HEADER TRANSFERASE 07-DEC-11 3UZU TITLE THE STRUCTURE OF THE RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE A TITLE 2 FROM BURKHOLDERIA PSEUDOMALLEI COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 16S RRNA (ADENINE(1518)-N(6)/ADENINE(1519)-N(6))- COMPND 5 DIMETHYLTRANSFERASE, 16S RRNA DIMETHYLADENOSINE TRANSFERASE, 16S RRNA COMPND 6 DIMETHYLASE, S-ADENOSYLMETHIONINE-6-N', N'-ADENOSYL(RRNA) COMPND 7 DIMETHYLTRANSFERASE; COMPND 8 EC: 2.1.1.182; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA PSEUDOMALLEI; SOURCE 3 ORGANISM_TAXID: 28450; SOURCE 4 GENE: RSMA, KSGA, BURPS1710B_0874; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RNA, SSGCID, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS KEYWDS 2 DISEASE, METHYLTRANSFERASE A, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 3 13-SEP-23 3UZU 1 REMARK SEQADV REVDAT 2 11-OCT-17 3UZU 1 REMARK REVDAT 1 14-DEC-11 3UZU 0 JRNL AUTH M.C.CLIFTON,J.ABENDROTH,B.SANKARAN, JRNL AUTH 2 SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE JRNL AUTH 3 (SSGCID) JRNL TITL THE STRUCTURE OF THE RIBOSOMAL RNA SMALL SUBUNIT JRNL TITL 2 METHYLTRANSFERASE A FROM BURKHOLDERIA PSEUDOMALLEI JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.34 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 25892 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1371 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1845 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.74 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE SET COUNT : 88 REMARK 3 BIN FREE R VALUE : 0.3250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1983 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 278 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.27 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.06000 REMARK 3 B22 (A**2) : -0.05000 REMARK 3 B33 (A**2) : 0.12000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.04000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.119 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.115 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.071 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.182 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2048 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1398 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2788 ; 1.489 ; 1.983 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3388 ; 0.961 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 265 ; 6.149 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 90 ;30.557 ;22.556 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 314 ;10.619 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;18.900 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 317 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2319 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 426 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 18 A 149 REMARK 3 ORIGIN FOR THE GROUP (A): 2.1460 13.6568 14.7219 REMARK 3 T TENSOR REMARK 3 T11: 0.0341 T22: 0.0331 REMARK 3 T33: 0.0281 T12: 0.0094 REMARK 3 T13: -0.0015 T23: 0.0059 REMARK 3 L TENSOR REMARK 3 L11: 1.0277 L22: 0.8041 REMARK 3 L33: 1.0333 L12: 0.2539 REMARK 3 L13: 0.0559 L23: -0.0657 REMARK 3 S TENSOR REMARK 3 S11: -0.0214 S12: -0.0806 S13: -0.0758 REMARK 3 S21: 0.0435 