HEADER UNKNOWN FUNCTION 21-NOV-11 3UR3 TITLE STRUCTURE OF THE CMR2 SUBUNIT OF THE CRISPR RNA SILENCING COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: CMR2DHD; COMPND 3 CHAIN: C; COMPND 4 FRAGMENT: UNP RESIDUES 215-871; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS; SOURCE 3 ORGANISM_TAXID: 186497; SOURCE 4 STRAIN: ATCC 43587 / DSM 3638 / JCM 8422 / VC1; SOURCE 5 GENE: PF1129; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET200D KEYWDS FERREDOXIN FOLD, NUCLEOTIDE-BINDING, POLYMERASE, CMR COMPLEX, UNKNOWN KEYWDS 2 FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR A.I.COCOZAKI,N.F.RAMIA,Y.SHAO,C.R.HALE,R.M.TERNS,M.P.TERNS,H.LI REVDAT 3 28-FEB-24 3UR3 1 REMARK SEQADV LINK REVDAT 2 04-FEB-15 3UR3 1 HETATM REVDAT 1 21-MAR-12 3UR3 0 JRNL AUTH A.I.COCOZAKI,N.F.RAMIA,Y.SHAO,C.R.HALE,R.M.TERNS,M.P.TERNS, JRNL AUTH 2 H.LI JRNL TITL STRUCTURE OF THE CMR2 SUBUNIT OF THE CRISPR-CAS RNA JRNL TITL 2 SILENCING COMPLEX. JRNL REF STRUCTURE V. 20 545 2012 JRNL REFN ISSN 0969-2126 JRNL PMID 22405013 JRNL DOI 10.1016/J.STR.2012.01.018 REMARK 2 REMARK 2 RESOLUTION. 2.41 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7_650) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.41 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.68 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 83.9 REMARK 3 NUMBER OF REFLECTIONS : 27304 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.850 REMARK 3 FREE R VALUE TEST SET COUNT : 1871 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.6882 - 5.6503 0.99 2485 183 0.2317 0.2670 REMARK 3 2 5.6503 - 4.4864 1.00 2368 174 0.1857 0.2515 REMARK 3 3 4.4864 - 3.9197 0.99 2333 173 0.1769 0.2462 REMARK 3 4 3.9197 - 3.5615 0.98 2300 166 0.1976 0.2584 REMARK 3 5 3.5615 - 3.3063 0.97 2263 164 0.2263 0.2766 REMARK 3 6 3.3063 - 3.1115 0.95 2190 158 0.2535 0.3386 REMARK 3 7 3.1115 - 2.9557 0.89 2047 158 0.2574 0.2883 REMARK 3 8 2.9557 - 2.8270 0.82 1897 141 0.2663 0.3448 REMARK 3 9 2.8270 - 2.7182 0.76 1757 130 0.2610 0.2892 REMARK 3 10 2.7182 - 2.6244 0.72 1669 123 0.2554 0.2943 REMARK 3 11 2.6244 - 2.5424 0.67 1536 111 0.2497 0.2933 REMARK 3 12 2.5424 - 2.4697 0.62 1411 105 0.2624 0.3265 REMARK 3 13 2.4697 - 2.4050 0.51 1177 85 0.2853 0.3618 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.61 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 77.66 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.360 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 27.23150 REMARK 3 B22 (A**2) : -17.17460 REMARK 3 B33 (A**2) : -10.05690 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 4792 REMARK 3 ANGLE : 1.068 6153 REMARK 3 CHIRALITY : 0.071 688 REMARK 3 PLANARITY : 0.004 763 REMARK 3 DIHEDRAL : 18.862 1721 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -7.5735 15.5474 -13.0182 REMARK 3 T TENSOR REMARK 3 T11: -0.0137 T22: -0.0185 REMARK 3 T33: -0.2254 T12: -0.0803 REMARK 3 T13: 0.1539 T23: -0.0084 REMARK 3 L TENSOR REMARK 3 L11: 1.3306 L22: 1.7096 REMARK 3 L33: 0.5860 L12: -0.1692 REMARK 3 L13: -0.1034 L23: -0.2791 REMARK 3 S TENSOR REMARK 3 S11: 0.0785 S12: -0.0007 S13: -0.1867 REMARK 3 S21: -0.4103 S22: -0.1125 S23: 0.8888 REMARK 3 S31: 0.0497 S32: -0.0502 S33: -0.2649 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3UR3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-NOV-11. REMARK 100 THE DEPOSITION ID IS D_1000069103. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97921 REMARK 200 MONOCHROMATOR : SI220 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29299 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 65.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M CACL2, 28% PEG 400, 0.1M HEPES REMARK 280 SODIUM, PH 7.4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 303.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.31750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.96700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.10550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 71.96700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.31750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.10550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET C 179 REMARK 465 ARG C 180 REMARK 465 GLY C 181 REMARK 465 SER C 182 REMARK 465 HIS C 183 REMARK 465 HIS C 184 REMARK 465 HIS C 185 REMARK 465 HIS C 186 REMARK 465 HIS C 187 REMARK 465 HIS C 188 REMARK 465 GLY C 189 REMARK 465 MET C 190 REMARK 465 ALA C 191 REMARK 465 SER C 192 REMARK 465 MET C 193 REMARK 465 THR C 194 REMARK 465 GLY C 195 REMARK 465 GLY C 196 REMARK 465 GLN C 197 REMARK 465 GLN C 198 REMARK 465 MET C 199 REMARK 465 GLY C 200 REMARK 465 ARG C 201 REMARK 465 ASP C 202 REMARK 465 LEU C 203 REMARK 465 TYR C 204 REMARK 465 ASP C 205 REMARK 465 ASP C 206 REMARK 465 ASP C 207 REMARK 465 ASP C 208 REMARK 465 LYS C 209 REMARK 465 ASP C 210 REMARK 465 HIS C 211 REMARK 465 PRO C 212 REMARK 465 PHE C 213 REMARK 465 THR C 214 REMARK 465 SER C 215 REMARK 465 SER C 376 REMARK 465 GLU C 377 REMARK 465 LYS C 378 REMARK 465 GLU C 379 REMARK 465 ASP C 380 REMARK 465 ILE C 381 REMARK 465 TYR C 382 REMARK 465 GLN C 383 REMARK 465 VAL C 384 REMARK 465 THR C 385 REMARK 465 GLU C 386 REMARK 465 ASN C 387 REMARK 465 ALA C 388 REMARK 465 GLY C 389 REMARK 465 LEU C 390 REMARK 465 SER C 391 REMARK 465 ASP C 392 REMARK 465 GLU C 393 REMARK 465 ASP C 394 REMARK 465 VAL C 395 REMARK 465 LYS C 396 REMARK 465 LYS C 397 REMARK 465 TRP C 398 REMARK 465 LEU C 399 REMARK 465 LYS C 400 REMARK 465 PHE C 401 REMARK 465 ALA C 402 REMARK 465 GLU C 403 REMARK 465 LYS C 404 REMARK 465 LYS C 405 REMARK 465 GLU C 406 REMARK 465 ASN C 407 REMARK 465 SER C 408 REMARK 465 ARG C 409 REMARK 465 VAL C 410 REMARK 465 LEU C 411 REMARK 465 GLU C 412 REMARK 465 ARG C 413 REMARK 465 ILE C 414 REMARK 465 ARG C 436 REMARK 465 PHE C 437 REMARK 465 GLU C 438 REMARK 465 LYS C 439 REMARK 465 SER C 440 REMARK 465 GLU C 441 REMARK 