HEADER OXIDOREDUCTASE 09-DEC-11 3V15 TITLE CRYSTAL STRUCTURE OF THE FE(II)/ALPHA-KETOGLUTARATE DEPENDENT TAURINE TITLE 2 DIOXYGENASE FROM PSEUDOMONAS PUTIDA KT2440 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-KETOGLUTARATE-DEPENDENT TAURINE DIOXYGENASE; COMPND 3 CHAIN: A, C, B, D; COMPND 4 EC: 1.14.11.17; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA; SOURCE 3 ORGANISM_TAXID: 160488; SOURCE 4 STRAIN: KT 2440; SOURCE 5 GENE: PP0230, PP_0230, TAUD; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET11A KEYWDS JELLY ROLL MOTIF, DIOXYGENASE, ALPHA-KETOGLUTARATE, FE(II), KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR S.H.KNAUER,H.DOBBEK REVDAT 3 13-SEP-23 3V15 1 REMARK REVDAT 2 26-JUN-13 3V15 1 JRNL REVDAT 1 18-JAN-12 3V15 0 JRNL AUTH S.H.KNAUER,O.HARTL-SPIEGELHAUER,S.SCHWARZINGER,P.HANZELMANN, JRNL AUTH 2 H.DOBBEK JRNL TITL THE FE(II) / ALPHA-KETOGLUTARATE DEPENDENT TAURINE JRNL TITL 2 DIOXYGENASES FROM PSEUDOMONAS PUTIDA AND ESCHERICHIA COLI JRNL TITL 3 ARE TETRAMERS JRNL REF FEBS J. V. 279 816 2012 JRNL REFN ISSN 1742-464X JRNL PMID 22221834 JRNL DOI 10.1111/J.1742-4658.2012.08473.X REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.1_357) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.78 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 44004 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2201 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.7819 - 5.5892 0.99 4352 230 0.1732 0.2143 REMARK 3 2 5.5892 - 4.4416 1.00 4232 222 0.1481 0.2392 REMARK 3 3 4.4416 - 3.8817 1.00 4188 221 0.1445 0.2005 REMARK 3 4 3.8817 - 3.5274 1.00 4205 221 0.1769 0.2476 REMARK 3 5 3.5274 - 3.2750 1.00 4148 218 0.1837 0.2701 REMARK 3 6 3.2750 - 3.0821 1.00 4158 219 0.1936 0.2810 REMARK 3 7 3.0821 - 2.9279 1.00 4156 219 0.2074 0.2851 REMARK 3 8 2.9279 - 2.8006 1.00 4129 217 0.2077 0.2866 REMARK 3 9 2.8006 - 2.6929 1.00 4110 217 0.2087 0.2731 REMARK 3 10 2.6929 - 2.6000 1.00 4125 217 0.2124 0.3105 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 51.58 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.850 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 15.87890 REMARK 3 B22 (A**2) : -6.01570 REMARK 3 B33 (A**2) : -9.86320 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 9004 REMARK 3 ANGLE : 1.158 12320 REMARK 3 CHIRALITY : 0.073 1378 REMARK 3 PLANARITY : 0.006 1638 REMARK 3 DIHEDRAL : 14.976 3268 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 4.9241 4.6092 -25.2766 REMARK 3 T TENSOR REMARK 3 T11: 0.0780 T22: 0.4573 REMARK 3 T33: 0.2655 T12: 0.0754 REMARK 3 T13: 0.0502 T23: -0.0826 REMARK 3 L TENSOR REMARK 3 L11: 1.2506 L22: 0.4987 REMARK 3 L33: 0.7331 L12: -0.5488 REMARK 3 L13: 0.3735 L23: -0.1718 