HEADER HYDROLASE 08-DEC-11 3V0J TITLE CRYSTAL STRUCTURE OF CIONA INTESTINALIS VOLTAGE SENSOR-CONTAINING TITLE 2 PHOSPHATASE (CI-VSP), RESIDUES 241-576(C363S), DELETION OF 401-405 COMPND MOL_ID: 1; COMPND 2 MOLECULE: VOLTAGE-SENSOR CONTAINING PHOSPHATASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 241-576; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CIONA INTESTINALIS; SOURCE 3 ORGANISM_COMMON: TRANSPARENT SEA SQUIRT; SOURCE 4 ORGANISM_TAXID: 7719; SOURCE 5 GENE: CI-VSP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA DE3 PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS PTP, C2, PHOSPHATASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR L.LIU,S.C.KOHOUT,Q.XU,S.MULLER,C.KIMBERLIN,E.Y.ISACOFF,D.L.MINOR REVDAT 4 13-SEP-23 3V0J 1 REMARK SEQADV REVDAT 3 08-OCT-14 3V0J 1 AUTHOR REVDAT 2 25-JUL-12 3V0J 1 JRNL REVDAT 1 09-MAY-12 3V0J 0 JRNL AUTH L.LIU,S.C.KOHOUT,Q.XU,S.MULLER,C.R.KIMBERLIN,E.Y.ISACOFF, JRNL AUTH 2 D.L.MINOR JRNL TITL A GLUTAMATE SWITCH CONTROLS VOLTAGE-SENSITIVE PHOSPHATASE JRNL TITL 2 FUNCTION. JRNL REF NAT.STRUCT.MOL.BIOL. V. 19 633 2012 JRNL REFN ISSN 1545-9993 JRNL PMID 22562138 JRNL DOI 10.1038/NSMB.2289 REMARK 2 REMARK 2 RESOLUTION. 1.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 83.91 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 64627 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3441 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.72 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4715 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.16 REMARK 3 BIN R VALUE (WORKING SET) : 0.2910 REMARK 3 BIN FREE R VALUE SET COUNT : 258 REMARK 3 BIN FREE R VALUE : 0.3230 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5156 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 506 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.53000 REMARK 3 B22 (A**2) : 2.86000 REMARK 3 B33 (A**2) : -1.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.31000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.121 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.117 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.085 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.840 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5439 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7370 ; 1.107 ; 1.952 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 686 ; 5.851 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 267 ;37.042 ;23.483 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 992 ;13.990 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 42 ;14.264 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 789 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4152 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3244 ; 0.570 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5287 ; 1.091 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2195 ; 1.536 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2058 ; 2.540 