HEADER OXIDOREDUCTASE 09-DEC-11 3V17 TITLE CRYSTAL STRUCTURE OF THE FE(II)/ALPHA-KETOGLUTARATE DEPENDENT TAURINE TITLE 2 DIOXYGENASE FROM PSEUDOMONAS PUTIDA KT2440 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-KETOGLUTARATE-DEPENDENT TAURINE DIOXYGENASE; COMPND 3 CHAIN: A, C, B, D; COMPND 4 EC: 1.14.11.17; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA; SOURCE 3 ORGANISM_TAXID: 160488; SOURCE 4 STRAIN: KT2440; SOURCE 5 GENE: PP0230, PP_0230, TAUD; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET11A KEYWDS JELLY ROLL MOTIF, DIOXYGENASE, FE(II), ALPHA-KETOGLUTARATE, TAURINE, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR S.H.KNAUER,H.DOBBEK REVDAT 3 13-SEP-23 3V17 1 REMARK REVDAT 2 26-JUN-13 3V17 1 JRNL REVDAT 1 18-JAN-12 3V17 0 JRNL AUTH S.H.KNAUER,O.HARTL-SPIEGELHAUER,S.SCHWARZINGER,P.HANZELMANN, JRNL AUTH 2 H.DOBBEK JRNL TITL THE FE(II) / ALPHA-KETOGLUTARATE DEPENDENT TAURINE JRNL TITL 2 DIOXYGENASES FROM PSEUDOMONAS PUTIDA AND ESCHERICHIA COLI JRNL TITL 3 ARE TETRAMERS JRNL REF FEBS J. V. 279 816 2012 JRNL REFN ISSN 1742-464X JRNL PMID 22221834 JRNL DOI 10.1111/J.1742-4658.2012.08473.X REMARK 2 REMARK 2 RESOLUTION. 2.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.1_357) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 50270 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2514 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.4838 - 5.5295 0.99 4991 264 0.1705 0.2038 REMARK 3 2 5.5295 - 4.3921 1.00 4842 254 0.1389 0.1688 REMARK 3 3 4.3921 - 3.8378 1.00 4796 253 0.1451 0.1874 REMARK 3 4 3.8378 - 3.4873 1.00 4749 250 0.1744 0.2202 REMARK 3 5 3.4873 - 3.2376 1.00 4755 250 0.1799 0.2455 REMARK 3 6 3.2376 - 3.0468 1.00 4749 250 0.1957 0.2521 REMARK 3 7 3.0468 - 2.8943 1.00 4720 249 0.1956 0.2519 REMARK 3 8 2.8943 - 2.7684 1.00 4731 248 0.1990 0.2740 REMARK 3 9 2.7684 - 2.6619 1.00 4718 249 0.1957 0.2800 REMARK 3 10 2.6619 - 2.5700 1.00 4705 247 0.2084 0.2556 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 34.64 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.34370 REMARK 3 B22 (A**2) : -3.34370 REMARK 3 B33 (A**2) : 6.68750 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 9052 REMARK 3 ANGLE : 0.729 12380 REMARK 3 CHIRALITY : 0.051 1380 REMARK 3 PLANARITY : 0.005 1652 REMARK 3 DIHEDRAL : 12.395 3308 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): -44.3411 26.2369 25.8048 REMARK 3 T TENSOR REMARK 3 T11: 0.1412 T22: 0.1370 REMARK 3 T33: 0.0779 T12: 0.0199 REMARK 3 T13: -0.0117 T23: -0.0422 REMARK 3 L TENSOR REMARK 3 L11: 0.7265 L22: 1.7320 REMARK 3 L33: 0.6824 L12: 0.3189 REMARK 3 L13: -0.0936 L23: -0.6035 REMARK 3 S TENSOR REMARK 3 S11: -0.0252 S12: -0.0583 S13: -0.0260 