REMARK 3 S TENSOR REMARK 3 S11: 0.1524 S12: 0.4742 S13: -0.0555 REMARK 3 S21: -0.1820 S22: -0.1980 S23: -0.0806 REMARK 3 S31: 0.2343 S32: 0.4729 S33: -0.0043 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): -25.2924 16.7435 -22.2030 REMARK 3 T TENSOR REMARK 3 T11: 0.0089 T22: 0.2188 REMARK 3 T33: 0.1644 T12: 0.0378 REMARK 3 T13: 0.0379 T23: -0.0089 REMARK 3 L TENSOR REMARK 3 L11: 0.2264 L22: 0.3735 REMARK 3 L33: 1.3998 L12: 0.0379 REMARK 3 L13: 0.3389 L23: -0.5282 REMARK 3 S TENSOR REMARK 3 S11: 0.0128 S12: -0.0754 S13: 0.0377 REMARK 3 S21: 0.0542 S22: 0.0804 S23: 0.0711 REMARK 3 S31: -0.0581 S32: -0.3127 S33: -0.0698 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): -14.6463 9.9243 22.2548 REMARK 3 T TENSOR REMARK 3 T11: 0.0032 T22: 0.1301 REMARK 3 T33: 0.2059 T12: -0.0273 REMARK 3 T13: 0.0820 T23: -0.0681 REMARK 3 L TENSOR REMARK 3 L11: 0.2137 L22: 1.2360 REMARK 3 L33: 1.2681 L12: 0.2815 REMARK 3 L13: -0.0850 L23: -0.7546 REMARK 3 S TENSOR REMARK 3 S11: 0.0921 S12: 0.0218 S13: 0.0882 REMARK 3 S21: 0.3352 S22: -0.0052 S23: 0.2166 REMARK 3 S31: -0.3006 S32: -0.1292 S33: -0.0663 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3V15 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-DEC-11. REMARK 100 THE DEPOSITION ID IS D_1000069463. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-NOV-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : OTHER REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : OSMIC MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44029 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08800 REMARK 200 FOR THE DATA SET : 18.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.59500 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 3PVJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: RESERVOIR SOLUTION: 20 % (W/V) PEG REMARK 280 5,000 MME, 0.1 M BIS TRIS/HCL (PH 6.5) PROTEIN SOLUTION: 21 MG/ REMARK 280 ML PROTEIN IN 25 MM TRIS/HCL (PH 7.7) CONTAINING 10 MM TAURINE, REMARK 280 0.1 (NH4)2SO4 AND 20 % (V/V) GLYCEROL, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.44450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 81.38550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.92500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 81.38550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.44450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 50.92500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 45310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 MET C 1 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 MET D 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 274 O HOH A 289 1.87 REMARK 500 O HOH C 357 O HOH C 359 1.87 REMARK 500 O HOH A 310 O HOH