HEADER TRANSPORT PROTEIN 07-DEC-11 3V09 TITLE CRYSTAL STRUCTURE OF RABBIT SERUM ALBUMIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERUM ALBUMIN; COMPND 3 CHAIN: A SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 3 ORGANISM_COMMON: EUROPEAN RABBIT,JAPANESE WHITE RABBIT,DOMESTIC SOURCE 4 RABBIT,RABBITS; SOURCE 5 ORGANISM_TAXID: 9986 KEYWDS ALLERGEN, STRUCTURAL GENOMICS, PSI-BIOLOGY, NEW YORK STRUCTURAL KEYWDS 2 GENOMICS RESEARCH CONSORTIUM, NYSGRC, CARRIER PROTEIN, TRANSPORT KEYWDS 3 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.A.MAJOREK,P.J.POREBSKI,M.CHRUSZCZ,S.C.ALMO,W.MINOR,NEW YORK AUTHOR 2 STRUCTURAL GENOMICS RESEARCH CONSORTIUM (NYSGRC) REVDAT 5 13-SEP-23 3V09 1 REMARK REVDAT 4 13-APR-22 3V09 1 AUTHOR JRNL REMARK REVDAT 3 10-JAN-18 3V09 1 COMPND REMARK HET HETNAM REVDAT 3 2 1 FORMUL ATOM REVDAT 2 10-OCT-12 3V09 1 JRNL REVDAT 1 18-JAN-12 3V09 0 JRNL AUTH K.A.MAJOREK,P.J.POREBSKI,A.DAYAL,M.D.ZIMMERMAN,K.JABLONSKA, JRNL AUTH 2 A.J.STEWART,M.CHRUSZCZ,W.MINOR JRNL TITL STRUCTURAL AND IMMUNOLOGIC CHARACTERIZATION OF BOVINE, JRNL TITL 2 HORSE, AND RABBIT SERUM ALBUMINS. JRNL REF MOL.IMMUNOL. V. 52 174 2012 JRNL REFN ISSN 0161-5890 JRNL PMID 22677715 JRNL DOI 10.1016/J.MOLIMM.2012.05.011 REMARK 2 REMARK 2 RESOLUTION. 2.27 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.27 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 29035 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1542 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.27 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1927 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.71 REMARK 3 BIN R VALUE (WORKING SET) : 0.2180 REMARK 3 BIN FREE R VALUE SET COUNT : 110 REMARK 3 BIN FREE R VALUE : 0.3370 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4516 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 106 REMARK 3 SOLVENT ATOMS : 187 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.91000 REMARK 3 B22 (A**2) : 0.83000 REMARK 3 B33 (A**2) : 0.08000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.313 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.229 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.168 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.402 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4742 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3284 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6410 ; 1.620 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8003 ; 0.980 ; 3.008 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 584 ; 5.895 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 206 ;34.355 ;24.563 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 784 ;15.071 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;19.412 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 