S22: 0.0063 S23: -0.0535 REMARK 3 S31: 0.0721 S32: 0.0294 S33: 0.0150 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 150 A 202 REMARK 3 ORIGIN FOR THE GROUP (A): 16.0745 22.2169 18.0176 REMARK 3 T TENSOR REMARK 3 T11: 0.0449 T22: 0.0720 REMARK 3 T33: 0.0910 T12: -0.0109 REMARK 3 T13: -0.0315 T23: 0.0233 REMARK 3 L TENSOR REMARK 3 L11: 0.8766 L22: 2.4903 REMARK 3 L33: 1.1793 L12: 1.3085 REMARK 3 L13: -0.7726 L23: -0.7434 REMARK 3 S TENSOR REMARK 3 S11: 0.0101 S12: -0.1598 S13: -0.2012 REMARK 3 S21: 0.1296 S22: -0.1624 S23: -0.4127 REMARK 3 S31: 0.0479 S32: 0.2260 S33: 0.1523 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 203 A 275 REMARK 3 ORIGIN FOR THE GROUP (A): 21.5224 41.3795 5.2860 REMARK 3 T TENSOR REMARK 3 T11: 0.0356 T22: 0.0306 REMARK 3 T33: 0.0386 T12: -0.0015 REMARK 3 T13: -0.0003 T23: -0.0003 REMARK 3 L TENSOR REMARK 3 L11: 1.0174 L22: 1.0060 REMARK 3 L33: 0.4690 L12: -0.3202 REMARK 3 L13: 0.1075 L23: -0.2133 REMARK 3 S TENSOR REMARK 3 S11: 0.0015 S12: -0.0097 S13: -0.0198 REMARK 3 S21: 0.0759 S22: 0.0061 S23: 0.0689 REMARK 3 S31: -0.0264 S32: -0.0416 S33: -0.0076 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 3UZU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-DEC-11. REMARK 100 THE DEPOSITION ID IS D_1000069416. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : ASYMMETRIC CURVED CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27262 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 43.343 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.43400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.130 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.3.0 REMARK 200 STARTING MODEL: 1QYR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350, 150MM DL MALIC ACID. REMARK 280 CRYOPROTECTANT 20% ETHYLENE GLYCOL. 47.14 MG/ML BUPSA.01122.A.A1 REMARK 280 PS01140, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K, PH 7 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 45.59500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.67000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 45.59500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.67000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 293 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 530 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASN A 3 REMARK 465 SER A 4 REMARK 465 ARG A 5 REMARK 465 GLN A 6 REMARK 465 HIS A 7 REMARK 465 GLN A 8 REMARK 465 GLY A 9 REMARK 465 HIS A 10 REMARK 465 PHE A 11 REMARK 465 ALA A 12 REMARK 465 ARG A 13 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 14 CG CD CE NZ REMARK 470 ARG A 15 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 18 CG CD OE1 NE2 REMARK 470 ARG A 74 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 109 CG CD OE1 OE2 REMARK 470 GLU A 147 CG CD OE1 OE2 REMARK 470 LYS A 159 CG CD CE NZ REMARK 470 GLN A 186 CG CD OE1 NE2 REMARK 470 LYS A 190 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 68 CG HIS A 68 CD2 0.061 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 38 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 276 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 277 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: BUPSA.01122.A RELATED DB: TARGETDB REMARK 900 BUPSA.01122.A.A1, PS01140 DBREF 