REMARK 3 S21: 0.2536 S22: 0.0149 S23: -0.1528 REMARK 3 S31: -0.0871 S32: -0.0825 S33: 0.0116 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): -39.8010 71.0978 25.7441 REMARK 3 T TENSOR REMARK 3 T11: 0.1503 T22: 0.1458 REMARK 3 T33: 0.1669 T12: 0.0196 REMARK 3 T13: -0.0640 T23: -0.0771 REMARK 3 L TENSOR REMARK 3 L11: 0.8448 L22: 0.9573 REMARK 3 L33: 0.8453 L12: 0.2929 REMARK 3 L13: 0.0570 L23: 0.1423 REMARK 3 S TENSOR REMARK 3 S11: -0.0103 S12: 0.0067 S13: 0.0849 REMARK 3 S21: 0.1166 S22: 0.0319 S23: -0.0925 REMARK 3 S31: -0.0971 S32: -0.0119 S33: -0.0074 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): -46.8449 66.4619 -5.9150 REMARK 3 T TENSOR REMARK 3 T11: 0.0872 T22: 0.1607 REMARK 3 T33: 0.1259 T12: 0.0230 REMARK 3 T13: 0.0165 T23: -0.0154 REMARK 3 L TENSOR REMARK 3 L11: 0.4957 L22: 1.5423 REMARK 3 L33: 0.8702 L12: -0.1099 REMARK 3 L13: -0.0709 L23: -0.4164 REMARK 3 S TENSOR REMARK 3 S11: -0.0535 S12: 0.0670 S13: 0.0589 REMARK 3 S21: -0.0417 S22: 0.0928 S23: 0.0556 REMARK 3 S31: 0.0196 S32: -0.1567 S33: -0.0313 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D REMARK 3 ORIGIN FOR THE GROUP (A): -72.8951 33.9604 12.0661 REMARK 3 T TENSOR REMARK 3 T11: 0.1316 T22: 0.2658 REMARK 3 T33: 0.1772 T12: -0.0317 REMARK 3 T13: 0.0096 T23: -0.0664 REMARK 3 L TENSOR REMARK 3 L11: 0.7247 L22: 1.0577 REMARK 3 L33: 0.4012 L12: 0.6138 REMARK 3 L13: -0.0038 L23: 0.0225 REMARK 3 S TENSOR REMARK 3 S11: -0.1760 S12: 0.1594 S13: 0.0146 REMARK 3 S21: -0.0973 S22: 0.1219 S23: 0.1697 REMARK 3 S31: 0.0511 S32: -0.1145 S33: 0.0430 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3V17 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-DEC-11. REMARK 100 THE DEPOSITION ID IS D_1000069465. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91841 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR, SI REMARK 200 -111 CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50975 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.570 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08400 REMARK 200 FOR THE DATA SET : 17.1700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.48600 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3PVJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: RESERVOIR SOLUTION: 15 % (W/V) PEG REMARK 280 1,000, 40 % (V/V) PEG 400, 0.15 M NAK PHOSPHATE, 0.1 M IMIDAZOLE REMARK 280 CHLORIDE PROTEIN SOLUTION: 27 MG/ML PROTEIN IN 25 MM TRIS/HCL REMARK 280 (PH 7.7) DROP SET UP: 0.3 L + 0.3 L, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 289K, PH 6.