HEADER MOTOR PROTEIN 24-NOV-11 3USY TITLE CRYSTAL STRUCTURE OF FLIG (RESIDUE 116-343) FROM H. PYLORI COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLAGELLAR MOTOR SWITCH PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 116-343; COMPND 5 SYNONYM: FLIG; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HELICOBACTER PYLORI; SOURCE 3 ORGANISM_TAXID: 210; SOURCE 4 STRAIN: 26695; SOURCE 5 GENE: HP_0352; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-6P-2 KEYWDS MOTOR SWITCH PROTEIN, FLAGELLAR MOTOR, MOTOR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.H.LAM,S.W.N.AU REVDAT 3 08-NOV-23 3USY 1 SEQADV REVDAT 2 26-JUN-13 3USY 1 JRNL REVDAT 1 14-DEC-11 3USY 0 SPRSDE 14-DEC-11 3USY 3PL4 JRNL AUTH K.H.LAM,W.S.IP,Y.W.LAM,S.O.CHAN,T.K.W.LING,S.W.N.AU JRNL TITL MULTIPLE CONFORMATIONS OF THE FLIG C-TERMINAL DOMAIN PROVIDE JRNL TITL 2 INSIGHT INTO FLAGELLAR MOTOR SWITCHING JRNL REF STRUCTURE V. 20 315 2012 JRNL REFN ISSN 0969-2126 JRNL PMID 22325779 JRNL DOI 10.1016/J.STR.2011.11.020 REMARK 2 REMARK 2 RESOLUTION. 2.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.2_869) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.580 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 19547 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.2017 - 5.1689 1.00 2697 141 0.1769 0.1979 REMARK 3 2 5.1689 - 4.1063 1.00 2671 146 0.1644 0.2113 REMARK 3 3 4.1063 - 3.5883 1.00 2669 143 0.1876 0.2192 REMARK 3 4 3.5883 - 3.2607 1.00 2635 129 0.2044 0.2542 REMARK 3 5 3.2607 - 3.0272 1.00 2651 137 0.2155 0.2752 REMARK 3 6 3.0272 - 2.8489 1.00 2641 145 0.2534 0.3512 REMARK 3 7 2.8489 - 2.7064 0.99 2584 158 0.2763 0.3374 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.86 REMARK 3 K_SOL : 0.32 REMARK 3 B_SOL : 29.63 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.850 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.010 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.54160 REMARK 3 B22 (A**2) : 1.36440 REMARK 3 B33 (A**2) : -0.82280 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.60120 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3572 REMARK 3 ANGLE : 1.084 4802 REMARK 3 CHIRALITY : 0.068 570 REMARK 3 PLANARITY : 0.004 612 REMARK 3 DIHEDRAL : 17.395 1378 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 110:199) REMARK 3 ORIGIN FOR THE GROUP (A): 55.7027 -48.1425 6.5043 REMARK 3 T TENSOR REMARK 3 T11: 0.2734 T22: 0.2805 REMARK 3 T33: 0.2365 T12: 0.0889 REMARK 3 T13: 0.0109 T23: 0.0464 REMARK 3 L TENSOR REMARK 3 L11: 4.2605 L22: 7.3036 REMARK 3 L33: 4.8937 L12: 3.3697 REMARK 3 L13: 1.1339 L23: 1.4300 REMARK 3 S TENSOR REMARK 3 S11: 0.2439 S12: -0.1059 S13: 0.0534 REMARK 3 S21: 0.3436 S22: -0.0673 S23: 0.0780 REMARK 3 S31: 0.3909 S32: -0.0250 S33: -0.1993 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 200:244) REMARK 3 ORIGIN FOR THE GROUP (A): 19.8855 -36.2142 -3.4457 REMARK 3 T TENSOR REMARK 3 T11: 0.3045 T22: 0.3626 REMARK 3 T33: 0.3334 T12: -0.0215 REMARK 3 T13: 0.0661 T23: -0.0423 