HEADER TRANSCRIPTION/INHIBITOR 21-NOV-11 3UR4 TITLE CRYSTAL STRUCTURE OF HUMAN WD REPEAT DOMAIN 5 WITH COMPOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: WD REPEAT-CONTAINING PROTEIN 5; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BMP2-INDUCED 3-KB GENE PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: WDR5, BIG3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) V2RPRARE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28-MHL KEYWDS STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, KEYWDS 2 TRANSCRIPTION, WD REPEAT DOMAIN 5, WDR5, TRANSCRIPTION-INHIBITOR KEYWDS 3 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.DONG,L.DOMBROVSKI,G.SENISTERRA,A.WERNIMONT,G.A.WASNEY,A.ALLALI AUTHOR 2 HASSANI,K.T.NGUYEN,D.SMIL,Y.BOLSHAN,T.HAJIAN,G.PODA,I.CHAU,R.AL- AUTHOR 3 AWAR,C.BOUNTRA,J.WEIGELT,A.M.EDWARDS,C.H.ARROWSMITH,P.BROWN, AUTHOR 4 M.SCHAPIRA,M.VEDADI,H.WU,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 4 13-SEP-23 3UR4 1 REMARK SEQADV REVDAT 3 16-MAY-18 3UR4 1 JRNL REVDAT 2 08-NOV-17 3UR4 1 REMARK REVDAT 1 14-DEC-11 3UR4 0 JRNL AUTH G.SENISTERRA,H.WU,A.ALLALI-HASSANI,G.A.WASNEY, JRNL AUTH 2 D.BARSYTE-LOVEJOY,L.DOMBROVSKI,A.DONG,K.T.NGUYEN,D.SMIL, JRNL AUTH 3 Y.BOLSHAN,T.HAJIAN,H.HE,A.SEITOVA,I.CHAU,F.LI,G.PODA, JRNL AUTH 4 J.F.COUTURE,P.J.BROWN,R.AL-AWAR,M.SCHAPIRA,C.H.ARROWSMITH, JRNL AUTH 5 M.VEDADI JRNL TITL SMALL-MOLECULE INHIBITION OF MLL ACTIVITY BY DISRUPTION OF JRNL TITL 2 ITS INTERACTION WITH WDR5. JRNL REF BIOCHEM. J. V. 449 151 2013 JRNL REFN ESSN 1470-8728 JRNL PMID 22989411 JRNL DOI 10.1042/BJ20121280 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 56017 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1176 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3368 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.38 REMARK 3 BIN R VALUE (WORKING SET) : 0.2790 REMARK 3 BIN FREE R VALUE SET COUNT : 73 REMARK 3 BIN FREE R VALUE : 0.3080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4642 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 138 REMARK 3 SOLVENT ATOMS : 717 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.36000 REMARK 3 B22 (A**2) : 0.22000 REMARK 3 B33 (A**2) : -0.14000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.36000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.135 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.123 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.085 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.685 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4975 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6768 ; 1.109 ; 1.953 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 630 ; 6.815 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 186 ;31.981 ;25.054 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 816 ;12.954 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;16.595 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 754 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3702 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3086 ; 0.360 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5005 ; 0.668 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1889 ; 0.991 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1763 ; 1.657 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3UR4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-NOV-11. REMARK 100 THE DEPOSITION ID IS D_1000069104. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : VARIMAX HF REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN A200 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57305 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : 0.04200 REMARK 200 FOR THE DATA SET : 22.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.16500 REMARK 200 R SYM FOR SHELL (I) : 0.16500 REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3SMR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG 3350,0.1M A.S. ,0.1M BIS TRIS REMARK 280 PH 6.0 , VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 67.41450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.50100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 67.41450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 23.50100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 23 REMARK 465 THR A 24 REMARK 465 GLN A 25 REMARK 465 SER A 26 REMARK 465 LYS A 27 REMARK 465 PRO A 28 REMARK 465 THR A 29 REMARK 465 PRO A 30 REMARK 465 ASP A 212 REMARK 465 GLY B 23 REMARK 465 THR B 24 REMARK 465 GLN B 25 REMARK 465 SER B 26 REMARK 465 LYS B 27 REMARK 465 PRO B 28 REMARK 465 THR B 29 REMARK 465 PRO B 30 REMARK 465 ASP B 211 REMARK 465 ASP B 212 REMARK 465 ASP B 213 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 32 CE NZ REMARK 470 LYS A 87 CE NZ REMARK 470 LYS A 159 CD CE NZ REMARK 470 LYS A 162 CD CE NZ REMARK 470 LYS A 245 CE NZ REMARK 470 LYS A 247 CG CD CE NZ REMARK 470 LYS B 32 CE NZ REMARK 470 LYS B 78 CE NZ REMARK 470 LYS B 87 CE NZ REMARK 470 LYS B 120 CE NZ REMARK 470 LYS B 159 CD CE NZ REMARK 470 LYS B 207 CE NZ REMARK 470 LYS B 227 NZ REMARK 470 LYS B 239 CE NZ REMARK 470 SER B 244 OG REMARK 470 LYS B 245 CD CE NZ REMARK 470 LYS B 247 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 151 5.92 81.55 REMARK 500 LEU A 234 37.58 -83.10 REMARK 500 ASN A 257 89.64 -154.69 REMARK 500 LYS A 259 -43.03 -130.58 REMARK 500 THR A 312 -32.22 -132.75 REMARK 500 THR A 312 -31.12 -132.75 REMARK 500 ASP B 150 1.51 -68.86 REMARK 500 LEU B 234 46.57 -77.39 REMARK 500 ASN B 257 89.81 -152.54 REMARK 500 ASP B 324 -65.93 -140.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 0BW A 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 2006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 3000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 3002 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 0BW B 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2008 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2009 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2010 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 2014 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 335 