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 142.67867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 71.33933 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 71.33933 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 142.67867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 44580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET C 1 REMARK 465 MET B 1 REMARK 465 MET D 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 41 -33.70 74.35 REMARK 500 PRO A 72 100.57 -46.98 REMARK 500 VAL A 100 44.66 39.90 REMARK 500 LYS A 115 -62.88 -91.23 REMARK 500 VAL A 250 20.10 -143.58 REMARK 500 GLN C 41 -40.52 76.50 REMARK 500 PRO C 72 104.40 -36.48 REMARK 500 VAL C 100 50.51 34.07 REMARK 500 ASP C 145 99.61 -66.26 REMARK 500 THR C 164 -31.99 -143.66 REMARK 500 ASN C 241 8.78 80.45 REMARK 500 VAL C 250 17.88 -142.37 REMARK 500 GLN B 41 -35.86 76.37 REMARK 500 VAL B 100 51.29 37.15 REMARK 500 GLU B 160 23.47 -72.88 REMARK 500 THR B 165 108.15 -45.31 REMARK 500 ASN B 241 10.51 81.56 REMARK 500 VAL B 250 11.64 -143.15 REMARK 500 ASP B 274 -168.72 -104.86 REMARK 500 GLN D 41 -33.66 73.76 REMARK 500 VAL D 100 49.34 39.12 REMARK 500 PHE D 157 68.92 -119.72 REMARK 500 PRO D 166 -9.03 -59.71 REMARK 500 VAL D 250 13.18 -144.38 REMARK 500 ASP D 257 75.25 -105.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AKG A 279 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AKG C 279 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AKG B 279 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AKG D 279 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3PVJ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE FE(II)/ALPHA-KETOGLUTARATE DEPENDENT REMARK 900 TAURINE DIOXYGENASE FROM PSEUDOMONAS PUTIDA KT2440 REMARK 900 RELATED ID: 3V15 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE FE(II)/ALPHA-KETOGLUTARATE DEPENDENT REMARK 900 TAURINE DIOXYGENASE FROM PSEUDOMONAS PUTIDA KT2440 DBREF 3V17 A 1 277 UNP Q88RA3 Q88RA3_PSEPK 1 277 DBREF 3V17 C 1 277 UNP Q88RA3 Q88RA3_PSEPK 1 277 DBREF 3V17 B 1 277 UNP Q88RA3 Q88RA3_PSEPK 1 277 DBREF 3V17 D 1 277 UNP Q88RA3 Q88RA3_PSEPK 1 277 SEQRES 1 A 277 MET SER LEU THR ILE THR PRO LEU SER PRO ALA LEU GLY SEQRES 2 A 277 ALA GLN ILE SER GLY VAL ASP ILE SER ARG ASP ILE SER SEQRES 3 A 277 ALA GLU GLU ARG ASP ALA ILE GLU GLN ALA LEU LEU GLN SEQRES 4 A 277 HIS GLN VAL LEU PHE LEU ARG ASP GLN PRO ILE ASN PRO SEQRES 5 A 277 GLU GLN GLN ALA ARG PHE ALA ALA ARG PHE GLY ASP LEU SEQRES 6 A 277 HIS ILE HIS PRO ILE TYR PRO ASN VAL PRO ASP THR PRO SEQRES 7 A 277 GLN VAL LEU VAL LEU ASP THR ALA VAL THR ASP VAL ARG SEQRES 8 A 277 ASP ASN ALA VAL TRP HIS THR ASP VAL THR PHE LEU PRO SEQRES 9 A 277 THR PRO ALA LEU GLY ALA VAL LEU SER ALA LYS GLN LEU SEQRES 10 A 277 PRO ALA TYR GLY GLY ASP THR LEU TRP ALA SER GLY ILE SEQRES 11 A 277 ALA ALA PHE GLU