HEADER UNKNOWN FUNCTION 14-DEC-11 3V4H TITLE CRYSTAL STRUCTURE OF A TYPE VI SECRETION SYSTEM EFFECTOR FROM YERSINIA TITLE 2 PESTIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 29-189; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: YERSINIA PESTIS; SOURCE 3 ORGANISM_TAXID: 632; SOURCE 4 STRAIN: CO92; SOURCE 5 GENE: Y1547, YPO2937, YP_2759; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 "MAGIC"; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR E.V.FILIPPOVA,A.HALAVATY,G.MINASOV,L.SHUVALOVA,I.DUBROVSKA,J.WINSOR, AUTHOR 2 L.PAPAZISI,W.F.ANDERSON,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS AUTHOR 3 DISEASES (CSGID) REVDAT 3 13-SEP-23 3V4H 1 SEQADV REVDAT 2 08-NOV-17 3V4H 1 REMARK REVDAT 1 28-DEC-11 3V4H 0 JRNL AUTH E.V.FILIPPOVA,A.HALAVATY,G.MINASOV,L.SHUVALOVA,I.DUBROVSKA, JRNL AUTH 2 J.WINSOR,L.PAPAZISI,W.F.ANDERSON, JRNL AUTH 3 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 4 (CSGID) JRNL TITL CRYSTAL STRUCTURE OF A TYPE VI SECRETION SYSTEM EFFECTOR JRNL TITL 2 FROM YERSINIA PESTIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.97 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 19150 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1042 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1227 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.84 REMARK 3 BIN R VALUE (WORKING SET) : 0.2860 REMARK 3 BIN FREE R VALUE SET COUNT : 62 REMARK 3 BIN FREE R VALUE : 0.2830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2088 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 26 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 65.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.29000 REMARK 3 B22 (A**2) : -3.29000 REMARK 3 B33 (A**2) : 4.93000 REMARK 3 B12 (A**2) : -1.64000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.209 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.193 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.169 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.904 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2148 ; 0.013 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1451 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2889 ; 1.631 ; 1.939 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3540 ; 0.877 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 254 ; 7.050 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 103 ;41.581 ;24.660 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 390 ;17.735 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ; 9.242 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 325 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2324 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 438 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 95 REMARK 3 ORIGIN FOR THE GROUP (A): 29.8688 0.8899 16.3185 REMARK 3 T TENSOR REMARK 3 T11: 0.2836 T22: 0.3057 REMARK 3 T33: 0.3612 T12: -0.0516 REMARK 3 T13: -0.2115 T23: 0.0177 REMARK 3 L TENSOR REMARK 3 L11: 3.0072 L22: 2.6540 REMARK 3 L33: 1.9174 L12: 0.1429 REMARK 3 L13: -0.3559 L23: 0.0312 REMARK 3 S TENSOR REMARK 3 S11: 0.1189 S12: -0.4023 S13: -0.2974 REMARK 3 S21: 0.1725 S22: -0.0433 S23: -0.8033 REMARK 3 S31: -0.0264 S32: 0.1810 S33: -0.0756 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 96 A 155 REMARK 3 ORIGIN FOR THE GROUP (A): 27.4832 5.4608 17.5084 REMARK 3 T TENSOR REMARK 3 T11: 0.1701 T22: 0.2403 REMARK 3 T33: 0.1763 T12: -0.0466 REMARK 3 T13: -0.1599 T23: -0.0156 REMARK 3 L TENSOR REMARK 3 L11: 2.9530 L22: 5.5272 REMARK 3 L33: 0.9655 L12: 1.2009 REMARK 3 L13: -0.2845 L23: -0.5173 REMARK 3 S TENSOR REMARK 3 S11: 0.0793 S12: -0.3600 S13: -0.0653 REMARK 3 S21: 0.2846 S22: 0.0358 S23: -0.2616 REMARK 3 S31: 0.0396 S32: 0.0041 S33: -0.1151 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4 B 95 REMARK 3 ORIGIN FOR THE GROUP (A): 15.7479 -25.7377 15.9096 REMARK 3 T TENSOR REMARK 3 T11: 0.3073 T22: 0.2462 REMARK 3 T33: 0.5250 T12: 0.0207 REMARK 3 T13: -0.1182 T23: 0.2525 REMARK 3 L TENSOR REMARK 3 L11: 2.6179 L22: 3.5707 REMARK 3 L33: 2.0808 L12: 0.6493 REMARK 3 L13: -0.7731 L23: -0.0920 REMARK 3 S TENSOR REMARK 3 S11: -0.1074 S12: -0.3171 S13: -0.9155 REMARK 3 S21: 0.4450 S22: -0.1381 S23: -0.6920 REMARK 3 S31: 0.1248 S32: 0.2871 S33: 0.2455 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 96 B 155 REMARK 3 ORIGIN FOR THE GROUP (A): 18.3296 -21.1362 17.7718 REMARK 3 T TENSOR REMARK 3 T11: 0.3881 T22: 0.1983 REMARK 3 T33: 0.4608 T12: -0.0200 REMARK 3 T13: -0.1536 T23: 0.2130 REMARK 3 L TENSOR REMARK 3 L11: 6.3294 L22: 1.6405 REMARK 3 L33: 1.7938 L12: 1.6465 REMARK 3 L13: -1.7968 L23: 0.6477 REMARK 3 S TENSOR REMARK 3 S11: 0.0312 S12: -0.2888 S13: -0.5231 REMARK 3 S21: 0.3141 S22: -0.0425 S23: -0.4877 REMARK 3 S31: 0.0297 S32: 0.2436 S33: 0.0113 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3V4H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-DEC-11. REMARK 100 THE DEPOSITION ID IS D_1000069583. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-AUG-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : SI-111 CHANNEL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20196 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 10.90 REMARK 200 R MERGE (I) : 0.04500 REMARK 200 R SYM (I) : 0.47300 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.7 REMARK 200 DATA REDUNDANCY IN SHELL : 8.80 REMARK 200 R MERGE FOR SHELL (I) : 0.57000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1Y12 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CITRIC ACID, 1.4 M AMMONIUM REMARK 280 SULFATE, 25% SUCROSE, PH 5.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 74.27500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 42.88269 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 27.52433 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 74.27500 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 42.88269 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 27.52433 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 74.27500 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 42.88269 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 27.52433 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 74.27500 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 42.88269 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 27.52433 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 74.27500 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 42.88269 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 27.52433 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 74.27500 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 42.88269 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 27.52433 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 85.76538 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 55.04867 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 85.76538 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 55.04867 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 85.76538 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 55.04867 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 85.76538 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 55.04867 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 85.76538 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 55.04867 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 85.76538 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 55.04867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -96.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 30280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 66450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -212.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 SER A -16 REMARK 465 SER A -15 REMARK 465 GLY A -14 REMARK 465 VAL A -13 REMARK 465 ASP A -12 REMARK 465 LEU A -11 REMARK 465 GLY A -10 REMARK 465 THR A -9 REMARK 465 GLU A -8 REMARK 465 ASN A -7 REMARK 465 LEU A -6 REMARK 465 TYR A -5 REMARK 465 PHE A -4 REMARK 465 GLN A -3 REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLN A 3 REMARK 465 SER A 38 REMARK 465 ASN A 39 REMARK 465 MET A 40 REMARK 465 HIS A 41 REMARK 465 SER A 42 REMARK 465 GLY A 43 REMARK 465 SER A 44 REMARK 465 GLY A 45 REMARK 465 GLY A 46 REMARK 465 GLY A 47 REMARK 465 SER A 48 REMARK 465 GLY A 49 REMARK 465 ALA A 89 REMARK 465 GLY A 90 REMARK 465 GLY A 91 REMARK 465 ASP A 92 REMARK 465 GLU A 118 REMARK 465 THR A 119 REMARK 465 GLU A 142 REMARK 465 GLY A 143 REMARK 465 HIS A 144 REMARK 465 LYS A 156 REMARK 465 ALA A 157 REMARK 465 ASN A 158 REMARK 465 MET A 159 REMARK 465 HIS A 160 REMARK 465 SER A 161 REMARK 465 MET B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 SER B -16 REMARK 465 SER B -15 REMARK 465 GLY B -14 REMARK 465 VAL B -13 REMARK 465 ASP B -12 REMARK 465 LEU B -11 REMARK 465 GLY B -10 REMARK 465 THR B -9 REMARK 465 GLU B -8 REMARK 465 ASN B -7 REMARK 465 LEU B -6 REMARK 465 TYR B -5 REMARK 465 PHE B -4 REMARK 465 GLN B -3 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 GLN B 3 REMARK 465 HIS B 37 REMARK 465 SER B 38 REMARK 465 ASN B 39 REMARK 465 MET B 40 REMARK 465 HIS B 41 REMARK 465 SER B 42 REMARK 465 GLY B 43 REMARK 465 SER B 44 REMARK 465 GLY B 45 REMARK 465 GLY B 46 REMARK 465 GLY B 47 REMARK 465 SER B 48 REMARK 465 GLY B 49 REMARK 465 GLY B 90 REMARK 465 GLY B 91 REMARK 465 ASP B 92 REMARK 465 GLU B 116 REMARK 465 ASP B 117 REMARK 465 ASN B 140 REMARK 465 ALA B 141 REMARK 465 GLU B 142 REMARK 465 GLY B 143 REMARK 465 HIS B 144 REMARK 465 LYS B 156 REMARK 465 ALA B 157 REMARK 465 ASN B 158 REMARK 465 MET B 159 REMARK 465 HIS B 160 REMARK 465 SER B 161 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 22 CE NZ REMARK 470 LYS A 50 CD CE NZ REMARK 470 GLN A 139 CG CD OE1 NE2 REMARK 470 LYS A 145 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 15 26.08 -141.48 REMARK 500 ASP A 103 70.53 55.95 REMARK 500 GLU A 116 56.36 -103.26 REMARK 500 THR B 119 -168.64 -72.89 REMARK 500 SER B 146 -133.89 -117.