data_3V4F # _entry.id 3V4F # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3V4F pdb_00003v4f 10.2210/pdb3v4f/pdb RCSB RCSB069581 ? ? WWPDB D_1000069581 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-08-08 2 'Structure model' 1 1 2012-08-15 3 'Structure model' 1 2 2012-10-17 4 'Structure model' 1 3 2017-11-08 5 'Structure model' 1 4 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_struct_conn_angle 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_ref_seq_dif 8 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.name' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.value' 19 5 'Structure model' '_struct_conn.pdbx_dist_value' 20 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 21 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 23 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 24 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 25 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 26 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 27 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 28 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 29 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 30 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 31 5 'Structure model' '_struct_ref_seq_dif.details' 32 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 33 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 34 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 3V4F _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-12-14 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Holzapfel, G.' 1 'Mattos, C.' 2 # _citation.id primary _citation.title ;Shift in the Equilibrium between On and Off States of the Allosteric Switch in Ras-GppNHp Affected by Small Molecules and Bulk Solvent Composition. ; _citation.journal_abbrev Biochemistry _citation.journal_volume 51 _citation.page_first 6114 _citation.page_last 6126 _citation.year 2012 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22845804 _citation.pdbx_database_id_DOI 10.1021/bi300509j # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Holzapfel, G.' 1 ? primary 'Buhrman, G.' 2 ? primary 'Mattos, C.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'GTPase HRas' 18876.178 1 ? ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 4 non-polymer syn '(2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL' 154.251 1 ? ? ? ? 5 non-polymer syn 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' 522.196 1 ? ? ? ? 6 water nat water 18.015 173 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'H-Ras-1, Transforming protein p21, c-H-ras, p21ras, GTPase HRas, N-terminally processed' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDEYMRTGEGFLC VFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLV REIRQH ; _entity_poly.pdbx_seq_one_letter_code_can ;MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDEYMRTGEGFLC VFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLV REIRQH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 'MAGNESIUM ION' MG 4 '(2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL' DTU 5 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' GNP 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 THR n 1 3 GLU n 1 4 TYR n 1 5 LYS n 1 6 LEU n 1 7 VAL n 1 8 VAL n 1 9 VAL n 1 10 GLY n 1 11 ALA n 1 12 GLY n 1 13 GLY n 1 14 VAL n 1 15 GLY n 1 16 LYS n 1 17 SER n 1 18 ALA n 1 19 LEU n 1 20 THR n 1 21 ILE n 1 22 GLN n 1 23 LEU n 1 24 ILE n 1 25 GLN n 1 26 ASN n 1 27 HIS n 1 28 PHE n 1 29 VAL n 1 30 ASP n 1 31 GLU n 1 32 TYR n 1 33 ASP n 1 34 PRO n 1 35 THR n 1 36 ILE n 1 37 GLU n 1 38 ASP n 1 39 SER n 1 40 TYR n 1 41 ARG n 1 42 LYS n 1 43 GLN n 1 44 VAL n 1 45 VAL n 1 46 ILE n 1 47 ASP n 1 48 GLY n 1 49 GLU n 1 50 THR n 1 51 CYS n 1 52 LEU n 1 53 LEU n 1 54 ASP n 1 55 ILE n 1 56 LEU n 1 57 ASP n 1 58 THR n 1 59 ALA n 1 60 GLY n 1 61 GLN n 1 62 GLU n 1 63 GLU n 1 64 TYR n 1 65 SER n 1 66 ALA n 1 67 MET n 1 68 ARG n 1 69 ASP n 1 70 GLU n 1 71 TYR n 1 72 MET n 1 73 ARG n 1 74 THR n 1 75 GLY n 1 76 GLU n 1 77 GLY n 1 78 PHE n 1 79 LEU n 1 80 CYS n 1 81 VAL n 1 82 PHE n 1 83 ALA n 1 84 ILE n 1 85 ASN n 1 86 ASN n 1 87 THR n 1 88 LYS n 1 89 SER n 1 90 PHE n 1 91 GLU n 1 92 ASP n 1 93 ILE n 1 94 HIS n 1 95 GLN n 1 96 TYR n 1 97 ARG n 1 98 GLU n 1 99 GLN n 1 100 ILE n 1 101 LYS n 1 102 ARG n 1 103 VAL n 1 104 LYS n 1 105 ASP n 1 106 SER n 1 107 ASP n 1 108 ASP n 1 109 VAL n 1 110 PRO n 1 111 MET n 1 112 VAL n 1 113 LEU n 1 114 VAL n 1 115 GLY n 1 116 ASN n 1 117 LYS n 1 118 CYS n 1 119 ASP n 1 120 LEU n 1 121 ALA n 1 122 ALA n 1 123 ARG n 1 124 THR n 1 125 VAL n 1 126 GLU n 1 127 SER n 1 128 ARG n 1 129 GLN n 1 130 ALA n 1 131 GLN n 1 132 ASP n 1 133 LEU n 1 134 ALA n 1 135 ARG n 1 136 SER n 1 137 TYR n 1 138 GLY n 1 139 ILE n 1 140 PRO n 1 141 TYR n 1 142 ILE n 1 143 GLU n 1 144 THR n 1 145 SER n 1 146 ALA n 1 147 LYS n 1 148 THR n 1 149 ARG n 1 150 GLN n 1 151 GLY n 1 152 VAL n 1 153 GLU n 1 154 ASP n 1 155 ALA n 1 156 PHE n 1 157 TYR n 1 158 THR n 1 159 LEU n 1 160 VAL n 1 161 ARG n 1 162 GLU n 1 163 ILE n 1 164 ARG n 1 165 GLN n 1 166 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name rat _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Hras, Hras1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rattus norvegicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10116 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET21 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DTU non-polymer . '(2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL' ? 'C4 H10 O2 S2' 154.251 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GNP non-polymer . 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' ? 