D 318 1.87 REMARK 500 O GLN D 167 O HOH D 321 1.89 REMARK 500 O THR C 189 O HOH C 278 2.01 REMARK 500 O HOH B 283 O HOH B 352 2.06 REMARK 500 O GLN D 79 O HOH D 286 2.06 REMARK 500 NH2 ARG A 61 O HOH A 327 2.07 REMARK 500 O HOH B 346 O HOH B 347 2.09 REMARK 500 OE1 GLN D 55 O HOH D 283 2.09 REMARK 500 O HOH A 291 O HOH B 287 2.11 REMARK 500 OE1 GLN C 252 O HOH C 318 2.14 REMARK 500 O HOH B 280 O HOH B 353 2.15 REMARK 500 O ASN B 179 O HOH B 329 2.15 REMARK 500 O LEU D 214 O HOH D 281 2.15 REMARK 500 O HOH A 321 O HOH C 294 2.18 REMARK 500 OD2 ASP C 99 O HOH C 292 2.18 REMARK 500 O HOH A 290 O HOH A 301 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 300 O HOH D 311 2454 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 158 C - N - CA ANGL. DEV. = 9.0 DEGREES REMARK 500 PRO A 158 C - N - CD ANGL. DEV. = -18.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 41 -39.67 77.55 REMARK 500 HIS A 68 -98.17 -88.04 REMARK 500 ILE A 70 37.23 79.30 REMARK 500 VAL A 90 58.79 -141.65 REMARK 500 ALA A 94 33.91 -85.54 REMARK 500 THR A 105 83.57 -150.30 REMARK 500 PHE A 157 -73.43 -138.50 REMARK 500 PRO A 158 7.38 31.44 REMARK 500 LEU A 159 5.00 84.87 REMARK 500 THR A 165 128.50 -32.25 REMARK 500 ALA C 27 -49.83 -28.01 REMARK 500 GLN C 41 -32.33 78.15 REMARK 500 PRO C 69 41.88 -97.18 REMARK 500 ILE C 70 -33.39 -134.48 REMARK 500 PRO C 72 95.21 -68.61 REMARK 500 PRO C 78 2.71 -65.41 REMARK 500 ASP C 89 -166.74 -107.13 REMARK 500 VAL C 90 17.76 -145.14 REMARK 500 LYS C 115 -110.36 -83.80 REMARK 500 VAL C 250 19.22 -145.34 REMARK 500 ASP C 258 16.06 -145.19 REMARK 500 GLN B 41 -33.98 77.02 REMARK 500 GLN B 48 69.80 -116.86 REMARK 500 HIS B 68 -114.84 42.25 REMARK 500 ILE B 70 62.75 -100.20 REMARK 500 ASP B 92 0.95 55.43 REMARK 500 LYS B 115 -61.55 -108.88 REMARK 500 SER B 137 153.29 -48.60 REMARK 500 PHE B 157 59.86 -112.46 REMARK 500 PRO B 158 178.31 -56.93 REMARK 500 ASP B 258 10.57 -141.55 REMARK 500 GLN D 41 -34.34 66.78 REMARK 500 ARG D 61 0.56 -66.82 REMARK 500 TYR D 71 169.54 80.62 REMARK 500 VAL D 87 -90.81 -107.10 REMARK 500 THR D 88 -176.01 -50.89 REMARK 500 VAL D 90 54.25 -140.54 REMARK 500 LEU D 159 -103.81 47.58 REMARK 500 PRO D 185 152.93 -48.62 REMARK 500 VAL D 250 26.78 -140.40 REMARK 500 ASP D 274 -141.06 -100.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 HIS B 68 PRO B 69 -146.75 REMARK 500 HIS D 97 THR D 98 149.