data_3UQ8 # _entry.id 3UQ8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3UQ8 RCSB RCSB069072 WWPDB D_1000069072 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3PN1 _pdbx_database_related.details 'Novel Bacterial NAD+-dependent DNA Ligase Inhibitors with Broad Spectrum Potency and Antibacterial Efficacy In Vivo' _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3UQ8 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-11-19 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _audit_author.name 'Lahiri, S.D.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Structure Guided Understanding of NAD(+) Recognition in Bacterial DNA Ligases.' _citation.journal_abbrev 'Acs Chem.Biol.' _citation.journal_volume 7 _citation.page_first 571 _citation.page_last 580 _citation.year 2012 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1554-8929 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22230472 _citation.pdbx_database_id_DOI 10.1021/cb200392g # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Lahiri, S.D.' 1 primary 'Gu, R.F.' 2 primary 'Gao, N.' 3 primary 'Karantzeni, I.' 4 primary 'Walkup, G.K.' 5 primary 'Mills, S.D.' 6 # _cell.length_a 70.233 _cell.length_b 70.233 _cell.length_c 161.286 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3UQ8 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.entry_id 3UQ8 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 96 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA ligase' 36164.840 1 6.5.1.2 ? 'Adenylation domain, UNP residues 3-324' ? 2 non-polymer syn NICOTINAMIDE-ADENINE-DINUCLEOTIDE 663.425 1 ? ? ? ? 3 non-polymer syn 'ADENOSINE MONOPHOSPHATE' 347.221 1 ? ? ? ? 4 water nat water 18.015 273 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Polydeoxyribonucleotide synthase [NAD+]' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;NIQTQLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVGAKPLSGFSQIRHEIPMLSL DNAFSDAEFNAFVARIEDRLILLPAPLTFCCEPKLDGLAVSILYVNGELTQAATRGDGTTGEDITANIRTIRNVPLQLLT DNPPARLEVRGEVFMPHAGFERLNKYALEHNEKTFANPRNAAAGSLRQLDPNITSKRPLVLNAYGIGIAEGVDLPTTHYA RLQWLKSIGIPVNPEIRLCNGADEVLGFYRDIQNKRSSLGYDIDGTVLKINDIALQNELGFISKAPRWAIAYKFPAQEEL TL ; _entity_poly.pdbx_seq_one_letter_code_can ;NIQTQLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVGAKPLSGFSQIRHEIPMLSL DNAFSDAEFNAFVARIEDRLILLPAPLTFCCEPKLDGLAVSILYVNGELTQAATRGDGTTGEDITANIRTIRNVPLQLLT DNPPARLEVRGEVFMPHAGFERLNKYALEHNEKTFANPRNAAAGSLRQLDPNITSKRPLVLNAYGIGIAEGVDLPTTHYA RLQWLKSIGIPVNPEIRLCNGADEVLGFYRDIQNKRSSLGYDIDGTVLKINDIALQNELGFISKAPRWAIAYKFPAQEEL TL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 ILE n 1 3 GLN n 1 4 THR n 1 5 GLN n 1 6 LEU n 1 7 ASP n 1 8 ASN n 1 9 LEU n 1 10 ARG n 1 11 LYS n 1 12 THR n 1 13 LEU n 1 14 ARG n 1 15 GLN n 1 16 TYR n 1 17 GLU n 1 18 TYR n 1 19 GLU n 1 20 TYR n 1 21 HIS n 1 22 VAL n 1 23 LEU n 1 24 ASP n 1 25 ASN n 1 26 PRO n 1 27 SER n 1 28 VAL n 1 29 PRO n 1 30 ASP n 1 31 SER n 1 32 GLU n 1 33 TYR n 1 34 ASP n 1 35 ARG n 1 36 LEU n 1 37 PHE n 1 38 HIS n 1 39 GLN n 1 40 LEU n 1 41 LYS n 1 42 ALA n 1 43 LEU n 1 44 GLU n 1 45 LEU n 1 46 GLU n 1 47 HIS n 1 48 PRO n 1 49 GLU n 1 50 PHE n 1 51 LEU n 1 52 THR n 1 53 SER n 1 54 ASP n 1 55 SER n 1 56 PRO n 1 57 THR n 1 58 GLN n 1 59 ARG n 1 60 VAL n 1 61 GLY n 1 62 ALA n 1 63 LYS n 1 64 PRO n 1 65 LEU n 1 66 SER n 1 67 GLY n 1 68 PHE n 1 69 SER n 1 70 GLN n 1 71 ILE n 1 72 ARG n 1 73 HIS n 1 74 GLU n 1 75 ILE n 1 76 PRO n 1 77 MET n 1 78 LEU n 1 79 SER n 1 80 LEU n 1 81 ASP n 1 82 ASN n 1 83 ALA n 1 84 PHE n 1 85 SER n 1 86 ASP n 1 87 ALA n 1 88 GLU n 1 89 PHE n 1 90 ASN n 1 91 ALA n 1 92 PHE n 1 93 VAL n 1 94 ALA n 1 95 ARG n 1 96 ILE n 1 97 GLU n 1 98 ASP n 1 99 ARG n 1 100 LEU n 1 101 ILE n 1 102 LEU n 1 103 LEU n 1 104 PRO n 1 105 ALA n 1 106 PRO n 1 107 LEU n 1 108 THR n 1 109 PHE n 1 110 CYS n 1 111 CYS n 1 112 GLU n 1 113 PRO n 1 114 LYS n 1 115 LEU n 1 116 ASP n 1 117 GLY n 1 118 LEU n 1 119 ALA n 1 120 VAL n 1 121 SER n 1 122 ILE n 1 123 LEU n 1 124 TYR n 1 125 VAL n 1 126 ASN n 1 127 GLY n 1 128 GLU n 1 129 LEU n 1 130 THR n 1 131 GLN n 1 132 ALA n 1 133 ALA n 1 134 THR n 1 135 ARG n 1 136 GLY n 1 137 ASP n 1 138 GLY n 1 139 THR n 1 140 THR n 1 141 GLY n 1 142 GLU n 1 143 ASP n 1 144 ILE n 1 145 THR n 1 146 ALA n 1 147 ASN n 1 148 ILE n 1 149 ARG n 1 150 THR n 1 151 ILE n 1 152 ARG n 1 153 ASN n 1 154 VAL n 1 155 PRO n 1 156 LEU n 1 157 GLN n 1 158 LEU n 1 159 LEU n 1 160 THR n 1 161 ASP n 1 162 ASN n 1 163 PRO n 1 164 PRO n 1 165 ALA n 1 166 ARG n 1 167 LEU n 1 168 GLU n 1 169 VAL n 1 170 ARG n 1 171 GLY n 1 172 GLU n 1 173 VAL n 1 174 PHE n 1 175 MET n 1 176 PRO n 1 177 HIS n 1 178 ALA n 1 179 GLY n 1 180 PHE n 1 181 GLU n 1 182 ARG n 1 183 LEU n 1 184 ASN n 1 185 LYS n 1 186 TYR n 1 187 ALA n 1 188 LEU n 1 189 GLU n 1 190 HIS n 1 191 ASN n 1 192 GLU n 1 193 LYS n 1 194 THR n 1 195 PHE n 1 196 ALA n 1 197 