 FORMUL 8 HOH *122(H2 O) HELIX 1 1 PRO A 49 LEU A 61 1 13 HELIX 2 2 LEU A 61 GLY A 66 1 6 HELIX 3 3 TYR A 77 ASP A 86 1 10 HELIX 4 4 VAL A 97 GLY A 108 1 12 HELIX 5 5 SER A 131 LEU A 135 5 5 HELIX 6 6 ASP A 146 GLN A 160 1 15 HELIX 7 7 GLU A 189 PRO A 191 5 3 HELIX 8 8 GLN A 192 LEU A 197 1 6 HELIX 9 9 ASN A 206 GLY A 213 1 8 HELIX 10 10 THR A 216 ALA A 221 1 6 HELIX 11 11 LYS A 244 HIS A 256 1 13 HELIX 12 12 SER A 257 TRP A 268 1 12 SHEET 1 A 5 ILE A 67 GLU A 73 0 SHEET 2 A 5 VAL A 39 ALA A 45 1 N LEU A 41 O ASP A 70 SHEET 3 A 5 ALA A 91 THR A 96 1 O PHE A 93 N GLY A 44 SHEET 4 A 5 VAL A 233 LYS A 239 -1 O VAL A 237 N ASN A 92 SHEET 5 A 5 PHE A 111 ALA A 113 -1 N GLU A 112 O TRP A 238 SHEET 1 B 6 ILE A 67 GLU A 73 0 SHEET 2 B 6 VAL A 39 ALA A 45 1 N LEU A 41 O ASP A 70 SHEET 3 B 6 ALA A 91 THR A 96 1 O PHE A 93 N GLY A 44 SHEET 4 B 6 VAL A 233 LYS A 239 -1 O VAL A 237 N ASN A 92 SHEET 5 B 6 HIS A 118 LEU A 119 -1 N HIS A 118 O ASN A 234 SHEET 6 B 6 ILE A 274 PRO A 275 -1 O ILE A 274 N LEU A 119 SHEET 1 C 5 PHE A 183 VAL A 188 0 SHEET 2 C 5 GLY A 139 ILE A 144 1 N ILE A 141 O ARG A 186 SHEET 3 C 5 TYR A 202 ILE A 205 1 O VAL A 204 N GLY A 142 SHEET 4 C 5 GLY A 123 PHE A 125 -1 N GLY A 123 O ILE A 205 SHEET 5 C 5 VAL A 223 VAL A 224 -1 O VAL A 223 N VAL A 124 SHEET 1 D 2 VAL A 163 SER A 164 0 SHEET 2 D 2 THR A 178 LYS A 179 -1 O THR A 178 N SER A 164 CISPEP 1 SER A 48 PRO A 49 0 -0.32 SITE 1 AC1 4 GLY A 87 ASP A 90 LYS A 105 HOH A 426 SITE 1 AC2 5 ASN A 85 PHE A 107 GLY A 108 ASN A 110 SITE 2 AC2 5 LYS A 239 SITE 1 AC3 4 LEU A 132 ASP A 133 LEU A 135 LYS A 181 SITE 1 AC4 5 SER A 126 ASN A 127 HIS A 129 LYS A 130 SITE 2 AC4 5 GLY A 219 SITE 1 AC5 6 PRO A 47 LYS A 52 GLU A 73 GLN A 211 SITE 2 AC5 6 THR A 267 HOH A 403 CRYST1 95.917 95.917 93.781 90.00 90.00 90.00 I 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010426 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010426 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010663 0.00000