465 GLN C 442 REMARK 465 LEU C 443 REMARK 465 LYS C 444 REMARK 465 SER C 559 REMARK 465 LYS C 560 REMARK 465 LYS C 561 REMARK 465 LEU C 562 REMARK 465 LYS C 563 REMARK 465 ASN C 564 REMARK 465 LYS C 565 REMARK 465 LYS C 566 REMARK 465 GLU C 567 REMARK 465 ILE C 568 REMARK 465 LYS C 606 REMARK 465 VAL C 607 REMARK 465 ILE C 608 REMARK 465 SER C 609 REMARK 465 GLY C 610 REMARK 465 GLU C 611 REMARK 465 VAL C 612 REMARK 465 LEU C 613 REMARK 465 GLY C 614 REMARK 465 GLU C 615 REMARK 465 ILE C 616 REMARK 465 SER C 617 REMARK 465 THR C 618 REMARK 465 ARG C 619 REMARK 465 ILE C 620 REMARK 465 HIS C 621 REMARK 465 PRO C 622 REMARK 465 ASN C 623 REMARK 465 ILE C 624 REMARK 465 ARG C 625 REMARK 465 ASP C 626 REMARK 465 TYR C 627 REMARK 465 VAL C 628 REMARK 465 GLU C 629 REMARK 465 ILE C 630 REMARK 465 PRO C 631 REMARK 465 GLU C 632 REMARK 465 ALA C 633 REMARK 465 LYS C 634 REMARK 465 TYR C 635 REMARK 465 TYR C 636 REMARK 465 SER C 637 REMARK 465 PHE C 699 REMARK 465 GLU C 700 REMARK 465 ASN C 701 REMARK 465 GLY C 702 REMARK 465 SER C 703 REMARK 465 LEU C 704 REMARK 465 LEU C 705 REMARK 465 PRO C 706 REMARK 465 GLY C 707 REMARK 465 GLU C 783 REMARK 465 GLU C 784 REMARK 465 LYS C 785 REMARK 465 GLY C 786 REMARK 465 GLY C 787 REMARK 465 ARG C 820A REMARK 465 GLY C 820B REMARK 465 ARG C 820C REMARK 465 ASN C 820D REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO C 231 75.01 -68.76 REMARK 500 PHE C 264 -78.77 -119.15 REMARK 500 ILE C 416 -6.64 64.20 REMARK 500 VAL C 450 -69.32 -94.28 REMARK 500 ASP C 460 -72.34 -99.48 REMARK 500 LYS C 521 -61.48 -95.34 REMARK 500 SER C 556 -73.36 -104.17 REMARK 500 ARG C 655 -65.62 -94.07 REMARK 500 LYS C 737 -73.94 -116.75 REMARK 500 LYS C 744 -122.92 53.30 REMARK 500 ASP C 745 59.96 39.40 REMARK 500 PHE C 870 74.15 -119.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER C 556 GLY C 557 -146.43 REMARK 500 VAL C 788 GLY C 789 149.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 903 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 448 SG REMARK 620 2 CYS C 451 SG 95.9 REMARK 620 3 CYS C 478 SG 116.3 114.2 REMARK 620 4 CYS C 481 SG 110.4 109.8 109.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 901 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 600 OD1 REMARK 620 2 ASP C 600 OD2 43.0 REMARK 620 3 GLY C 601 O 86.8 77.0 REMARK 620 4 ASP C 673 OD1 100.7 58.2 66.5 REMARK 620 5 HOH C1029 O 83.8 94.3 170.3 112.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 902 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 600 OD2 REMARK 620 2 ASP C 673 OD2 61.1 REMARK 620 3 ASP C 674 OD1 72.9 86.8 REMARK 620 4 ASP C 674 OD2 94.9 63.4 45.2 REMARK 620 5 HOH C1029 O 98.9 113.1 152.2 161.3 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 903 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3UNG RELATED DB: PDB REMARK 900 THE SAME PROTEIN, NOT BOUND TO ADP DBREF 3UR3 C 215 871 UNP Q8U1S6 Q8U1S6_PYRFU 215 871 SEQADV 3UR3 MET C 179 