ASN n 1 198 PRO n 1 199 ARG n 1 200 ASN n 1 201 ALA n 1 202 ALA n 1 203 ALA n 1 204 GLY n 1 205 SER n 1 206 LEU n 1 207 ARG n 1 208 GLN n 1 209 LEU n 1 210 ASP n 1 211 PRO n 1 212 ASN n 1 213 ILE n 1 214 THR n 1 215 SER n 1 216 LYS n 1 217 ARG n 1 218 PRO n 1 219 LEU n 1 220 VAL n 1 221 LEU n 1 222 ASN n 1 223 ALA n 1 224 TYR n 1 225 GLY n 1 226 ILE n 1 227 GLY n 1 228 ILE n 1 229 ALA n 1 230 GLU n 1 231 GLY n 1 232 VAL n 1 233 ASP n 1 234 LEU n 1 235 PRO n 1 236 THR n 1 237 THR n 1 238 HIS n 1 239 TYR n 1 240 ALA n 1 241 ARG n 1 242 LEU n 1 243 GLN n 1 244 TRP n 1 245 LEU n 1 246 LYS n 1 247 SER n 1 248 ILE n 1 249 GLY n 1 250 ILE n 1 251 PRO n 1 252 VAL n 1 253 ASN n 1 254 PRO n 1 255 GLU n 1 256 ILE n 1 257 ARG n 1 258 LEU n 1 259 CYS n 1 260 ASN n 1 261 GLY n 1 262 ALA n 1 263 ASP n 1 264 GLU n 1 265 VAL n 1 266 LEU n 1 267 GLY n 1 268 PHE n 1 269 TYR n 1 270 ARG n 1 271 ASP n 1 272 ILE n 1 273 GLN n 1 274 ASN n 1 275 LYS n 1 276 ARG n 1 277 SER n 1 278 SER n 1 279 LEU n 1 280 GLY n 1 281 TYR n 1 282 ASP n 1 283 ILE n 1 284 ASP n 1 285 GLY n 1 286 THR n 1 287 VAL n 1 288 LEU n 1 289 LYS n 1 290 ILE n 1 291 ASN n 1 292 ASP n 1 293 ILE n 1 294 ALA n 1 295 LEU n 1 296 GLN n 1 297 ASN n 1 298 GLU n 1 299 LEU n 1 300 GLY n 1 301 PHE n 1 302 ILE n 1 303 SER n 1 304 LYS n 1 305 ALA n 1 306 PRO n 1 307 ARG n 1 308 TRP n 1 309 ALA n 1 310 ILE n 1 311 ALA n 1 312 TYR n 1 313 LYS n 1 314 PHE n 1 315 PRO n 1 316 ALA n 1 317 GLN n 1 318 GLU n 1 319 GLU n 1 320 LEU n 1 321 THR n 1 322 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ligA, lig, ligN, HI_1100' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 51907 / DSM 11121 / KW20 / Rd' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Haemophilus influenzae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 71421 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DNLJ_HAEIN _struct_ref.pdbx_db_accession P43813 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NIQTQLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVGAKPLSGFSQIRHEIPMLSL DNAFSDAEFNAFVKRIEDRLILLPKPLTFCCEPKLDGLAVSILYVNGELTQAATRGDGTTGEDITANIRTIRNVPLQLLT DNPPARLEVRGEVFMPHAGFERLNKYALEHNEKTFANPRNAAAGSLRQLDPNITSKRPLVLNAYGIGIAEGVDLPTTHYA RLQWLKSIGIPVNPEIRLCNGADEVLGFYRDIQNKRSSLGYDIDGTVLKINDIALQNELGFISKAPRWAIAYKFPAQEEL TL ; _struct_ref.pdbx_align_begin 3 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3UQ8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 322 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P43813 _struct_ref_seq.db_align_beg 3 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 324 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 3 _struct_ref_seq.pdbx_auth_seq_align_end 324 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3UQ8 ALA A 94 ? UNP P43813 LYS 96 CONFLICT 96 1 1 3UQ8 ALA A 105 ? UNP P43813 LYS 107 CONFLICT 107 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 AMP non-polymer . 'ADENOSINE MONOPHOSPHATE' ? 'C10 H14 N5 O7 P' 347.221 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAD non-polymer . NICOTINAMIDE-ADENINE-DINUCLEOTIDE ? 'C21 H27 N7 O14 P2' 663.425 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3UQ8 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.75 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 55.27 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;The reservoir solution contained 16% (w/v) polyethylene glycol (PEG) 3500 and 350 mM sodium potassium tartrate. Hanging drops were set up at 18 C by mixing 2 l of protein solution with 2 l of the reservoir solution and crystals were observed within 3-4 days. , pH 7.5, VAPOR DIFFUSION, HANGING DROP ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 298.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.933 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-2' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.933 _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-2 # _reflns.entry_id 3UQ8 _reflns.observed_criterion_sigma_F 20 _reflns.observed_criterion_sigma_I 2 _reflns.d_resolution_high 1.7 _reflns.d_resolution_low 32.2 _reflns.number_all ? _reflns.number_obs 41079 _reflns.percent_possible_obs 90.69 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 3UQ8 _refine.ls_d_res_high 1.7000 _refine.ls_d_res_low 32.2000 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 90.6500 _refine.ls_number_reflns_obs 41079 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1868 _refine.ls_R_factor_R_work 0.1852 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2162 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_number_reflns_R_free 2070 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 14.6855 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.0000 _refine.aniso_B[2][2] 0.0000 _refine.aniso_B[3][3] -0.0100 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9490 _refine.correlation_coeff_Fo_to_Fc_free 0.9350 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.1050 _refine.overall_SU_ML 0.0640 _refine.overall_SU_B 1.9200 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 49.960 _refine.B_iso_min 5.100 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2551 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 66 _refine_hist.number_atoms_solvent 273 _refine_hist.number_atoms_total 2890 _refine_hist.d_res_high 1.7000 _refine_hist.d_res_low 32.2000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 2678 0.024 0.022 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 3653 2.021 2.006 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 321 5.692 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 129 33.212 24.186 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 435 12.088 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 21 14.549 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 409 0.155 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2052 0.011 0.021 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1612 1.222 1.500 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 2607 2.060 2.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 1066 3.343 3.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 1046 5.203 4.500 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.7000 _refine_ls_shell.d_res_low 1.7440 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 64.5400 _refine_ls_shell.number_reflns_R_work 1995 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2570 _refine_ls_shell.R_factor_R_free 0.2830 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 133 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2128 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3UQ8 _struct.title 'Structure of adenylation domain of Haemophilus influenzae DNA ligases bound to NAD+ in adenylated state.' _struct.pdbx_descriptor 'DNA ligase (E.C.6.5.1.2)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3UQ8 _struct_keywords.pdbx_keywords LIGASE _struct_keywords.text 'Adenylated protein, ATP-grasp, Rossmann fold, Adenylation, LIGASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 1 ? VAL A 22 ? ASN A 3 VAL A 24 1 ? 22 HELX_P HELX_P2 2 PRO A 29 ? HIS A 47 ? PRO A 31 HIS A 49 1 ? 19 HELX_P HELX_P3 3 PRO A 48 ? LEU A 51 ? PRO A 50 LEU A 53 5 ? 4 HELX_P HELX_P4 4 SER A 55 ? ARG A 59 ? SER A 57 ARG A 61 5 ? 5 HELX_P HELX_P5 5 SER A 85 ? LEU A 100 ? SER A 87 LEU A 102 1 ? 16 HELX_P HELX_P6 6 ILE A 144 ? THR A 150 ? ILE A 146 THR A 152 1 ? 7 HELX_P HELX_P7 7 PRO A 176 ? HIS A 190 ? PRO A 178 HIS A 192 1 ? 15 HELX_P HELX_P8 8 ASN A 197 ? ARG A 207 ? ASN A 199 ARG A 209 1 ? 11 HELX_P HELX_P9 9 ASP A 210 ? SER A 215 ? ASP A 212 SER A 217 1 ? 6 HELX_P HELX_P10 10 THR A 237 ? ILE A 248 ? THR A 239 ILE A 250 1 ? 12 HELX_P HELX_P11 11 GLY A 261 ? LYS A 275 ? GLY A 263 LYS A 277 1 ? 15 HELX_P HELX_P12 12 ASP A 292 ? GLY A 300 ? ASP A 294 GLY A 302 1 ? 9 HELX_P HELX_P13 13 ALA A 316 ? LEU A 320 ? ALA A 318 LEU A 322 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 114 _struct_conn.ptnr1_label_atom_id NZ _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_comp_id AMP _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id P _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 116 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id AMP _struct_conn.ptnr2_auth_seq_id 700 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.860 _struct_conn.pdbx_value_order ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ALA _struct_mon_prot_cis.label_seq_id 105 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ALA _struct_mon_prot_cis.auth_seq_id 107 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 106 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 108 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.03 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 4 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 70 ? ARG A 72 ? GLN A 72 ARG A 74 A 2 THR A 140 ? GLU A 142 ? THR A 142 GLU A 144 B 1 ASN A 82 ? ALA A 83 ? ASN A 84 ALA A 85 B 2 ALA A 309 ? LYS A 313 ? ALA A 311 LYS A 315 B 3 ILE A 283 ? ILE A 290 ? ILE A 285 ILE A 292 B 4 THR A 108 ? LEU A 115 ? THR A 110 LEU A 117 B 5 ARG A 257 ? ASN A 260 ? ARG A 259 ASN A 262 C 1 GLU A 128 ? THR A 134 ? GLU A 130 THR A 136 C 2 LEU A 118 ? VAL A 125 ? LEU A 120 VAL A 127 C 3 ARG A 166 ? PHE A 174 ? ARG A 168 PHE A 176 C 4 VAL A 220 ? GLU A 230 ? VAL A 222 GLU A 232 D 1 PHE A 301 ? ILE A 302 ? PHE A 303 ILE A 304 D 2 ALA A 305 ? PRO A 306 ? ALA A 307 PRO A 308 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 71 ? N ILE A 73 O GLY A 141 ? O GLY A 143 B 1 2 N ALA A 83 ? N ALA A 85 O ALA A 311 ? O ALA A 313 B 2 3 O ILE A 310 ? O ILE A 312 N LEU A 288 ? N LEU A 290 B 3 4 O LYS A 289 ? O LYS A 291 N CYS A 110 ? N CYS A 112 B 4 5 N PHE A 109 ? N PHE A 111 O CYS A 259 ? O CYS A 261 C 1 2 O GLN A 131 ? O GLN A 133 N LEU A 123 ? N LEU A 125 C 2 3 N VAL A 120 ? N VAL A 122 O GLY A 171 ? O GLY A 173 C 3 4 N ARG A 170 ? N ARG A 172 O TYR A 224 ? O TYR A 226 D 1 2 N ILE A 302 ? N ILE A 304 O ALA A 305 ? O ALA A 307 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 21 'BINDING SITE FOR RESIDUE NAD A 1' AC2 Software ? ? ? ? 