HEADER OXIDOREDUCTASE 30-NOV-11 3UW3 TITLE CRYSTAL STRUCTURE OF AN ASPARTATE-SEMIALDEHYDE DEHYDROGENASE FROM TITLE 2 BURKHOLDERIA THAILANDENSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ASPARTATE-SEMIALDEHYDE DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.2.1.11; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA THAILANDENSIS; SOURCE 3 ORGANISM_TAXID: 271848; SOURCE 4 STRAIN: E264 / ATCC 700388 / DSM 13276 / CIP 106301; SOURCE 5 GENE: ASD, BTH_II0675; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: AVA0421 KEYWDS STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 2 INFECTIOUS DISEASE (SSGCID), DEHYDROGENASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 3 13-SEP-23 3UW3 1 REMARK SEQADV REVDAT 2 30-OCT-13 3UW3 1 JRNL REVDAT 1 14-DEC-11 3UW3 0 JRNL AUTH L.BAUGH,L.A.GALLAGHER,R.PATRAPUVICH,M.C.CLIFTON, JRNL AUTH 2 A.S.GARDBERG,T.E.EDWARDS,B.ARMOUR,D.W.BEGLEY,S.H.DIETERICH, JRNL AUTH 3 D.M.DRANOW,J.ABENDROTH,J.W.FAIRMAN,D.FOX,B.L.STAKER,I.PHAN, JRNL AUTH 4 A.GILLESPIE,R.CHOI,S.NAKAZAWA-HEWITT,M.T.NGUYEN,A.NAPULI, JRNL AUTH 5 L.BARRETT,G.W.BUCHKO,R.STACY,P.J.MYLER,L.J.STEWART,C.MANOIL, JRNL AUTH 6 W.C.VAN VOORHIS JRNL TITL COMBINING FUNCTIONAL AND STRUCTURAL GENOMICS TO SAMPLE THE JRNL TITL 2 ESSENTIAL BURKHOLDERIA STRUCTOME. JRNL REF PLOS ONE V. 8 53851 2013 JRNL REFN ESSN 1932-6203 JRNL PMID 23382856 JRNL DOI 10.1371/JOURNAL.PONE.0053851 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.48 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 122839 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.152 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.173 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6174 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 8112 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.91 REMARK 3 BIN R VALUE (WORKING SET) : 0.1950 REMARK 3 BIN FREE R VALUE SET COUNT : 435 REMARK 3 BIN FREE R VALUE : 0.2220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5547 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 860 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.06 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.11000 REMARK 3 B22 (A**2) : -0.11000 REMARK 3 B33 (A**2) : 0.22000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.065 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.065 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.037 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.017 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5864 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3972 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7992 ; 1.427 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9774 ; 0.925 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 817 ; 5.650 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 230 ;32.821 ;24.609 