711 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5179 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 898 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 88 REMARK 3 ORIGIN FOR THE GROUP (A): 3.8800 17.7170 37.3730 REMARK 3 T TENSOR REMARK 3 T11: 0.2336 T22: 0.0740 REMARK 3 T33: 0.1472 T12: 0.0063 REMARK 3 T13: 0.0288 T23: -0.0030 REMARK 3 L TENSOR REMARK 3 L11: 3.4331 L22: 5.6364 REMARK 3 L33: 4.3889 L12: 2.0735 REMARK 3 L13: -1.2589 L23: -1.7863 REMARK 3 S TENSOR REMARK 3 S11: 0.1737 S12: -0.1824 S13: 0.2049 REMARK 3 S21: 0.5828 S22: -0.0877 S23: 0.6722 REMARK 3 S31: -0.4151 S32: -0.2162 S33: -0.0860 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 89 A 119 REMARK 3 ORIGIN FOR THE GROUP (A): 4.0580 28.8940 26.7530 REMARK 3 T TENSOR REMARK 3 T11: 0.2118 T22: 0.0511 REMARK 3 T33: 0.2519 T12: 0.0579 REMARK 3 T13: -0.0536 T23: 0.0183 REMARK 3 L TENSOR REMARK 3 L11: 5.8297 L22: 5.0916 REMARK 3 L33: 3.7397 L12: 3.1341 REMARK 3 L13: -2.1217 L23: -1.7169 REMARK 3 S TENSOR REMARK 3 S11: 0.0564 S12: -0.0865 S13: 0.4743 REMARK 3 S21: 0.0677 S22: 0.2177 S23: 0.6635 REMARK 3 S31: -0.5142 S32: -0.3001 S33: -0.2741 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 120 A 314 REMARK 3 ORIGIN FOR THE GROUP (A): 19.2970 13.0390 19.5550 REMARK 3 T TENSOR REMARK 3 T11: 0.1086 T22: 0.1096 REMARK 3 T33: 0.1535 T12: 0.0076 REMARK 3 T13: -0.0317 T23: -0.0017 REMARK 3 L TENSOR REMARK 3 L11: 0.5524 L22: 1.1633 REMARK 3 L33: 2.1449 L12: -0.1835 REMARK 3 L13: -0.1862 L23: 0.8484 REMARK 3 S TENSOR REMARK 3 S11: 0.0269 S12: -0.0199 S13: -0.1211 REMARK 3 S21: 0.1412 S22: 0.1032 S23: -0.1371 REMARK 3 S31: 0.0427 S32: 0.3959 S33: -0.1302 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 315 A 431 REMARK 3 ORIGIN FOR THE GROUP (A): 15.8230 18.2680 -3.7010 REMARK 3 T TENSOR REMARK 3 T11: 0.0691 T22: 0.1472 REMARK 3 T33: 0.0766 T12: 0.0325 REMARK 3 T13: 0.0015 T23: -0.0387 REMARK 3 L TENSOR REMARK 3 L11: 0.4691 L22: 1.2087 REMARK 3 L33: 0.5136 L12: 0.2594 REMARK 3 L13: 0.0876 L23: 0.4197 REMARK 3 S TENSOR REMARK 3 S11: 0.0356 S12: 0.2328 S13: -0.0905 REMARK 3 S21: -0.0387 S22: 0.0442 S23: -0.0859 REMARK 3 S31: 0.0204 S32: 0.1008 S33: -0.0798 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 432 A 510 REMARK 3 ORIGIN FOR THE GROUP (A): 15.0790 32.7980 4.4660 REMARK 3 T TENSOR REMARK 3 T11: 0.1563 T22: 0.1022 REMARK 3 T33: 0.1177 T12: -0.0214 REMARK 3 T13: 0.0075 T23: -0.0176 REMARK 3 L TENSOR REMARK 3 L11: 2.5332 L22: 4.2440 REMARK 3 L33: 2.0634 L12: -1.5733 REMARK 3 L13: 0.2273 L23: -0.7953 REMARK 3 S TENSOR REMARK 3 S11: 0.0448 S12: 0.0444 S13: 0.1777 REMARK 3 S21: 0.0767 S22: 0.1259 S23: -0.1101 REMARK 3 S31: -0.2304 S32: 0.1917 S33: -0.1707 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 511 A 583 REMARK 3 ORIGIN FOR THE GROUP (A): 26.1900 