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3PVJ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE FE(II)/ALPHA-KETOGLUTARATE DEPENDENT REMARK 900 TAURINE DIOXYGENASE FROM PSEUDOMONAS PUTIDA KT2440 REMARK 900 RELATED ID: 3V17 RELATED DB: PDB DBREF 3V15 A 1 277 UNP Q88RA3 Q88RA3_PSEPK 1 277 DBREF 3V15 C 1 277 UNP Q88RA3 Q88RA3_PSEPK 1 277 DBREF 3V15 B 1 277 UNP Q88RA3 Q88RA3_PSEPK 1 277 DBREF 3V15 D 1 277 UNP Q88RA3 Q88RA3_PSEPK 1 277 SEQRES 1 A 277 MET SER LEU THR ILE THR PRO LEU SER PRO ALA LEU GLY SEQRES 2 A 277 ALA GLN ILE SER GLY VAL ASP ILE SER ARG ASP ILE SER SEQRES 3 A 277 ALA GLU GLU ARG ASP ALA ILE GLU GLN ALA LEU LEU GLN SEQRES 4 A 277 HIS GLN VAL LEU PHE LEU ARG ASP GLN PRO ILE ASN PRO SEQRES 5 A 277 GLU GLN GLN ALA ARG PHE ALA ALA ARG PHE GLY ASP LEU SEQRES 6 A 277 HIS ILE HIS PRO ILE TYR PRO ASN VAL PRO ASP THR PRO SEQRES 7 A 277 GLN VAL LEU VAL LEU ASP THR ALA VAL THR ASP VAL ARG SEQRES 8 A 277 ASP ASN ALA VAL TRP HIS THR ASP VAL THR PHE LEU PRO SEQRES 9 A 277 THR PRO ALA LEU GLY ALA VAL LEU SER ALA LYS GLN LEU SEQRES 10 A 277 PRO ALA TYR GLY GLY ASP THR LEU TRP ALA SER GLY ILE SEQRES 11 A 277 ALA ALA PHE GLU ALA LEU SER ALA PRO LEU ARG GLU MET SEQRES 12 A 277 LEU ASP GLY LEU THR ALA THR HIS ASP PHE THR LYS SER SEQRES 13 A 277 PHE PRO LEU GLU ARG PHE GLY THR THR PRO GLN ASP LEU SEQRES 14 A 277 ALA ARG TRP GLU ALA THR ARG ARG ASN ASN PRO PRO LEU SEQRES 15 A 277 SER HIS PRO VAL VAL ARG THR HIS PRO VAL SER GLY ARG SEQRES 16 A 277 LYS ALA LEU PHE VAL ASN GLU GLY PHE THR THR ARG ILE SEQRES 17 A 277 ASN GLU LEU SER GLU LEU GLU SER ASP ALA LEU LEU ARG SEQRES 18 A 277 LEU LEU PHE ALA HIS ALA THR ARG PRO GLU PHE SER ILE SEQRES 19 A 277 ARG TRP ARG TRP GLN GLU ASN ASP VAL ALA PHE TRP ASP SEQRES 20 A 277 ASN ARG VAL THR GLN HIS PHE ALA VAL ASP ASP TYR ARG SEQRES 21 A 277 PRO ASN ARG ARG VAL MET HIS ARG ALA THR ILE LEU GLY SEQRES 22 A 277 ASP ALA PRO PHE SEQRES 1 C 277 MET SER LEU THR ILE THR PRO LEU SER PRO ALA LEU GLY SEQRES 2 C 277 ALA GLN ILE SER GLY VAL ASP ILE SER ARG ASP ILE SER SEQRES 3 C 277 ALA GLU GLU ARG ASP ALA ILE GLU GLN ALA LEU LEU GLN SEQRES 4 C 277 HIS GLN VAL LEU PHE LEU ARG ASP GLN PRO ILE ASN PRO SEQRES 5 C 277 GLU GLN GLN ALA ARG PHE ALA ALA ARG PHE GLY ASP LEU SEQRES 6 C 277 HIS ILE HIS PRO ILE TYR PRO ASN VAL PRO ASP THR PRO SEQRES 7 C 277 GLN VAL LEU VAL LEU ASP THR ALA VAL THR ASP VAL ARG SEQRES 8 C 277 ASP ASN ALA VAL TRP HIS THR ASP VAL THR PHE LEU PRO SEQRES 9 C 277 THR PRO ALA LEU GLY ALA VAL LEU SER ALA LYS GLN LEU SEQRES 10 C 277 PRO ALA TYR GLY GLY ASP THR LEU TRP ALA SER GLY ILE SEQRES 11 C 277 ALA ALA PHE GLU ALA LEU SER ALA PRO LEU ARG GLU MET SEQRES 12 C 277 LEU ASP GLY LEU THR ALA THR HIS ASP PHE THR LYS SER SEQRES 13 C 277 PHE PRO LEU GLU ARG PHE GLY THR THR PRO GLN ASP LEU SEQRES 14 C 277 ALA ARG TRP GLU ALA THR ARG ARG ASN ASN PRO PRO LEU SEQRES 15 C 277 SER HIS PRO VAL VAL ARG THR HIS PRO VAL SER GLY ARG SEQRES 16 C 277 LYS ALA LEU PHE VAL ASN GLU GLY PHE THR THR ARG ILE SEQRES 17 C 277 ASN GLU LEU SER GLU LEU GLU