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1030 ;11.209 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 40 ;22.789 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 919 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6659 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1133 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -1 A 372 REMARK 3 ORIGIN FOR THE GROUP (A): 29.4350 34.0418 4.8516 REMARK 3 T TENSOR REMARK 3 T11: 0.0164 T22: 0.0202 REMARK 3 T33: 0.0101 T12: 0.0083 REMARK 3 T13: 0.0057 T23: -0.0008 REMARK 3 L TENSOR REMARK 3 L11: 0.2382 L22: 0.6111 REMARK 3 L33: 0.2380 L12: -0.1066 REMARK 3 L13: 0.0289 L23: -0.2837 REMARK 3 S TENSOR REMARK 3 S11: -0.0172 S12: 0.0025 S13: -0.0427 REMARK 3 S21: 0.0050 S22: 0.0300 S23: 0.0432 REMARK 3 S31: 0.0323 S32: 0.0034 S33: -0.0128 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -1 B 373 REMARK 3 ORIGIN FOR THE GROUP (A): 27.9276 67.1715 -5.0326 REMARK 3 T TENSOR REMARK 3 T11: 0.0056 T22: 0.0234 REMARK 3 T33: 0.0316 T12: 0.0058 REMARK 3 T13: 0.0007 T23: 0.0117 REMARK 3 L TENSOR REMARK 3 L11: 0.3207 L22: 0.6866 REMARK 3 L33: 0.0574 L12: -0.1891 REMARK 3 L13: 0.0366 L23: 0.0368 REMARK 3 S TENSOR REMARK 3 S11: 0.0022 S12: 0.0339 S13: 0.0940 REMARK 3 S21: -0.0276 S22: -0.0092 S23: -0.0160 REMARK 3 S31: -0.0128 S32: -0.0060 S33: 0.0070 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 3UW3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-DEC-11. REMARK 100 THE DEPOSITION ID IS D_1000069281. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-OCT-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97586 REMARK 200 MONOCHROMATOR : C(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 122928 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 47.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.0500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.42100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1MB4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: INTERNAL TRACKING NUMBER 226078. REMARK 280 WIZARD 3/4 WELL F8. 0.1M MMT BUFFER/NAOH PH 9.0, 25% W/V PEG1500, REMARK 280 20% ETHYLENE GLYCOL FOR CRYO. BUTHA.17885.A.A1 PS01196 CR_24 REMARK 280 58.0MG/ML., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.22500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.48500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.55000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.48500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.22500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 51.55000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 LYS A 373 REMARK 465 GLY B -3 REMARK 465 PRO B -2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 9 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 18 CG CD OE1 NE2 REMARK 470 LYS A 63 CG CD CE NZ REMARK 470 LYS A 307 CG CD CE NZ REMARK 