52.3510 11.0330 REMARK 3 T TENSOR REMARK 3 T11: 0.3225 T22: 0.1653 REMARK 3 T33: 0.5497 T12: -0.1462 REMARK 3 T13: -0.2090 T23: 0.0098 REMARK 3 L TENSOR REMARK 3 L11: 5.2607 L22: 1.3387 REMARK 3 L33: 11.0202 L12: -1.7691 REMARK 3 L13: 4.7856 L23: 0.5987 REMARK 3 S TENSOR REMARK 3 S11: -0.9315 S12: 0.1213 S13: 1.5960 REMARK 3 S21: 0.1394 S22: 0.0430 S23: -0.7238 REMARK 3 S31: -1.4080 S32: 0.5218 S33: 0.8885 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3V09 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-DEC-11. REMARK 100 THE DEPOSITION ID IS D_1000069431. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-MAR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : C(111) DIAMOND LAUE REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : BERYLLIUM LENS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30630 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.270 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : 0.07900 REMARK 200 FOR THE DATA SET : 22.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.27 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.70000 REMARK 200 R SYM FOR SHELL (I) : 0.70000 REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000 MOLREP REMARK 200 STARTING MODEL: 3V08 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES, 30% PEG400, PH 6.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.73150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.42550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.94200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.42550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.73150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.94200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 584 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 41 CD CE NZ REMARK 470 LEU A 80 CG CD1 CD2 REMARK 470 ARG A 81 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 82 CG OD1 OD2 REMARK 470 TYR A 84 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP A 86 CG OD1 OD2 REMARK 470 ASP A 89 CG OD1 OD2 REMARK 470 LYS A 94 CG CD CE NZ REMARK 470 LYS A 181 CE NZ REMARK 470 LYS A 276 CG CD CE NZ REMARK 470 LYS A 313 CG CD CE NZ REMARK 470 ALA A 368 CB REMARK 470 LYS A 372 CD CE NZ REMARK 470 LYS A 436 CG CD CE NZ REMARK 470 LYS A 439 CG CD CE NZ REMARK 470 GLU A 444 CG CD OE1 OE2 REMARK 470 GLU A 471 CD OE1 OE2 REMARK 470 GLU A 505 CG CD OE1 OE2 REMARK 470 ASP A 512 CG OD1 OD2 REMARK 470 LYS A 536 NZ REMARK 470 ASP A 542 CG OD1 OD2 REMARK 470 GLU A 550 CG CD OE1 OE2 REMARK 470 ASP A 556 CG OD1 OD2 REMARK 470 LYS A 557 CG CD CE NZ REMARK 470 LYS A 564 CG CD CE NZ REMARK 470 PHE A 568 CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL A 570 CG1 CG2 REMARK 470 LYS A 574 CG CD CE NZ REMARK 470 GLU A 577 CG CD OE1 OE2 REMARK 470 LYS A 580 