3UZU A 1 275 UNP Q3JVW6 RSMA_BURP1 1 275 SEQADV 3UZU GLY A -3 UNP Q3JVW6 EXPRESSION TAG SEQADV 3UZU PRO A -2 UNP Q3JVW6 EXPRESSION TAG SEQADV 3UZU GLY A -1 UNP Q3JVW6 EXPRESSION TAG SEQADV 3UZU SER A 0 UNP Q3JVW6 EXPRESSION TAG SEQRES 1 A 279 GLY PRO GLY SER MET SER ASN SER ARG GLN HIS GLN GLY SEQRES 2 A 279 HIS PHE ALA ARG LYS ARG PHE GLY GLN ASN PHE LEU VAL SEQRES 3 A 279 ASP HIS GLY VAL ILE ASP ALA ILE VAL ALA ALA ILE ARG SEQRES 4 A 279 PRO GLU ARG GLY GLU ARG MET VAL GLU ILE GLY PRO GLY SEQRES 5 A 279 LEU GLY ALA LEU THR GLY PRO VAL ILE ALA ARG LEU ALA SEQRES 6 A 279 THR PRO GLY SER PRO LEU HIS ALA VAL GLU LEU ASP ARG SEQRES 7 A 279 ASP LEU ILE GLY ARG LEU GLU GLN ARG PHE GLY GLU LEU SEQRES 8 A 279 LEU GLU LEU HIS ALA GLY ASP ALA LEU THR PHE ASP PHE SEQRES 9 A 279 GLY SER ILE ALA ARG PRO GLY ASP GLU PRO SER LEU ARG SEQRES 10 A 279 ILE ILE GLY ASN LEU PRO TYR ASN ILE SER SER PRO LEU SEQRES 11 A 279 LEU PHE HIS LEU MET SER PHE ALA PRO VAL VAL ILE ASP SEQRES 12 A 279 GLN HIS PHE MET LEU GLN ASN GLU VAL VAL GLU ARG MET SEQRES 13 A 279 VAL ALA GLU PRO GLY THR LYS ALA PHE SER ARG LEU SER SEQRES 14 A 279 VAL MET LEU GLN TYR ARG TYR VAL MET ASP LYS LEU ILE SEQRES 15 A 279 ASP VAL PRO PRO GLU SER PHE GLN PRO PRO PRO LYS VAL SEQRES 16 A 279 ASP SER ALA ILE VAL ARG MET ILE PRO HIS ALA PRO HIS SEQRES 17 A 279 GLU LEU PRO ALA VAL ASP PRO ALA VAL LEU GLY GLU VAL SEQRES 18 A 279 VAL THR ALA ALA PHE SER GLN ARG ARG LYS MET LEU ARG SEQRES 19 A 279 ASN THR LEU GLY GLY TYR ARG ASP LEU VAL ASP PHE ASP SEQRES 20 A 279 ALA LEU GLY PHE ASP LEU ALA ARG ARG ALA GLU ASP ILE SEQRES 21 A 279 GLY VAL ASP GLU TYR VAL ARG VAL ALA GLN ALA VAL ALA SEQRES 22 A 279 SER ALA ARG ALA SER GLY HET EDO A 276 4 HET EDO A 277 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 2(C2 H6 O2) FORMUL 4 HOH *278(H2 O) HELIX 1 1 ASP A 23 ARG A 35 1 13 HELIX 2 2 LEU A 52 ALA A 61 1 10 HELIX 3 3 ASP A 73 GLY A 85 1 13 HELIX 4 4 ASP A 94 PHE A 98 5 5 HELIX 5 5 ASP A 99 ALA A 104 5 6 HELIX 6 6 PRO A 119 MET A 131 1 13 HELIX 7 7 SER A 132 PRO A 135 5 4 HELIX 8 8 ASN A 146 VAL A 153 1 8 HELIX 9 9 SER A 162 ARG A 171 1 10 HELIX 10 10 PRO A 181 GLU A 183 5 3 HELIX 11 11 ALA A 202 LEU A 206 5 5 HELIX 12 12 ASP A 210 PHE A 222 1 13 HELIX 13 13 SER A 223 ARG A 225 5 3 HELIX 14 14 MET A 228 LEU A 233 1 6 HELIX 15 15 GLY A 234 ARG A 237 5 4 HELIX 16 16 ARG A 252 ILE A 256 5 5 HELIX 17 17 GLY A 257 ARG A 272 1 16 SHEET 1 A 2 PHE A 20 LEU A 21 0 SHEET 2 A 2 PHE A 185 GLN A 186 -1 O GLN A 186 N PHE A 20 SHEET 1 B 7 LEU A 88 ALA A 92 0 SHEET 2 B 7 LEU A 67 GLU A 71 1 N ALA A 69 O HIS A 91 SHEET 3 B 7 ARG A 41 ILE A 45 1 N MET A 42 O HIS A 68 SHEET 4 B 7 LEU A 112 ASN A 117 1 O ILE A 115 N VAL A 43 SHEET 5 B 7 VAL A 137 GLN A 145 1 O MET A 143 N GLY A 116 SHEET 6 B 7 SER A 193 PRO A 200 -1 O MET A 198 N GLN A 140 SHEET 7 B 7 TYR A 172 VAL A 180 -1 N LEU A 177 O ILE A 195 CISPEP 1 GLN A 186 PRO A 187 0 -12.43 SITE 1 AC1 7 GLU A 89 LEU A 90 ARG A 226 LYS A 227 SITE 2 AC1 7 SER A 274 GLY A 275 HOH A 335 SITE 1 AC2 5 GLY A 93 ASP A 94 THR A 97 PHE A 98 SITE 2 AC2 5 HOH A 321 CRYST1 91.190 49.340 61.160 90.00 95.91 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010966 0.000000 0.001135 0.00000 SCALE2 0.000000 0.020268 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016438 0.00000