SER ASP ALA LEU LEU ARG SEQRES 18 C 277 LEU LEU PHE ALA HIS ALA THR ARG PRO GLU PHE SER ILE SEQRES 19 C 277 ARG TRP ARG TRP GLN GLU ASN ASP VAL ALA PHE TRP ASP SEQRES 20 C 277 ASN ARG VAL THR GLN HIS PHE ALA VAL ASP ASP TYR ARG SEQRES 21 C 277 PRO ASN ARG ARG VAL MET HIS ARG ALA THR ILE LEU GLY SEQRES 22 C 277 ASP ALA PRO PHE SEQRES 1 B 277 MET SER LEU THR ILE THR PRO LEU SER PRO ALA LEU GLY SEQRES 2 B 277 ALA GLN ILE SER GLY VAL ASP ILE SER ARG ASP ILE SER SEQRES 3 B 277 ALA GLU GLU ARG ASP ALA ILE GLU GLN ALA LEU LEU GLN SEQRES 4 B 277 HIS GLN VAL LEU PHE LEU ARG ASP GLN PRO ILE ASN PRO SEQRES 5 B 277 GLU GLN GLN ALA ARG PHE ALA ALA ARG PHE GLY ASP LEU SEQRES 6 B 277 HIS ILE HIS PRO ILE TYR PRO ASN VAL PRO ASP THR PRO SEQRES 7 B 277 GLN VAL LEU VAL LEU ASP THR ALA VAL THR ASP VAL ARG SEQRES 8 B 277 ASP ASN ALA VAL TRP HIS THR ASP VAL THR PHE LEU PRO SEQRES 9 B 277 THR PRO ALA LEU GLY ALA VAL LEU SER ALA LYS GLN LEU SEQRES 10 B 277 PRO ALA TYR GLY GLY ASP THR LEU TRP ALA SER GLY ILE SEQRES 11 B 277 ALA ALA PHE GLU ALA LEU SER ALA PRO LEU ARG GLU MET SEQRES 12 B 277 LEU ASP GLY LEU THR ALA THR HIS ASP PHE THR LYS SER SEQRES 13 B 277 PHE PRO LEU GLU ARG PHE GLY THR THR PRO GLN ASP LEU SEQRES 14 B 277 ALA ARG TRP GLU ALA THR ARG ARG ASN ASN PRO PRO LEU SEQRES 15 B 277 SER HIS PRO VAL VAL ARG THR HIS PRO VAL SER GLY ARG SEQRES 16 B 277 LYS ALA LEU PHE VAL ASN GLU GLY PHE THR THR ARG ILE SEQRES 17 B 277 ASN GLU LEU SER GLU LEU GLU SER ASP ALA LEU LEU ARG SEQRES 18 B 277 LEU LEU PHE ALA HIS ALA THR ARG PRO GLU PHE SER ILE SEQRES 19 B 277 ARG TRP ARG TRP GLN GLU ASN ASP VAL ALA PHE TRP ASP SEQRES 20 B 277 ASN ARG VAL THR GLN HIS PHE ALA VAL ASP ASP TYR ARG SEQRES 21 B 277 PRO ASN ARG ARG VAL MET HIS ARG ALA THR ILE LEU GLY SEQRES 22 B 277 ASP ALA PRO PHE SEQRES 1 D 277 MET SER LEU THR ILE THR PRO LEU SER PRO ALA LEU GLY SEQRES 2 D 277 ALA GLN ILE SER GLY VAL ASP ILE SER ARG ASP ILE SER SEQRES 3 D 277 ALA GLU GLU ARG ASP ALA ILE GLU GLN ALA LEU LEU GLN SEQRES 4 D 277 HIS GLN VAL LEU PHE LEU ARG ASP GLN PRO ILE ASN PRO SEQRES 5 D 277 GLU GLN GLN ALA ARG PHE ALA ALA ARG PHE GLY ASP LEU SEQRES 6 D 277 HIS ILE HIS PRO ILE TYR PRO ASN VAL PRO ASP THR PRO SEQRES 7 D 277 GLN VAL LEU VAL LEU ASP THR ALA VAL THR ASP VAL ARG SEQRES 8 D 277 ASP ASN ALA VAL TRP HIS THR ASP VAL THR PHE LEU PRO SEQRES 9 D 277 THR PRO ALA LEU GLY ALA VAL LEU SER ALA LYS GLN LEU SEQRES 10 D 277 PRO ALA TYR GLY GLY ASP THR LEU TRP ALA SER GLY ILE SEQRES 11 D 277 ALA ALA PHE GLU ALA LEU SER ALA PRO LEU ARG GLU MET SEQRES 12 D 277 LEU ASP GLY LEU THR ALA THR HIS ASP PHE THR LYS SER SEQRES 13 D 277 PHE PRO LEU GLU ARG PHE GLY THR THR PRO GLN ASP LEU SEQRES 14 D 277 ALA ARG TRP GLU ALA THR ARG ARG