'C10 H17 N6 O13 P3' 522.196 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 THR 2 2 2 THR THR A . n A 1 3 GLU 3 3 3 GLU GLU A . n A 1 4 TYR 4 4 4 TYR TYR A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 GLN 22 22 22 GLN GLN A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 ILE 24 24 24 ILE ILE A . n A 1 25 GLN 25 25 25 GLN GLN A . n A 1 26 ASN 26 26 26 ASN ASN A . n A 1 27 HIS 27 27 27 HIS HIS A . n A 1 28 PHE 28 28 28 PHE PHE A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 ASP 33 33 33 ASP ASP A . n A 1 34 PRO 34 34 34 PRO PRO A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 TYR 40 40 40 TYR TYR A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 GLN 43 43 43 GLN GLN A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 CYS 51 51 51 CYS CYS A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 TYR 64 64 64 TYR TYR A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 MET 67 67 67 MET MET A . n A 1 68 ARG 68 68 68 ARG ARG A . n A 1 69 ASP 69 69 69 ASP ASP A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 TYR 71 71 71 TYR TYR A . n A 1 72 MET 72 72 72 MET MET A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 GLY 75 75 75 GLY GLY A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 PHE 78 78 78 PHE PHE A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 CYS 80 80 80 CYS CYS A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 PHE 82 82 82 PHE PHE A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 ASN 85 85 85 ASN ASN A . n A 1 86 ASN 86 86 86 ASN ASN A . n A 1 87 THR 87 87 87 THR THR A . n A 1 88 LYS 88 88 88 LYS LYS A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 PHE 90 90 90 PHE PHE A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 HIS 94 94 94 HIS HIS A . n A 1 95 GLN 95 95 95 GLN GLN A . n A 1 96 TYR 96 96 96 TYR TYR A . n A 1 97 ARG 97 97 97 ARG ARG A . n A 1 98 GLU 98 98 98 GLU GLU A . n A 1 99 GLN 99 99 99 GLN GLN A . n A 1 100 ILE 100 100 100 ILE ILE A . n A 1 101 LYS 101 101 101 LYS LYS A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 LYS 104 104 104 LYS LYS A . n A 1 105 ASP 105 105 105 ASP ASP A . n A 1 106 SER 106 106 106 SER SER A . n A 1 107 ASP 107 107 107 ASP ASP A . n A 1 108 ASP 108 108 108 ASP ASP A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 PRO 110 110 110 PRO PRO A . n A 1 111 MET 111 111 111 MET MET A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 ASN 116 116 116 ASN ASN A . n A 1 117 LYS 117 117 117 LYS LYS A . n A 1 118 CYS 118 118 118 CYS CYS A . n A 1 119 ASP 119 119 119 ASP ASP A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 ARG 123 123 123 ARG ARG A . n A 1 124 THR 124 124 124 THR THR A . n A 1 125 VAL 125 125 125 VAL VAL A . n A 1 126 GLU 126 126 126 GLU GLU A . n A 1 127 SER 127 127 127 SER SER A . n A 1 128 ARG 128 128 128 ARG ARG A . n A 1 129 GLN 129 129 129 GLN GLN A . n A 1 130 ALA 130 130 130 ALA ALA A . n A 1 131 GLN 131 131 131 GLN GLN A . n A 1 132 ASP 132 132 132 ASP ASP A . n A 1 133 LEU 133 133 133 LEU LEU A . n A 1 134 ALA 134 134 134 ALA ALA A . n A 1 135 ARG 135 135 135 ARG ARG A . n A 1 136 SER 136 136 136 SER SER A . n A 1 137 TYR 137 137 137 TYR TYR A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 ILE 139 139 139 ILE ILE A . n A 1 140 PRO 140 140 140 PRO PRO A . n A 1 141 TYR 141 141 141 TYR TYR A . n A 1 142 ILE 142 142 142 ILE ILE A . n A 1 143 GLU 143 143 143 GLU GLU A . n A 1 144 THR 144 144 144 THR THR A . n A 1 145 SER 145 145 145 SER SER A . n A 1 146 ALA 146 146 146 ALA ALA A . n A 1 147 LYS 147 147 147 LYS LYS A . n A 1 148 THR 148 148 148 THR THR A . n A 1 149 ARG 149 149 149 ARG ARG A . n A 1 150 GLN 150 150 150 GLN GLN A . n A 1 151 GLY 151 151 151 GLY GLY A . n A 1 152 VAL 152 152 152 VAL VAL A . n A 1 153 GLU 153 153 153 GLU GLU A . n A 1 154 ASP 154 154 154 ASP ASP A . n A 1 155 ALA 155 155 155 ALA ALA A . n A 1 156 PHE 156 156 156 PHE PHE A . n A 1 157 TYR 157 157 157 TYR TYR A . n A 1 158 THR 158 158 158 THR THR A . n A 1 159 LEU 159 159 159 LEU LEU A . n A 1 160 VAL 160 160 160 VAL VAL A . n A 1 161 ARG 161 161 161 ARG ARG A . n A 1 162 GLU 162 162 162 GLU GLU A . n A 1 163 ILE 163 163 163 ILE ILE A . n A 1 164 ARG 164 164 164 ARG ARG A . n A 1 165 GLN 165 165 165 GLN GLN A . n A 1 166 HIS 166 166 166 HIS HIS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 191 191 CA CA A . C 3 MG 1 192 192 MG MG A . D 3 MG 1 194 194 MG MG A . E 4 DTU 1 201 201 DTU DTU A . F 2 CA 1 196 196 CA CA A . G 5 GNP 1 190 190 GNP GNP A . H 6 HOH 1 175 175 HOH HOH A . H 6 HOH 2 301 301 HOH HOH A . H 6 HOH 3 302 302 HOH HOH A . H 6 HOH 4 304 304 HOH HOH A . H 6 HOH 5 306 306 HOH HOH A . H 6 HOH 6 307 307 HOH HOH A . H 6 HOH 7 308 308 HOH HOH A . H 6 HOH 8 309 309 HOH HOH A . H 6 HOH 9 310 310 HOH HOH A . H 6 HOH 10 311 311 HOH HOH A . H 6 HOH 11 312 312 HOH HOH A . H 6 HOH 12 313 313 HOH HOH A . H 6 HOH 13 314 314 HOH HOH A . H 6 HOH 14 315 315 HOH HOH A . H 6 HOH 15 316 316 HOH HOH A . H 6 HOH 16 317 317 HOH HOH A . H 6 HOH 17 318 318 HOH HOH A . H 6 HOH 18 320 320 HOH HOH A . H 6 HOH 19 321 321 HOH HOH A . H 6 HOH 20 322 322 HOH HOH A . H 6 HOH 21 323 323 HOH HOH A . H 6 HOH 22 324 324 HOH HOH A . H 6 HOH 23 325 325 HOH HOH A . H 6 HOH 24 326 326 HOH HOH A . H 6 HOH 25 327 327 HOH HOH A . H 6 HOH 26 328 328 HOH HOH A . H 6 HOH 27 329 329 HOH HOH A . H 6 HOH 28 330 330 HOH HOH A . H 6 HOH 29 331 331 HOH HOH A . H 6 HOH 30 332 332 HOH HOH A . H 6 HOH 31 333 333 HOH HOH A . H 6 HOH 32 334 334 HOH HOH A . H 6 HOH 33 336 336 HOH HOH A . H 6 HOH 34 337 337 HOH HOH A . H 6 HOH 35 338 338 HOH HOH A . H 6 HOH 36 339 339 HOH HOH A . H 6 HOH 37 341 341 HOH HOH A . H 6 HOH 38 342 342 HOH HOH A . H 6 HOH 39 343 343 HOH HOH A . H 6 HOH 40 344 344 HOH HOH A . H 6 HOH 41 345 345 HOH HOH A . H 6 HOH 42 346 346 HOH HOH A . H 6 HOH 43 347 347 HOH HOH A . H 6 HOH 44 348 348 HOH HOH A . H 6 HOH 45 349 349 HOH HOH A . H 6 HOH 46 350 350 HOH HOH A . H 6 HOH 47 351 351 HOH HOH A . H 6 HOH 48 352 352 HOH HOH A . H 6 HOH 49 353 353 HOH HOH A . H 6 HOH 50 354 354 HOH HOH A . H 6 HOH 51 355 355 HOH HOH A . H 6 HOH 52 357 357 HOH HOH A . H 6 HOH 53 359 359 HOH HOH A . H 6 HOH 54 360 360 HOH HOH A . H 6 HOH 55 361 361 HOH HOH A . H 6 HOH 56 363 