18 'BINDING SITE FOR RESIDUE AMP A 700' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 21 TYR A 16 ? TYR A 18 . ? 1_555 ? 2 AC1 21 TYR A 20 ? TYR A 22 . ? 1_555 ? 3 AC1 21 PRO A 26 ? PRO A 28 . ? 1_555 ? 4 AC1 21 VAL A 28 ? VAL A 30 . ? 1_555 ? 5 AC1 21 PRO A 29 ? PRO A 31 . ? 1_555 ? 6 AC1 21 ASP A 30 ? ASP A 32 . ? 1_555 ? 7 AC1 21 TYR A 33 ? TYR A 35 . ? 1_555 ? 8 AC1 21 ASP A 34 ? ASP A 36 . ? 1_555 ? 9 AC1 21 PHE A 37 ? PHE A 39 . ? 1_555 ? 10 AC1 21 HIS A 38 ? HIS A 40 . ? 1_555 ? 11 AC1 21 LYS A 41 ? LYS A 43 . ? 1_555 ? 12 AC1 21 ARG A 152 ? ARG A 154 . ? 1_555 ? 13 AC1 21 HOH D . ? HOH A 358 . ? 1_555 ? 14 AC1 21 HOH D . ? HOH A 398 . ? 1_555 ? 15 AC1 21 HOH D . ? HOH A 432 . ? 1_555 ? 16 AC1 21 HOH D . ? HOH A 561 . ? 1_555 ? 17 AC1 21 HOH D . ? HOH A 563 . ? 1_555 ? 18 AC1 21 HOH D . ? HOH A 564 . ? 1_555 ? 19 AC1 21 HOH D . ? HOH A 569 . ? 1_555 ? 20 AC1 21 HOH D . ? HOH A 571 . ? 1_555 ? 21 AC1 21 HOH D . ? HOH A 579 . ? 1_555 ? 22 AC2 18 HOH D . ? HOH A 2 . ? 1_555 ? 23 AC2 18 LEU A 80 ? LEU A 82 . ? 1_555 ? 24 AC2 18 GLU A 112 ? GLU A 114 . ? 1_555 ? 25 AC2 18 LYS A 114 ? LYS A 116 . ? 1_555 ? 26 AC2 18 GLY A 117 ? GLY A 119 . ? 1_555 ? 27 AC2 18 ALA A 119 ? ALA A 121 . ? 1_555 ? 28 AC2 18 ARG A 135 ? ARG A 137 . ? 1_555 ? 29 AC2 18 GLU A 172 ? GLU A 174 . ? 1_555 ? 30 AC2 18 ARG A 199 ? ARG A 201 . ? 1_555 ? 31 AC2 18 TYR A 224 ? TYR A 226 . ? 1_555 ? 32 AC2 18 VAL A 287 ? VAL A 289 . ? 1_555 ? 33 AC2 18 LYS A 289 ? LYS A 291 . ? 1_555 ? 34 AC2 18 LEU A 322 ? LEU A 324 . ? 5_655 ? 35 AC2 18 HOH D . ? HOH A 330 . ? 1_555 ? 36 AC2 18 HOH D . ? HOH A 341 . ? 1_555 ? 37 AC2 18 HOH D . ? HOH A 404 . ? 1_555 ? 38 AC2 18 HOH D . ? HOH A 566 . ? 1_555 ? 39 AC2 18 HOH D . ? HOH A 573 . ? 1_555 ? # _atom_sites.entry_id 3UQ8 _atom_sites.fract_transf_matrix[1][1] 0.014238 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014238 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006200 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 3 3 ASN ASN A . n A 1 2 ILE 2 4 4 ILE ILE A . n A 1 3 GLN 3 5 5 GLN GLN A . n A 1 4 THR 4 6 6 THR THR A . n A 1 5 GLN 5 7 7 GLN GLN A . n A 1 6 LEU 6 8 8 LEU LEU A . n A 1 7 ASP 7 9 9 ASP ASP A . n A 1 8 ASN 8 10 10 ASN ASN A . n A 1 9 LEU 9 11 11 LEU LEU A . n A 1 10 ARG 10 12 12 ARG ARG A . n A 1 11 LYS 11 13 13 LYS LYS A . n A 1 12 THR 12 14 14 THR THR A . n A 1 13 LEU 13 15 15 LEU LEU A . n A 1 14 ARG 14 16 16 ARG ARG A . n A 1 15 GLN 15 17 17 GLN GLN A . n A 1 16 TYR 16 18 18 TYR TYR A . n A 1 17 GLU 17 19 19 GLU GLU A . n A 1 18 TYR 18 20 20 TYR TYR A . n A 1 19 GLU 19 21 21 GLU GLU A . n A 1 20 TYR 20 22 22 TYR TYR A . n A 1 21 HIS 21 23 23 HIS HIS A . n A 1 22 VAL 22 24 24 VAL VAL A . n A 1 23 LEU 23 25 25 LEU LEU A . n A 1 24 ASP 24 26 26 ASP ASP A . n A 1 25 ASN 25 27 27 ASN ASN A . n A 1 26 PRO 26 28 28 PRO PRO A . n A 1 27 SER 27 29 29 SER SER A . n A 1 28 VAL 28 30 30 VAL VAL A . n A 1 29 PRO 29 31 31 PRO PRO A . n A 1 30 ASP 30 32 32 ASP ASP A . n A 1 31 SER 31 33 33 SER SER A . n A 1 32 GLU 32 34 34 GLU GLU A . n A 1 33 TYR 33 35 35 TYR TYR A . n A 1 34 ASP 34 36 36 ASP ASP A . n A 1 35 ARG 35 37 37 ARG ARG A . n A 1 36 LEU 36 38 38 LEU LEU A . n A 1 37 PHE 37 39 39 PHE PHE A . n A 1 38 HIS 38 40 40 HIS HIS A . n A 1 39 GLN 39 41 41 GLN GLN A . n A 1 40 LEU 40 42 42 LEU LEU A . n A 1 41 LYS 41 43 43 LYS LYS A . n A 1 42 ALA 42 44 44 ALA ALA A . n A 1 43 LEU 43 45 45 LEU LEU A . n A 1 44 GLU 44 46 46 GLU GLU A . n A 1 45 LEU 45 47 47 LEU LEU A . n A 1 46 GLU 46 48 48 GLU GLU A . n A 1 47 HIS 47 49 49 HIS HIS A . n A 1 48 PRO 48 50 50 PRO PRO A . n A 1 49 GLU 49 51 51 GLU GLU A . n A 1 50 PHE 50 52 52 PHE PHE A . n A 1 51 LEU 51 53 53 LEU LEU A . n A 1 52 THR 52 54 54 THR THR A . n A 1 53 SER 53 55 55 SER SER A . n A 1 54 ASP 54 56 56 ASP ASP A . n A 1 55 SER 55 57 57 SER SER A . n A 1 56 PRO 56 58 58 PRO PRO A . n A 1 57 THR 57 59 59 THR THR A . n A 1 58 GLN 58 60 60 GLN GLN A . n A 1 59 ARG 59 61 61 ARG ARG A . n A 1 60 VAL 60 62 62 VAL VAL A . n A 1 61 GLY 61 63 63 GLY GLY A . n A 1 62 ALA 62 64 64 ALA ALA A . n A 1 63 LYS 63 65 65 LYS LYS A . n A 1 64 PRO 64 66 66 PRO PRO A . n A 1 65 LEU 65 67 67 LEU LEU A . n A 1 66 SER 66 68 68 SER SER A . n A 1 67 GLY 67 69 69 GLY GLY A . n A 1 68 PHE 68 70 70 PHE PHE A . n A 1 69 SER 69 71 71 SER SER A . n A 1 70 GLN 70 72 72 GLN GLN A . n A 1 71 ILE 71 73 73 ILE ILE A . n A 1 72 ARG 72 74 74 ARG ARG A . n A 1 73 HIS 73 75 75 HIS HIS A . n A 1 74 GLU 74 76 76 GLU GLU