HEADER HORMONE RECEPTOR/HORMONE RECEPTOR 30-NOV-11 3UVV TITLE CRYSTAL STRUCTURE OF THE LIGAND BINDING DOMAINS OF THE THYROID TITLE 2 RECEPTOR:RETINOID X RECEPTOR COMPLEXED WITH 3,3',5 TRIIODO-L- TITLE 3 THYRONINE AND 9-CIS RETINOIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: THYROID HORMONE RECEPTOR ALPHA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: LIGAND BINDING DOMAIN (UNP RESIDUES 147-407); COMPND 5 SYNONYM: NUCLEAR RECEPTOR SUBFAMILY 1 GROUP A MEMBER 1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: RETINOIC ACID RECEPTOR RXR-ALPHA; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: LIGAND BINDING DOMAIN (UNP RESIDUES 225-462); COMPND 11 SYNONYM: NUCLEAR RECEPTOR SUBFAMILY 2 GROUP B MEMBER 1, RETINOID X COMPND 12 RECEPTOR ALPHA; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: BANTAM,CHICKENS; SOURCE 4 ORGANISM_TAXID: 9031; SOURCE 5 GENE: THRA, NR1A1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET 15B; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: RXRA, NR2B1; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PACYC184 KEYWDS TR-RXR HETERODIMER, ALLOSTERY, ALPHA HELICAL SANDWICH, KEYWDS 2 TRANSACTIVATION, HORMONE RECEPTOR-HORMONE RECEPTOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR E.J.FERNANDEZ,B.-D.K.PUTCHA,E.WRIGHT,J.S.BRUNZELLE REVDAT 5 15-NOV-23 3UVV 1 ATOM REVDAT 4 13-SEP-23 3UVV 1 REMARK SEQADV REVDAT 3 16-NOV-16 3UVV 1 FORMUL HET HETATM REMARK REVDAT 2 02-MAY-12 3UVV 1 JRNL REVDAT 1 18-APR-12 3UVV 0 JRNL AUTH B.D.PUTCHA,E.WRIGHT,J.S.BRUNZELLE,E.J.FERNANDEZ JRNL TITL STRUCTURAL BASIS FOR NEGATIVE COOPERATIVITY WITHIN JRNL TITL 2 AGONIST-BOUND TR:RXR HETERODIMERS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 109 6084 2012 JRNL REFN ISSN 0027-8424 JRNL PMID 22474364 JRNL DOI 10.1073/PNAS.1119852109 REMARK 2 REMARK 2 RESOLUTION. 2.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.8.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.55 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 19330 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 952 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.95 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.11 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2754 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2834 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2615 REMARK 3 BIN R VALUE (WORKING SET) : 0.2811 REMARK 3 BIN FREE R VALUE : 0.3272 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.05 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 139 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3691 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 45 REMARK 3 SOLVENT ATOMS : 19 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 108.6 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 114.3 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -57.08510 REMARK 3 B22 (A**2) : 20.64240 REMARK 3 B33 (A**2) : 36.44270 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.686 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.922 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.888 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3813 