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 UNK UNX A 589 UNK UNX A 590 1.26 REMARK 500 UNK UNX A 590 UNK UNX A 591 1.27 REMARK 500 UNK UNX A 603 UNK UNX A 604 1.50 REMARK 500 UNK UNX A 596 UNK UNX A 597 1.52 REMARK 500 UNK UNX A 609 UNK UNX A 610 1.53 REMARK 500 UNK UNX A 599 UNK UNX A 600 1.53 REMARK 500 UNK UNX A 594 UNK UNX A 598 1.53 REMARK 500 UNK UNX A 598 UNK UNX A 599 1.53 REMARK 500 UNK UNX A 605 UNK UNX A 606 1.53 REMARK 500 UNK UNX A 590 UNK UNX A 592 1.53 REMARK 500 UNK UNX A 608 UNK UNX A 609 1.53 REMARK 500 UNK UNX A 602 UNK UNX A 603 1.54 REMARK 500 UNK UNX A 607 UNK UNX A 608 1.54 REMARK 500 UNK UNX A 601 UNK UNX A 602 1.54 REMARK 500 UNK UNX A 595 UNK UNX A 596 1.54 REMARK 500 UNK UNX A 606 UNK UNX A 607 1.55 REMARK 500 UNK UNX A 592 UNK UNX A 593 1.55 REMARK 500 UNK UNX A 600 UNK UNX A 601 1.56 REMARK 500 UNK UNX A 594 UNK UNX A 595 1.56 REMARK 500 UNK UNX A 593 UNK UNX A 594 1.57 REMARK 500 UNK UNX A 601 UNK UNX A 605 1.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 61 -1.42 72.70 REMARK 500 TYR A 84 -68.32 -136.32 REMARK 500 TYR A 150 109.11 -57.91 REMARK 500 ALA A 171 153.62 -45.64 REMARK 500 ALA A 322 60.10 -152.55 REMARK 500 ASP A 563 64.38 69.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MES A 585 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 586 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 587 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MES A 588 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 611 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 612 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 613 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 615 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 616 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 A 617 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGRC-491005 RELATED DB: TARGETDB DBREF 3V09 A 1 584 UNP P49065 ALBU_RABIT 25 608 SEQRES 1 A 584 GLU ALA HIS LYS SER GLU ILE ALA HIS ARG PHE ASN ASP SEQRES 2 A 584 VAL GLY GLU GLU HIS PHE ILE GLY LEU VAL LEU ILE THR SEQRES 3 A 584 PHE SER GLN TYR LEU GLN LYS CYS PRO TYR GLU GLU HIS SEQRES 4 A 584 ALA LYS LEU VAL LYS GLU VAL THR ASP LEU ALA LYS ALA SEQRES 5 A 584 CYS VAL ALA ASP GLU SER ALA ALA ASN CYS ASP LYS SER SEQRES 6 A 584 LEU HIS ASP ILE PHE GLY ASP LYS ILE CYS ALA LEU PRO SEQRES 7 A 584 SER LEU ARG ASP THR TYR GLY ASP VAL ALA ASP CYS CYS SEQRES 8 A 584 GLU LYS LYS GLU PRO GLU ARG ASN GLU CYS PHE LEU HIS SEQRES 9 A 584 HIS LYS ASP ASP LYS PRO ASP LEU PRO PRO PHE ALA ARG SEQRES 10 A 584 PRO GLU ALA ASP VAL LEU CYS LYS ALA PHE HIS ASP ASP SEQRES 11 A 584 GLU LYS ALA PHE PHE GLY HIS TYR LEU TYR GLU VAL ALA SEQRES 12 A 584 ARG ARG HIS PRO TYR PHE TYR ALA PRO GLU LEU LEU TYR SEQRES 13 A 584 TYR ALA GLN LYS TYR LYS ALA ILE LEU THR GLU CYS CYS SEQRES 14 A 584 