ALA LEU SER ALA PRO LEU ARG GLU MET SEQRES 12 A 277 LEU ASP GLY LEU THR ALA THR HIS ASP PHE THR LYS SER SEQRES 13 A 277 PHE PRO LEU GLU ARG PHE GLY THR THR PRO GLN ASP LEU SEQRES 14 A 277 ALA ARG TRP GLU ALA THR ARG ARG ASN ASN PRO PRO LEU SEQRES 15 A 277 SER HIS PRO VAL VAL ARG THR HIS PRO VAL SER GLY ARG SEQRES 16 A 277 LYS ALA LEU PHE VAL ASN GLU GLY PHE THR THR ARG ILE SEQRES 17 A 277 ASN GLU LEU SER GLU LEU GLU SER ASP ALA LEU LEU ARG SEQRES 18 A 277 LEU LEU PHE ALA HIS ALA THR ARG PRO GLU PHE SER ILE SEQRES 19 A 277 ARG TRP ARG TRP GLN GLU ASN ASP VAL ALA PHE TRP ASP SEQRES 20 A 277 ASN ARG VAL THR GLN HIS PHE ALA VAL ASP ASP TYR ARG SEQRES 21 A 277 PRO ASN ARG ARG VAL MET HIS ARG ALA THR ILE LEU GLY SEQRES 22 A 277 ASP ALA PRO PHE SEQRES 1 C 277 MET SER LEU THR ILE THR PRO LEU SER PRO ALA LEU GLY SEQRES 2 C 277 ALA GLN ILE SER GLY VAL ASP ILE SER ARG ASP ILE SER SEQRES 3 C 277 ALA GLU GLU ARG ASP ALA ILE GLU GLN ALA LEU LEU GLN SEQRES 4 C 277 HIS GLN VAL LEU PHE LEU ARG ASP GLN PRO ILE ASN PRO SEQRES 5 C 277 GLU GLN GLN ALA ARG PHE ALA ALA ARG PHE GLY ASP LEU SEQRES 6 C 277 HIS ILE HIS PRO ILE TYR PRO ASN VAL PRO ASP THR PRO SEQRES 7 C 277 GLN VAL LEU VAL LEU ASP THR ALA VAL THR ASP VAL ARG SEQRES 8 C 277 ASP ASN ALA VAL TRP HIS THR ASP VAL THR PHE LEU PRO SEQRES 9 C 277 THR PRO ALA LEU GLY ALA VAL LEU SER ALA LYS GLN LEU SEQRES 10 C 277 PRO ALA TYR GLY GLY ASP THR LEU TRP ALA SER GLY ILE SEQRES 11 C 277 ALA ALA PHE GLU ALA LEU SER ALA PRO LEU ARG GLU MET SEQRES 12 C 277 LEU ASP GLY LEU THR ALA THR HIS ASP PHE THR LYS SER SEQRES 13 C 277 PHE PRO LEU GLU ARG PHE GLY THR THR PRO GLN ASP LEU SEQRES 14 C 277 ALA ARG TRP GLU ALA THR ARG ARG ASN ASN PRO PRO LEU SEQRES 15 C 277 SER HIS PRO VAL VAL ARG THR HIS PRO VAL SER GLY ARG SEQRES 16 C 277 LYS ALA LEU PHE VAL ASN GLU GLY PHE THR THR ARG ILE SEQRES 17 C 277 ASN GLU LEU SER GLU LEU GLU SER ASP ALA LEU LEU ARG SEQRES 18 C 277 LEU LEU PHE ALA HIS ALA THR ARG PRO GLU PHE SER ILE SEQRES 19 C 277 ARG TRP ARG TRP GLN GLU ASN ASP VAL ALA PHE TRP ASP SEQRES 20 C 277 ASN ARG VAL THR GLN HIS PHE ALA VAL ASP ASP TYR ARG SEQRES 21 C 277 PRO ASN ARG ARG VAL MET HIS ARG ALA THR ILE LEU GLY SEQRES 22 C 277 ASP ALA PRO PHE SEQRES 1 B 277 MET SER LEU THR ILE THR PRO LEU SER PRO ALA LEU GLY SEQRES 2 B 277 ALA GLN ILE SER GLY VAL ASP ILE SER ARG ASP ILE SER SEQRES 3 B 277 ALA GLU GLU ARG ASP ALA ILE GLU GLN ALA LEU LEU GLN SEQRES 4 B 277 HIS GLN VAL LEU PHE LEU ARG ASP GLN PRO ILE ASN PRO SEQRES 5 B 277 GLU GLN GLN ALA ARG PHE ALA ALA ARG PHE GLY ASP LEU SEQRES 6 B 277 HIS ILE HIS PRO ILE TYR PRO ASN VAL PRO ASP THR PRO SEQRES 7 B 277 GLN VAL LEU VAL LEU ASP THR ALA VAL THR ASP VAL ARG SEQRES 8 B 277 