REMARK 3 L TENSOR REMARK 3 L11: 6.1020 L22: 7.5048 REMARK 3 L33: 5.8678 L12: -1.9672 REMARK 3 L13: 1.5335 L23: -2.5763 REMARK 3 S TENSOR REMARK 3 S11: 0.0374 S12: -0.2839 S13: 0.5965 REMARK 3 S21: 0.1871 S22: 0.0101 S23: 0.3785 REMARK 3 S31: -0.5094 S32: -0.5525 S33: -0.0337 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 245:336) REMARK 3 ORIGIN FOR THE GROUP (A): 25.5813 -17.9507 11.3677 REMARK 3 T TENSOR REMARK 3 T11: 0.3101 T22: 0.2324 REMARK 3 T33: 0.2611 T12: -0.0075 REMARK 3 T13: 0.0328 T23: -0.0181 REMARK 3 L TENSOR REMARK 3 L11: 5.3825 L22: 4.1535 REMARK 3 L33: 4.6105 L12: -1.3856 REMARK 3 L13: 2.7434 L23: -0.1790 REMARK 3 S TENSOR REMARK 3 S11: 0.1280 S12: -0.0999 S13: -0.0151 REMARK 3 S21: 0.3756 S22: -0.0001 S23: -0.0992 REMARK 3 S31: 0.1421 S32: 0.0397 S33: -0.1185 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 110:197) REMARK 3 ORIGIN FOR THE GROUP (A): 78.8902 13.6391 35.6843 REMARK 3 T TENSOR REMARK 3 T11: 0.3155 T22: 0.2968 REMARK 3 T33: 0.3617 T12: -0.0211 REMARK 3 T13: -0.0416 T23: 0.0944 REMARK 3 L TENSOR REMARK 3 L11: 3.0266 L22: 6.0367 REMARK 3 L33: 3.6764 L12: -0.7193 REMARK 3 L13: -0.9942 L23: 0.5465 REMARK 3 S TENSOR REMARK 3 S11: 0.0258 S12: 0.0195 S13: -0.0058 REMARK 3 S21: -0.3577 S22: 0.1451 S23: 0.4912 REMARK 3 S31: -0.2623 S32: -0.2816 S33: -0.2224 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 198:279) REMARK 3 ORIGIN FOR THE GROUP (A): 47.7709 -7.2578 38.5641 REMARK 3 T TENSOR REMARK 3 T11: 0.3056 T22: 0.4221 REMARK 3 T33: 0.4723 T12: -0.0224 REMARK 3 T13: -0.0308 T23: -0.0671 REMARK 3 L TENSOR REMARK 3 L11: -0.8151 L22: 6.3549 REMARK 3 L33: 0.8799 L12: 1.0055 REMARK 3 L13: 0.0754 L23: 0.9827 REMARK 3 S TENSOR REMARK 3 S11: 0.1347 S12: -0.0644 S13: 0.1416 REMARK 3 S21: 0.4014 S22: -0.2291 S23: -0.0331 REMARK 3 S31: 0.0086 S32: -0.1653 S33: 0.0172 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 280:336) REMARK 3 ORIGIN FOR THE GROUP (A): 51.6564 -18.2815 28.5616 REMARK 3 T TENSOR REMARK 3 T11: 0.3791 T22: 0.3274 REMARK 3 T33: 0.4043 T12: -0.0114 REMARK 3 T13: -0.0745 T23: -0.1070 REMARK 3 L TENSOR REMARK 3 L11: 5.7740 L22: 5.9251 REMARK 3 L33: 4.5907 L12: 1.6172 REMARK 3 L13: -1.4118 L23: -0.1017 REMARK 3 S TENSOR REMARK 3 S11: 0.1055 S12: 0.0676 S13: 0.2725 REMARK 3 S21: -0.2056 S22: 0.0570 S23: -0.3916 REMARK 3 S31: -0.4588 S32: 0.3764 S33: -0.2298 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3USY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-DEC-11. REMARK 100 THE DEPOSITION ID IS D_1000069169. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-OCT-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19547 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 29.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1LKV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES, 10% PEG6000, 0.02M REMARK 280 SPERMIDINE, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 42.68900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.28200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 42.68900 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 51.28200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 85.37800 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -47.