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 3001 DBREF 3UR4 A 24 334 UNP P61964 WDR5_HUMAN 24 334 DBREF 3UR4 B 24 334 UNP P61964 WDR5_HUMAN 24 334 SEQADV 3UR4 GLY A 23 UNP P61964 EXPRESSION TAG SEQADV 3UR4 GLY B 23 UNP P61964 EXPRESSION TAG SEQRES 1 A 312 GLY THR GLN SER LYS PRO THR PRO VAL LYS PRO ASN TYR SEQRES 2 A 312 ALA LEU LYS PHE THR LEU ALA GLY HIS THR LYS ALA VAL SEQRES 3 A 312 SER SER VAL LYS PHE SER PRO ASN GLY GLU TRP LEU ALA SEQRES 4 A 312 SER SER SER ALA ASP LYS LEU ILE LYS ILE TRP GLY ALA SEQRES 5 A 312 TYR ASP GLY LYS PHE GLU LYS THR ILE SER GLY HIS LYS SEQRES 6 A 312 LEU GLY ILE SER ASP VAL ALA TRP SER SER ASP SER ASN SEQRES 7 A 312 LEU LEU VAL SER ALA SER ASP ASP LYS THR LEU LYS ILE SEQRES 8 A 312 TRP ASP VAL SER SER GLY LYS CYS LEU LYS THR LEU LYS SEQRES 9 A 312 GLY HIS SER ASN TYR VAL PHE CYS CYS ASN PHE ASN PRO SEQRES 10 A 312 GLN SER ASN LEU ILE VAL SER GLY SER PHE ASP GLU SER SEQRES 11 A 312 VAL ARG ILE TRP ASP VAL LYS THR GLY LYS CYS LEU LYS SEQRES 12 A 312 THR LEU PRO ALA HIS SER ASP PRO VAL SER ALA VAL HIS SEQRES 13 A 312 PHE ASN ARG ASP GLY SER LEU ILE VAL SER SER SER TYR SEQRES 14 A 312 ASP GLY LEU CYS ARG ILE TRP ASP THR ALA SER GLY GLN SEQRES 15 A 312 CYS LEU LYS THR LEU ILE ASP ASP ASP ASN PRO PRO VAL SEQRES 16 A 312 SER PHE VAL LYS PHE SER PRO ASN GLY LYS TYR ILE LEU SEQRES 17 A 312 ALA ALA THR LEU ASP ASN THR LEU LYS LEU TRP ASP TYR SEQRES 18 A 312 SER LYS GLY LYS CYS LEU LYS THR TYR THR GLY HIS LYS SEQRES 19 A 312 ASN GLU LYS TYR CYS ILE PHE ALA ASN PHE SER VAL THR SEQRES 20 A 312 GLY GLY LYS TRP ILE VAL SER GLY SER GLU ASP ASN LEU SEQRES 21 A 312 VAL TYR ILE TRP ASN LEU GLN THR LYS GLU ILE VAL GLN SEQRES 22 A 312 LYS LEU GLN GLY HIS THR ASP VAL VAL ILE SER THR ALA SEQRES 23 A 312 CYS HIS PRO THR GLU ASN ILE ILE ALA SER ALA ALA LEU SEQRES 24 A 312 GLU ASN ASP LYS THR ILE LYS LEU TRP LYS SER ASP CYS SEQRES 1 B 312 GLY THR GLN SER LYS PRO THR PRO VAL LYS PRO ASN TYR SEQRES 2 B 312 ALA LEU LYS PHE THR LEU ALA GLY HIS THR LYS ALA VAL SEQRES 3 B 312 SER SER VAL LYS PHE SER PRO ASN GLY GLU TRP LEU ALA SEQRES 4 B 312 SER SER SER ALA ASP LYS LEU ILE LYS ILE TRP GLY ALA SEQRES 5 B 312 TYR ASP GLY LYS PHE GLU LYS THR ILE SER GLY HIS LYS SEQRES 6 B 312 LEU GLY ILE SER ASP VAL ALA TRP SER SER ASP SER ASN SEQRES 7 B 312 LEU LEU VAL SER ALA SER ASP ASP LYS THR LEU LYS ILE SEQRES 8 B 312 TRP ASP VAL SER SER GLY LYS CYS LEU LYS THR LEU LYS SEQRES 9 B 312 GLY HIS SER ASN TYR VAL PHE CYS CYS ASN PHE ASN PRO SEQRES 10 B 312 GLN SER ASN LEU ILE VAL SER GLY SER PHE ASP GLU SER SEQRES 11 B 312 VAL ARG ILE TRP ASP VAL LYS THR GLY LYS CYS LEU LYS SEQRES 12 B 312 THR LEU PRO ALA HIS SER ASP PRO VAL SER ALA VAL HIS SEQRES 13 B 312 PHE ASN ARG ASP GLY SER LEU ILE VAL SER SER SER TYR SEQRES 14 B 312 ASP GLY LEU CYS ARG ILE TRP ASP THR ALA SER GLY GLN SEQRES 15 B 312 CYS LEU LYS THR LEU ILE ASP ASP ASP ASN PRO PRO VAL SEQRES 16 B 312 SER PHE VAL LYS PHE SER PRO ASN GLY LYS TYR ILE LEU SEQRES 17 B 312 ALA ALA THR LEU ASP ASN THR LEU LYS LEU TRP ASP TYR SEQRES 18 B 312 SER LYS GLY LYS CYS LEU LYS THR TYR THR GLY