GLU ALA ALA ASP LYS GLY ALA CYS LEU THR PRO LYS LEU SEQRES 15 A 584 ASP ALA LEU GLU GLY LYS SER LEU ILE SER ALA ALA GLN SEQRES 16 A 584 GLU ARG LEU ARG CYS ALA SER ILE GLN LYS PHE GLY ASP SEQRES 17 A 584 ARG ALA TYR LYS ALA TRP ALA LEU VAL ARG LEU SER GLN SEQRES 18 A 584 ARG PHE PRO LYS ALA ASP PHE THR ASP ILE SER LYS ILE SEQRES 19 A 584 VAL THR ASP LEU THR LYS VAL HIS LYS GLU CYS CYS HIS SEQRES 20 A 584 GLY ASP LEU LEU GLU CYS ALA ASP ASP ARG ALA ASP LEU SEQRES 21 A 584 ALA LYS TYR MET CYS GLU HIS GLN GLU THR ILE SER SER SEQRES 22 A 584 HIS LEU LYS GLU CYS CYS ASP LYS PRO ILE LEU GLU LYS SEQRES 23 A 584 ALA HIS CYS ILE TYR GLY LEU HIS ASN ASP GLU THR PRO SEQRES 24 A 584 ALA GLY LEU PRO ALA VAL ALA GLU GLU PHE VAL GLU ASP SEQRES 25 A 584 LYS ASP VAL CYS LYS ASN TYR GLU GLU ALA LYS ASP LEU SEQRES 26 A 584 PHE LEU GLY LYS PHE LEU TYR GLU TYR SER ARG ARG HIS SEQRES 27 A 584 PRO ASP TYR SER VAL VAL LEU LEU LEU ARG LEU GLY LYS SEQRES 28 A 584 ALA TYR GLU ALA THR LEU LYS LYS CYS CYS ALA THR ASP SEQRES 29 A 584 ASP PRO HIS ALA CYS TYR ALA LYS VAL LEU ASP GLU PHE SEQRES 30 A 584 GLN PRO LEU VAL ASP GLU PRO LYS ASN LEU VAL LYS GLN SEQRES 31 A 584 ASN CYS GLU LEU TYR GLU GLN LEU GLY ASP TYR ASN PHE SEQRES 32 A 584 GLN ASN ALA LEU LEU VAL ARG TYR THR LYS LYS VAL PRO SEQRES 33 A 584 GLN VAL SER THR PRO THR LEU VAL GLU ILE SER ARG SER SEQRES 34 A 584 LEU GLY LYS VAL GLY SER LYS CYS CYS LYS HIS PRO GLU SEQRES 35 A 584 ALA GLU ARG LEU PRO CYS VAL GLU ASP TYR LEU SER VAL SEQRES 36 A 584 VAL LEU ASN ARG LEU CYS VAL LEU HIS GLU LYS THR PRO SEQRES 37 A 584 VAL SER GLU LYS VAL THR LYS CYS CYS SER GLU SER LEU SEQRES 38 A 584 VAL ASP ARG ARG PRO CYS PHE SER ALA LEU GLY PRO ASP SEQRES 39 A 584 GLU THR TYR VAL PRO LYS GLU PHE ASN ALA GLU THR PHE SEQRES 40 A 584 THR PHE HIS ALA ASP ILE CYS THR LEU PRO GLU THR GLU SEQRES 41 A 584 ARG LYS ILE LYS LYS GLN THR ALA LEU VAL GLU LEU VAL SEQRES 42 A 584 LYS HIS LYS PRO HIS ALA THR ASN ASP GLN LEU LYS THR SEQRES 43 A 584 VAL VAL GLY GLU PHE THR ALA LEU LEU ASP LYS CYS CYS SEQRES 44 A 584 SER ALA GLU ASP LYS GLU ALA CYS PHE ALA VAL GLU GLY SEQRES 45 A 584 PRO LYS LEU VAL GLU SER SER LYS ALA THR LEU GLY HET MES A 585 12 HET PG4 A 586 13 HET PG4 A 587 13 HET MES A 588 12 HET UNX A 589 1 HET UNX A 590 1 HET UNX A 591 1 HET UNX A 592 1 HET UNX A 593 1 HET UNX A 594 1 HET UNX A 595 1 HET UNX A 596 1 HET UNX A 597 1 HET UNX A 598 1 HET UNX A 599 1 HET UNX A 600 1 HET UNX A 601 1 HET UNX A 602 1 HET UNX A 603 1 HET UNX A 604 1 HET UNX A 605 1 HET UNX A 606 1 HET UNX A 607 1 HET UNX A 608 1 HET UNX A 609 1 HET UNX A 610 1 HET EDO A 611 4 HET EDO A 612 4 HET EDO A 613 4 HET EDO A 614 4 HET EDO A 615 4 HET CL A 616 1 HET PG4 A 617 13 HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM UNX UNKNOWN ATOM OR ION HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 