363 HOH HOH A . H 6 HOH 57 364 364 HOH HOH A . H 6 HOH 58 365 365 HOH HOH A . H 6 HOH 59 366 366 HOH HOH A . H 6 HOH 60 368 368 HOH HOH A . H 6 HOH 61 369 369 HOH HOH A . H 6 HOH 62 370 370 HOH HOH A . H 6 HOH 63 371 371 HOH HOH A . H 6 HOH 64 372 372 HOH HOH A . H 6 HOH 65 373 373 HOH HOH A . H 6 HOH 66 374 374 HOH HOH A . H 6 HOH 67 375 375 HOH HOH A . H 6 HOH 68 376 376 HOH HOH A . H 6 HOH 69 377 377 HOH HOH A . H 6 HOH 70 379 379 HOH HOH A . H 6 HOH 71 380 380 HOH HOH A . H 6 HOH 72 381 381 HOH HOH A . H 6 HOH 73 383 383 HOH HOH A . H 6 HOH 74 384 384 HOH HOH A . H 6 HOH 75 385 385 HOH HOH A . H 6 HOH 76 388 388 HOH HOH A . H 6 HOH 77 389 389 HOH HOH A . H 6 HOH 78 390 390 HOH HOH A . H 6 HOH 79 391 391 HOH HOH A . H 6 HOH 80 392 392 HOH HOH A . H 6 HOH 81 394 394 HOH HOH A . H 6 HOH 82 395 395 HOH HOH A . H 6 HOH 83 396 396 HOH HOH A . H 6 HOH 84 397 397 HOH HOH A . H 6 HOH 85 398 398 HOH HOH A . H 6 HOH 86 401 401 HOH HOH A . H 6 HOH 87 405 405 HOH HOH A . H 6 HOH 88 406 406 HOH HOH A . H 6 HOH 89 407 407 HOH HOH A . H 6 HOH 90 408 408 HOH HOH A . H 6 HOH 91 409 409 HOH HOH A . H 6 HOH 92 410 410 HOH HOH A . H 6 HOH 93 412 412 HOH HOH A . H 6 HOH 94 413 413 HOH HOH A . H 6 HOH 95 414 414 HOH HOH A . H 6 HOH 96 415 415 HOH HOH A . H 6 HOH 97 416 416 HOH HOH A . H 6 HOH 98 418 418 HOH HOH A . H 6 HOH 99 421 421 HOH HOH A . H 6 HOH 100 423 423 HOH HOH A . H 6 HOH 101 424 424 HOH HOH A . H 6 HOH 102 427 427 HOH HOH A . H 6 HOH 103 428 428 HOH HOH A . H 6 HOH 104 430 430 HOH HOH A . H 6 HOH 105 434 434 HOH HOH A . H 6 HOH 106 436 436 HOH HOH A . H 6 HOH 107 440 440 HOH HOH A . H 6 HOH 108 442 442 HOH HOH A . H 6 HOH 109 443 443 HOH HOH A . H 6 HOH 110 452 452 HOH HOH A . H 6 HOH 111 454 454 HOH HOH A . H 6 HOH 112 461 461 HOH HOH A . H 6 HOH 113 462 462 HOH HOH A . H 6 HOH 114 463 463 HOH HOH A . H 6 HOH 115 468 468 HOH HOH A . H 6 HOH 116 469 469 HOH HOH A . H 6 HOH 117 474 474 HOH HOH A . H 6 HOH 118 475 475 HOH HOH A . H 6 HOH 119 476 476 HOH HOH A . H 6 HOH 120 485 485 HOH HOH A . H 6 HOH 121 495 495 HOH HOH A . H 6 HOH 122 500 500 HOH HOH A . H 6 HOH 123 503 503 HOH HOH A . H 6 HOH 124 504 504 HOH HOH A . H 6 HOH 125 505 505 HOH HOH A . H 6 HOH 126 507 507 HOH HOH A . H 6 HOH 127 508 508 HOH HOH A . H 6 HOH 128 510 510 HOH HOH A . H 6 HOH 129 519 519 HOH HOH A . H 6 HOH 130 524 524 HOH HOH A . H 6 HOH 131 539 539 HOH HOH A . H 6 HOH 132 542 542 HOH HOH A . H 6 HOH 133 543 543 HOH HOH A . H 6 HOH 134 544 544 HOH HOH A . H 6 HOH 135 545 545 HOH HOH A . H 6 HOH 136 1471 1471 HOH HOH A . H 6 HOH 137 1472 1472 HOH HOH A . H 6 HOH 138 1473 1473 HOH HOH A . H 6 HOH 139 1474 1474 HOH HOH A . H 6 HOH 140 1475 1475 HOH HOH A . H 6 HOH 141 1476 1476 HOH HOH A . H 6 HOH 142 1477 1477 HOH HOH A . H 6 HOH 143 1478 1478 HOH HOH A . H 6 HOH 144 1479 1479 HOH HOH A . H 6 HOH 145 1480 1480 HOH HOH A . H 6 HOH 146 1481 1481 HOH HOH A . H 6 HOH 147 1482 1482 HOH HOH A . H 6 HOH 148 1483 1483 HOH HOH A . H 6 HOH 149 1484 1484 HOH HOH A . H 6 HOH 150 1485 1485 HOH HOH A . H 6 HOH 151 1486 1486 HOH HOH A . H 6 HOH 152 1487 1487 HOH HOH A . H 6 HOH 153 1488 1488 HOH HOH A . H 6 HOH 154 1489 1489 HOH HOH A . H 6 HOH 155 1490 1490 HOH HOH A . H 6 HOH 156 1491 1491 HOH HOH A . H 6 HOH 157 1492 1492 HOH HOH A . H 6 HOH 158 1493 1493 HOH HOH A . H 6 HOH 159 1494 1494 HOH HOH A . H 6 HOH 160 1495 1495 HOH HOH A . H 6 HOH 161 1496 1496 HOH HOH A . H 6 HOH 162 1497 1497 HOH HOH A . H 6 HOH 163 1498 1498 HOH HOH A . H 6 HOH 164 1499 1499 HOH HOH A . H 6 HOH 165 1500 1500 HOH HOH A . H 6 HOH 166 1501 1501 HOH HOH A . H 6 HOH 167 1502 1502 HOH HOH A . H 6 HOH 168 1503 1503 HOH HOH A . H 6 HOH 169 1504 1504 HOH HOH A . H 6 HOH 170 1505 1505 HOH HOH A . H 6 HOH 171 1506 1506 HOH HOH A . H 6 HOH 172 1507 1507 HOH HOH A . H 6 HOH 173 1508 1508 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 62 ? CG ? A GLU 62 CG 2 1 Y 1 A GLU 62 ? CD ? A GLU 62 CD 3 1 Y 1 A GLU 62 ? OE1 ? A GLU 62 OE1 4 1 Y 1 A GLU 62 ? OE2 ? A GLU 62 OE2 5 1 Y 1 A GLU 63 ? CG ? A GLU 63 CG 6 1 Y 1 A GLU 63 ? CD ? A GLU 63 CD 7 1 Y 1 A GLU 63 ? OE1 ? A GLU 63 OE1 8 1 Y 1 A GLU 63 ? OE2 ? A GLU 63 OE2 9 1 Y 1 A ARG 128 ? CG ? A ARG 128 CG 10 1 Y 1 A ARG 128 ? CD ? A ARG 128 CD 11 1 Y 1 A ARG 128 ? NE ? A ARG 128 NE 12 1 Y 1 A ARG 128 ? CZ ? A ARG 128 CZ 13 1 Y 1 A ARG 128 ? NH1 ? A ARG 128 NH1 14 1 Y 1 A ARG 128 ? NH2 ? A ARG 128 NH2 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 PHENIX 1.7.1_743 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 DENZO . ? ? ? ? 'data reduction' ? ? ? # _cell.length_a 88.521 _cell.length_b 88.521 _cell.length_c 134.060 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 3V4F _cell.pdbx_unique_axis ? _cell.Z_PDB 18 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'H 3 2' _symmetry.entry_id 3V4F _symmetry.Int_Tables_number 155 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3V4F _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.68 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 54.06 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details '20% PEG 3350 200 mM CaCl2, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2011-12-05 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator crystal _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type APS _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 3V4F _reflns.d_resolution_high 1.390 _reflns.d_resolution_low 35.000 _reflns.number_obs 40675 _reflns.pdbx_Rmerge_I_obs 0.063 _reflns.pdbx_netI_over_sigmaI 14.100 _reflns.pdbx_chi_squared 1.878 _reflns.pdbx_redundancy 10.100 _reflns.percent_possible_obs 99.900 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.390 1.410 ? ? ? 0.796 ? ? 1.300 5.000 ? 1979 98.400 1 1 1.410 1.440 ? ? ? 0.734 ? ? 1.311 6.200 ? 1995 99.800 2 1 1.440 1.470 ? ? ? 0.648 ? ? 1.260 7.700 ? 2024 100.000 3 1 1.470 1.500 ? ? ? 0.583 ? ? 1.218 9.200 ? 2013 100.000 4 1 1.500 1.530 ? ? ? 0.501 ? ? 1.282 10.100 ? 2034 100.000 5 1 1.530 1.570 ? ? ? 