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5157 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1345 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 87 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 543 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3813 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 496 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4607 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.26 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.45 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 22.15 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3UVV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-DEC-11. REMARK 100 THE DEPOSITION ID IS D_1000069273. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JUL-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54984 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19341 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 4.240 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.5700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.29 REMARK 200 R MERGE FOR SHELL (I) : 0.74700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.220 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 2H77 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES (PH 7.3), 200 MM TRI REMARK 280 -SODIUM CITRATE DIHYDRATE, 15% ISOPROPANOL, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.55000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 42.55000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 64.56500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 82.66000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 64.56500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 82.66000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 42.55000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 64.56500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 82.66000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 42.55000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 64.56500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 82.66000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 144 REMARK 465 SER A 145 REMARK 465 HIS A 146 REMARK 465 GLY A 195 REMARK 465 GLN A 196 REMARK 465 SER A 197 REMARK 465 PRO A 198 REMARK 465 MET A 199 REMARK 465 ALA A 200 REMARK 465 SER A 201 REMARK 465 MET A 202 REMARK 465 GLY A 205 REMARK 465 GLN A 406 REMARK 465 GLU A 407 REMARK 465 VAL A 408 REMARK 465 MET B 221 REMARK 465 LYS B 222 REMARK 465 LYS B 223 REMARK 465 GLY B 224 REMARK 465 SER B 225 REMARK 465 ALA B 226 REMARK 465 GLU B 247 REMARK 465 THR B 248 REMARK 465 TYR B 249 REMARK 465 VAL B 250 REMARK 465 GLU B 251 REMARK 465 ALA B 252 REMARK 465 ASN B 253 REMARK 465 MET B 254 REMARK 465 GLY B 255 REMARK 465 LEU B 256 REMARK 465 ASN B 257 REMARK 465 PRO B 258 REMARK 465 SER B 259 REMARK 465 SER B 260 REMARK 465 HIS B 459 REMARK 465 GLN B 460 REMARK 465 MET B 461 REMARK 465 THR B 462 REMARK 465 MET B 463 REMARK 465 THR B 464 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 188 CG CD CE NZ REMARK 470 GLU A 192 CG CD OE1 OE2 REMARK 470 ILE A 194 CG1 CG2 CD1 REMARK 470 PRO A 203 CG CD REMARK 470 ASP A 204 CG OD1 OD2 REMARK 470 ASP A 206 CG OD1 OD2 REMARK 470 LYS A 218 CG CD CE NZ REMARK 470 GLU A 239 CG CD OE1 OE2 REMARK 470 GLU A 268 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 203 N - CA - CB ANGL. DEV. = 7.3 DEGREES REMARK 500 PRO A 391 CA - N - CD ANGL. DEV. = -8.9 DEGREES REMARK 500 PRO A 391 N - CA - C ANGL. DEV. = 19.