HIS LYS SEQRES 19 B 312 ASN GLU LYS TYR CYS ILE PHE ALA ASN PHE SER VAL THR SEQRES 20 B 312 GLY GLY LYS TRP ILE VAL SER GLY SER GLU ASP ASN LEU SEQRES 21 B 312 VAL TYR ILE TRP ASN LEU GLN THR LYS GLU ILE VAL GLN SEQRES 22 B 312 LYS LEU GLN GLY HIS THR ASP VAL VAL ILE SER THR ALA SEQRES 23 B 312 CYS HIS PRO THR GLU ASN ILE ILE ALA SER ALA ALA LEU SEQRES 24 B 312 GLU ASN ASP LYS THR ILE LYS LEU TRP LYS SER ASP CYS HET 0BW A1000 28 HET EDO A2000 4 HET EDO A2006 4 HET CL A1001 1 HET CL A1002 1 HET CL A1003 1 HET CL A1005 1 HET SO4 A3000 5 HET SO4 A3002 5 HET UNX A 335 1 HET UNX A 336 1 HET UNX A 337 1 HET UNX A 338 1 HET UNX A1006 1 HET UNX A1008 1 HET UNX A1009 1 HET UNX A1011 1 HET UNX A1016 1 HET UNX A1019 1 HET UNX A1020 1 HET UNX A1022 1 HET UNX A1023 1 HET UNX A1025 1 HET UNX A1026 1 HET UNX A1028 1 HET UNX A1030 1 HET 0BW B1000 28 HET EDO B2001 4 HET EDO B2002 4 HET EDO B2008 4 HET EDO B2009 4 HET EDO B2010 4 HET EDO B2014 4 HET CL B 335 1 HET CL B1004 1 HET SO4 B3001 5 HET UNX B 336 1 HET UNX B1007 1 HET UNX B1012 1 HET UNX B1013 1 HET UNX B1014 1 HET UNX B1015 1 HET UNX B1017 1 HET UNX B1018 1 HET UNX B1021 1 HET UNX B1024 1 HET UNX B1027 1 HET UNX B1029 1 HETNAM 0BW METHYL 3-[(3-METHOXYBENZOYL)AMINO]-4-(4- HETNAM 2 0BW METHYLPIPERAZIN-1-YL)BENZOATE HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION HETNAM UNX UNKNOWN ATOM OR ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 0BW 2(C21 H25 N3 O4) FORMUL 4 EDO 8(C2 H6 O2) FORMUL 6 CL 6(CL 1-) FORMUL 10 SO4 3(O4 S 2-) FORMUL 12 UNX 29(X) FORMUL 51 HOH *717(H2 O) SHEET 1 A 4 ALA A 36 LEU A 41 0 SHEET 2 A 4 ILE A 327 LYS A 331 -1 O ILE A 327 N LEU A 41 SHEET 3 A 4 ILE A 315 ALA A 320 -1 N ILE A 316 O TRP A 330 SHEET 4 A 4 VAL A 304 CYS A 309 -1 N ALA A 308 O ALA A 317 SHEET 1 B 4 VAL A 48 PHE A 53 0 SHEET 2 B 4 TRP A 59 SER A 64 -1 O ALA A 61 N LYS A 52 SHEET 3 B 4 ILE A 69 GLY A 73 -1 O TRP A 72 N LEU A 60 SHEET 4 B 4 PHE A 79 ILE A 83 -1 O ILE A 83 N ILE A 69 SHEET 1 C 4 ILE A 90 TRP A 95 0 SHEET 2 C 4 LEU A 101 SER A 106 -1 O ALA A 105 N SER A 91 SHEET 3 C 4 THR A 110 ASP A 115 -1 O TRP A 114 N LEU A 102 SHEET 4 C 4 CYS A 121 LYS A 126 -1 O LEU A 125 N LEU A 111 SHEET 1 D 4 VAL A 132 PHE A 137 0 SHEET 2 D 4 LEU A 143 SER A 148 -1 O VAL A 145 N ASN A 136 SHEET 3 D 4 VAL A 153 ASP A 157 -1 O TRP A 156 N ILE A 144 SHEET 4 D 4 CYS A 163 LEU A 167 -1 O LEU A 167 N VAL A 153 SHEET 1 E 4 VAL A 174 PHE A 179 0 SHEET 2 E 4 LEU A 185 SER A 190 -1 O VAL A 187 N HIS A 178 SHEET 3 E 4 CYS A 195 ASP A 199 -1 O TRP A 198 N ILE A 186 SHEET 4 E 4 CYS A 205 THR A 208 -1 O LEU A 206 N ILE A 197 SHEET 1 F 4 VAL A 217 PHE A 222 0 SHEET 2 F 4 TYR A 228 THR A 233 -1 O LEU A 230 N LYS A 221 SHEET 3 F 4 THR A 237 ASP A 242 -1 O TRP A 241 N ILE A 229 SHEET 4 F 4 LYS A 247 TYR A 252 -1 O LEU A 249 N LEU A 240 SHEET 1 G 4 ALA A 264 SER A 267 0 SHEET 2 G 4 TRP A 273 SER A 276 -1 O VAL A 275 N ASN A 265 SHEET 3 G 4 VAL A 283 ASN A 287 -1 O TYR A 284 N SER A 276 SHEET 4 G 4 ILE A 293 LEU A 297 -1 O VAL A 294 N ILE A 285 SHEET 1 H 4 ALA B 36 LEU B 41 0 SHEET 2 H 4 ILE B 327 LYS B 331 -1 O ILE B 327 N LEU B 41 SHEET 3 H 4 ILE B 315 ALA B 320 -1 N SER B 318 O LYS B 328 SHEET 4 H 4 VAL B 304 CYS B 309 -1 N ALA B 308 O ALA B 317 SHEET 1 I 4 VAL B 48 PHE B 53 0 SHEET 2 I 4 TRP B 59 SER B 64 -1 O ALA B 61 N LYS B 52 SHEET 3 I 4 ILE B 69 GLY B 73 -1 O TRP B 72 N LEU B 60 SHEET 4 I 4 PHE B 79 ILE B 83 -1 O ILE B 83 N ILE B 69 SHEET 1 J 4 ILE B 90 TRP B 95 0 SHEET 2 J 4 LEU B 101 SER B 106 -1 O ALA B 105 N SER B 91 SHEET 3 J 4 LEU B 111 ASP B 115 -1 O TRP B 114 N LEU B 102 SHEET 4 J 4 CYS B 121 LEU B 125 -1 O LEU B 125 N LEU B 111 SHEET 1 K 4 VAL B 132 PHE B 137 0 SHEET 2 K 4 LEU B 143 SER B 148 -1 O VAL B 145 N ASN B 136 SHEET 3 K 4 VAL B 153 ASP B 157 -1 O TRP B 156 N ILE B 144 SHEET 4 K 4 CYS B 163 LEU B 167 -1 O LEU B 167 N VAL B 153 SHEET 1 L 4 VAL B 174 PHE B 179 0 SHEET 2 L 4 LEU B 185 SER B 190 -1 O VAL B 187 N HIS B 178 SHEET 3 L 4 CYS B 195 ASP B 199 -1 O TRP B 198 N ILE B 186 SHEET 4 L 4 CYS B 205 LEU B 209 -1 O LEU B 206 N ILE B 197 SHEET 1 M 4 VAL B 217 PHE B 222 0 SHEET 2 M 4 TYR B 228 THR B 233 -1 O LEU B 230 N LYS B 221 SHEET 3 M 4 THR B 237 ASP B 242 -1 O TRP B 241 N ILE B 229 SHEET 4 M 4 LYS B 247 TYR B 252 -1 O LYS B 247 N ASP B 242 SHEET 1 N 4 ALA B 264 SER B 267 0 SHEET 2 N 4 TRP B 273 SER B 276 -1 O VAL B 275 N ASN B 265 SHEET 3 N 4 VAL B 283 ASN B 287 -1 O TYR B 284 N SER B 276 SHEET 4 N 4 ILE B 293 LEU B 297 -1 O LEU B 297 N VAL B 283 SITE 1 AC1 14 SER A 49 SER A 50 ALA A 65 GLY A 89 SITE 2 AC1 14 ILE A 90 SER A 91 PHE A 133 SER A 175 SITE 3 AC1 14 TYR A 191 CYS A 261 ILE A 305 HOH A 408 SITE 4 AC1 14 HOH A 530 HOH A 537 SITE 1 AC2 5 TYR A 228 LYS A 250 GLN A 289 HOH A 647 SITE 2 AC2 5 HOH A 701 SITE 1 AC3 2 TYR A 191 HOH A 673 SITE 1 AC4 4 SER A 223 PRO A 224 ASN A 225 HOH A 700 SITE 1 AC5 5 LYS A 221 ASN A 265 CYS A 309 HOH A 368 SITE 2 AC5 5 HOH A 428 SITE 1 AC6 6 SER A 184 ASP A 199 THR A 200 ALA A 201 SITE 2 AC6 6 HOH A 626 HOH A 634 SITE 1 AC7 4 ASN A 180 GLY A 226 HOH A 407 HOH A 688 SITE 1 AC8 10 HOH A 21 LYS A 52 ASN A 136 LYS A 221 SITE 2 AC8 10 PHE A 263 HOH A 368 HOH A 414 HOH A 442 SITE 3 AC8 10 HOH A 499 HOH A 690 SITE 1 AC9 4 ARG A 181 LYS A 227 SER B 117 HOH B 699 SITE 1 BC1 16 SER B 49 SER B 50 ALA B 65 GLY B 89 SITE 2 BC1 16 ILE B 90 SER B 91 ASP B 92 PHE B 133 SITE 3 BC1 16 SER B 175 TYR B 191 CYS B 261 ILE B 305 SITE 4 BC1 16 HOH B 361 HOH B 373 HOH B 402 HOH B 535 SITE 1 BC2 4 ASP B 98 ASN B 100 LEU B 101 HOH B 418 SITE 1 BC3 4 TYR B 228 LYS B 250 GLN B 289 HOH B 469 SITE 1 BC4 1 LYS B 272 SITE 1 BC5 3 TYR B 191 LEU B 234 LYS B 259 SITE 1 BC6 3 LYS B 165 THR B 200 ALA B 201 SITE 1 BC7 3 TYR B 191 HOH B 494 HOH B 528 SITE 1 BC8 4 SER B 97 ASP B 98 SER B 141 HOH B 418 SITE 1 BC9 5 HOH B 22 LYS B 52 ASP B 92 CYS B 135 SITE 2 BC9 5 ASN B 136 SITE 1 CC1 8 LYS B 52 HIS B 178 LYS B 221 PHE B 263 SITE 2 CC1 8 HOH B 365 HOH B 382 HOH B 515 HOH B 517 CRYST1 134.829 47.002 112.904 90.00 117.90 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007417 0.000000 0.003927 0.00000 SCALE2 0.000000 0.021276 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010022 0.00000