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 252 A 570 REMARK 3 ORIGIN FOR THE GROUP (A): 6.8980 -0.0700 34.3590 REMARK 3 T TENSOR REMARK 3 T11: 0.1156 T22: 0.0495 REMARK 3 T33: 0.1556 T12: -0.0008 REMARK 3 T13: 0.0025 T23: 0.0205 REMARK 3 L TENSOR REMARK 3 L11: 0.7851 L22: 0.0427 REMARK 3 L33: 0.6346 L12: -0.0057 REMARK 3 L13: -0.4424 L23: 0.1254 REMARK 3 S TENSOR REMARK 3 S11: -0.0221 S12: 0.0146 S13: -0.0034 REMARK 3 S21: -0.0140 S22: -0.0162 S23: 0.0152 REMARK 3 S31: -0.0657 S32: -0.0220 S33: 0.0383 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 251 B 570 REMARK 3 ORIGIN FOR THE GROUP (A): 6.8110 -9.7700 -5.8000 REMARK 3 T TENSOR REMARK 3 T11: 0.1240 T22: 0.0462 REMARK 3 T33: 0.1471 T12: -0.0001 REMARK 3 T13: -0.0021 T23: -0.0090 REMARK 3 L TENSOR REMARK 3 L11: 0.9780 L22: 0.0834 REMARK 3 L33: 0.8900 L12: 0.2001 REMARK 3 L13: -0.5488 L23: -0.2634 REMARK 3 S TENSOR REMARK 3 S11: -0.0037 S12: -0.0418 S13: -0.0428 REMARK 3 S21: 0.0069 S22: -0.0065 S23: -0.0250 REMARK 3 S31: -0.0513 S32: -0.0027 S33: 0.0102 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 5 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 2 REMARK 3 RESIDUE RANGE : B 1 B 1 REMARK 3 RESIDUE RANGE : A 571 A 575 REMARK 3 RESIDUE RANGE : B 2 B 237 REMARK 3 RESIDUE RANGE : B 571 B 575 REMARK 3 ORIGIN FOR THE GROUP (A): 5.796 -14.928 -0.091 REMARK 3 T TENSOR REMARK 3 T11: 0.1269 T22: 0.0754 REMARK 3 T33: 0.1335 T12: -0.0028 REMARK 3 T13: 0.0018 T23: 0.0092 REMARK 3 L TENSOR REMARK 3 L11: 0.0312 L22: 0.0216 REMARK 3 L33: 0.3516 L12: -0.0180 REMARK 3 L13: -0.0125 L23: 0.0160 REMARK 3 S TENSOR REMARK 3 S11: -0.0026 S12: -0.0006 S13: -0.0034 REMARK 3 S21: -0.0011 S22: -0.0147 S23: -0.0047 REMARK 3 S31: -0.0283 S32: -0.0144 S33: 0.0172 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3V0J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-DEC-11. REMARK 100 THE DEPOSITION ID IS D_1000069441. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1158 REMARK 200 MONOCHROMATOR : KHOZU DOUBLE FLAT CRYSTAL REMARK 200 OPTICS : DOUBLE CRYSTAL SI(111) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68903 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.720 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.11600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.72 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.74000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB: 3V0D REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 17.5-22.5% PEG 2000, 0.1 M AMMONIUM REMARK 280 DIHYDROPHOSPHATE, 0.1 M TRIS-HCL, PH 8.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.40200 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: TWO COPIES IN ASYMMETRIC UNIT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 238 REMARK 465 HIS A 239 REMARK 465 MET A 240 REMARK 465 LYS A 241 REMARK 465 ALA A 242 REMARK 465 SER A 243 REMARK 465 SER A 244 REMARK 465 ARG A 245 REMARK 465 ARG A 246 REMARK 465 THR A 247 REMARK 465 ILE A 248 REMARK 465 SER A 249 REMARK 465 GLN A 250 REMARK 