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 148 -70.31 45.91 REMARK 500 GLN A 153 64.20 -105.00 REMARK 500 SER A 159 82.70 -61.00 REMARK 500 ALA A 160 -67.41 43.02 REMARK 500 ASN A 177 35.34 -78.82 REMARK 500 ALA A 178 -101.71 41.56 REMARK 500 HIS A 182 64.39 -119.49 REMARK 500 LYS A 186 45.60 -89.37 REMARK 500 GLU A 192 89.10 -37.17 REMARK 500 LYS A 207 53.78 -170.94 REMARK 500 PRO A 241 159.70 -48.01 REMARK 500 SER A 275 15.11 50.30 REMARK 500 MET A 323 37.65 -91.29 REMARK 500 ASP A 326 59.39 -102.34 REMARK 500 VAL A 333 -89.98 47.61 REMARK 500 LYS A 355 75.19 50.57 REMARK 500 CYS A 390 -143.47 -91.64 REMARK 500 PRO A 391 107.65 42.72 REMARK 500 GLU B 228 65.84 -118.44 REMARK 500 MET B 230 86.07 -161.97 REMARK 500 VAL B 320 98.66 -42.02 REMARK 500 ASP B 322 -9.02 58.18 REMARK 500 ASN B 385 92.48 65.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE T3 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 9CR B 501 DBREF 3UVV A 148 408 UNP P04625 THA_CHICK 148 408 DBREF 3UVV B 225 462 UNP P19793 RXRA_HUMAN 225 462 SEQADV 3UVV GLY A 144 UNP P04625 EXPRESSION TAG SEQADV 3UVV SER A 145 UNP P04625 EXPRESSION TAG SEQADV 3UVV HIS A 146 UNP P04625 EXPRESSION TAG SEQADV 3UVV GLU A 147 UNP P04625 EXPRESSION TAG SEQADV 3UVV MET B 221 UNP P19793 EXPRESSION TAG SEQADV 3UVV LYS B 222 UNP P19793 EXPRESSION TAG SEQADV 3UVV LYS B 223 UNP P19793 EXPRESSION TAG SEQADV 3UVV GLY B 224 UNP P19793 EXPRESSION TAG SEQADV 3UVV MET B 463 UNP P19793 EXPRESSION TAG SEQADV 3UVV THR B 464 UNP P19793 EXPRESSION TAG SEQRES 1 A 265 GLY SER HIS GLU MET ILE LYS SER LEU GLN HIS ARG PRO SEQRES 2 A 265 SER PRO SER ALA GLU GLU TRP GLU LEU ILE HIS VAL VAL SEQRES 3 A 265 THR GLU ALA HIS ARG SER THR ASN ALA GLN GLY SER HIS SEQRES 4 A 265 TRP LYS GLN LYS ARG LYS PHE LEU PRO GLU ASP ILE GLY SEQRES 5 A 265 GLN SER PRO MET ALA SER MET PRO ASP GLY ASP LYS VAL SEQRES 6 A 265 ASP LEU GLU ALA PHE SER GLU PHE THR LYS ILE ILE THR SEQRES 7 A 265 PRO ALA ILE THR ARG VAL VAL ASP PHE ALA LYS LYS LEU SEQRES 8 A 265 PRO MET PHE SER GLU LEU PRO CYS GLU ASP GLN ILE ILE SEQRES 9 A 265 LEU LEU LYS GLY CYS CYS MET GLU ILE MET SER LEU ARG SEQRES 10 A 265 ALA ALA VAL ARG TYR ASP PRO GLU SER GLU THR LEU THR SEQRES 11 A 265 LEU SER GLY GLU MET ALA VAL LYS ARG GLU GLN LEU LYS SEQRES 12 A 265 ASN GLY GLY LEU GLY VAL VAL SER ASP ALA ILE PHE ASP SEQRES 13 A 265 LEU GLY LYS SER LEU SER ALA PHE ASN LEU ASP ASP THR SEQRES 14 A 265 GLU VAL ALA LEU LEU GLN ALA VAL LEU LEU MET SER SER SEQRES 15 A 265 ASP ARG THR GLY LEU ILE CYS VAL ASP LYS ILE GLU LYS SEQRES 16 A 265 CYS GLN GLU THR TYR LEU LEU ALA PHE GLU HIS TYR ILE SEQRES 17 A 265 ASN TYR ARG LYS HIS ASN ILE PRO HIS PHE TRP PRO LYS SEQRES 18 A 265 LEU LEU MET LYS VAL THR ASP LEU ARG MET ILE GLY ALA SEQRES 19 A 265 CYS HIS ALA SER ARG PHE LEU HIS MET LYS VAL GLU CYS SEQRES 20 A 265 