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 ARG C 180 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 GLY C 181 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 SER C 182 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 HIS C 183 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 HIS C 184 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 HIS C 185 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 HIS C 186 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 HIS C 187 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 HIS C 188 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 GLY C 189 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 MET C 190 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 ALA C 191 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 SER C 192 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 MET C 193 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 THR C 194 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 GLY C 195 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 GLY C 196 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 GLN C 197 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 GLN C 198 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 MET C 199 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 GLY C 200 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 ARG C 201 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 ASP C 202 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 LEU C 203 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 TYR C 204 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 ASP C 205 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 ASP C 206 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 ASP C 207 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 ASP C 208 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 LYS C 209 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 ASP C 210 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 HIS C 211 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 PRO C 212 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 PHE C 213 UNP Q8U1S6 EXPRESSION TAG SEQADV 3UR3 THR C 214 UNP Q8U1S6 EXPRESSION TAG SEQRES 1 C 693 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 C 693 SER MET THR GLY GLY GLN GLN MET GLY ARG ASP LEU TYR SEQRES 3 C 693 ASP ASP ASP ASP LYS ASP HIS PRO PHE THR SER VAL LYS SEQRES 4 C 693 ASP PRO THR LEU LEU ARG ILE LYS ILE VAL PRO VAL GLN SEQRES 5 C 693 PRO PHE ILE ALA ASN SER ARG LYS GLN LEU ASP LEU TRP SEQRES 6 C 693 ALA SER SER HIS LEU LEU SER MET LEU MET TYR LYS ALA SEQRES 7 C 693 LEU GLU VAL ILE VAL ASP LYS PHE GLY PRO GLU HIS VAL SEQRES 8 C 693 ILE TYR PRO SER LEU ARG ASP GLN PRO PHE PHE LEU LYS SEQRES 9 C 693 PHE TYR LEU GLY GLU ASN ILE GLY ASP GLU ILE LEU VAL SEQRES 10 C 693 ALA ASN LEU PRO ASN LYS ALA LEU ALA ILE VAL SER GLY SEQRES 11 C 