470 GLU A 314 CG CD OE1 OE2 REMARK 470 GLN B 18 CG CD OE1 NE2 REMARK 470 LYS B 42 CG CD CE NZ REMARK 470 LYS B 63 CG CD CE NZ REMARK 470 ASN B 90 CG OD1 ND2 REMARK 470 ASN B 124 CG OD1 ND2 REMARK 470 ASP B 210 CG OD1 OD2 REMARK 470 GLU B 314 CG CD OE1 OE2 REMARK 470 LYS B 373 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 172 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 48 -94.19 -115.45 REMARK 500 LEU A 110 73.98 -156.88 REMARK 500 SER A 224 -159.27 -146.73 REMARK 500 PRO A 227 42.43 -84.51 REMARK 500 ASP A 230 -172.18 72.38 REMARK 500 ARG A 276 11.68 -148.39 REMARK 500 LEU A 320 64.74 -116.33 REMARK 500 LEU A 356 -92.93 -92.93 REMARK 500 ALA A 359 -76.92 -154.49 REMARK 500 LYS B 48 -90.11 -115.69 REMARK 500 LEU B 110 75.59 -153.86 REMARK 500 SER B 224 -158.53 -143.88 REMARK 500 PRO B 227 42.59 -85.21 REMARK 500 ASP B 230 -171.57 70.04 REMARK 500 LEU B 320 66.06 -114.73 REMARK 500 LEU B 356 -92.84 -92.74 REMARK 500 ALA B 359 -77.51 -155.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 374 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 374 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: BUTHA.17885.A RELATED DB: TARGETDB REMARK 900 BUTHA.17885.A.A1 DBREF 3UW3 A 1 373 UNP Q2T7H5 Q2T7H5_BURTA 1 373 DBREF 3UW3 B 1 373 UNP Q2T7H5 Q2T7H5_BURTA 1 373 SEQADV 3UW3 GLY A -3 UNP Q2T7H5 EXPRESSION TAG SEQADV 3UW3 PRO A -2 UNP Q2T7H5 EXPRESSION TAG SEQADV 3UW3 GLY A -1 UNP Q2T7H5 EXPRESSION TAG SEQADV 3UW3 SER A 0 UNP Q2T7H5 EXPRESSION TAG SEQADV 3UW3 GLY B -3 UNP Q2T7H5 EXPRESSION TAG SEQADV 3UW3 PRO B -2 UNP Q2T7H5 EXPRESSION TAG SEQADV 3UW3 GLY B -1 UNP Q2T7H5 EXPRESSION TAG SEQADV 3UW3 SER B 0 UNP Q2T7H5 EXPRESSION TAG SEQRES 1 A 377 GLY PRO GLY SER MET ASN VAL GLY LEU VAL GLY TRP ARG SEQRES 2 A 377 GLY MET VAL GLY SER VAL LEU MET GLN ARG MET GLN GLU SEQRES 3 A 377 GLU GLY ASP PHE ASP LEU ILE GLU PRO VAL PHE PHE SER SEQRES 4 A 377 THR SER ASN ALA GLY GLY LYS ALA PRO SER PHE ALA LYS SEQRES 5 A 377 ASN GLU THR THR LEU LYS ASP ALA THR SER ILE ASP ASP SEQRES 6 A 377 LEU LYS LYS CYS ASP VAL ILE ILE THR CYS GLN GLY GLY SEQRES 7 A 377 ASP TYR THR ASN ASP VAL PHE PRO LYS LEU ARG ALA ALA SEQRES 8 A 377 GLY TRP ASN GLY TYR TRP ILE ASP ALA ALA SER SER LEU SEQRES 9 A 377 ARG MET LYS ASP ASP ALA VAL ILE ILE LEU ASP PRO VAL SEQRES 10 A 377 ASN LEU ASN VAL ILE LYS ASP ALA LEU VAL ASN GLY THR SEQRES 11 A 377 LYS ASN PHE ILE GLY GLY ASN CYS THR VAL SER LEU MET SEQRES 12 A 377 LEU MET ALA LEU GLY GLY LEU PHE ARG GLU ASN LEU VAL SEQRES 13 A 377 ASP TRP MET THR ALA MET THR TYR GLN ALA ALA SER GLY SEQRES 14 A 377 ALA GLY ALA GLN ASN MET ARG GLU LEU LEU ALA GLN MET SEQRES 15 A 377 GLY THR LEU ASN GLY ALA VAL ALA ALA GLN LEU ALA ASP SEQRES 16 A 377 PRO ALA SER ALA ILE LEU ASP ILE ASP ARG ARG VAL LEU SEQRES 17 A 377 ALA ALA MET ASN GLY ASP ALA MET PRO THR SER GLN PHE SEQRES 18 A 377 GLY VAL