A . n A 1 75 ILE 75 77 77 ILE ILE A . n A 1 76 PRO 76 78 78 PRO PRO A . n A 1 77 MET 77 79 79 MET MET A . n A 1 78 LEU 78 80 80 LEU LEU A . n A 1 79 SER 79 81 81 SER SER A . n A 1 80 LEU 80 82 82 LEU LEU A . n A 1 81 ASP 81 83 83 ASP ASP A . n A 1 82 ASN 82 84 84 ASN ASN A . n A 1 83 ALA 83 85 85 ALA ALA A . n A 1 84 PHE 84 86 86 PHE PHE A . n A 1 85 SER 85 87 87 SER SER A . n A 1 86 ASP 86 88 88 ASP ASP A . n A 1 87 ALA 87 89 89 ALA ALA A . n A 1 88 GLU 88 90 90 GLU GLU A . n A 1 89 PHE 89 91 91 PHE PHE A . n A 1 90 ASN 90 92 92 ASN ASN A . n A 1 91 ALA 91 93 93 ALA ALA A . n A 1 92 PHE 92 94 94 PHE PHE A . n A 1 93 VAL 93 95 95 VAL VAL A . n A 1 94 ALA 94 96 96 ALA ALA A . n A 1 95 ARG 95 97 97 ARG ARG A . n A 1 96 ILE 96 98 98 ILE ILE A . n A 1 97 GLU 97 99 99 GLU GLU A . n A 1 98 ASP 98 100 100 ASP ASP A . n A 1 99 ARG 99 101 101 ARG ARG A . n A 1 100 LEU 100 102 102 LEU LEU A . n A 1 101 ILE 101 103 103 ILE ILE A . n A 1 102 LEU 102 104 104 LEU LEU A . n A 1 103 LEU 103 105 105 LEU LEU A . n A 1 104 PRO 104 106 106 PRO PRO A . n A 1 105 ALA 105 107 107 ALA ALA A . n A 1 106 PRO 106 108 108 PRO PRO A . n A 1 107 LEU 107 109 109 LEU LEU A . n A 1 108 THR 108 110 110 THR THR A . n A 1 109 PHE 109 111 111 PHE PHE A . n A 1 110 CYS 110 112 112 CYS CYS A . n A 1 111 CYS 111 113 113 CYS CYS A . n A 1 112 GLU 112 114 114 GLU GLU A . n A 1 113 PRO 113 115 115 PRO PRO A . n A 1 114 LYS 114 116 116 LYS LYS A . n A 1 115 LEU 115 117 117 LEU LEU A . n A 1 116 ASP 116 118 118 ASP ASP A . n A 1 117 GLY 117 119 119 GLY GLY A . n A 1 118 LEU 118 120 120 LEU LEU A . n A 1 119 ALA 119 121 121 ALA ALA A . n A 1 120 VAL 120 122 122 VAL VAL A . n A 1 121 SER 121 123 123 SER SER A . n A 1 122 ILE 122 124 124 ILE ILE A . n A 1 123 LEU 123 125 125 LEU LEU A . n A 1 124 TYR 124 126 126 TYR TYR A . n A 1 125 VAL 125 127 127 VAL VAL A . n A 1 126 ASN 126 128 128 ASN ASN A . n A 1 127 GLY 127 129 129 GLY GLY A . n A 1 128 GLU 128 130 130 GLU GLU A . n A 1 129 LEU 129 131 131 LEU LEU A . n A 1 130 THR 130 132 132 THR THR A . n A 1 131 GLN 131 133 133 GLN GLN A . n A 1 132 ALA 132 134 134 ALA ALA A . n A 1 133 ALA 133 135 135 ALA ALA A . n A 1 134 THR 134 136 136 THR THR A . n A 1 135 ARG 135 137 137 ARG ARG A . n A 1 136 GLY 136 138 138 GLY GLY A . n A 1 137 ASP 137 139 139 ASP ASP A . n A 1 138 GLY 138 140 140 GLY GLY A . n A 1 139 THR 139 141 141 THR THR A . n A 1 140 THR 140 142 142 THR THR A . n A 1 141 GLY 141 143 143 GLY GLY A . n A 1 142 GLU 142 144 144 GLU GLU A . n A 1 143 ASP 143 145 145 ASP ASP A . n A 1 144 ILE 144 146 146 ILE ILE A . n A 1 145 THR 145 147 147 THR THR A . n A 1 146 ALA 146 148 148 ALA ALA A . n A 1 147 ASN 147 149 149 ASN ASN A . n A 1 148 ILE 148 150 150 ILE ILE A . n A 1 149 ARG 149 151 151 ARG ARG A . n A 1 150 THR 150 152 152 THR THR A . n A 1 151 ILE 151 153 153 ILE ILE A . n A 1 152 ARG 152 154 154 ARG ARG A . n A 1 153 ASN 153 155 155 ASN ASN A . n A 1 154 VAL 154 156 156 VAL VAL A . n A 1 155 PRO 155 157 157 PRO PRO A . n A 1 156 LEU 156 158 158 LEU LEU A . n A 1 157 GLN 157 159 159 GLN GLN A . n A 1 158 LEU 158 160 160 LEU LEU A . n A 1 159 LEU 159 161 161 LEU LEU A . n A 1 160 THR 160 162 162 THR THR A . n A 1 161 ASP 161 163 163 ASP ASP A . n A 1 162 ASN 162 164 164 ASN ASN A . n A 1 163 PRO 163 165 165 PRO PRO A . n A 1 164 PRO 164 166 166 PRO PRO A . n A 1 165 ALA 165 167 167 ALA ALA A . n A 1 166 ARG 166 168 168 ARG ARG A . n A 1 167 LEU 167 169 169 LEU LEU A . n A 1 168 GLU 168 170 170 GLU GLU A . n A 1 169 VAL 169 171 171 VAL VAL A . n A 1 170 ARG 170 172 172 ARG ARG A . n A 1 171 GLY 171 173 173 GLY GLY A . n A 1 172 GLU 172 174 174 GLU GLU A . n A 1 173 VAL 173 175 175 VAL VAL A . n A 1 174 PHE 174 176 176 PHE PHE A . n A 1 175 MET 175 177 177 MET MET A . n A 1 176 PRO 176 178 178 PRO PRO A . n A 1 177 HIS 177 179 179 HIS HIS A . n A 1 178 ALA 178 180 180 ALA ALA A . n A 1 179 GLY 179 181 181 GLY GLY A . n A 1 180 PHE 180 182 182 PHE PHE A . n A 1 181 GLU 181 183 183 GLU GLU A . n A 1 182 ARG 182 184 184 ARG ARG A . n A 1 183 LEU 183 185 185 LEU LEU A . n A 1 184 ASN 184 186 186 ASN ASN A . n A 1 185 LYS 185 187 187 LYS LYS A . n A 1 186 TYR 186 188 188 TYR TYR A . n A 1 187 ALA 187 189 189 ALA ALA A . n A 1 188 LEU 188 190 190 LEU LEU A . n A 1 189 GLU 189 191 191 GLU GLU A . n A 1 190 HIS 190 192 192 HIS HIS A . n A 1 191 ASN 191 193 193 ASN ASN A . n A 1 192 GLU 192 194 194 GLU GLU A . n A 1 193 LYS 193 195 195 LYS LYS A . n A 1 194 THR 194 196 196 THR THR A . n A 1 195 PHE 195 197 197 PHE PHE A . n A 1 196 ALA 196 198 198 ALA ALA A . n A 1 197 ASN 197 199 199 ASN ASN A . n A 1 198 PRO 198 200 200 PRO PRO A . n A 1 199 ARG 199 201 201 ARG ARG A . n A 1 200 ASN 200 202 202 ASN ASN A . n A 1 201 ALA 201 203 203 ALA ALA A . n A 1 202 ALA 202 204 204 ALA ALA A . n A 1 203 ALA 203 205 205 ALA ALA A . n A 1 204 GLY 204 206 206 GLY