0.405 ? ? 1.268 10.700 ? 2016 100.000 6 1 1.570 1.600 ? ? ? 0.338 ? ? 1.245 10.900 ? 2004 100.000 7 1 1.600 1.650 ? ? ? 0.278 ? ? 1.334 11.000 ? 2020 100.000 8 1 1.650 1.700 ? ? ? 0.236 ? ? 1.414 11.000 ? 2036 100.000 9 1 1.700 1.750 ? ? ? 0.198 ? ? 1.554 11.100 ? 2011 100.000 10 1 1.750 1.810 ? ? ? 0.157 ? ? 1.703 11.100 ? 2017 100.000 11 1 1.810 1.890 ? ? ? 0.128 ? ? 1.811 11.100 ? 2055 100.000 12 1 1.890 1.970 ? ? ? 0.102 ? ? 2.040 11.000 ? 2018 100.000 13 1 1.970 2.080 ? ? ? 0.084 ? ? 2.221 11.000 ? 2025 100.000 14 1 2.080 2.210 ? ? ? 0.072 ? ? 2.424 11.000 ? 2046 100.000 15 1 2.210 2.380 ? ? ? 0.064 ? ? 2.674 10.800 ? 2036 100.000 16 1 2.380 2.620 ? ? ? 0.054 ? ? 2.631 10.800 ? 2067 100.000 17 1 2.620 2.990 ? ? ? 0.046 ? ? 2.535 10.700 ? 2042 100.000 18 1 2.990 3.770 ? ? ? 0.040 ? ? 2.630 10.500 ? 2091 100.000 19 1 3.770 35.000 ? ? ? 0.040 ? ? 2.767 9.700 ? 2146 99.500 20 1 # _refine.entry_id 3V4F _refine.ls_d_res_high 1.3910 _refine.ls_d_res_low 33.2740 _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.6800 _refine.ls_number_reflns_obs 40649 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1836 _refine.ls_R_factor_R_work 0.1828 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1979 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.9200 _refine.ls_number_reflns_R_free 1999 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 20.8433 _refine.solvent_model_param_bsol 55.8570 _refine.solvent_model_param_ksol 0.4230 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -1.0946 _refine.aniso_B[2][2] -1.0946 _refine.aniso_B[3][3] 2.1892 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.3700 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 65.090 _refine.B_iso_min 7.780 _refine.pdbx_overall_phase_error 18.2600 _refine.occupancy_max 1.000 _refine.occupancy_min 0.460 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1309 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 44 _refine_hist.number_atoms_solvent 173 _refine_hist.number_atoms_total 1526 _refine_hist.d_res_high 1.3910 _refine_hist.d_res_low 33.2740 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 1397 0.007 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 1901 1.169 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 214 0.068 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 244 0.005 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 530 14.370 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 1.3906 1.4254 14 96.0000 2634 . 0.3826 0.3437 . 137 . 2771 . . 'X-RAY DIFFRACTION' 1.4254 1.4640 14 100.0000 2726 . 0.3121 0.3256 . 142 . 2868 . . 'X-RAY DIFFRACTION' 1.4640 1.5070 14 100.0000 2755 . 0.2576 0.2935 . 142 . 2897 . . 'X-RAY DIFFRACTION' 1.5070 1.5557 14 100.0000 2741 . 0.2084 0.2141 . 141 . 2882 . . 'X-RAY DIFFRACTION' 1.5557 1.6113 14 100.0000 2749 . 0.1863 0.1870 . 142 . 2891 . . 'X-RAY DIFFRACTION' 1.6113 1.6758 14 100.0000 2741 . 0.1799 0.1849 . 142 . 2883 . . 'X-RAY DIFFRACTION' 1.6758 1.7521 14 100.0000 2742 . 0.1735 0.2008 . 142 . 2884 . . 'X-RAY DIFFRACTION' 1.7521 1.8444 14 100.0000 2777 . 0.1649 0.1867 . 143 . 2920 . . 'X-RAY DIFFRACTION' 1.8444 1.9600 14 100.0000 2752 . 0.1590 0.1922 . 142 . 2894 . . 'X-RAY DIFFRACTION' 1.9600 2.1113 14 100.0000 2774 . 0.1732 0.2070 . 143 . 2917 . . 'X-RAY DIFFRACTION' 2.1113 2.3237 14 100.0000 2769 . 0.1746 0.1839 . 144 . 2913 . . 'X-RAY DIFFRACTION' 2.3237 2.6598 14 100.0000 2781 . 0.1812 0.1847 . 144 . 2925 . . 'X-RAY DIFFRACTION' 2.6598 3.3506 14 100.0000 2807 . 0.1769 0.1904 . 145 . 2952 . . 'X-RAY DIFFRACTION' 3.3506 33.2839 14 100.0000 2902 . 0.1743 0.1895 . 150 . 3052 . . 'X-RAY DIFFRACTION' # _struct.entry_id 3V4F _struct.title 'H-Ras PEG 400/CaCl2, ordered off' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3V4F _struct_keywords.text 'GTP-BINDING, NUCLEOTIDE BINDING, SIGNALING PROTEIN' _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 2 ? G N N 5 ? H N N 6 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RASH_RAT _struct_ref.pdbx_db_accession P20171 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLC VFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLV REIRQH ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3V4F _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 166 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P20171 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 166 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 166 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3V4F _struct_ref_seq_dif.mon_id GLU _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 70 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P20171 _struct_ref_seq_dif.db_mon_id GLN _struct_ref_seq_dif.pdbx_seq_db_seq_num 70 _struct_ref_seq_dif.details conflict _struct_ref_seq_dif.pdbx_auth_seq_num 70 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 13800 ? 1 MORE -199 ? 1 'SSA (A^2)' 41260 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_675 -y+1,x-y+2,z -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 153.3228695368 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_465 -x+y-1,-x+1,z -0.5000000000 0.8660254038 0.0000000000 -132.7815000000 -0.8660254038 -0.5000000000 0.0000000000 76.6614347684 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_464 y-1,x+1,-z-1 -0.5000000000 0.8660254038 0.0000000000 -132.7815000000 0.8660254038 0.5000000000 0.0000000000 76.6614347684 0.0000000000 0.0000000000 -1.0000000000 -134.0600000000 5 'crystal symmetry operation' 5_674 x-y+1,-y+2,-z-1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 153.3228695368 0.0000000000 0.0000000000 -1.0000000000 -134.0600000000 6 'crystal symmetry operation' 6_554 -x,-x+y,-z-1 -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -134.0600000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 15 ? ASN A 26 ? GLY A 15 ASN A 26 1 ? 12 HELX_P HELX_P2 2 GLN A 61 ? SER A 65 ? GLN A 61 SER A 65 5 ? 