PRO LEU ALA GLY SER LEU ILE PRO TRP ILE ASP SEQRES 19 A 377 LYS ASP LEU GLY ASN GLY MET SER ARG GLU GLU TRP LYS SEQRES 20 A 377 GLY GLY ALA GLU THR ASN LYS ILE LEU GLY LYS PRO ALA SEQRES 21 A 377 MET GLY GLU PRO GLY SER VAL PRO VAL ASP GLY LEU CYS SEQRES 22 A 377 VAL ARG ILE GLY ALA MET ARG CYS HIS SER GLN ALA LEU SEQRES 23 A 377 THR ILE LYS LEU LYS LYS ASP VAL PRO LEU ASP GLU ILE SEQRES 24 A 377 ASN GLY ILE LEU ALA SER ALA ASN ASP TRP VAL LYS VAL SEQRES 25 A 377 VAL PRO ASN GLU ARG GLU ALA SER MET ARG ASP LEU SER SEQRES 26 A 377 PRO ALA LYS VAL THR GLY THR LEU SER VAL PRO VAL GLY SEQRES 27 A 377 ARG LEU ARG LYS LEU ALA MET GLY GLY GLU TYR LEU SER SEQRES 28 A 377 ALA PHE THR VAL GLY ASP GLN LEU LEU TRP GLY ALA ALA SEQRES 29 A 377 GLU PRO LEU ARG ARG MET LEU ARG ILE LEU LEU ASP LYS SEQRES 1 B 377 GLY PRO GLY SER MET ASN VAL GLY LEU VAL GLY TRP ARG SEQRES 2 B 377 GLY MET VAL GLY SER VAL LEU MET GLN ARG MET GLN GLU SEQRES 3 B 377 GLU GLY ASP PHE ASP LEU ILE GLU PRO VAL PHE PHE SER SEQRES 4 B 377 THR SER ASN ALA GLY GLY LYS ALA PRO SER PHE ALA LYS SEQRES 5 B 377 ASN GLU THR THR LEU LYS ASP ALA THR SER ILE ASP ASP SEQRES 6 B 377 LEU LYS LYS CYS ASP VAL ILE ILE THR CYS GLN GLY GLY SEQRES 7 B 377 ASP TYR THR ASN ASP VAL PHE PRO LYS LEU ARG ALA ALA SEQRES 8 B 377 GLY TRP ASN GLY TYR TRP ILE ASP ALA ALA SER SER LEU SEQRES 9 B 377 ARG MET LYS ASP ASP ALA VAL ILE ILE LEU ASP PRO VAL SEQRES 10 B 377 ASN LEU ASN VAL ILE LYS ASP ALA LEU VAL ASN GLY THR SEQRES 11 B 377 LYS ASN PHE ILE GLY GLY ASN CYS THR VAL SER LEU MET SEQRES 12 B 377 LEU MET ALA LEU GLY GLY LEU PHE ARG GLU ASN LEU VAL SEQRES 13 B 377 ASP TRP MET THR ALA MET THR TYR GLN ALA ALA SER GLY SEQRES 14 B 377 ALA GLY ALA GLN ASN MET ARG GLU LEU LEU ALA GLN MET SEQRES 15 B 377 GLY THR LEU ASN GLY ALA VAL ALA ALA GLN LEU ALA ASP SEQRES 16 B 377 PRO ALA SER ALA ILE LEU ASP ILE ASP ARG ARG VAL LEU SEQRES 17 B 377 ALA ALA MET ASN GLY ASP ALA MET PRO THR SER GLN PHE SEQRES 18 B 377 GLY VAL PRO LEU ALA GLY SER LEU ILE PRO TRP ILE ASP SEQRES 19 B 377 LYS ASP LEU GLY ASN GLY MET SER ARG GLU GLU TRP LYS SEQRES 20 B 377 GLY GLY ALA GLU THR ASN LYS ILE LEU GLY LYS PRO ALA SEQRES 21 B 377 MET GLY GLU PRO GLY SER VAL PRO VAL ASP GLY LEU CYS SEQRES 22 B 377 VAL ARG ILE GLY ALA MET ARG CYS HIS SER GLN ALA LEU SEQRES 23 B 377 THR ILE LYS LEU LYS LYS ASP VAL PRO LEU ASP GLU ILE SEQRES 24 B 377 ASN GLY ILE LEU ALA SER ALA ASN ASP TRP VAL LYS VAL SEQRES 25 B 377 VAL PRO ASN GLU ARG GLU ALA SER MET ARG ASP LEU SER SEQRES 26 B 377 PRO ALA LYS VAL THR GLY THR LEU SER VAL PRO VAL GLY SEQRES 27 B 377 ARG LEU ARG LYS LEU ALA MET GLY GLY GLU TYR LEU SER SEQRES 28 B 377 ALA PHE THR VAL GLY ASP GLN LEU LEU TRP GLY ALA ALA SEQRES 29 B 377 GLU PRO LEU ARG ARG MET LEU ARG ILE LEU LEU ASP LYS HET EDO A 374 4 HET EDO B 374 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 2(C2 