MES 2(C6 H13 N O4 S) FORMUL 3 PG4 3(C8 H18 O5) FORMUL 6 UNX 22(X) FORMUL 28 EDO 5(C2 H6 O2) FORMUL 33 CL CL 1- FORMUL 35 HOH *187(H2 O) HELIX 1 1 SER A 5 LEU A 31 1 27 HELIX 2 2 PRO A 35 ASP A 56 1 22 HELIX 3 3 SER A 65 ALA A 76 1 12 HELIX 4 4 GLY A 85 CYS A 91 1 7 HELIX 5 5 PRO A 96 HIS A 105 1 10 HELIX 6 6 GLU A 119 ASP A 130 1 12 HELIX 7 7 ASP A 130 HIS A 146 1 17 HELIX 8 8 TYR A 150 CYS A 169 1 20 HELIX 9 9 ASP A 173 GLY A 207 1 35 HELIX 10 10 GLY A 207 PHE A 223 1 17 HELIX 11 11 ASP A 227 HIS A 247 1 21 HELIX 12 12 ASP A 249 HIS A 267 1 19 HELIX 13 13 GLN A 268 ILE A 271 5 4 HELIX 14 14 SER A 272 CYS A 278 5 7 HELIX 15 15 PRO A 282 LEU A 293 1 12 HELIX 16 16 VAL A 305 VAL A 310 1 6 HELIX 17 17 ASP A 314 ALA A 322 1 9 HELIX 18 18 ALA A 322 ARG A 337 1 16 HELIX 19 19 SER A 342 ALA A 362 1 21 HELIX 20 20 ASP A 365 ALA A 371 1 7 HELIX 21 21 LEU A 374 GLU A 376 5 3 HELIX 22 22 PHE A 377 VAL A 415 1 39 HELIX 23 23 SER A 419 CYS A 438 1 20 HELIX 24 24 PRO A 441 THR A 467 1 27 HELIX 25 25 SER A 470 SER A 480 1 11 HELIX 26 26 ASP A 483 ALA A 490 1 8 HELIX 27 27 ASN A 503 PHE A 507 5 5 HELIX 28 28 ALA A 511 LEU A 516 5 6 HELIX 29 29 PRO A 517 LYS A 536 1 20 HELIX 30 30 THR A 540 CYS A 559 1 20 HELIX 31 31 ASP A 563 LEU A 583 1 21 SSBOND 1 CYS A 53 CYS A 62 1555 1555 2.00 SSBOND 2 CYS A 75 CYS A 91 1555 1555 2.05 SSBOND 3 CYS A 90 CYS A 101 1555 1555 2.09 SSBOND 4 CYS A 124 CYS A 169 1555 1555 2.04 SSBOND 5 CYS A 168 CYS A 177 1555 1555 2.08 SSBOND 6 CYS A 200 CYS A 246 1555 1555 2.00 SSBOND 7 CYS A 245 CYS A 253 1555 1555 2.03 SSBOND 8 CYS A 265 CYS A 279 1555 1555 2.02 SSBOND 9 CYS A 278 CYS A 289 1555 1555 2.11 SSBOND 10 CYS A 316 CYS A 361 1555 1555 2.13 SSBOND 11 CYS A 360 CYS A 369 1555 1555 2.05 SSBOND 12 CYS A 392 CYS A 438 1555 1555 2.07 SSBOND 13 CYS A 437 CYS A 448 1555 1555 2.08 SSBOND 14 CYS A 461 CYS A 477 1555 1555 2.02 SSBOND 15 CYS A 476 CYS A 487 1555 1555 2.13 SSBOND 16 CYS A 514 CYS A 559 1555 1555 2.06 SSBOND 17 CYS A 558 CYS A 567 1555 1555 2.04 CISPEP 1 GLU A 95 PRO A 96 0 3.39 SITE 1 AC1 8 LEU A 387 ASN A 391 PHE A 403 ARG A 410 SITE 2 AC1 8 TYR A 411 LEU A 430 LEU A 453 SER A 489 SITE 1 AC2 5 ASN A 402 ASN A 405 ASN A 541 LYS A 545 SITE 2 AC2 5 HOH A 793 SITE 1 AC3 5 ILE A 20 LEU A 24 TYR A 36 VAL A 43 SITE 2 AC3 5 LYS A 132 SITE 1 AC4 8 PHE A 115 ARG A 117 VAL A 142 HIS A 146 SITE 2 AC4 8 TYR A 161 GLU A 186 LEU A 190 HOH A 686 SITE 1 AC5 2 GLN A 204 LYS A 389 SITE 1 AC6 1 HOH A 794 SITE 1 AC7 2 SER A 489 LEU A 491 SITE 1 AC8 1 ASP A 249 SITE 1 AC9 2 TYR A 150 ARG A 257 SITE 1 BC1 2 ALA A 362 ASP A 400 CRYST1 75.463 81.884 104.851 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013252 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012212 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009537 0.00000