465 ASN A 251 REMARK 465 ILE A 576 REMARK 465 GLY B 238 REMARK 465 HIS B 239 REMARK 465 MET B 240 REMARK 465 LYS B 241 REMARK 465 ALA B 242 REMARK 465 SER B 243 REMARK 465 SER B 244 REMARK 465 ARG B 245 REMARK 465 ARG B 246 REMARK 465 THR B 247 REMARK 465 ILE B 248 REMARK 465 SER B 249 REMARK 465 GLN B 250 REMARK 465 ILE B 576 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 253 29.73 -78.66 REMARK 500 SER A 279 -21.29 -140.80 REMARK 500 LEU A 284 -72.76 58.05 REMARK 500 ARG A 286 65.32 -150.32 REMARK 500 ASP A 302 15.63 55.10 REMARK 500 HIS A 323 52.72 -98.81 REMARK 500 SER A 363 -136.41 -132.12 REMARK 500 LYS A 367 -85.79 -115.87 REMARK 500 ARG A 398 -61.93 -125.94 REMARK 500 ASP A 400 8.86 59.64 REMARK 500 ASN A 456 15.21 -145.13 REMARK 500 ASN A 550 -56.33 104.01 REMARK 500 ASP B 302 17.86 57.79 REMARK 500 HIS B 323 49.83 -92.46 REMARK 500 ASN B 333 -167.68 -128.66 REMARK 500 SER B 363 -135.88 -134.44 REMARK 500 LYS B 367 -92.37 -117.32 REMARK 500 ARG B 398 -58.32 -127.23 REMARK 500 ASP B 400 -3.62 66.83 REMARK 500 ASN B 456 11.16 -144.52 REMARK 500 ASN B 550 -54.59 110.80 REMARK 500 GLU B 574 41.01 -73.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3V0D RELATED DB: PDB REMARK 900 DELETION OF RESIDUES 401-405 REMARK 900 RELATED ID: 3V0E RELATED DB: PDB REMARK 900 RELATED ID: 3V0F RELATED DB: PDB REMARK 900 RELATED ID: 3V0G RELATED DB: PDB REMARK 900 RELATED ID: 3V0H RELATED DB: PDB REMARK 900 RELATED ID: 3V0I RELATED DB: PDB DBREF 3V0J A 241 576 UNP Q4W8A1 Q4W8A1_CIOIN 241 576 DBREF 3V0J B 241 576 UNP Q4W8A1 Q4W8A1_CIOIN 241 576 SEQADV 3V0J GLY A 238 UNP Q4W8A1 EXPRESSION TAG SEQADV 3V0J HIS A 239 UNP Q4W8A1 EXPRESSION TAG SEQADV 3V0J MET A 240 UNP Q4W8A1 EXPRESSION TAG SEQADV 3V0J SER A 363 UNP Q4W8A1 CYS 363 ENGINEERED MUTATION SEQADV 3V0J A UNP Q4W8A1 ASP 400 DELETION SEQADV 3V0J A UNP Q4W8A1 PHE 401 DELETION SEQADV 3V0J A UNP Q4W8A1 GLU 402 DELETION SEQADV 3V0J A UNP Q4W8A1 VAL 403 DELETION SEQADV 3V0J A UNP Q4W8A1 GLY 404 DELETION SEQADV 3V0J GLY B 238 UNP Q4W8A1 EXPRESSION TAG SEQADV 3V0J HIS B 239 UNP Q4W8A1 EXPRESSION TAG SEQADV 3V0J MET B 240 UNP Q4W8A1 EXPRESSION TAG SEQADV 3V0J SER B 363 UNP Q4W8A1 CYS 363 ENGINEERED MUTATION SEQADV 3V0J B UNP Q4W8A1 ASP 400 DELETION SEQADV 3V0J B UNP Q4W8A1 PHE 401 DELETION SEQADV 3V0J B UNP Q4W8A1 GLU 402 DELETION SEQADV 3V0J B UNP Q4W8A1 VAL 403 DELETION SEQADV 3V0J B UNP Q4W8A1 GLY 404 DELETION SEQRES 1 A 334 GLY HIS MET LYS ALA SER SER ARG ARG THR ILE SER GLN SEQRES 2 A 334 ASN LYS ARG ARG TYR ARG LYS ASP GLY PHE ASP LEU ASP SEQRES 3 A 334 LEU THR TYR VAL THR ASP HIS VAL ILE ALA MET SER PHE SEQRES 4 A 334 PRO SER SER GLY ARG GLN SER LEU PHE ARG ASN PRO ILE SEQRES 5 A 334 GLY GLU VAL SER ARG PHE PHE LYS THR LYS HIS PRO ASP SEQRES 6 A 334 LYS PHE ARG ILE TYR ASN LEU CYS SER GLU ARG GLY TYR SEQRES 7 A 334 ASP GLU THR LYS PHE ASP ASN HIS VAL TYR ARG VAL MET SEQRES 8 A 334 ILE ASP ASP HIS ASN VAL PRO THR LEU VAL ASP LEU LEU SEQRES 9 A 334 LYS PHE ILE ASP ASP ALA LYS VAL TRP MET THR SER