ASP ASN ALA VAL TRP HIS THR ASP VAL THR PHE LEU PRO SEQRES 9 B 277 THR PRO ALA LEU GLY ALA VAL LEU SER ALA LYS GLN LEU SEQRES 10 B 277 PRO ALA TYR GLY GLY ASP THR LEU TRP ALA SER GLY ILE SEQRES 11 B 277 ALA ALA PHE GLU ALA LEU SER ALA PRO LEU ARG GLU MET SEQRES 12 B 277 LEU ASP GLY LEU THR ALA THR HIS ASP PHE THR LYS SER SEQRES 13 B 277 PHE PRO LEU GLU ARG PHE GLY THR THR PRO GLN ASP LEU SEQRES 14 B 277 ALA ARG TRP GLU ALA THR ARG ARG ASN ASN PRO PRO LEU SEQRES 15 B 277 SER HIS PRO VAL VAL ARG THR HIS PRO VAL SER GLY ARG SEQRES 16 B 277 LYS ALA LEU PHE VAL ASN GLU GLY PHE THR THR ARG ILE SEQRES 17 B 277 ASN GLU LEU SER GLU LEU GLU SER ASP ALA LEU LEU ARG SEQRES 18 B 277 LEU LEU PHE ALA HIS ALA THR ARG PRO GLU PHE SER ILE SEQRES 19 B 277 ARG TRP ARG TRP GLN GLU ASN ASP VAL ALA PHE TRP ASP SEQRES 20 B 277 ASN ARG VAL THR GLN HIS PHE ALA VAL ASP ASP TYR ARG SEQRES 21 B 277 PRO ASN ARG ARG VAL MET HIS ARG ALA THR ILE LEU GLY SEQRES 22 B 277 ASP ALA PRO PHE SEQRES 1 D 277 MET SER LEU THR ILE THR PRO LEU SER PRO ALA LEU GLY SEQRES 2 D 277 ALA GLN ILE SER GLY VAL ASP ILE SER ARG ASP ILE SER SEQRES 3 D 277 ALA GLU GLU ARG ASP ALA ILE GLU GLN ALA LEU LEU GLN SEQRES 4 D 277 HIS GLN VAL LEU PHE LEU ARG ASP GLN PRO ILE ASN PRO SEQRES 5 D 277 GLU GLN GLN ALA ARG PHE ALA ALA ARG PHE GLY ASP LEU SEQRES 6 D 277 HIS ILE HIS PRO ILE TYR PRO ASN VAL PRO ASP THR PRO SEQRES 7 D 277 GLN VAL LEU VAL LEU ASP THR ALA VAL THR ASP VAL ARG SEQRES 8 D 277 ASP ASN ALA VAL TRP HIS THR ASP VAL THR PHE LEU PRO SEQRES 9 D 277 THR PRO ALA LEU GLY ALA VAL LEU SER ALA LYS GLN LEU SEQRES 10 D 277 PRO ALA TYR GLY GLY ASP THR LEU TRP ALA SER GLY ILE SEQRES 11 D 277 ALA ALA PHE GLU ALA LEU SER ALA PRO LEU ARG GLU MET SEQRES 12 D 277 LEU ASP GLY LEU THR ALA THR HIS ASP PHE THR LYS SER SEQRES 13 D 277 PHE PRO LEU GLU ARG PHE GLY THR THR PRO GLN ASP LEU SEQRES 14 D 277 ALA ARG TRP GLU ALA THR ARG ARG ASN ASN PRO PRO LEU SEQRES 15 D 277 SER HIS PRO VAL VAL ARG THR HIS PRO VAL SER GLY ARG SEQRES 16 D 277 LYS ALA LEU PHE VAL ASN GLU GLY PHE THR THR ARG ILE SEQRES 17 D 277 ASN GLU LEU SER GLU LEU GLU SER ASP ALA LEU LEU ARG SEQRES 18 D 277 LEU LEU PHE ALA HIS ALA THR ARG PRO GLU PHE SER ILE SEQRES 19 D 277 ARG TRP ARG TRP GLN GLU ASN ASP VAL ALA PHE TRP ASP SEQRES 20 D 277 ASN ARG VAL THR GLN HIS PHE ALA VAL ASP ASP TYR ARG SEQRES 21 D 277 PRO ASN ARG ARG VAL MET HIS ARG ALA THR ILE LEU GLY SEQRES 22 D 277 ASP ALA PRO PHE HET AKG A 279 10 HET AKG C 279 10 HET AKG B 279 10 HET AKG D 279 10 HETNAM AKG 2-OXOGLUTARIC ACID FORMUL 5 AKG 4(C5 H6 O5) FORMUL 9 HOH *402(H2 O) HELIX 1 1 SER A 26 GLN A 41 1 16 HELIX 2 2 ASN A 51 ALA A 60 1 10 HELIX 3 3 ARG A 61 GLY A 63 5 3 HELIX 4 4 VAL A 90 ALA