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 132.50142 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 83.20967 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 337 REMARK 465 GLU A 338 REMARK 465 GLU A 339 REMARK 465 ASP A 340 REMARK 465 VAL A 341 REMARK 465 ILE A 342 REMARK 465 GLU A 343 REMARK 465 GLY B 336 REMARK 465 GLU B 337 REMARK 465 GLU B 338 REMARK 465 GLU B 339 REMARK 465 ASP B 340 REMARK 465 VAL B 341 REMARK 465 ILE B 342 REMARK 465 GLU B 343 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN B 116 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR B 141 O HOH B 6 1.95 REMARK 500 OH TYR A 160 O HOH A 44 1.98 REMARK 500 O ALA A 210 O HOH A 4 2.11 REMARK 500 NZ LYS A 309 O HOH A 51 2.12 REMARK 500 OE1 GLN A 328 O HOH A 18 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 176 71.37 -64.79 REMARK 500 ASN B 175 64.96 -110.04 REMARK 500 GLU B 178 46.68 -154.00 REMARK 500 ASP B 234 81.45 -153.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 178 ILE A 179 -142.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3USW RELATED DB: PDB REMARK 900 FLIG FRAGMENT FROM RESIDUE 86-343 DBREF 3USY A 116 343 UNP O25119 O25119_HELPY 116 343 DBREF 3USY B 116 343 UNP O25119 O25119_HELPY 116 343 SEQADV 3USY GLY A 110 UNP O25119 EXPRESSION TAG SEQADV 3USY PRO A 111 UNP O25119 EXPRESSION TAG SEQADV 3USY LEU A 112 UNP O25119 EXPRESSION TAG SEQADV 3USY GLY A 113 UNP O25119 EXPRESSION TAG SEQADV 3USY SER A 114 UNP O25119 EXPRESSION TAG SEQADV 3USY MET A 115 UNP O25119 EXPRESSION TAG SEQADV 3USY GLY B 110 UNP O25119 EXPRESSION TAG SEQADV 3USY PRO B 111 UNP O25119 EXPRESSION TAG SEQADV 3USY LEU B 112 UNP O25119 EXPRESSION TAG SEQADV 3USY GLY B 113 UNP O25119 EXPRESSION TAG SEQADV 3USY SER B 114 UNP O25119 EXPRESSION TAG SEQADV 3USY MET B 115 UNP O25119 EXPRESSION TAG SEQRES 1 A 234 GLY PRO LEU GLY SER MET GLN LYS ASN PHE ALA TYR LEU SEQRES 2 A 234 GLY LYS ILE LYS PRO GLN GLN LEU ALA ASP PHE ILE ILE SEQRES 3 A 234 ASN GLU HIS PRO GLN THR ILE ALA LEU ILE LEU ALA HIS SEQRES 4 A 234 MET GLU ALA PRO ASN ALA ALA GLU THR LEU SER TYR PHE SEQRES 5 A 234 PRO ASP GLU MET LYS ALA GLU ILE SER ILE ARG MET ALA SEQRES 6 A 234 ASN LEU GLY GLU ILE SER PRO GLN VAL VAL LYS ARG VAL SEQRES 7 A 234 SER THR VAL LEU GLU ASN LYS LEU GLU SER LEU THR SER SEQRES 8 A 234 TYR LYS ILE GLU VAL GLY GLY LEU ARG ALA VAL ALA GLU SEQRES 9 A 234 ILE PHE ASN ARG LEU GLY GLN LYS SER ALA LYS THR THR SEQRES 10 A 234 LEU ALA ARG ILE GLU SER VAL ASP ASN LYS LEU ALA GLY SEQRES 11 A 234 ALA ILE LYS GLU MET MET PHE THR PHE GLU ASP ILE VAL SEQRES 12 A 234 LYS LEU ASP ASN PHE ALA ILE ARG GLU ILE LEU LYS VAL SEQRES 13 A 234 ALA ASP LYS LYS ASP LEU SER LEU ALA LEU LYS THR SER SEQRES 14 A 234 THR LYS ASP LEU THR ASP LYS PHE LEU