5 HELX_P HELX_P3 3 MET A 67 ? ARG A 73 ? MET A 67 ARG A 73 1 ? 7 HELX_P HELX_P4 4 ASN A 86 ? ASP A 92 ? ASN A 86 ASP A 92 1 ? 7 HELX_P HELX_P5 5 ASP A 92 ? ASP A 105 ? ASP A 92 ASP A 105 1 ? 14 HELX_P HELX_P6 6 GLU A 126 ? GLY A 138 ? GLU A 126 GLY A 138 1 ? 13 HELX_P HELX_P7 7 GLY A 151 ? ARG A 164 ? GLY A 151 ARG A 164 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A SER 17 OG ? ? ? 1_555 C MG . MG ? ? A SER 17 A MG 192 1_555 ? ? ? ? ? ? ? 2.121 ? ? metalc2 metalc ? ? A PHE 28 O ? ? ? 1_555 B CA . CA ? ? A PHE 28 A CA 191 1_555 ? ? ? ? ? ? ? 2.338 ? ? metalc3 metalc ? ? A ASP 30 OD1 ? ? ? 1_555 B CA . CA ? ? A ASP 30 A CA 191 1_555 ? ? ? ? ? ? ? 2.447 ? ? metalc4 metalc ? ? A THR 35 OG1 ? ? ? 1_555 C MG . MG ? ? A THR 35 A MG 192 1_555 ? ? ? ? ? ? ? 2.139 ? ? metalc5 metalc ? ? A ARG 102 O ? ? ? 1_555 F CA . CA ? ? A ARG 102 A CA 196 1_555 ? ? ? ? ? ? ? 2.268 ? ? metalc6 metalc ? ? A ASP 105 OD1 ? ? ? 1_555 F CA . CA ? ? A ASP 105 A CA 196 1_555 ? ? ? ? ? ? ? 2.684 ? ? metalc7 metalc ? ? A ASP 105 OD2 ? ? ? 1_555 F CA . CA ? ? A ASP 105 A CA 196 1_555 ? ? ? ? ? ? ? 3.122 ? ? metalc8 metalc ? ? G GNP . O2G ? ? ? 1_555 C MG . MG ? ? A GNP 190 A MG 192 1_555 ? ? ? ? ? ? ? 2.024 ? ? metalc9 metalc ? ? G GNP . O2B ? ? ? 1_555 C MG . MG ? ? A GNP 190 A MG 192 1_555 ? ? ? ? ? ? ? 2.090 ? ? metalc10 metalc ? ? B CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 191 A HOH 309 1_555 ? ? ? ? ? ? ? 2.443 ? ? metalc11 metalc ? ? B CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 191 A HOH 1474 1_555 ? ? ? ? ? ? ? 2.520 ? ? metalc12 metalc ? ? C MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 192 A HOH 301 1_555 ? ? ? ? ? ? ? 2.142 ? ? metalc13 metalc ? ? C MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 192 A HOH 544 1_555 ? ? ? ? ? ? ? 2.125 ? ? metalc14 metalc ? ? D MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 194 A HOH 342 1_555 ? ? ? ? ? ? ? 2.594 ? ? metalc15 metalc ? ? D MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 194 A HOH 364 1_555 ? ? ? ? ? ? ? 2.414 ? ? metalc16 metalc ? ? D MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 194 A HOH 440 1_555 ? ? ? ? ? ? ? 2.879 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG ? A SER 17 ? A SER 17 ? 1_555 MG ? C MG . ? A MG 192 ? 1_555 OG1 ? A THR 35 ? A THR 35 ? 1_555 82.0 ? 2 OG ? A SER 17 ? A SER 17 ? 1_555 MG ? C MG . ? A MG 192 ? 1_555 O2G ? G GNP . ? A GNP 190 ? 1_555 172.7 ? 3 OG1 ? A THR 35 ? A THR 35 ? 1_555 MG ? C MG . ? A MG 192 ? 1_555 O2G ? G GNP . ? A GNP 190 ? 1_555 90.8 ? 4 OG ? A SER 17 ? A SER 17 ? 1_555 MG ? C MG . ? A MG 192 ? 1_555 O2B ? G GNP . ? A GNP 190 ? 1_555 91.9 ? 5 OG1 ? A THR 35 ? A THR 35 ? 1_555 MG ? C MG . ? A MG 192 ? 1_555 O2B ? G GNP . ? A GNP 190 ? 1_555 173.9 ? 6 O2G ? G GNP . ? A GNP 190 ? 1_555 MG ? C MG . ? A MG 192 ? 1_555 O2B ? G GNP . ? A GNP 190 ? 1_555 95.3 ? 7 OG ? A SER 17 ? A SER 17 ? 1_555 MG ? C MG . ? A MG 192 ? 1_555 O ? H HOH . ? A HOH 301 ? 1_555 88.5 ? 8 OG1 ? A THR 35 ? A THR 35 ? 1_555 MG ? C MG . ? A MG 192 ? 1_555 O ? H HOH . ? A HOH 301 ? 1_555 89.0 ? 9 O2G ? G GNP . ? A GNP 190 ? 1_555 MG ? C MG . ? A MG 192 ? 1_555 O ? H HOH . ? A HOH 301 ? 1_555 92.7 ? 10 O2B ? G GNP . ? A GNP 190 ? 1_555 MG ? C MG . ? A MG 192 ? 1_555 O ? H HOH . ? A HOH 301 ? 1_555 90.4 ? 11 OG ? A SER 17 ? A SER 17 ? 1_555 MG ? C MG . ? A MG 192 ? 1_555 O ? H HOH . ? A HOH 544 ? 1_555 86.4 ? 12 OG1 ? A THR 35 ? A THR 35 ? 1_555 MG ? C MG . ? A MG 192 ? 1_555 O ? H HOH . ? A HOH 544 ? 1_555 90.0 ? 13 O2G ? G GNP . ? A GNP 190 ? 1_555 MG ? C MG . ? A MG 192 ? 1_555 O ? H HOH . ? A HOH 544 ? 1_555 92.3 ? 14 O2B ? G GNP . ? A GNP 190 ? 1_555 MG ? C MG . ? A MG 192 ? 1_555 O ? H HOH . ? A HOH 544 ? 1_555 90.0 ? 15 O ? H HOH . ? A HOH 301 ? 1_555 MG ? C MG . ? A MG 192 ? 1_555 O ? H HOH . ? A HOH 544 ? 1_555 174.9 ? 16 O ? A PHE 28 ? A PHE 28 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 OD1 ? A ASP 30 ? A ASP 30 ? 1_555 84.2 ? 17 O ? A PHE 28 ? A PHE 28 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? H HOH . ? A HOH 309 ? 1_555 88.8 ? 18 OD1 ? A ASP 30 ? A ASP 30 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? H HOH . ? A HOH 309 ? 1_555 84.4 ? 19 O ? A PHE 28 ? A PHE 28 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? H HOH . ? A HOH 1474 ? 1_555 162.8 ? 20 OD1 ? A ASP 30 ? A ASP 30 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? H HOH . ? A HOH 1474 ? 1_555 78.6 ? 21 O ? H HOH . ? A HOH 309 ? 1_555 CA ? B CA . ? A CA 191 ? 1_555 O ? H HOH . ? A HOH 1474 ? 1_555 90.4 ? 22 O ? A ARG 102 ? A ARG 102 ? 1_555 CA ? F CA . ? A CA 196 ? 1_555 OD1 ? A ASP 105 ? A ASP 105 ? 1_555 95.4 ? 23 O ? A ARG 102 ? A ARG 102 ? 1_555 CA ? F CA . ? A CA 196 ? 1_555 OD2 ? A ASP 105 ? A ASP 105 ? 1_555 84.7 ? 24 OD1 ? A ASP 105 ? A ASP 105 ? 1_555 CA ? F CA . ? A CA 196 ? 1_555 OD2 ? A ASP 105 ? A ASP 105 ? 1_555 43.9 ? 25 O ? H HOH . ? A HOH 342 ? 1_555 MG ? D MG . ? A MG 194 ? 1_555 O ? H HOH . ? A HOH 364 ? 1_555 75.6 ? 26 O ? H HOH . ? A HOH 342 ? 1_555 MG ? D MG . ? A MG 194 ? 1_555 O ? H HOH . ? A HOH 440 ? 1_555 126.4 ? 27 O ? H HOH . ? A HOH 364 ? 1_555 MG ? D MG . ? A MG 194 ? 1_555 O ? H HOH . ? A HOH 440 ? 1_555 69.2 ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 37 ? ILE A 46 ? GLU A 37 ILE A 46 A 2 GLU A 49 ? THR A 58 ? GLU A 49 THR A 58 A 3 THR A 2 ? GLY A 10 ? THR A 2 GLY A 10 A 4 GLY A 77 ? ALA A 83 ? GLY A 77 ALA A 83 A 5 MET A 111 ? ASN A 116 ? MET A 111 ASN A 116 A 6 TYR A 141 ? GLU A 143 ? TYR A 141 GLU A 143 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 42 ? N LYS A 42 O LEU A 53 ? O LEU A 53 A 2 3 O LEU A 56 ? O LEU A 56 N LEU A 6 ? N LEU A 6 A 3 4 N VAL A 9 ? N VAL A 9 O VAL A 81 ? O VAL A 81 A 4 5 N PHE A 82 ? N PHE A 82 O ASN A 116 ? O ASN A 116 A 5 6 N LEU A 113 ? N LEU A 113 O ILE A 142 ? O ILE A 142 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CA 191 ? 6 'BINDING SITE FOR RESIDUE CA A 191' AC2 Software A MG 192 ? 5 'BINDING SITE FOR RESIDUE MG A 192' AC3 Software A MG 194 ? 