GLY A . n A 1 205 SER 205 207 207 SER SER A . n A 1 206 LEU 206 208 208 LEU LEU A . n A 1 207 ARG 207 209 209 ARG ARG A . n A 1 208 GLN 208 210 210 GLN GLN A . n A 1 209 LEU 209 211 211 LEU LEU A . n A 1 210 ASP 210 212 212 ASP ASP A . n A 1 211 PRO 211 213 213 PRO PRO A . n A 1 212 ASN 212 214 214 ASN ASN A . n A 1 213 ILE 213 215 215 ILE ILE A . n A 1 214 THR 214 216 216 THR THR A . n A 1 215 SER 215 217 217 SER SER A . n A 1 216 LYS 216 218 218 LYS LYS A . n A 1 217 ARG 217 219 219 ARG ARG A . n A 1 218 PRO 218 220 220 PRO PRO A . n A 1 219 LEU 219 221 221 LEU LEU A . n A 1 220 VAL 220 222 222 VAL VAL A . n A 1 221 LEU 221 223 223 LEU LEU A . n A 1 222 ASN 222 224 224 ASN ASN A . n A 1 223 ALA 223 225 225 ALA ALA A . n A 1 224 TYR 224 226 226 TYR TYR A . n A 1 225 GLY 225 227 227 GLY GLY A . n A 1 226 ILE 226 228 228 ILE ILE A . n A 1 227 GLY 227 229 229 GLY GLY A . n A 1 228 ILE 228 230 230 ILE ILE A . n A 1 229 ALA 229 231 231 ALA ALA A . n A 1 230 GLU 230 232 232 GLU GLU A . n A 1 231 GLY 231 233 233 GLY GLY A . n A 1 232 VAL 232 234 234 VAL VAL A . n A 1 233 ASP 233 235 235 ASP ASP A . n A 1 234 LEU 234 236 236 LEU LEU A . n A 1 235 PRO 235 237 237 PRO PRO A . n A 1 236 THR 236 238 238 THR THR A . n A 1 237 THR 237 239 239 THR THR A . n A 1 238 HIS 238 240 240 HIS HIS A . n A 1 239 TYR 239 241 241 TYR TYR A . n A 1 240 ALA 240 242 242 ALA ALA A . n A 1 241 ARG 241 243 243 ARG ARG A . n A 1 242 LEU 242 244 244 LEU LEU A . n A 1 243 GLN 243 245 245 GLN GLN A . n A 1 244 TRP 244 246 246 TRP TRP A . n A 1 245 LEU 245 247 247 LEU LEU A . n A 1 246 LYS 246 248 248 LYS LYS A . n A 1 247 SER 247 249 249 SER SER A . n A 1 248 ILE 248 250 250 ILE ILE A . n A 1 249 GLY 249 251 251 GLY GLY A . n A 1 250 ILE 250 252 252 ILE ILE A . n A 1 251 PRO 251 253 253 PRO PRO A . n A 1 252 VAL 252 254 254 VAL VAL A . n A 1 253 ASN 253 255 255 ASN ASN A . n A 1 254 PRO 254 256 256 PRO PRO A . n A 1 255 GLU 255 257 257 GLU GLU A . n A 1 256 ILE 256 258 258 ILE ILE A . n A 1 257 ARG 257 259 259 ARG ARG A . n A 1 258 LEU 258 260 260 LEU LEU A . n A 1 259 CYS 259 261 261 CYS CYS A . n A 1 260 ASN 260 262 262 ASN ASN A . n A 1 261 GLY 261 263 263 GLY GLY A . n A 1 262 ALA 262 264 264 ALA ALA A . n A 1 263 ASP 263 265 265 ASP ASP A . n A 1 264 GLU 264 266 266 GLU GLU A . n A 1 265 VAL 265 267 267 VAL VAL A . n A 1 266 LEU 266 268 268 LEU LEU A . n A 1 267 GLY 267 269 269 GLY GLY A . n A 1 268 PHE 268 270 270 PHE PHE A . n A 1 269 TYR 269 271 271 TYR TYR A . n A 1 270 ARG 270 272 272 ARG ARG A . n A 1 271 ASP 271 273 273 ASP ASP A . n A 1 272 ILE 272 274 274 ILE ILE A . n A 1 273 GLN 273 275 275 GLN GLN A . n A 1 274 ASN 274 276 276 ASN ASN A . n A 1 275 LYS 275 277 277 LYS LYS A . n A 1 276 ARG 276 278 278 ARG ARG A . n A 1 277 SER 277 279 279 SER SER A . n A 1 278 SER 278 280 280 SER SER A . n A 1 279 LEU 279 281 281 LEU LEU A . n A 1 280 GLY 280 282 282 GLY GLY A . n A 1 281 TYR 281 283 283 TYR TYR A . n A 1 282 ASP 282 284 284 ASP ASP A . n A 1 283 ILE 283 285 285 ILE ILE A . n A 1 284 ASP 284 286 286 ASP ASP A . n A 1 285 GLY 285 287 287 GLY GLY A . n A 1 286 THR 286 288 288 THR THR A . n A 1 287 VAL 287 289 289 VAL VAL A . n A 1 288 LEU 288 290 290 LEU LEU A . n A 1 289 LYS 289 291 291 LYS LYS A . n A 1 290 ILE 290 292 292 ILE ILE A . n A 1 291 ASN 291 293 293 ASN ASN A . n A 1 292 ASP 292 294 294 ASP ASP A . n A 1 293 ILE 293 295 295 ILE ILE A . n A 1 294 ALA 294 296 296 ALA ALA A . n A 1 295 LEU 295 297 297 LEU LEU A . n A 1 296 GLN 296 298 298 GLN GLN A . n A 1 297 ASN 297 299 299 ASN ASN A . n A 1 298 GLU 298 300 300 GLU GLU A . n A 1 299 LEU 299 301 301 LEU LEU A . n A 1 300 GLY 300 302 302 GLY GLY A . n A 1 301 PHE 301 303 303 PHE PHE A . n A 1 302 ILE 302 304 304 ILE ILE A . n A 1 303 SER 303 305 305 SER SER A . n A 1 304 LYS 304 306 306 LYS LYS A . n A 1 305 ALA 305 307 307 ALA ALA A . n A 1 306 PRO 306 308 308 PRO PRO A . n A 1 307 ARG 307 309 309 ARG ARG A . n A 1 308 TRP 308 310 310 TRP TRP A . n A 1 309 ALA 309 311 311 ALA ALA A . n A 1 310 ILE 310 312 312 ILE ILE A . n A 1 311 ALA 311 313 313 ALA ALA A . n A 1 312 TYR 312 314 314 TYR TYR A . n A 1 313 LYS 313 315 315 LYS LYS A . n A 1 314 PHE 314 316 316 PHE PHE A . n A 1 315 PRO 315 317 317 PRO PRO A . n A 1 316 ALA 316 318 318 ALA ALA A . n A 1 317 GLN 317 319 319 GLN GLN A . n A 1 318 GLU 318 320 320 GLU GLU A . n A 1 319 GLU 319 321 321 GLU GLU A . n A 1 320 LEU 320 322 322 LEU LEU A . n A 1 321 THR 321 323 323 THR THR A . n A 1 322 LEU 322 324 324 LEU LEU A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-01-25 2 'Structure model' 1 1 2012-03-28 3 'Structure model' 1 2 2014-11-12 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Structure summary' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MOSFLM . ? package 'Andrew G.W. Leslie' andrew@mrc-lmb.cam.ac.uk 'data reduction' http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ ? ? 