ASN ASN PRO PRO LEU SEQRES 15 D 277 SER HIS PRO VAL VAL ARG THR HIS PRO VAL SER GLY ARG SEQRES 16 D 277 LYS ALA LEU PHE VAL ASN GLU GLY PHE THR THR ARG ILE SEQRES 17 D 277 ASN GLU LEU SER GLU LEU GLU SER ASP ALA LEU LEU ARG SEQRES 18 D 277 LEU LEU PHE ALA HIS ALA THR ARG PRO GLU PHE SER ILE SEQRES 19 D 277 ARG TRP ARG TRP GLN GLU ASN ASP VAL ALA PHE TRP ASP SEQRES 20 D 277 ASN ARG VAL THR GLN HIS PHE ALA VAL ASP ASP TYR ARG SEQRES 21 D 277 PRO ASN ARG ARG VAL MET HIS ARG ALA THR ILE LEU GLY SEQRES 22 D 277 ASP ALA PRO PHE FORMUL 5 HOH *284(H2 O) HELIX 1 1 SER A 26 GLN A 41 1 16 HELIX 2 2 ASN A 51 ARG A 61 1 11 HELIX 3 3 GLY A 129 LEU A 136 1 8 HELIX 4 4 SER A 137 ASP A 145 1 9 HELIX 5 5 PHE A 153 SER A 156 5 4 HELIX 6 6 PHE A 157 PHE A 162 5 6 HELIX 7 7 LEU A 169 ASN A 179 1 11 HELIX 8 8 SER A 212 ALA A 227 1 16 HELIX 9 9 THR A 228 GLU A 231 5 4 HELIX 10 10 SER C 26 GLN C 41 1 16 HELIX 11 11 ASN C 51 ARG C 61 1 11 HELIX 12 12 VAL C 90 VAL C 95 5 6 HELIX 13 13 GLY C 129 LEU C 136 1 8 HELIX 14 14 SER C 137 ASP C 145 1 9 HELIX 15 15 PHE C 153 SER C 156 5 4 HELIX 16 16 PRO C 158 GLY C 163 1 6 HELIX 17 17 THR C 165 ASN C 179 1 15 HELIX 18 18 SER C 212 THR C 228 1 17 HELIX 19 19 ARG C 229 GLU C 231 5 3 HELIX 20 20 SER B 26 GLN B 41 1 16 HELIX 21 21 ASN B 51 ALA B 60 1 10 HELIX 22 22 ARG B 61 GLY B 63 5 3 HELIX 23 23 GLY B 129 ALA B 135 1 7 HELIX 24 24 SER B 137 ASP B 145 1 9 HELIX 25 25 PHE B 153 SER B 156 5 4 HELIX 26 26 PRO B 158 PHE B 162 5 5 HELIX 27 27 THR B 165 ASN B 179 1 15 HELIX 28 28 SER B 212 THR B 228 1 17 HELIX 29 29 ARG B 229 GLU B 231 5 3 HELIX 30 30 SER D 26 GLN D 41 1 16 HELIX 31 31 ASN D 51 ARG D 61 1 11 HELIX 32 32 GLY D 129 LEU D 136 1 8 HELIX 33 33 SER D 137 ASP D 145 1 9 HELIX 34 34 PHE D 153 PHE D 157 5 5 HELIX 35 35 LEU D 169 ASN D 179 1 11 HELIX 36 36 SER D 212 THR D 228 1 17 HELIX 37 37 ARG D 229 GLU D 231 5 3 SHEET 1 A 7 THR A 4 PRO A 7 0 SHEET 2 A 7 ALA A 14 SER A 17 -1 O SER A 17 N THR A 4 SHEET 3 A 7 VAL A 42 LEU A 45 1 O PHE A 44 N ILE A 16 SHEET 4 A 7 VAL A 243 ASP A 247 -1 O PHE A 245 N LEU A 43 SHEET 5 A 7 GLY A 109 GLN A 116 -1 N LEU A 112 O ALA A 244 SHEET 6 A 7 VAL A 265 ILE A 271 -1 O ILE A 271 N GLY A 109 SHEET 7 A 7 LEU A 81 ASP A 84 -1 N LEU A 81 O ARG A 268 SHEET 1 B 3 SER A 233 TRP A 236 0 SHEET 2 B 3 THR A 124 SER A 128 -1 N THR A 124 O TRP A 236 SHEET 3 B 3 THR A 251 ALA A 255 -1 O PHE A 254 N LEU A 125 SHEET 1 C 3 LEU A 182 PRO A 185 0 SHEET 2 C 3 THR A 148 HIS A 151 -1 N ALA A 149 O HIS A 184 SHEET 3 C 3 THR A 205 ILE A 208 -1 O ARG A 207 N THR A 150 SHEET 1 D 2 VAL A 187 THR A 189 0 SHEET 2 D 2 LYS A 196 LEU A 198 -1 O ALA A 197 N ARG A 188 SHEET 1 E 7 THR C 4 PRO C 7 0 SHEET 2 E 7 ALA C 14 SER C 17 -1 O GLN C 