9 'BINDING SITE FOR RESIDUE MG A 194' AC4 Software A DTU 201 ? 5 'BINDING SITE FOR RESIDUE DTU A 201' AC5 Software A CA 196 ? 4 'BINDING SITE FOR RESIDUE CA A 196' AC6 Software A GNP 190 ? 32 'BINDING SITE FOR RESIDUE GNP A 190' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 PHE A 28 ? PHE A 28 . ? 1_555 ? 2 AC1 6 ASP A 30 ? ASP A 30 . ? 1_555 ? 3 AC1 6 GLU A 31 ? GLU A 31 . ? 5_674 ? 4 AC1 6 ASP A 33 ? ASP A 33 . ? 5_674 ? 5 AC1 6 HOH H . ? HOH A 309 . ? 1_555 ? 6 AC1 6 HOH H . ? HOH A 1474 . ? 1_555 ? 7 AC2 5 SER A 17 ? SER A 17 . ? 1_555 ? 8 AC2 5 THR A 35 ? THR A 35 . ? 1_555 ? 9 AC2 5 GNP G . ? GNP A 190 . ? 1_555 ? 10 AC2 5 HOH H . ? HOH A 301 . ? 1_555 ? 11 AC2 5 HOH H . ? HOH A 544 . ? 1_555 ? 12 AC3 9 HOH H . ? HOH A 342 . ? 1_555 ? 13 AC3 9 HOH H . ? HOH A 342 . ? 2_665 ? 14 AC3 9 HOH H . ? HOH A 342 . ? 3_565 ? 15 AC3 9 HOH H . ? HOH A 364 . ? 1_555 ? 16 AC3 9 HOH H . ? HOH A 364 . ? 3_565 ? 17 AC3 9 HOH H . ? HOH A 364 . ? 2_665 ? 18 AC3 9 HOH H . ? HOH A 440 . ? 3_565 ? 19 AC3 9 HOH H . ? HOH A 440 . ? 2_665 ? 20 AC3 9 HOH H . ? HOH A 440 . ? 1_555 ? 21 AC4 5 ARG A 68 ? ARG A 68 . ? 1_555 ? 22 AC4 5 ASP A 92 ? ASP A 92 . ? 1_555 ? 23 AC4 5 GLN A 95 ? GLN A 95 . ? 1_555 ? 24 AC4 5 TYR A 96 ? TYR A 96 . ? 1_555 ? 25 AC4 5 GLN A 99 ? GLN A 99 . ? 1_555 ? 26 AC5 4 ARG A 102 ? ARG A 102 . ? 6_554 ? 27 AC5 4 ARG A 102 ? ARG A 102 . ? 1_555 ? 28 AC5 4 ASP A 105 ? ASP A 105 . ? 6_554 ? 29 AC5 4 ASP A 105 ? ASP A 105 . ? 1_555 ? 30 AC6 32 GLY A 12 ? GLY A 12 . ? 1_555 ? 31 AC6 32 GLY A 13 ? GLY A 13 . ? 1_555 ? 32 AC6 32 VAL A 14 ? VAL A 14 . ? 1_555 ? 33 AC6 32 GLY A 15 ? GLY A 15 . ? 1_555 ? 34 AC6 32 LYS A 16 ? LYS A 16 . ? 1_555 ? 35 AC6 32 SER A 17 ? SER A 17 . ? 1_555 ? 36 AC6 32 ALA A 18 ? ALA A 18 . ? 1_555 ? 37 AC6 32 PHE A 28 ? PHE A 28 . ? 1_555 ? 38 AC6 32 VAL A 29 ? VAL A 29 . ? 1_555 ? 39 AC6 32 ASP A 30 ? ASP A 30 . ? 1_555 ? 40 AC6 32 GLU A 31 ? GLU A 31 . ? 1_555 ? 41 AC6 32 TYR A 32 ? TYR A 32 . ? 1_555 ? 42 AC6 32 PRO A 34 ? PRO A 34 . ? 1_555 ? 43 AC6 32 THR A 35 ? THR A 35 . ? 1_555 ? 44 AC6 32 GLY A 60 ? GLY A 60 . ? 1_555 ? 45 AC6 32 GLN A 61 ? GLN A 61 . ? 1_555 ? 46 AC6 32 ASN A 116 ? ASN A 116 . ? 1_555 ? 47 AC6 32 LYS A 117 ? LYS A 117 . ? 1_555 ? 48 AC6 32 ASP A 119 ? ASP A 119 . ? 1_555 ? 49 AC6 32 LEU A 120 ? LEU A 120 . ? 1_555 ? 50 AC6 32 SER A 145 ? SER A 145 . ? 1_555 ? 51 AC6 32 ALA A 146 ? ALA A 146 . ? 1_555 ? 52 AC6 32 LYS A 147 ? LYS A 147 . ? 1_555 ? 53 AC6 32 HOH H . ? HOH A 175 . ? 1_555 ? 54 AC6 32 MG C . ? MG A 192 . ? 1_555 ? 55 AC6 32 HOH H . ? HOH A 301 . ? 1_555 ? 56 AC6 32 HOH H . ? HOH A 304 . ? 1_555 ? 57 AC6 32 HOH H . ? HOH A 327 . ? 1_555 ? 58 AC6 32 HOH H . ? HOH A 334 . ? 1_555 ? 59 AC6 32 HOH H . ? HOH A 390 . ? 1_555 ? 60 AC6 32 HOH H . ? HOH A 428 . ? 1_555 ? 61 AC6 32 HOH H . ? HOH A 544 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 360 ? ? O A HOH 1481 ? ? 2.11 2 1 O A GLY 138 ? ? O A HOH 545 ? ? 2.16 3 1 O A HOH 1502 ? ? O A HOH 1503 ? ? 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 36 ? ? -89.61 -85.06 2 1 LYS A 117 ? ? 71.28 34.47 3 1 ARG A 149 ? ? 79.93 -2.87 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A MG 194 ? D MG . 2 1 A CA 196 ? F CA . 3 1 A HOH 370 ? H HOH . 4 1 A HOH 392 ? H HOH . 5 1 A HOH 396 ? H HOH . 6 1 A HOH 407 ? H HOH . 7 1 A HOH 440 ? H HOH . 8 1 A HOH 1486 ? H HOH . 9 1 A HOH 1497 ? H HOH . # _phasing.method MR # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 DTU S1 S N N 89 DTU C1 C N N 90 DTU C2 C N S 91 DTU O2 O N N 92 DTU C3 C N R 93 DTU O3 O N N 94 DTU C4 C N N 95 DTU S4 S N N 96 DTU H1 H N N 97 DTU H1C1 H N N 98 DTU H1C2 H N N 99 DTU H2 H N N 100 DTU HA H N N 101 DTU H3 H N N 102 DTU HB H N N 103 DTU H4C1 H N N 104 DTU H4C2 H N N 105 DTU H4 H N N 106 GLN N N N N 107 GLN CA C N S 108 GLN C C N N 109 GLN O O N N 110 GLN CB C N N 111 GLN CG C N N 112 GLN CD C N N 113 GLN OE1 O N N 114 GLN NE2 N N N 115 GLN OXT O N N 116 GLN H H N N 117 GLN H2 H N N 118 GLN HA H N N 119 GLN HB2 H N N 120 GLN HB3 H N N 121 GLN HG2 H N N 122 GLN HG3 H N N 123 GLN HE21 H N N 124 GLN HE22 H N N 125 GLN HXT H N N 126 GLU N N N N 127 GLU CA C N S 128 GLU C C N N 129 GLU O O N N 130 GLU CB C N N 131 GLU CG C N N 132 GLU CD C N N 133 GLU OE1 O N N 134 GLU OE2 O N N 135 GLU OXT O N N 136 GLU H H N N 137 GLU H2 H N N 138 GLU HA H N N 139 GLU HB2 H N N 140 GLU HB3 H N N 141 GLU HG2 H N N 142 GLU HG3 H N N 143 GLU HE2 H N N 144 GLU HXT H N N 145 GLY N N N N 146 GLY CA C N N 147 GLY C C N N 148 GLY O O N N 149 GLY OXT O N N 150 GLY H H N N 151 GLY H2 H N N 152 GLY HA2 H N N 153 GLY HA3 H N N 154 GLY HXT H N N 155 GNP PG P N N 156 GNP O1G O N N 157 GNP O2G O N N 158 GNP O3G O N N 159 GNP N3B N N N 160 GNP PB P N R 161 GNP O1B O N N 162 GNP O2B O N N 163 GNP O3A O N N 164 GNP PA P N S 165 GNP O1A O N N 166 GNP O2A O N N 167 GNP "O5'" O N N 168 GNP "C5'" C N N 169 GNP "C4'" C N R 170 GNP "O4'" O N N 171 GNP "C3'" C N S 172 GNP "O3'" O N N 173 GNP "C2'" C N R 174 GNP "O2'" O N N 175 GNP "C1'" C N R 176 GNP N9 N Y N 177 GNP C8 C Y N 178 GNP N7 N Y N 179 GNP C5 C Y N 180 GNP C6 C Y N 181 GNP O6 O N N 182 GNP N1 N Y N 183 GNP C2 C Y N 184 GNP N2 N N N 185 GNP N3 N Y N 186 GNP C4 C Y N 187 GNP HOG2 H N N 188 GNP HOG3 H N N 189 GNP HNB3 H N N 190 GNP HOB2 H N N 191 GNP HOA2 H N N 192 GNP "H5'2" H N N 193 GNP "H5'1" H N N 194 GNP "H4'" H N N 195 GNP "H3'" H N N 196 GNP "HO3'" H N N 197 GNP "H2'" H N N 198 GNP "HO2'" H N N 199 GNP "H1'" H N N 200 GNP H8 H N N 201 GNP HN1 H N N 202 GNP HN21 H N N 203 GNP HN22 H N N 204 HIS N N N N 205 HIS CA C N S 206 HIS C C N N 207 HIS O O N N 208 HIS CB C N N 209 HIS CG C Y N 210 HIS ND1 N Y N 211 HIS CD2 C Y N 212 HIS CE1 C Y N 213 HIS NE2 N Y N 214 HIS OXT O N N 215 HIS H H N N 216 HIS H2 H N N 217 HIS HA H N N 218 HIS HB2 H N N 219 HIS HB3 H N N 220 HIS HD1 H N N 221 HIS HD2 H N N 222 HIS HE1 H N N 223 HIS HE2 H N N 224 HIS HXT H N N 225 HOH O O N N 226 HOH H1 H N