2 REFMAC 5.5.0109 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 3 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 5 SCALA . ? ? ? ? 'data scaling' ? ? ? 6 AMoRE . ? ? ? ? phasing ? ? ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 360 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 383 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.98 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 16 ? ? CZ A ARG 16 ? ? NH2 A ARG 16 ? ? 115.61 120.30 -4.69 0.50 N 2 1 CD A LYS 116 ? ? CE A LYS 116 ? ? NZ A LYS 116 ? ? 96.26 111.70 -15.44 2.30 N 3 1 OE1 A GLU 174 ? ? CD A GLU 174 ? ? OE2 A GLU 174 ? ? 115.80 123.30 -7.50 1.20 N 4 1 NE A ARG 278 ? ? CZ A ARG 278 ? ? NH2 A ARG 278 ? ? 117.25 120.30 -3.05 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 27 ? ? -156.16 72.96 2 1 THR A 162 ? ? -173.27 144.07 3 1 LYS A 306 ? ? 74.01 -0.45 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 NICOTINAMIDE-ADENINE-DINUCLEOTIDE NAD 3 'ADENOSINE MONOPHOSPHATE' AMP 4 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAD 1 1 1 NAD NAD A . C 3 AMP 1 700 700 AMP AMP A . D 4 HOH 1 2 2 HOH HOH A . D 4 HOH 2 325 1 HOH HOH A . D 4 HOH 3 326 4 HOH HOH A . D 4 HOH 4 327 5 HOH HOH A . D 4 HOH 5 328 6 HOH HOH A . D 4 HOH 6 329 9 HOH HOH A . D 4 HOH 7 330 10 HOH HOH A . D 4 HOH 8 331 12 HOH HOH A . D 4 HOH 9 332 13 HOH HOH A . D 4 HOH 10 333 14 HOH HOH A . D 4 HOH 11 334 15 HOH HOH A . D 4 HOH 12 335 16 HOH HOH A . D 4 HOH 13 336 17 HOH HOH A . D 4 HOH 14 337 18 HOH HOH A . D 4 HOH 15 338 19 HOH HOH A . D 4 HOH 16 339 20 HOH HOH A . D 4 HOH 17 340 21 HOH HOH A . D 4 HOH 18 341 22 HOH HOH A . D 4 HOH 19 342 23 HOH HOH A . D 4 HOH 20 343 24 HOH HOH A . D 4 HOH 21 344 25 HOH HOH A . D 4 HOH 22 345 26 HOH HOH A . D 4 HOH 23 346 27 HOH HOH A . D 4 HOH 24 347 28 HOH HOH A . D 4 HOH 25 348 29 HOH HOH A . D 4 HOH 26 349 30 HOH HOH A . D 4 HOH 27 350 31 HOH HOH A . D 4 HOH 28 351 32 HOH HOH A . D 4 HOH 29 352 33 HOH HOH A . D 4 HOH 30 353 34 HOH HOH A . D 4 HOH 31 354 35 HOH HOH A . D 4 HOH 32 355 36 HOH HOH A . D 4 HOH 33 356 37 HOH HOH A . D 4 HOH 34 357 38 HOH HOH A . D 4 HOH 35 358 39 HOH HOH A . D 4 HOH 36 359 40 HOH HOH A . D 4 HOH 37 360 41 HOH HOH A . D 4 HOH 38 361 42 HOH HOH A . D 4 HOH 39 362 44 HOH HOH A . D 4 HOH 40 363 45 HOH HOH A . D 4 HOH 41 364 46 HOH HOH A . D 4 HOH 42 365 47 HOH HOH A . D 4 HOH 43 366 48 HOH HOH A . D 4 HOH 44 367 49 HOH HOH A . D 4 HOH 45 368 50 HOH HOH A . D 4 HOH 46 369 51 HOH HOH A . D 4 HOH 47 370 52 HOH HOH A . D 4 HOH 48 371 53 HOH HOH A . D 4 HOH 49 372 54 HOH HOH A . D 4 HOH 50 373 55 HOH HOH A . D 4 HOH 51 374 56 HOH HOH A . D 4 HOH 52 375 57 HOH HOH A . D 4 HOH 53 376 58 HOH HOH A . D 4 HOH 54 377 59 HOH HOH A . D 4 HOH 55 378 60 HOH HOH A . D 4 HOH 56 379 61 HOH HOH A . D 4 HOH 57 380 62 HOH HOH A . D 4 HOH 58 381 63 HOH HOH A . D 4 HOH 59 382 64 HOH HOH A . D 4 HOH 60 383 65 HOH HOH A . D 4 HOH 61 384 66 HOH HOH A . D 4 HOH 62 385 67 HOH HOH A . D 4 HOH 63 386 68 HOH HOH A . D 4 HOH 64 387 69 HOH HOH A . D 4 HOH 65 388 70 HOH HOH A . D 4 HOH 66 389 71 HOH HOH A . D 4 HOH 67 390 72 HOH HOH A . D 4 HOH 68 391 73 HOH HOH A . D 4 HOH 69 392 74 HOH HOH A . D 4 HOH 70 393 75 HOH HOH A . D 4 HOH 71 394 76 HOH HOH A . D 4 HOH 72 395 77 HOH HOH A . D 4 HOH 73 396 78 HOH HOH A . D 4 HOH 74 397 79 HOH HOH A . D 4 HOH 75 398 80 HOH HOH A . D 4 HOH 76 399 81 HOH HOH A . D 4 HOH 77 400 82 HOH HOH A . D 4 HOH 78 401 83 HOH HOH A . D 4 HOH 79 402 84 HOH HOH A . D 4 HOH 80 403 85 HOH HOH A . D 4 HOH 81 404 86 HOH HOH A . D 4 HOH 82 405 87 HOH HOH A . D 4 HOH 83 406 88 HOH HOH A . D 4 HOH 84 407 89 HOH HOH A . D 4 HOH 85 408 90 HOH HOH A . D 4 HOH 86 409 91 HOH HOH A . D 4 HOH 87 410 92 HOH HOH A . D 4 HOH 88 411 93 HOH HOH A . D 4 HOH 89 412 94 HOH HOH A . D 4 HOH 90 413 95 HOH HOH A . D 4 HOH 91 414 96 HOH HOH A . D 4 HOH 92 415 97 HOH HOH A . D 4 HOH 93 416 98 HOH HOH A . D 4 HOH 94 417 99 HOH HOH A . D 4 HOH 95 418 100 HOH HOH A . D 4 HOH 96 419 101 HOH HOH A . D 4 HOH 97 420 102 HOH HOH A . D 4 HOH 98 421 103 HOH HOH A . D 4 HOH 99 422 104 HOH HOH A . D 4 HOH 100 423 105 HOH HOH A . D 4 HOH 101 424 106 HOH HOH A . D 4 HOH 102 425 107 HOH HOH A . D 4 HOH 103 426 108 HOH HOH A . D 4 HOH 104 427 109 HOH HOH A . D 4 HOH 105 428 110 HOH HOH A . D 4 HOH 106 429 111 HOH HOH A . D 4 HOH 107 430 112 HOH HOH A . D 4 HOH 108 431 113 HOH HOH A . D 4 HOH 109 432 114 HOH HOH A . D 4 HOH 110 433 115 HOH HOH A . D 4 HOH 111 434 116 HOH HOH A . D 4 HOH 112 435 117 HOH HOH A . D 4 HOH 113 436 118 HOH HOH A . D 4 HOH 114 437 119 HOH HOH A . D 4 HOH 115 438 120 HOH HOH A . D 4 HOH 116 439 121 HOH HOH A . D 4 HOH 117 440 122 HOH HOH A . D 4 HOH 118 441 123 HOH HOH A . D 4 HOH 119 442 124 HOH HOH A . D 4 HOH 120 443 125 HOH HOH A . D 4 HOH 121 444 126 HOH HOH A . D 4 HOH 122 445 127 HOH HOH