15 N THR C 6 SHEET 3 E 7 VAL C 42 LEU C 45 1 O PHE C 44 N ILE C 16 SHEET 4 E 7 VAL C 243 ASP C 247 -1 O VAL C 243 N LEU C 45 SHEET 5 E 7 GLY C 109 ALA C 114 -1 N LEU C 112 O ALA C 244 SHEET 6 E 7 VAL C 265 ILE C 271 -1 O HIS C 267 N SER C 113 SHEET 7 E 7 VAL C 80 ASP C 84 -1 N LEU C 83 O MET C 266 SHEET 1 F 3 SER C 233 TRP C 236 0 SHEET 2 F 3 THR C 124 SER C 128 -1 N THR C 124 O TRP C 236 SHEET 3 F 3 THR C 251 ALA C 255 -1 O PHE C 254 N LEU C 125 SHEET 1 G 3 LEU C 182 PRO C 185 0 SHEET 2 G 3 THR C 148 HIS C 151 -1 N HIS C 151 O LEU C 182 SHEET 3 G 3 THR C 205 ILE C 208 -1 O ARG C 207 N THR C 150 SHEET 1 H 2 VAL C 187 THR C 189 0 SHEET 2 H 2 LYS C 196 LEU C 198 -1 O ALA C 197 N ARG C 188 SHEET 1 I 7 THR B 4 PRO B 7 0 SHEET 2 I 7 ALA B 14 SER B 17 -1 O SER B 17 N THR B 4 SHEET 3 I 7 VAL B 42 LEU B 45 1 O PHE B 44 N ILE B 16 SHEET 4 I 7 VAL B 243 ASP B 247 -1 O PHE B 245 N LEU B 43 SHEET 5 I 7 GLY B 109 GLN B 116 -1 N LEU B 112 O ALA B 244 SHEET 6 I 7 VAL B 265 ILE B 271 -1 O ILE B 271 N GLY B 109 SHEET 7 I 7 LEU B 81 ASP B 84 -1 N LEU B 81 O ARG B 268 SHEET 1 J 3 SER B 233 TRP B 236 0 SHEET 2 J 3 THR B 124 SER B 128 -1 N THR B 124 O TRP B 236 SHEET 3 J 3 THR B 251 ALA B 255 -1 O PHE B 254 N LEU B 125 SHEET 1 K 3 LEU B 182 PRO B 185 0 SHEET 2 K 3 THR B 148 HIS B 151 -1 N HIS B 151 O LEU B 182 SHEET 3 K 3 THR B 205 ILE B 208 -1 O THR B 206 N THR B 150 SHEET 1 L 2 VAL B 187 THR B 189 0 SHEET 2 L 2 LYS B 196 LEU B 198 -1 O ALA B 197 N ARG B 188 SHEET 1 M 7 THR D 4 PRO D 7 0 SHEET 2 M 7 ALA D 14 SER D 17 -1 O SER D 17 N THR D 4 SHEET 3 M 7 VAL D 42 LEU D 45 1 O PHE D 44 N ILE D 16 SHEET 4 M 7 VAL D 243 ASP D 247 -1 O PHE D 245 N LEU D 43 SHEET 5 M 7 GLY D 109 GLN D 116 -1 N LEU D 112 O ALA D 244 SHEET 6 M 7 VAL D 265 ILE D 271 -1 O HIS D 267 N SER D 113 SHEET 7 M 7 LEU D 81 ASP D 84 -1 N LEU D 81 O ARG D 268 SHEET 1 N 3 SER D 233 TRP D 236 0 SHEET 2 N 3 THR D 124 SER D 128 -1 N THR D 124 O TRP D 236 SHEET 3 N 3 THR D 251 ALA D 255 -1 O PHE D 254 N LEU D 125 SHEET 1 O 3 LEU D 182 PRO D 185 0 SHEET 2 O 3 THR D 148 HIS D 151 -1 N HIS D 151 O LEU D 182 SHEET 3 O 3 THR D 205 ILE D 208 -1 O ARG D 207 N THR D 150 SHEET 1 P 2 VAL D 187 THR D 189 0 SHEET 2 P 2 LYS D 196 LEU D 198 -1 O ALA D 197 N ARG D 188 CISPEP 1 HIS A 68 PRO A 69 0 -10.54 CISPEP 2 GLY A 163 THR A 164 0 17.74 CISPEP 3 ARG A 260 PRO A 261 0 4.14 CISPEP 4 ARG C 260 PRO C 261 0 6.34 CISPEP 5 PRO B 69 ILE B 70 0 -2.76 CISPEP 6 ARG B 260 PRO B 261 0 6.70 CISPEP 7 ARG D 260 PRO D 261 0 0.88 CRYST1 84.889 101.850 162.771 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011780 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009818 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006144 0.00000