A 94 5 5 HELIX 5 5 GLY A 129 LEU A 136 1 8 HELIX 6 6 SER A 137 ASP A 145 1 9 HELIX 7 7 PHE A 153 SER A 156 5 4 HELIX 8 8 PRO A 158 GLY A 163 1 6 HELIX 9 9 THR A 165 ASN A 179 1 15 HELIX 10 10 SER A 212 THR A 228 1 17 HELIX 11 11 ARG A 229 GLU A 231 5 3 HELIX 12 12 SER C 26 GLN C 41 1 16 HELIX 13 13 ASN C 51 ALA C 60 1 10 HELIX 14 14 ARG C 61 GLY C 63 5 3 HELIX 15 15 VAL C 90 ALA C 94 5 5 HELIX 16 16 GLY C 129 LEU C 136 1 8 HELIX 17 17 SER C 137 ASP C 145 1 9 HELIX 18 18 PHE C 153 SER C 156 5 4 HELIX 19 19 THR C 165 ASN C 179 1 15 HELIX 20 20 SER C 212 ALA C 227 1 16 HELIX 21 21 THR C 228 GLU C 231 5 4 HELIX 22 22 SER B 26 GLN B 41 1 16 HELIX 23 23 ASN B 51 ALA B 60 1 10 HELIX 24 24 ARG B 61 GLY B 63 5 3 HELIX 25 25 VAL B 90 ALA B 94 5 5 HELIX 26 26 GLY B 129 LEU B 136 1 8 HELIX 27 27 SER B 137 ASP B 145 1 9 HELIX 28 28 PHE B 153 SER B 156 5 4 HELIX 29 29 PRO B 158 PHE B 162 5 5 HELIX 30 30 THR B 165 ASN B 179 1 15 HELIX 31 31 SER B 212 THR B 228 1 17 HELIX 32 32 ARG B 229 GLU B 231 5 3 HELIX 33 33 SER D 26 GLN D 41 1 16 HELIX 34 34 ASN D 51 ALA D 60 1 10 HELIX 35 35 ARG D 61 GLY D 63 5 3 HELIX 36 36 VAL D 90 ALA D 94 5 5 HELIX 37 37 GLY D 129 LEU D 136 1 8 HELIX 38 38 SER D 137 ASP D 145 1 9 HELIX 39 39 PHE D 153 SER D 156 5 4 HELIX 40 40 ASP D 168 ASN D 179 1 12 HELIX 41 41 SER D 212 ALA D 227 1 16 HELIX 42 42 THR D 228 GLU D 231 5 4 SHEET 1 A 8 THR A 4 PRO A 7 0 SHEET 2 A 8 ALA A 14 SER A 17 -1 O GLN A 15 N THR A 6 SHEET 3 A 8 VAL A 42 LEU A 45 1 O PHE A 44 N ILE A 16 SHEET 4 A 8 VAL A 243 ASP A 247 -1 O PHE A 245 N LEU A 43 SHEET 5 A 8 GLY A 109 GLN A 116 -1 N LEU A 112 O ALA A 244 SHEET 6 A 8 VAL A 265 ILE A 271 -1 O ILE A 271 N GLY A 109 SHEET 7 A 8 THR A 77 ASP A 84 -1 N LEU A 81 O ARG A 268 SHEET 8 A 8 ASN A 73 VAL A 74 -1 N VAL A 74 O VAL A 80 SHEET 1 B 3 SER A 233 TRP A 236 0 SHEET 2 B 3 THR A 124 SER A 128 -1 N THR A 124 O TRP A 236 SHEET 3 B 3 THR A 251 ALA A 255 -1 O PHE A 254 N LEU A 125 SHEET 1 C 3 LEU A 182 PRO A 185 0 SHEET 2 C 3 THR A 148 HIS A 151 -1 N HIS A 151 O LEU A 182 SHEET 3 C 3 THR A 205 ILE A 208 -1 O ARG A 207 N THR A 150 SHEET 1 D 2 VAL A 187 THR A 189 0 SHEET 2 D 2 LYS A 196 LEU A 198 -1 O ALA A 197 N ARG A 188 SHEET 1 E 8 THR C 4 PRO C 7 0 SHEET 2 E 8 ALA C 14 SER C 17 -1 O GLN C 15 N THR C 6 SHEET 3 E 8 VAL C 42 LEU C 45 1 O PHE C 44 N ILE C 16 SHEET 4 E 8 VAL C 243 ASP C 247 -1 O PHE C 245 N LEU C 43 SHEET 5 E 8 GLY C 109 GLN C 116 -1 N LEU C 112 O ALA C 244 SHEET 6 E 8 VAL C 265 ILE C 271 -1 O HIS C 267 N SER C 113 SHEET 7 E 8 THR C 77 ASP C 84 -1 N LEU C 83 O MET C 266 SHEET 8 E 8 ASN C 73 VAL C 74 -1 N VAL C 74 O VAL C 80 SHEET 1 F 3 SER C 233 TRP C 236 0 SHEET 2 F 3 THR C 124 SER C 128 -1 N THR C 124 