H6 O2) FORMUL 5 HOH *860(H2 O) HELIX 1 1 GLY A 10 GLU A 23 1 14 HELIX 2 2 GLY A 24 ILE A 29 5 6 HELIX 3 3 SER A 58 LYS A 64 1 7 HELIX 4 4 GLY A 73 ALA A 87 1 15 HELIX 5 5 LEU A 110 ASN A 124 1 15 HELIX 6 6 ASN A 133 GLU A 149 1 17 HELIX 7 7 ALA A 162 ALA A 166 5 5 HELIX 8 8 GLY A 167 ALA A 184 1 18 HELIX 9 9 VAL A 185 ALA A 190 1 6 HELIX 10 10 ALA A 195 GLY A 209 1 15 HELIX 11 11 SER A 238 GLY A 253 1 16 HELIX 12 12 PRO A 291 SER A 301 1 11 HELIX 13 13 GLU A 312 LEU A 320 1 9 HELIX 14 14 SER A 321 THR A 326 1 6 HELIX 15 15 ALA A 360 ASP A 372 1 13 HELIX 16 16 GLY B 10 GLU B 23 1 14 HELIX 17 17 GLY B 24 ILE B 29 5 6 HELIX 18 18 SER B 58 LYS B 63 1 6 HELIX 19 19 GLY B 73 ALA B 87 1 15 HELIX 20 20 LEU B 110 ASN B 124 1 15 HELIX 21 21 ASN B 133 GLU B 149 1 17 HELIX 22 22 ALA B 162 ALA B 166 5 5 HELIX 23 23 GLY B 167 ALA B 184 1 18 HELIX 24 24 VAL B 185 ALA B 190 1 6 HELIX 25 25 ALA B 195 ASN B 208 1 14 HELIX 26 26 SER B 238 LEU B 252 1 15 HELIX 27 27 PRO B 291 SER B 301 1 11 HELIX 28 28 GLU B 312 LEU B 320 1 9 HELIX 29 29 SER B 321 THR B 326 1 6 HELIX 30 30 ALA B 359 ASP B 372 1 14 SHEET 1 A 7 LYS A 54 ASP A 55 0 SHEET 2 A 7 GLU A 30 SER A 35 1 N PHE A 33 O LYS A 54 SHEET 3 A 7 ASN A 2 VAL A 6 1 N VAL A 3 O VAL A 32 SHEET 4 A 7 VAL A 67 THR A 70 1 O ILE A 69 N GLY A 4 SHEET 5 A 7 TYR A 92 ASP A 95 1 O ILE A 94 N ILE A 68 SHEET 6 A 7 ASN A 128 GLY A 131 1 O PHE A 129 N TRP A 93 SHEET 7 A 7 ALA A 106 ILE A 109 1 N VAL A 107 O ILE A 130 SHEET 1 B 6 VAL A 265 LEU A 268 0 SHEET 2 B 6 VAL A 152 TYR A 160 1 N THR A 159 O LEU A 268 SHEET 3 B 6 CYS A 277 LEU A 286 -1 O SER A 279 N TYR A 160 SHEET 4 B 6 TYR A 345 ASP A 353 -1 O ALA A 348 N LEU A 282 SHEET 5 B 6 VAL A 331 LYS A 338 -1 N GLY A 334 O PHE A 349 SHEET 6 B 6 VAL A 306 VAL A 308 1 N LYS A 307 O VAL A 333 SHEET 1 C 7 LYS B 54 ASP B 55 0 SHEET 2 C 7 GLU B 30 SER B 35 1 N PHE B 33 O LYS B 54 SHEET 3 C 7 ASN B 2 VAL B 6 1 N VAL B 3 O VAL B 32 SHEET 4 C 7 VAL B 67 THR B 70 1 O VAL B 67 N GLY B 4 SHEET 5 C 7 TYR B 92 ASP B 95 1 O ILE B 94 N ILE B 68 SHEET 6 C 7 ASN B 128 GLY B 131 1 O GLY B 131 N ASP B 95 SHEET 7 C 7 ALA B 106 ILE B 109 1 N VAL B 107 O ILE B 130 SHEET 1 D 6 VAL B 265 LEU B 268 0 SHEET 2 D 6 VAL B 152 TYR B 160 1 N ALA B 157 O ASP B 266 SHEET 3 D 6 CYS B 277 LEU B 286 -1 O LYS B 285 N ASP B 153 SHEET 4 D 6 TYR B 345 ASP B 353 -1 O ALA B 348 N LEU B 282 SHEET 5 D 6 VAL B 331 LYS B 338 -1 N GLY B 334 O PHE B 349 SHEET 6 D 6 VAL B 306 VAL B 308 1 N LYS B 307 O VAL B 333 SITE 1 AC1 6 TRP A 305 GLU A 361 ARG A 364 ARG A 365 SITE 2 AC1 6 HOH A 379 HOH A 744 SITE 1 AC2 5 ARG B 19 GLU B 361 ARG B 364 ARG B 365 SITE 2 AC2 5 HOH B 530 CRYST1 76.450 103.100 106.970 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013080 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009699 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009348 0.00000