N 227 HOH H2 H N N 228 ILE N N N N 229 ILE CA C N S 230 ILE C C N N 231 ILE O O N N 232 ILE CB C N S 233 ILE CG1 C N N 234 ILE CG2 C N N 235 ILE CD1 C N N 236 ILE OXT O N N 237 ILE H H N N 238 ILE H2 H N N 239 ILE HA H N N 240 ILE HB H N N 241 ILE HG12 H N N 242 ILE HG13 H N N 243 ILE HG21 H N N 244 ILE HG22 H N N 245 ILE HG23 H N N 246 ILE HD11 H N N 247 ILE HD12 H N N 248 ILE HD13 H N N 249 ILE HXT H N N 250 LEU N N N N 251 LEU CA C N S 252 LEU C C N N 253 LEU O O N N 254 LEU CB C N N 255 LEU CG C N N 256 LEU CD1 C N N 257 LEU CD2 C N N 258 LEU OXT O N N 259 LEU H H N N 260 LEU H2 H N N 261 LEU HA H N N 262 LEU HB2 H N N 263 LEU HB3 H N N 264 LEU HG H N N 265 LEU HD11 H N N 266 LEU HD12 H N N 267 LEU HD13 H N N 268 LEU HD21 H N N 269 LEU HD22 H N N 270 LEU HD23 H N N 271 LEU HXT H N N 272 LYS N N N N 273 LYS CA C N S 274 LYS C C N N 275 LYS O O N N 276 LYS CB C N N 277 LYS CG C N N 278 LYS CD C N N 279 LYS CE C N N 280 LYS NZ N N N 281 LYS OXT O N N 282 LYS H H N N 283 LYS H2 H N N 284 LYS HA H N N 285 LYS HB2 H N N 286 LYS HB3 H N N 287 LYS HG2 H N N 288 LYS HG3 H N N 289 LYS HD2 H N N 290 LYS HD3 H N N 291 LYS HE2 H N N 292 LYS HE3 H N N 293 LYS HZ1 H N N 294 LYS HZ2 H N N 295 LYS HZ3 H N N 296 LYS HXT H N N 297 MET N N N N 298 MET CA C N S 299 MET C C N N 300 MET O O N N 301 MET CB C N N 302 MET CG C N N 303 MET SD S N N 304 MET CE C N N 305 MET OXT O N N 306 MET H H N N 307 MET H2 H N N 308 MET HA H N N 309 MET HB2 H N N 310 MET HB3 H N N 311 MET HG2 H N N 312 MET HG3 H N N 313 MET HE1 H N N 314 MET HE2 H N N 315 MET HE3 H N N 316 MET HXT H N N 317 MG MG MG N N 318 PHE N N N N 319 PHE CA C N S 320 PHE C C N N 321 PHE O O N N 322 PHE CB C N N 323 PHE CG C Y N 324 PHE CD1 C Y N 325 PHE CD2 C Y N 326 PHE CE1 C Y N 327 PHE CE2 C Y N 328 PHE CZ C Y N 329 PHE OXT O N N 330 PHE H H N N 331 PHE H2 H N N 332 PHE HA H N N 333 PHE HB2 H N N 334 PHE HB3 H N N 335 PHE HD1 H N N 336 PHE HD2 H N N 337 PHE HE1 H N N 338 PHE HE2 H N N 339 PHE HZ H N N 340 PHE HXT H N N 341 PRO N N N N 342 PRO CA C N S 343 PRO C C N N 344 PRO O O N N 345 PRO CB C N N 346 PRO CG C N N 347 PRO CD C N N 348 PRO OXT O N N 349 PRO H H N N 350 PRO HA H N N 351 PRO HB2 H N N 352 PRO HB3 H N N 353 PRO HG2 H N N 354 PRO HG3 H N N 355 PRO HD2 H N N 356 PRO HD3 H N N 357 PRO HXT H N N 358 SER N N N N 359 SER CA C N S 360 SER C C N N 361 SER O O N N 362 SER CB C N N 363 SER OG O N N 364 SER OXT O N N 365 SER H H N N 366 SER H2 H N N 367 SER HA H N N 368 SER HB2 H N N 369 SER HB3 H N N 370 SER HG H N N 371 SER HXT H N N 372 THR N N N N 373 THR CA C N S 374 THR C C N N 375 THR O O N N 376 THR CB C N R 377 THR OG1 O N N 378 THR CG2 C N N 379 THR OXT O N N 380 THR H H N N 381 THR H2 H N N 382 THR HA H N N 383 THR HB H N N 384 THR HG1 H N N 385 THR HG21 H N N 386 THR HG22 H N N 387 THR HG23 H N N 388 THR HXT H N N 389 TYR N N N N 390 TYR CA C N S 391 TYR C C N N 392 TYR O O N N 393 TYR CB C N N 394 TYR CG C Y N 395 TYR CD1 C Y N 396 TYR CD2 C Y N 397 TYR CE1 C Y N 398 TYR CE2 C Y N 399 TYR CZ C Y N 400 TYR OH O N N 401 TYR OXT O N N 402 TYR H H N N 403 TYR H2 H N N 404 TYR HA H N N 405 TYR HB2 H N N 406 TYR HB3 H N N 407 TYR HD1 H N N 408 TYR HD2 H N N 409 TYR HE1 H N N 410 TYR HE2 H N N 411 TYR HH H N N 412 TYR HXT H N N 413 VAL N N N N 414 VAL CA C N S 415 VAL C C N N 416 VAL O O N N 417 VAL CB C N N 418 VAL CG1 C N N 419 VAL CG2 C N N 420 VAL OXT O N N 421 VAL H H N N 422 VAL H2 H N N 423 VAL HA H N N 424 VAL HB H N N 425 VAL HG11 H N N 426 VAL HG12 H N N 427 VAL HG13 H N N 428 VAL HG21 H N N 429 VAL HG22 H N N 430 VAL HG23 H N N 431 VAL HXT H N N 432 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DTU S1 C1 sing N N 83 DTU S1 H1 sing N N 84 DTU C1 C2 sing N N 85 DTU C1 H1C1 sing N N 86 DTU C1 H1C2 sing N N 87 DTU C2 O2 sing N N 88 DTU C2 C3 sing N N 89 DTU C2 H2 sing N N 90 DTU O2 HA sing N N 91 DTU C3 O3 sing N N 92 DTU C3 C4 sing N N 93 DTU C3 H3 sing N N 94 DTU O3 HB sing N N 95 DTU C4 S4 sing N N 96 DTU C4 H4C1 sing N N 97 DTU C4 H4C2 sing N N 98 DTU S4 H4 sing N N 99 GLN N CA sing N N 100 GLN N H sing N N 101 GLN N H2 sing N N 102 GLN CA C sing N N 103 GLN CA CB sing N N 104 GLN CA HA sing N N 105 GLN C O doub N N 106 GLN C OXT sing N N 107 GLN CB CG sing N N 108 GLN CB HB2 sing N N 109 GLN CB HB3 sing N N 110 GLN CG CD sing N N 111 GLN CG HG2 sing N N 112 GLN CG HG3 sing N N 113 GLN CD OE1 doub N N 114 GLN CD NE2 sing N N 115 GLN NE2 HE21 sing N N 116 GLN NE2 HE22 sing N N 117 GLN OXT HXT sing N N 118 GLU N CA sing N N 119 GLU N H sing N N 120 GLU N H2 sing N N 121 GLU CA C sing N N 122 GLU CA CB sing N N 123 GLU CA HA sing N N 124 GLU C O doub N N 125 GLU C OXT sing N N 126 GLU CB CG sing N N 127 GLU CB HB2 sing N N 128 GLU CB HB3 sing N N 129 GLU CG CD sing N N 130 GLU CG HG2 sing N N 131 GLU CG HG3 sing N N 132 GLU CD OE1 doub N N 133 GLU CD OE2 sing N N 134 GLU OE2 HE2 sing N N 135 GLU OXT HXT sing N N 136 GLY N CA sing N N 137 GLY N H sing N N 138 GLY N H2 sing N N 139 GLY CA C sing N N 140 GLY CA HA2 sing N N 141 GLY CA HA3 sing N N 142 GLY C O doub N N 143 GLY C OXT sing N N 144 GLY OXT HXT sing N N 145 GNP PG O1G doub N N 146 GNP PG O2G sing N N 147 GNP PG O3G sing N N 148 GNP PG N3B sing N N 149 GNP O2G HOG2 sing N N 150 GNP O3G HOG3 sing N N 151 GNP N3B PB sing N N 152 GNP N3B HNB3 sing N N 153 GNP PB O1B doub N N 154 GNP PB O2B sing N N 155 GNP PB O3A sing N N 156 GNP O2B HOB2 sing N N 157 GNP O3A PA sing N N 158 GNP PA O1A doub N N 159 GNP PA O2A sing N N 160 GNP PA "O5'" sing N N 161 GNP O2A HOA2 sing N N 162 GNP "O5'" "C5'" sing N N 163 GNP "C5'" "C4'" sing N N 164 GNP "C5'" "H5'2" sing N N 165 GNP "C5'" "H5'1" sing N N 166 GNP "C4'" "O4'" sing N N 167 GNP "C4'" "C3'" sing N N 168 GNP "C4'" "H4'" sing N N 169 GNP "O4'" "C1'" sing N N 170 GNP "C3'" "O3'" sing N N 171 GNP "C3'" "C2'" sing N N 172 GNP "C3'" "H3'" sing N N 173 GNP "O3'" "HO3'" sing N N 174 GNP "C2'" "O2'" sing N N 175 GNP "C2'" "C1'" sing N N 176 GNP "C2'" "H2'" sing