PRO THR GLU LEU PHE PRO PRO LEU PHE LEU GLU VAL PHE SEQRES 21 A 265 GLU ASP GLN GLU VAL SEQRES 1 B 244 MET LYS LYS GLY SER ALA ASN GLU ASP MET PRO VAL GLU SEQRES 2 B 244 ARG ILE LEU GLU ALA GLU LEU ALA VAL GLU PRO LYS THR SEQRES 3 B 244 GLU THR TYR VAL GLU ALA ASN MET GLY LEU ASN PRO SER SEQRES 4 B 244 SER PRO ASN ASP PRO VAL THR ASN ILE CYS GLN ALA ALA SEQRES 5 B 244 ASP LYS GLN LEU PHE THR LEU VAL GLU TRP ALA LYS ARG SEQRES 6 B 244 ILE PRO HIS PHE SER GLU LEU PRO LEU ASP ASP GLN VAL SEQRES 7 B 244 ILE LEU LEU ARG ALA GLY TRP ASN GLU LEU LEU ILE ALA SEQRES 8 B 244 SER PHE SER HIS ARG SER ILE ALA VAL LYS ASP GLY ILE SEQRES 9 B 244 LEU LEU ALA THR GLY LEU HIS VAL HIS ARG ASN SER ALA SEQRES 10 B 244 HIS SER ALA GLY VAL GLY ALA ILE PHE ASP ARG VAL LEU SEQRES 11 B 244 THR GLU LEU VAL SER LYS MET ARG ASP MET GLN MET ASP SEQRES 12 B 244 LYS THR GLU LEU GLY CYS LEU ARG ALA ILE VAL LEU PHE SEQRES 13 B 244 ASN PRO ASP SER LYS GLY LEU SER ASN PRO ALA GLU VAL SEQRES 14 B 244 GLU ALA LEU ARG GLU LYS VAL TYR ALA SER LEU GLU ALA SEQRES 15 B 244 TYR CYS LYS HIS LYS TYR PRO GLU GLN PRO GLY ARG PHE SEQRES 16 B 244 ALA LYS LEU LEU LEU ARG LEU PRO ALA LEU ARG SER ILE SEQRES 17 B 244 GLY LEU LYS CYS LEU GLU HIS LEU PHE PHE PHE LYS LEU SEQRES 18 B 244 ILE GLY ASP THR PRO ILE ASP THR PHE LEU MET GLU MET SEQRES 19 B 244 LEU GLU ALA PRO HIS GLN MET THR MET THR HET T3 A 501 23 HET 9CR B 501 22 HETNAM T3 3,5,3'TRIIODOTHYRONINE HETNAM 9CR (9CIS)-RETINOIC ACID HETSYN T3 T3; THYROID HORMONE; LIOTHYRONINE FORMUL 3 T3 C15 H12 I3 N O4 FORMUL 4 9CR C20 H28 O2 FORMUL 5 HOH *19(H2 O) HELIX 1 1 ALA A 160 ASN A 177 1 18 HELIX 2 2 ASP A 209 LEU A 234 1 26 HELIX 3 3 LEU A 234 GLU A 239 1 6 HELIX 4 4 GLU A 243 VAL A 263 1 21 HELIX 5 5 LYS A 281 GLY A 288 1 8 HELIX 6 6 VAL A 292 LEU A 304 1 13 HELIX 7 7 ASP A 310 MET A 323 1 14 HELIX 8 8 VAL A 333 LYS A 355 1 23 HELIX 9 9 HIS A 360 MET A 367 1 8 HELIX 10 10 MET A 367 CYS A 390 1 24 HELIX 11 11 PRO A 396 GLU A 404 1 9 HELIX 12 12 PRO B 231 GLU B 243 1 13 HELIX 13 13 ASP B 263 ARG B 285 1 23 HELIX 14 14 PRO B 293 SER B 317 1 25 HELIX 15 15 ARG B 334 ALA B 340 1 7 HELIX 16 16 VAL B 342 LEU B 353 1 12 HELIX 17 17 LEU B 353 GLN B 361 1 9 HELIX 18 18 ASP B 363 PHE B 376 1 14 HELIX 19 19 ASN B 385 TYR B 408 1 24 HELIX 20 20 GLY B 413 LEU B 420 1 8 HELIX 21 21 ARG B 421 GLY B 443 1 23 HELIX 22 22 ASP B 448 LEU B 455 1 8 SHEET 1 A 3 LYS A 188 PHE A 189 0 SHEET 2 A 3 MET A 278 VAL A 280 1 O ALA A 279 N LYS A 188 SHEET 3 A 3 LEU A 272 LEU A 274 -1 N LEU A 274 O MET A 278 SHEET 1 B 2 GLY B 323 LEU B 325 0 SHEET 2 B 2 HIS B 331 HIS B 333 -1 O VAL B 332 N ILE B 324 CISPEP 1 CYS A 390 PRO A 391 0 -7.70 SITE 1 AC1 13 PHE A 216 ILE A 219 ILE A 220 MET A 257 SITE 2 AC1 13 ARG A 260 ALA A 261 LEU A 274 SER A 275 SITE 3 AC1 13 GLY A 288 ILE A 297 HIS A 379 PHE A 399 SITE 4 AC1 13 HOH A 605 SITE 1 AC2 9 ILE B 268 GLN B 275 PHE B 313 ARG B 316 SITE 2 AC2 9 LEU B 326 ALA B 327 ILE B 345 CYS B 432 SITE 3 AC2 9 LEU B 436 CRYST1 129.130 165.320 85.100 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007744 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006049 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011751 0.00000