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP04141 RELATED DB: TARGETDB DBREF 3V4H A 1 161 UNP Q8CLE0 Q8CLE0_YERPE 29 189 DBREF 3V4H B 1 161 UNP Q8CLE0 Q8CLE0_YERPE 29 189 SEQADV 3V4H MET A -23 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H HIS A -22 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H HIS A -21 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H HIS A -20 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H HIS A -19 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H HIS A -18 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H HIS A -17 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H SER A -16 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H SER A -15 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H GLY A -14 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H VAL A -13 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H ASP A -12 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H LEU A -11 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H GLY A -10 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H THR A -9 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H GLU A -8 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H ASN A -7 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H LEU A -6 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H TYR A -5 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H PHE A -4 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H GLN A -3 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H SER A -2 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H ASN A -1 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H ALA A 0 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H MET B -23 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H HIS B -22 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H HIS B -21 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H HIS B -20 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H HIS B -19 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H HIS B -18 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H HIS B -17 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H SER B -16 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H SER B -15 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H GLY B -14 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H VAL B -13 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H ASP B -12 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H LEU B -11 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H GLY B -10 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H THR B -9 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H GLU B -8 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H ASN B -7 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H LEU B -6 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H TYR B -5 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H PHE B -4 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H GLN B -3 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H SER B -2 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H ASN B -1 UNP Q8CLE0 EXPRESSION TAG SEQADV 3V4H ALA B 0 UNP Q8CLE0 EXPRESSION TAG SEQRES 1 A 185 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 185 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA MET ALA SEQRES 3 A 185 GLN ASP MET PHE ILE LYS ILE ASP GLY ILE GLU GLY GLU SEQRES 4 A 185 SER LEU ASP ALA ASN HIS LYS ASN GLU ILE GLN VAL LEU SEQRES 5 A 185 ALA TRP ASN TRP ASP VAL ALA GLN HIS SER ASN MET HIS SEQRES 6 A 185 SER GLY SER GLY GLY GLY SER GLY LYS ALA SER VAL SER SEQRES 7 A 185 ASP PHE CYS PHE ALA HIS TYR ILE ASP LYS ALA SER PRO SEQRES 8 A 185 ASN LEU LEU SER TYR CYS LEU LEU GLY LYS HIS ILE LYS SEQRES 9 A 185 ASN VAL GLN PHE VAL LEU ARG LYS ALA GLY GLY ASP PRO SEQRES 10 A 185 LEU GLU TYR LEU THR ILE LYS PHE THR ASP VAL ILE ILE SEQRES 11 A 185 THR ARG VAL ASP MET ALA GLY SER LEU GLU ASP GLU THR SEQRES 12 A 185 ARG PRO ARG GLU GLU ILE ARG PHE SER PHE THR LYS MET SEQRES 13 A 185 THR GLN ASP TYR VAL MET GLN ASN ALA GLU GLY HIS LYS SEQRES 14 A 185 SER GLY VAL ILE SER ALA ASN TYR ASP VAL LYS ALA ASN SEQRES 15 A 185 MET HIS SER SEQRES 1 B 185 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 185 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA MET ALA SEQRES 3 B 185 GLN ASP MET PHE ILE LYS ILE ASP GLY ILE GLU GLY GLU SEQRES 4 B 185 SER LEU ASP ALA ASN HIS LYS ASN GLU ILE GLN VAL LEU SEQRES 5 B 185 ALA TRP ASN TRP ASP VAL ALA GLN HIS SER ASN MET HIS SEQRES 6 B 185 SER GLY SER GLY GLY GLY SER GLY LYS ALA SER VAL SER SEQRES 7 B 185 ASP PHE CYS PHE ALA HIS TYR ILE ASP LYS ALA SER PRO SEQRES 8 B 185 ASN LEU LEU SER TYR CYS LEU LEU GLY LYS HIS ILE LYS SEQRES 9 B 185 ASN VAL GLN PHE VAL LEU ARG LYS ALA GLY GLY ASP PRO SEQRES 10 B 185 LEU GLU TYR LEU THR ILE LYS PHE THR ASP VAL ILE ILE SEQRES 11 B 185 THR ARG VAL ASP MET ALA GLY SER LEU GLU ASP GLU THR SEQRES 12 B 185 ARG PRO ARG GLU GLU ILE ARG PHE SER PHE THR LYS MET SEQRES 13 B 185 THR GLN ASP TYR VAL MET GLN ASN ALA GLU GLY HIS LYS SEQRES 14 B 185 SER GLY VAL ILE SER ALA ASN TYR ASP VAL LYS ALA ASN SEQRES 15 B 185 MET HIS SER FORMUL 3 HOH *26(H2 O) HELIX 1 1 ALA A 65 GLY A 76 1 12 HELIX 2 2 ALA B 65 GLY B 76 1 12 CRYST1 148.550 148.550 82.573 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006732 0.003887 0.000000 0.00000 SCALE2 0.000000 0.007773 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012110 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 0.504605 -0.863349 -0.001507 -0.03803 1 MTRIX2 2 0.863345 0.504607 -0.002585 0.05680 1 MTRIX3 2 0.002992 0.000003 0.999996 0.01183 1