693 LYS GLU ALA GLU LYS ILE GLU GLU GLU ILE LYS LYS ARG SEQRES 12 C 693 ILE ARG ASP PHE LEU LEU GLN LEU TYR ARG GLU ALA VAL SEQRES 13 C 693 ASP TRP ALA VAL GLU ASN GLY VAL VAL LYS VAL ASP ARG SEQRES 14 C 693 SER GLU LYS ASP SER MET LEU LYS GLU ALA TYR LEU LYS SEQRES 15 C 693 ILE VAL ARG GLU TYR PHE THR VAL SER ILE THR TRP VAL SEQRES 16 C 693 SER LEU SER GLU LYS GLU ASP ILE TYR GLN VAL THR GLU SEQRES 17 C 693 ASN ALA GLY LEU SER ASP GLU ASP VAL LYS LYS TRP LEU SEQRES 18 C 693 LYS PHE ALA GLU LYS LYS GLU ASN SER ARG VAL LEU GLU SEQRES 19 C 693 ARG ILE ALA ILE TYR PRO LEU LEU VAL LYS ILE LEU ASP SEQRES 20 C 693 SER LEU GLY GLU ARG LYS VAL THR GLU GLU ARG PHE GLU SEQRES 21 C 693 LYS SER GLU GLN LEU LYS GLY TRP LYS CYS HIS VAL CYS SEQRES 22 C 693 GLY GLU ASN LEU ALA ILE PHE GLY ASP MET TYR ASP HIS SEQRES 23 C 693 ASP ASN LEU LYS SER LEU TRP LEU ASP GLU GLU PRO LEU SEQRES 24 C 693 CYS PRO MET CYS LEU ILE LYS ARG TYR TYR PRO VAL TRP SEQRES 25 C 693 ILE ARG SER LYS THR GLY GLN LYS ILE ARG PHE GLU SER SEQRES 26 C 693 VAL VAL ASP VAL ALA LEU LEU TYR LYS ASN TRP ARG LYS SEQRES 27 C 693 ILE PHE ASP GLU LYS TYR GLY LYS ASP LEU VAL SER LYS SEQRES 28 C 693 ALA ARG GLU VAL SER GLU ASP PHE VAL LYS ASP ASN MET SEQRES 29 C 693 LEU VAL ASP SER ASP LEU TYR TYR SER SER THR TRP GLU SEQRES 30 C 693 SER GLY LEU SER LYS LYS LEU LYS ASN LYS LYS GLU ILE SEQRES 31 C 693 ASP GLU GLU LYS VAL LYS GLU VAL VAL ASP PHE LEU ASN SEQRES 32 C 693 ALA ALA TYR LYS GLU ILE GLY ASN PRO PRO LYS TYR TYR SEQRES 33 C 693 ALA ILE LEU VAL MET ASP GLY ASP ASP MET GLY LYS VAL SEQRES 34 C 693 ILE SER GLY GLU VAL LEU GLY GLU ILE SER THR ARG ILE SEQRES 35 C 693 HIS PRO ASN ILE ARG ASP TYR VAL GLU ILE PRO GLU ALA SEQRES 36 C 693 LYS TYR TYR SER THR PRO GLN VAL HIS VAL ALA ILE SER SEQRES 37 C 693 GLN ALA LEU ALA ASN PHE SER ILE ARG GLU VAL ARG SER SEQRES 38 C 693 VAL VAL LYS ASP GLU GLY LEU LEU ILE TYR ALA GLY GLY SEQRES 39 C 693 ASP ASP VAL LEU ALA ILE LEU PRO VAL ASP LYS ALA LEU SEQRES 40 C 693 GLU VAL ALA TYR LYS ILE ARG LYS GLU PHE GLY LYS SER SEQRES 41 C 693 PHE GLU ASN GLY SER LEU LEU PRO GLY TRP LYS LEU SER SEQRES 42 C 693 ALA GLY ILE LEU ILE VAL HIS TYR LYS HIS PRO LEU TYR SEQRES 43 C 693 ASP ALA LEU GLU LYS ALA ARG ASP LEU LEU ASN ASN LYS SEQRES 44 C 693 ALA LYS ASN VAL PRO GLY LYS ASP THR LEU ALA ILE GLY SEQRES 45 C 693 LEU LEU LYS ARG SER GLY SER TYR TYR ILE SER LEU VAL SEQRES 46 C 693 GLY TRP GLU LEU ILE ARG VAL PHE TYR ASN SER GLU LEU SEQRES 47 C 693 ARG LYS LYS LEU LEU GLU GLU LYS GLY GLY VAL GLY LYS SEQRES 48 C 693 ARG PHE ILE TYR HIS VAL LEU ARG GLU VAL ASP THR TRP SEQRES 49 C 693 PRO LYS VAL GLY ILE ASP GLU MET LEU LYS PHE GLU VAL SEQRES 50 C 693 ILE ARG HIS ILE ARG GLY ARG ASN LYS GLU GLU THR LYS SEQRES 51 C 693 GLU LEU ARG GLU LYS ILE TYR GLY GLU ILE LYS ASP LEU SEQRES 52 C 693 LEU GLU HIS VAL ARG GLY ASN ASN GLU VAL GLU LYS VAL SEQRES 53 C 693 ARG GLY LEU PHE THR PHE LEU LYS ILE ILE THR ASP ALA SEQRES 54 C 693 