O TRP C 236 SHEET 3 F 3 THR C 251 ALA C 255 -1 O GLN C 252 N ALA C 127 SHEET 1 G 3 LEU C 182 PRO C 185 0 SHEET 2 G 3 THR C 148 HIS C 151 -1 N HIS C 151 O LEU C 182 SHEET 3 G 3 THR C 205 ILE C 208 -1 O ARG C 207 N THR C 150 SHEET 1 H 2 VAL C 187 THR C 189 0 SHEET 2 H 2 LYS C 196 LEU C 198 -1 O ALA C 197 N ARG C 188 SHEET 1 I 7 THR B 4 PRO B 7 0 SHEET 2 I 7 ALA B 14 SER B 17 -1 O GLN B 15 N THR B 6 SHEET 3 I 7 VAL B 42 LEU B 45 1 O PHE B 44 N ALA B 14 SHEET 4 I 7 VAL B 243 ASP B 247 -1 O VAL B 243 N LEU B 45 SHEET 5 I 7 GLY B 109 GLN B 116 -1 N LEU B 112 O ALA B 244 SHEET 6 I 7 VAL B 265 ILE B 271 -1 O HIS B 267 N SER B 113 SHEET 7 I 7 VAL B 80 ASP B 84 -1 N LEU B 83 O MET B 266 SHEET 1 J 3 SER B 233 TRP B 236 0 SHEET 2 J 3 THR B 124 SER B 128 -1 N THR B 124 O TRP B 236 SHEET 3 J 3 THR B 251 ALA B 255 -1 O PHE B 254 N LEU B 125 SHEET 1 K 3 LEU B 182 PRO B 185 0 SHEET 2 K 3 THR B 148 HIS B 151 -1 N HIS B 151 O LEU B 182 SHEET 3 K 3 THR B 205 ILE B 208 -1 O ARG B 207 N THR B 150 SHEET 1 L 2 VAL B 187 THR B 189 0 SHEET 2 L 2 LYS B 196 LEU B 198 -1 O ALA B 197 N ARG B 188 SHEET 1 M 7 THR D 4 PRO D 7 0 SHEET 2 M 7 ALA D 14 SER D 17 -1 O GLN D 15 N THR D 6 SHEET 3 M 7 VAL D 42 LEU D 45 1 O PHE D 44 N ILE D 16 SHEET 4 M 7 VAL D 243 ASP D 247 -1 O PHE D 245 N LEU D 43 SHEET 5 M 7 GLY D 109 GLN D 116 -1 N LEU D 112 O ALA D 244 SHEET 6 M 7 VAL D 265 ILE D 271 -1 O HIS D 267 N SER D 113 SHEET 7 M 7 VAL D 80 ASP D 84 -1 N LEU D 81 O ARG D 268 SHEET 1 N 3 SER D 233 TRP D 236 0 SHEET 2 N 3 THR D 124 SER D 128 -1 N THR D 124 O TRP D 236 SHEET 3 N 3 THR D 251 ALA D 255 -1 O PHE D 254 N LEU D 125 SHEET 1 O 3 LEU D 182 PRO D 185 0 SHEET 2 O 3 THR D 148 HIS D 151 -1 N HIS D 151 O LEU D 182 SHEET 3 O 3 THR D 205 ILE D 208 -1 O ARG D 207 N THR D 150 SHEET 1 P 2 VAL D 187 THR D 189 0 SHEET 2 P 2 LYS D 196 LEU D 198 -1 O ALA D 197 N ARG D 188 CISPEP 1 ARG A 260 PRO A 261 0 -1.10 CISPEP 2 ARG C 260 PRO C 261 0 1.26 CISPEP 3 PRO B 72 ASN B 73 0 2.02 CISPEP 4 ASN B 73 VAL B 74 0 0.43 CISPEP 5 ARG B 260 PRO B 261 0 1.77 CISPEP 6 ARG D 260 PRO D 261 0 1.12 SITE 1 AC1 5 LEU A 112 THR A 124 HIS A 253 ARG A 264 SITE 2 AC1 5 ARG A 268 SITE 1 AC2 7 ASP C 99 LEU C 112 THR C 124 TRP C 246 SITE 2 AC2 7 HIS C 253 ARG C 264 ARG C 268 SITE 1 AC3 5 ASN B 93 THR B 124 HIS B 253 ALA B 255 SITE 2 AC3 5 ARG B 264 SITE 1 AC4 10 LEU D 83 ASN D 93 HIS D 97 THR D 124 SITE 2 AC4 10 TRP D 246 HIS D 253 ARG D 264 MET D 266 SITE 3 AC4 10 ARG D 268 HOH D 335 CRYST1 112.093 112.093 214.018 90.00 90.00 120.00 P 32 2 1 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008921 0.005151 0.000000 0.00000 SCALE2 0.000000 0.010301 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004673 0.00000