ASP SEQRES 10 A 334 PRO ASP HIS VAL ILE ALA ILE HIS SER LYS GLY GLY LYS SEQRES 11 A 334 GLY ARG THR GLY THR LEU VAL SER SER TRP LEU LEU GLU SEQRES 12 A 334 ASP GLY LYS PHE ASP THR ALA LYS GLU ALA LEU GLU TYR SEQRES 13 A 334 PHE GLY SER ARG ARG THR ASP VAL PHE GLN GLY VAL GLU SEQRES 14 A 334 THR ALA SER GLN ILE ARG TYR VAL GLY TYR PHE GLU LYS SEQRES 15 A 334 ILE LYS LYS ASN TYR GLY GLY GLN LEU PRO PRO MET LYS SEQRES 16 A 334 LYS LEU LYS VAL THR GLY VAL THR ILE THR ALA ILE GLN SEQRES 17 A 334 GLY VAL GLY ARG GLY ASN GLY SER ASP LEU SER MET GLN SEQRES 18 A 334 ILE VAL SER GLU ARG GLN GLU VAL LEU LEU CYS LYS PHE SEQRES 19 A 334 ALA GLU GLY TYR ASN CYS ALA LEU GLN TYR ASP ALA THR SEQRES 20 A 334 ASP ASP CYS VAL THR CYS GLU VAL LYS ASN CYS PRO VAL SEQRES 21 A 334 LEU ALA GLY ASP ILE LYS VAL ARG PHE MET SER THR SER SEQRES 22 A 334 LYS SER LEU PRO ARG GLY TYR ASP ASN CYS PRO PHE TYR SEQRES 23 A 334 PHE TRP PHE ASN THR SER LEU VAL GLU GLY ASP HIS VAL SEQRES 24 A 334 THR LEU LYS ARG GLU GLU ILE ASP ASN PRO HIS LYS LYS SEQRES 25 A 334 LYS THR TRP LYS ILE TYR ARG ASP ASN PHE THR VAL LYS SEQRES 26 A 334 LEU THR PHE SER ASP ALA GLU ASP ILE SEQRES 1 B 334 GLY HIS MET LYS ALA SER SER ARG ARG THR ILE SER GLN SEQRES 2 B 334 ASN LYS ARG ARG TYR ARG LYS ASP GLY PHE ASP LEU ASP SEQRES 3 B 334 LEU THR TYR VAL THR ASP HIS VAL ILE ALA MET SER PHE SEQRES 4 B 334 PRO SER SER GLY ARG GLN SER LEU PHE ARG ASN PRO ILE SEQRES 5 B 334 GLY GLU VAL SER ARG PHE PHE LYS THR LYS HIS PRO ASP SEQRES 6 B 334 LYS PHE ARG ILE TYR ASN LEU CYS SER GLU ARG GLY TYR SEQRES 7 B 334 ASP GLU THR LYS PHE ASP ASN HIS VAL TYR ARG VAL MET SEQRES 8 B 334 ILE ASP ASP HIS ASN VAL PRO THR LEU VAL ASP LEU LEU SEQRES 9 B 334 LYS PHE ILE ASP ASP ALA LYS VAL TRP MET THR SER ASP SEQRES 10 B 334 PRO ASP HIS VAL ILE ALA ILE HIS SER LYS GLY GLY LYS SEQRES 11 B 334 GLY ARG THR GLY THR LEU VAL SER SER TRP LEU LEU GLU SEQRES 12 B 334 ASP GLY LYS PHE ASP THR ALA LYS GLU ALA LEU GLU TYR SEQRES 13 B 334 PHE GLY SER ARG ARG THR ASP VAL PHE GLN GLY VAL GLU SEQRES 14 B 334 THR ALA SER GLN ILE ARG TYR VAL GLY TYR PHE GLU LYS SEQRES 15 B 334 ILE LYS LYS ASN TYR GLY GLY GLN LEU PRO PRO MET LYS SEQRES 16 B 334 LYS LEU LYS VAL THR GLY VAL THR ILE THR ALA ILE GLN SEQRES 17 B 334 GLY VAL GLY ARG GLY ASN GLY SER ASP LEU SER MET GLN SEQRES 18 B 334 ILE VAL SER GLU ARG GLN GLU VAL LEU LEU CYS LYS PHE SEQRES 19 B 334 ALA GLU GLY TYR ASN CYS ALA LEU GLN TYR ASP ALA THR SEQRES 20 B 334 ASP ASP CYS VAL THR CYS GLU VAL LYS ASN CYS PRO VAL SEQRES 21 B 334 LEU ALA GLY ASP ILE LYS VAL ARG PHE MET SER THR SER SEQRES 22 B 334 LYS SER LEU PRO ARG GLY TYR ASP ASN CYS PRO PHE TYR SEQRES 23 B 334 PHE TRP PHE ASN THR SER LEU VAL GLU GLY ASP HIS VAL SEQRES 24 B 334 THR LEU LYS ARG GLU GLU ILE ASP ASN PRO HIS LYS LYS SEQRES 25 B 334 LYS THR TRP LYS ILE TYR ARG ASP ASN PHE THR VAL LYS SEQRES 26 B 334 LEU THR PHE SER ASP ALA GLU ASP ILE HET PO4 A 2 5 HET PO4 B 1 5 HETNAM PO4 PHOSPHATE ION FORMUL 3 PO4 2(O4 P 3-) FORMUL 5 HOH *506(H2 O) HELIX 1 1 