GLU VAL PHE PRO HET CA C 901 1 HET CA C 902 1 HET ZN C 903 1 HETNAM CA CALCIUM ION HETNAM ZN ZINC ION FORMUL 2 CA 2(CA 2+) FORMUL 4 ZN ZN 2+ FORMUL 5 HOH *29(H2 O) HELIX 1 1 LYS C 238 PHE C 264 1 27 HELIX 2 2 GLY C 265 GLU C 267 5 3 HELIX 3 3 GLN C 277 TYR C 284 1 8 HELIX 4 4 ILE C 289 VAL C 295 5 7 HELIX 5 5 GLU C 310 ASN C 340 1 31 HELIX 6 6 ASP C 346 SER C 348 5 3 HELIX 7 7 GLU C 349 LEU C 354 1 6 HELIX 8 8 LYS C 355 TYR C 365 1 11 HELIX 9 9 ILE C 416 GLU C 434 1 19 HELIX 10 10 ASP C 463 SER C 469 1 7 HELIX 11 11 CYS C 478 THR C 495 1 18 HELIX 12 12 SER C 503 LEU C 509 1 7 HELIX 13 13 LEU C 510 LYS C 512 5 3 HELIX 14 14 ASN C 513 SER C 534 1 22 HELIX 15 15 ASP C 545 TYR C 549 5 5 HELIX 16 16 TYR C 550 SER C 556 1 7 HELIX 17 17 GLU C 570 GLY C 588 1 19 HELIX 18 18 PRO C 639 ARG C 655 1 17 HELIX 19 19 ARG C 655 LYS C 662 1 8 HELIX 20 20 LYS C 683 SER C 698 1 16 HELIX 21 21 PRO C 722 LYS C 737 1 16 HELIX 22 22 ALA C 738 VAL C 741 5 4 HELIX 23 23 TRP C 765 ASN C 773 1 9 HELIX 24 24 SER C 774 LEU C 780 1 7 HELIX 25 25 LYS C 790 VAL C 800 1 11 HELIX 26 26 GLY C 807 ILE C 820 1 14 HELIX 27 27 GLU C 826 HIS C 844 1 19 HELIX 28 28 ASN C 849 ASP C 866 1 18 SHEET 1 A 4 VAL C 269 TYR C 271 0 SHEET 2 A 4 LYS C 301 SER C 307 -1 O LEU C 303 N TYR C 271 SHEET 3 A 4 PRO C 219 PRO C 228 -1 N THR C 220 O VAL C 306 SHEET 4 A 4 PHE C 366 SER C 374 -1 O THR C 371 N ARG C 223 SHEET 1 B 2 VAL C 538 LYS C 539 0 SHEET 2 B 2 MET C 542 LEU C 543 -1 O MET C 542 N LYS C 539 SHEET 1 C 6 LEU C 666 GLY C 671 0 SHEET 2 C 6 ASP C 674 PRO C 680 -1 O ASP C 674 N GLY C 671 SHEET 3 C 6 TYR C 593 GLY C 601 -1 N ALA C 595 O LEU C 679 SHEET 4 C 6 LEU C 710 HIS C 718 -1 O VAL C 717 N TYR C 594 SHEET 5 C 6 THR C 746 LEU C 752 1 O GLY C 750 N ILE C 716 SHEET 6 C 6 TYR C 758 GLY C 764 -1 O SER C 761 N ILE C 749 LINK SG CYS C 448 ZN ZN C 903 1555 1555 2.42 LINK SG CYS C 451 ZN ZN C 903 1555 1555 2.42 LINK SG CYS C 478 ZN ZN C 903 1555 1555 2.29 LINK SG CYS C 481 ZN ZN C 903 1555 1555 2.39 LINK OD1 ASP C 600 CA CA C 901 1555 1555 2.92 LINK OD2 ASP C 600 CA CA C 901 1555 1555 3.07 LINK OD2 ASP C 600 CA CA C 902 1555 1555 2.94 LINK O GLY C 601 CA CA C 901 1555 1555 2.79 LINK OD1 ASP C 673 CA CA C 901 1555 1555 2.78 LINK OD2 ASP C 673 CA CA C 902 1555 1555 2.70 LINK OD1 ASP C 674 CA CA C 902 1555 1555 2.80 LINK OD2 ASP C 674 CA CA C 902 1555 1555 2.94 LINK CA CA C 901 O HOH C1029 1555 1555 2.96 LINK CA CA C 902 O HOH C1029 1555 1555 2.88 CISPEP 1 TYR C 271 PRO C 272 0 -2.88 CISPEP 2 LYS C 662 ASP C 663 0 -0.59 SITE 1 AC1 5 ASP C 600 GLY C 601 MET C 604 ASP C 673 SITE 2 AC1 5 HOH C1029 SITE 1 AC2 4 ASP C 600 ASP C 673 ASP C 674 HOH C1029 SITE 1 AC3 5 CYS C 448 CYS C 451 ASN C 454 CYS C 478 SITE 2 AC3 5 CYS C 481 CRYST1 70.635 80.211 143.934 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014157 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012467 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006948 0.00000