N N 177 GNP "O2'" "HO2'" sing N N 178 GNP "C1'" N9 sing N N 179 GNP "C1'" "H1'" sing N N 180 GNP N9 C8 sing Y N 181 GNP N9 C4 sing Y N 182 GNP C8 N7 doub Y N 183 GNP C8 H8 sing N N 184 GNP N7 C5 sing Y N 185 GNP C5 C6 sing Y N 186 GNP C5 C4 doub Y N 187 GNP C6 O6 doub N N 188 GNP C6 N1 sing Y N 189 GNP N1 C2 sing Y N 190 GNP N1 HN1 sing N N 191 GNP C2 N2 sing N N 192 GNP C2 N3 doub Y N 193 GNP N2 HN21 sing N N 194 GNP N2 HN22 sing N N 195 GNP N3 C4 sing Y N 196 HIS N CA sing N N 197 HIS N H sing N N 198 HIS N H2 sing N N 199 HIS CA C sing N N 200 HIS CA CB sing N N 201 HIS CA HA sing N N 202 HIS C O doub N N 203 HIS C OXT sing N N 204 HIS CB CG sing N N 205 HIS CB HB2 sing N N 206 HIS CB HB3 sing N N 207 HIS CG ND1 sing Y N 208 HIS CG CD2 doub Y N 209 HIS ND1 CE1 doub Y N 210 HIS ND1 HD1 sing N N 211 HIS CD2 NE2 sing Y N 212 HIS CD2 HD2 sing N N 213 HIS CE1 NE2 sing Y N 214 HIS CE1 HE1 sing N N 215 HIS NE2 HE2 sing N N 216 HIS OXT HXT sing N N 217 HOH O H1 sing N N 218 HOH O H2 sing N N 219 ILE N CA sing N N 220 ILE N H sing N N 221 ILE N H2 sing N N 222 ILE CA C sing N N 223 ILE CA CB sing N N 224 ILE CA HA sing N N 225 ILE C O doub N N 226 ILE C OXT sing N N 227 ILE CB CG1 sing N N 228 ILE CB CG2 sing N N 229 ILE CB HB sing N N 230 ILE CG1 CD1 sing N N 231 ILE CG1 HG12 sing N N 232 ILE CG1 HG13 sing N N 233 ILE CG2 HG21 sing N N 234 ILE CG2 HG22 sing N N 235 ILE CG2 HG23 sing N N 236 ILE CD1 HD11 sing N N 237 ILE CD1 HD12 sing N N 238 ILE CD1 HD13 sing N N 239 ILE OXT HXT sing N N 240 LEU N CA sing N N 241 LEU N H sing N N 242 LEU N H2 sing N N 243 LEU CA C sing N N 244 LEU CA CB sing N N 245 LEU CA HA sing N N 246 LEU C O doub N N 247 LEU C OXT sing N N 248 LEU CB CG sing N N 249 LEU CB HB2 sing N N 250 LEU CB HB3 sing N N 251 LEU CG CD1 sing N N 252 LEU CG CD2 sing N N 253 LEU CG HG sing N N 254 LEU CD1 HD11 sing N N 255 LEU CD1 HD12 sing N N 256 LEU CD1 HD13 sing N N 257 LEU CD2 HD21 sing N N 258 LEU CD2 HD22 sing N N 259 LEU CD2 HD23 sing N N 260 LEU OXT HXT sing N N 261 LYS N CA sing N N 262 LYS N H sing N N 263 LYS N H2 sing N N 264 LYS CA C sing N N 265 LYS CA CB sing N N 266 LYS CA HA sing N N 267 LYS C O doub N N 268 LYS C OXT sing N N 269 LYS CB CG sing N N 270 LYS CB HB2 sing N N 271 LYS CB HB3 sing N N 272 LYS CG CD sing N N 273 LYS CG HG2 sing N N 274 LYS CG HG3 sing N N 275 LYS CD CE sing N N 276 LYS CD HD2 sing N N 277 LYS CD HD3 sing N N 278 LYS CE NZ sing N N 279 LYS CE HE2 sing N N 280 LYS CE HE3 sing N N 281 LYS NZ HZ1 sing N N 282 LYS NZ HZ2 sing N N 283 LYS NZ HZ3 sing N N 284 LYS OXT HXT sing N N 285 MET N CA sing N N 286 MET N H sing N N 287 MET N H2 sing N N 288 MET CA C sing N N 289 MET CA CB sing N N 290 MET CA HA sing N N 291 MET C O doub N N 292 MET C OXT sing N N 293 MET CB CG sing N N 294 MET CB HB2 sing N N 295 MET CB HB3 sing N N 296 MET CG SD sing N N 297 MET CG HG2 sing N N 298 MET CG HG3 sing N N 299 MET SD CE sing N N 300 MET CE HE1 sing N N 301 MET CE HE2 sing N N 302 MET CE HE3 sing N N 303 MET OXT HXT sing N N 304 PHE N CA sing N N 305 PHE N H sing N N 306 PHE N H2 sing N N 307 PHE CA C sing N N 308 PHE CA CB sing N N 309 PHE CA HA sing N N 310 PHE C O doub N N 311 PHE C OXT sing N N 312 PHE CB CG sing N N 313 PHE CB HB2 sing N N 314 PHE CB HB3 sing N N 315 PHE CG CD1 doub Y N 316 PHE CG CD2 sing Y N 317 PHE CD1 CE1 sing Y N 318 PHE CD1 HD1 sing N N 319 PHE CD2 CE2 doub Y N 320 PHE CD2 HD2 sing N N 321 PHE CE1 CZ doub Y N 322 PHE CE1 HE1 sing N N 323 PHE CE2 CZ sing Y N 324 PHE CE2 HE2 sing N N 325 PHE CZ HZ sing N N 326 PHE OXT HXT sing N N 327 PRO N CA sing N N 328 PRO N CD sing N N 329 PRO N H sing N N 330 PRO CA C sing N N 331 PRO CA CB sing N N 332 PRO CA HA sing N N 333 PRO C O doub N N 334 PRO C OXT sing N N 335 PRO CB CG sing N N 336 PRO CB HB2 sing N N 337 PRO CB HB3 sing N N 338 PRO CG CD sing N N 339 PRO CG HG2 sing N N 340 PRO CG HG3 sing N N 341 PRO CD HD2 sing N N 342 PRO CD HD3 sing N N 343 PRO OXT HXT sing N N 344 SER N CA sing N N 345 SER N H sing N N 346 SER N H2 sing N N 347 SER CA C sing N N 348 SER CA CB sing N N 349 SER CA HA sing N N 350 SER C O doub N N 351 SER C OXT sing N N 352 SER CB OG sing N N 353 SER CB HB2 sing N N 354 SER CB HB3 sing N N 355 SER OG HG sing N N 356 SER OXT HXT sing N N 357 THR N CA sing N N 358 THR N H sing N N 359 THR N H2 sing N N 360 THR CA C sing N N 361 THR CA CB sing N N 362 THR CA HA sing N N 363 THR C O doub N N 364 THR C OXT sing N N 365 THR CB OG1 sing N N 366 THR CB CG2 sing N N 367 THR CB HB sing N N 368 THR OG1 HG1 sing N N 369 THR CG2 HG21 sing N N 370 THR CG2 HG22 sing N N 371 THR CG2 HG23 sing N N 372 THR OXT HXT sing N N 373 TYR N CA sing N N 374 TYR N H sing N N 375 TYR N H2 sing N N 376 TYR CA C sing N N 377 TYR CA CB sing N N 378 TYR CA HA sing N N 379 TYR C O doub N N 380 TYR C OXT sing N N 381 TYR CB CG sing N N 382 TYR CB HB2 sing N N 383 TYR CB HB3 sing N N 384 TYR CG CD1 doub Y N 385 TYR CG CD2 sing Y N 386 TYR CD1 CE1 sing Y N 387 TYR CD1 HD1 sing N N 388 TYR CD2 CE2 doub Y N 389 TYR CD2 HD2 sing N N 390 TYR CE1 CZ doub Y N 391 TYR CE1 HE1 sing N N 392 TYR CE2 CZ sing Y N 393 TYR CE2 HE2 sing N N 394 TYR CZ OH sing N N 395 TYR OH HH sing N N 396 TYR OXT HXT sing N N 397 VAL N CA sing N N 398 VAL N H sing N N 399 VAL N H2 sing N N 400 VAL CA C sing N N 401 VAL CA CB sing N N 402 VAL CA HA sing N N 403 VAL C O doub N N 404 VAL C OXT sing N N 405 VAL CB CG1 sing N N 406 VAL CB CG2 sing N N 407 VAL CB HB sing N N 408 VAL CG1 HG11 sing N N 409 VAL CG1 HG12 sing N N 410 VAL CG1 HG13 sing N N 411 VAL CG2 HG21 sing N N 412 VAL CG2 HG22 sing N N 413 VAL CG2 HG23 sing N N 414 VAL OXT HXT sing N N 415 # _atom_sites.entry_id 3V4F _atom_sites.fract_transf_matrix[1][1] 0.011297 _atom_sites.fract_transf_matrix[1][2] 0.006522 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013044 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007459 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CA MG N O P S # loop_