ILE A 289 HIS A 300 1 12 HELIX 2 2 ASP A 316 ASP A 321 5 6 HELIX 3 3 THR A 336 SER A 353 1 18 HELIX 4 4 LYS A 367 ASP A 381 1 15 HELIX 5 5 THR A 386 ARG A 398 1 13 HELIX 6 6 THR A 412 TYR A 429 1 18 HELIX 7 7 GLY A 521 CYS A 525 5 5 HELIX 8 8 SER A 534 VAL A 536 5 3 HELIX 9 9 GLU A 546 ILE A 548 5 3 HELIX 10 10 LYS A 553 TRP A 557 5 5 HELIX 11 11 ILE B 289 HIS B 300 1 12 HELIX 12 12 ASP B 316 ASP B 321 5 6 HELIX 13 13 THR B 336 ASP B 354 1 19 HELIX 14 14 LYS B 367 ASP B 381 1 15 HELIX 15 15 THR B 386 ARG B 398 1 13 HELIX 16 16 THR B 412 ASN B 428 1 17 HELIX 17 17 GLY B 521 CYS B 525 5 5 HELIX 18 18 SER B 534 VAL B 536 5 3 HELIX 19 19 GLU B 546 ILE B 548 5 3 HELIX 20 20 LYS B 553 TRP B 557 5 5 SHEET 1 A 6 ARG A 254 TYR A 255 0 SHEET 2 A 6 LEU A 262 THR A 268 -1 O LEU A 262 N TYR A 255 SHEET 3 A 6 VAL A 271 MET A 274 -1 O ALA A 273 N THR A 265 SHEET 4 A 6 VAL A 358 HIS A 362 1 O ILE A 361 N ILE A 272 SHEET 5 A 6 PHE A 304 CYS A 310 1 N TYR A 307 O ALA A 360 SHEET 6 A 6 VAL A 324 ILE A 329 1 O VAL A 327 N ASN A 308 SHEET 1 B 2 PRO A 277 SER A 278 0 SHEET 2 B 2 ASN A 287 PRO A 288 1 O ASN A 287 N SER A 278 SHEET 1 C 5 CYS A 482 ASP A 487 0 SHEET 2 C 5 CYS A 492 VAL A 497 -1 O THR A 494 N GLN A 485 SHEET 3 C 5 LEU A 439 THR A 447 -1 N VAL A 444 O CYS A 495 SHEET 4 C 5 THR A 565 ASP A 572 -1 O LYS A 567 N THR A 445 SHEET 5 C 5 HIS A 540 LYS A 544 -1 N LEU A 543 O VAL A 566 SHEET 1 D 4 GLN A 469 LYS A 475 0 SHEET 2 D 4 LEU A 460 SER A 466 -1 N ILE A 464 O VAL A 471 SHEET 3 D 4 ASP A 506 SER A 513 -1 O LYS A 508 N VAL A 465 SHEET 4 D 4 PHE A 527 ASN A 532 -1 O PHE A 531 N ILE A 507 SHEET 1 E 6 ARG B 254 TYR B 255 0 SHEET 2 E 6 LEU B 262 THR B 268 -1 O LEU B 262 N TYR B 255 SHEET 3 E 6 VAL B 271 MET B 274 -1 O ALA B 273 N THR B 265 SHEET 4 E 6 VAL B 358 HIS B 362 1 O ILE B 361 N ILE B 272 SHEET 5 E 6 PHE B 304 CYS B 310 1 N TYR B 307 O ALA B 360 SHEET 6 E 6 VAL B 324 ILE B 329 1 O VAL B 327 N ASN B 308 SHEET 1 F 2 PRO B 277 SER B 278 0 SHEET 2 F 2 ASN B 287 PRO B 288 1 O ASN B 287 N SER B 278 SHEET 1 G 5 CYS B 482 ASP B 487 0 SHEET 2 G 5 CYS B 492 VAL B 497 -1 O THR B 494 N GLN B 485 SHEET 3 G 5 LEU B 439 THR B 447 -1 N VAL B 444 O CYS B 495 SHEET 4 G 5 THR B 565 ASP B 572 -1 O THR B 569 N THR B 442 SHEET 5 G 5 HIS B 540 LYS B 544 -1 N LEU B 543 O VAL B 566 SHEET 1 H 4 GLN B 469 LYS B 475 0 SHEET 2 H 4 LEU B 460 SER B 466 -1 N MET B 462 O CYS B 474 SHEET 3 H 4 ASP B 506 SER B 513 -1 O ARG B 510 N GLN B 463 SHEET 4 H 4 PHE B 527 ASN B 532 -1 O PHE B 531 N ILE B 507 SITE 1 AC1 10 HOH B 54 ASP B 331 SER B 363 LYS B 364 SITE 2 AC1 10 GLY B 365 GLY B 366 LYS B 367 GLY B 368 SITE 3 AC1 10 ARG B 369 GLU B 411 SITE 1 AC2 10 HOH A 6 ASP A 331 SER A 363 LYS A 364 SITE 2 AC2 10 GLY A 365 GLY A 366 LYS A 367 GLY A 368 SITE 3 AC2 10 ARG A 369 GLU A 411 CRYST1 50.562 76.804 84.007 90.00 92.73 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019778 0.000000 0.000943 0.00000 SCALE2 0.000000 0.013020 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011917 0.00000