A . D 4 HOH 123 446 128 HOH HOH A . D 4 HOH 124 447 129 HOH HOH A . D 4 HOH 125 448 130 HOH HOH A . D 4 HOH 126 449 131 HOH HOH A . D 4 HOH 127 450 132 HOH HOH A . D 4 HOH 128 451 133 HOH HOH A . D 4 HOH 129 452 135 HOH HOH A . D 4 HOH 130 453 137 HOH HOH A . D 4 HOH 131 454 138 HOH HOH A . D 4 HOH 132 455 139 HOH HOH A . D 4 HOH 133 456 140 HOH HOH A . D 4 HOH 134 457 141 HOH HOH A . D 4 HOH 135 458 142 HOH HOH A . D 4 HOH 136 459 143 HOH HOH A . D 4 HOH 137 460 144 HOH HOH A . D 4 HOH 138 461 145 HOH HOH A . D 4 HOH 139 462 146 HOH HOH A . D 4 HOH 140 463 147 HOH HOH A . D 4 HOH 141 464 148 HOH HOH A . D 4 HOH 142 465 149 HOH HOH A . D 4 HOH 143 466 150 HOH HOH A . D 4 HOH 144 467 151 HOH HOH A . D 4 HOH 145 468 152 HOH HOH A . D 4 HOH 146 469 153 HOH HOH A . D 4 HOH 147 470 154 HOH HOH A . D 4 HOH 148 471 155 HOH HOH A . D 4 HOH 149 472 156 HOH HOH A . D 4 HOH 150 473 157 HOH HOH A . D 4 HOH 151 474 158 HOH HOH A . D 4 HOH 152 475 159 HOH HOH A . D 4 HOH 153 476 161 HOH HOH A . D 4 HOH 154 477 162 HOH HOH A . D 4 HOH 155 478 163 HOH HOH A . D 4 HOH 156 479 164 HOH HOH A . D 4 HOH 157 480 165 HOH HOH A . D 4 HOH 158 481 166 HOH HOH A . D 4 HOH 159 482 167 HOH HOH A . D 4 HOH 160 483 168 HOH HOH A . D 4 HOH 161 484 169 HOH HOH A . D 4 HOH 162 485 170 HOH HOH A . D 4 HOH 163 486 171 HOH HOH A . D 4 HOH 164 487 172 HOH HOH A . D 4 HOH 165 488 173 HOH HOH A . D 4 HOH 166 489 175 HOH HOH A . D 4 HOH 167 490 176 HOH HOH A . D 4 HOH 168 491 177 HOH HOH A . D 4 HOH 169 492 178 HOH HOH A . D 4 HOH 170 493 179 HOH HOH A . D 4 HOH 171 494 180 HOH HOH A . D 4 HOH 172 495 181 HOH HOH A . D 4 HOH 173 496 182 HOH HOH A . D 4 HOH 174 497 183 HOH HOH A . D 4 HOH 175 498 185 HOH HOH A . D 4 HOH 176 499 186 HOH HOH A . D 4 HOH 177 500 187 HOH HOH A . D 4 HOH 178 501 188 HOH HOH A . D 4 HOH 179 502 189 HOH HOH A . D 4 HOH 180 503 190 HOH HOH A . D 4 HOH 181 504 191 HOH HOH A . D 4 HOH 182 505 192 HOH HOH A . D 4 HOH 183 506 193 HOH HOH A . D 4 HOH 184 507 194 HOH HOH A . D 4 HOH 185 508 195 HOH HOH A . D 4 HOH 186 509 196 HOH HOH A . D 4 HOH 187 510 197 HOH HOH A . D 4 HOH 188 511 198 HOH HOH A . D 4 HOH 189 512 199 HOH HOH A . D 4 HOH 190 513 200 HOH HOH A . D 4 HOH 191 514 201 HOH HOH A . D 4 HOH 192 515 202 HOH HOH A . D 4 HOH 193 516 203 HOH HOH A . D 4 HOH 194 517 204 HOH HOH A . D 4 HOH 195 518 205 HOH HOH A . D 4 HOH 196 519 206 HOH HOH A . D 4 HOH 197 520 207 HOH HOH A . D 4 HOH 198 521 208 HOH HOH A . D 4 HOH 199 522 209 HOH HOH A . D 4 HOH 200 523 210 HOH HOH A . D 4 HOH 201 524 211 HOH HOH A . D 4 HOH 202 525 212 HOH HOH A . D 4 HOH 203 526 214 HOH HOH A . D 4 HOH 204 527 215 HOH HOH A . D 4 HOH 205 528 216 HOH HOH A . D 4 HOH 206 529 217 HOH HOH A . D 4 HOH 207 530 218 HOH HOH A . D 4 HOH 208 531 219 HOH HOH A . D 4 HOH 209 532 220 HOH HOH A . D 4 HOH 210 533 221 HOH HOH A . D 4 HOH 211 534 222 HOH HOH A . D 4 HOH 212 535 223 HOH HOH A . D 4 HOH 213 536 224 HOH HOH A . D 4 HOH 214 537 225 HOH HOH A . D 4 HOH 215 538 226 HOH HOH A . D 4 HOH 216 539 227 HOH HOH A . D 4 HOH 217 540 228 HOH HOH A . D 4 HOH 218 541 229 HOH HOH A . D 4 HOH 219 542 230 HOH HOH A . D 4 HOH 220 543 231 HOH HOH A . D 4 HOH 221 544 232 HOH HOH A . D 4 HOH 222 545 233 HOH HOH A . D 4 HOH 223 546 234 HOH HOH A . D 4 HOH 224 547 235 HOH HOH A . D 4 HOH 225 548 236 HOH HOH A . D 4 HOH 226 549 237 HOH HOH A . D 4 HOH 227 550 238 HOH HOH A . D 4 HOH 228 551 239 HOH HOH A . D 4 HOH 229 552 240 HOH HOH A . D 4 HOH 230 553 241 HOH HOH A . D 4 HOH 231 554 242 HOH HOH A . D 4 HOH 232 555 244 HOH HOH A . D 4 HOH 233 556 245 HOH HOH A . D 4 HOH 234 557 246 HOH HOH A . D 4 HOH 235 558 247 HOH HOH A . D 4 HOH 236 559 248 HOH HOH A . D 4 HOH 237 560 249 HOH HOH A . D 4 HOH 238 561 250 HOH HOH A . D 4 HOH 239 562 251 HOH HOH A . D 4 HOH 240 563 252 HOH HOH A . D 4 HOH 241 564 253 HOH HOH A . D 4 HOH 242 565 256 HOH HOH A . D 4 HOH 243 566 257 HOH HOH A . D 4 HOH 244 567 258 HOH HOH A . D 4 HOH 245 568 259 HOH HOH A . D 4 HOH 246 569 260 HOH HOH A . D 4 HOH 247 570 261 HOH HOH A . D 4 HOH 248 571 262 HOH HOH A . D 4 HOH 249 572 263 HOH HOH A . D 4 HOH 250 573 264 HOH HOH A . D 4 HOH 251 574 265 HOH HOH A . D 4 HOH 252 575 266 HOH HOH A . D 4 HOH 253 576 267 HOH HOH A . D 4 HOH 254 577 268 HOH HOH A . D 4 HOH 255 578 269 HOH HOH A . D 4 HOH 256 579 270 HOH HOH A . D 4 HOH 257 580 271 HOH HOH A . D 4 HOH 258 581 272 HOH HOH A . D 4 HOH 259 582 273 HOH HOH A . D 4 HOH 260 583 274 HOH HOH A . D 4 HOH 261 584 275 HOH HOH A . D 4 HOH 262 585 276 HOH HOH A . D 4 HOH 263 586 277 HOH HOH A . D 4 HOH 264 587 278 HOH HOH A . D 4 HOH 265 588 279 HOH HOH A . D 4 HOH 266 589 280 HOH HOH A . D 4 HOH 267 590 281 HOH HOH A . D 4 HOH 268 591 282 HOH HOH A . D 4 HOH 269 592 283 HOH HOH A . D 4 HOH 270 593 284 HOH HOH A . D 4 HOH 271 594 285 HOH HOH A . D 4 HOH 272 595 286 HOH HOH A . D 4 HOH 273 596 287 HOH HOH A . #