ASN ASN MET SER SEQRES 15 A 234 SER ARG ALA ALA GLU GLN PHE VAL GLU GLU MET GLN TYR SEQRES 16 A 234 LEU GLY ALA VAL LYS ILE LYS ASP VAL ASP VAL ALA GLN SEQRES 17 A 234 ARG LYS ILE ILE GLU ILE VAL GLN SER LEU GLN GLU LYS SEQRES 18 A 234 GLY VAL ILE GLN THR GLY GLU GLU GLU ASP VAL ILE GLU SEQRES 1 B 234 GLY PRO LEU GLY SER MET GLN LYS ASN PHE ALA TYR LEU SEQRES 2 B 234 GLY LYS ILE LYS PRO GLN GLN LEU ALA ASP PHE ILE ILE SEQRES 3 B 234 ASN GLU HIS PRO GLN THR ILE ALA LEU ILE LEU ALA HIS SEQRES 4 B 234 MET GLU ALA PRO ASN ALA ALA GLU THR LEU SER TYR PHE SEQRES 5 B 234 PRO ASP GLU MET LYS ALA GLU ILE SER ILE ARG MET ALA SEQRES 6 B 234 ASN LEU GLY GLU ILE SER PRO GLN VAL VAL LYS ARG VAL SEQRES 7 B 234 SER THR VAL LEU GLU ASN LYS LEU GLU SER LEU THR SER SEQRES 8 B 234 TYR LYS ILE GLU VAL GLY GLY LEU ARG ALA VAL ALA GLU SEQRES 9 B 234 ILE PHE ASN ARG LEU GLY GLN LYS SER ALA LYS THR THR SEQRES 10 B 234 LEU ALA ARG ILE GLU SER VAL ASP ASN LYS LEU ALA GLY SEQRES 11 B 234 ALA ILE LYS GLU MET MET PHE THR PHE GLU ASP ILE VAL SEQRES 12 B 234 LYS LEU ASP ASN PHE ALA ILE ARG GLU ILE LEU LYS VAL SEQRES 13 B 234 ALA ASP LYS LYS ASP LEU SER LEU ALA LEU LYS THR SER SEQRES 14 B 234 THR LYS ASP LEU THR ASP LYS PHE LEU ASN ASN MET SER SEQRES 15 B 234 SER ARG ALA ALA GLU GLN PHE VAL GLU GLU MET GLN TYR SEQRES 16 B 234 LEU GLY ALA VAL LYS ILE LYS ASP VAL ASP VAL ALA GLN SEQRES 17 B 234 ARG LYS ILE ILE GLU ILE VAL GLN SER LEU GLN GLU LYS SEQRES 18 B 234 GLY VAL ILE GLN THR GLY GLU GLU GLU ASP VAL ILE GLU FORMUL 3 HOH *51(H2 O) HELIX 1 1 PHE A 119 ILE A 125 5 7 HELIX 2 2 LYS A 126 ILE A 135 1 10 HELIX 3 3 HIS A 138 HIS A 148 1 11 HELIX 4 4 GLU A 150 SER A 159 1 10 HELIX 5 5 PRO A 162 ASN A 175 1 14 HELIX 6 6 SER A 180 LEU A 195 1 16 HELIX 7 7 LEU A 195 SER A 200 1 6 HELIX 8 8 GLY A 207 LEU A 218 1 12 HELIX 9 9 GLY A 219 SER A 232 1 14 HELIX 10 10 ASP A 234 MET A 245 1 12 HELIX 11 11 THR A 247 LEU A 254 5 8 HELIX 12 12 ASP A 255 ALA A 266 1 12 HELIX 13 13 ASP A 267 LEU A 275 1 9 HELIX 14 14 LYS A 276 SER A 278 5 3 HELIX 15 15 THR A 279 ASN A 289 1 11 HELIX 16 16 SER A 291 GLY A 306 1 16 HELIX 17 17 LYS A 309 LYS A 330 1 22 HELIX 18 18 PHE B 119 ILE B 125 5 7 HELIX 19 19 LYS B 126 ILE B 135 1 10 HELIX 20 20 HIS B 138 HIS B 148 1 11 HELIX 21 21 GLU B 150 TYR B 160 1 11 HELIX 22 22 PRO B 162 ASN B 175 1 14 HELIX 23 23 SER B 180 LEU B 195 1 16 HELIX 24 24 GLU B 196 LEU B 198 5 3 HELIX 25 25 GLY B 207 LEU B 218 1 12 HELIX 26 26 GLY B 219 SER B 232 1 14 HELIX 27 27 ASP B 234 MET B 245 1 12 HELIX 28 28 THR B 247 VAL B 252 5 6 HELIX 29 29 ASP B 255 ALA B 266 1 12 HELIX 30 30 ASP B 267 LEU B 275 1 9 HELIX 31 31 THR B 279 ASN B 288 1 10 HELIX 32 32 SER B 291 TYR B 304 1 14 HELIX 33 33 LYS B 309 LYS B 330 1 22 CISPEP 1 GLY A 177 GLU A 178 0 -25.46 CRYST1 85.378 102.564 91.582 90.00 114.69 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011713 0.000000 0.005385 0.00000 SCALE2 0.000000 0.009750 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012018 0.00000