HEADER RIBOSOMAL PROTEIN/RNA 21-DEC-11 3V7E TITLE CRYSTAL STRUCTURE OF YBXF BOUND TO THE SAM-I RIBOSWITCH APTAMER COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBOSOME-ASSOCIATED PROTEIN L7AE-LIKE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: SAM-I RIBOSWITCH APTAMER WITH AN ENGINEERED HELIX P3; COMPND 7 CHAIN: C, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: BSU01090, RPLGB, YBAB, YBXF; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET16B; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: CALDANAEROBACTER SUBTERRANEUS SUBSP. SOURCE 13 TENGCONGENSIS; SOURCE 14 ORGANISM_TAXID: 119072; SOURCE 15 OTHER_DETAILS: RNA WAS PREPARED BY IN VITRO TRANSCRIPTION WITH T7 SOURCE 16 RNA POLYMERASE KEYWDS RNA-PROTEIN COMPLEX, RIBOSWITCH, K-TURN, L7AE-LIKE, A MEMBER OF THE KEYWDS 2 L7AE/L30E SUPERFAMILY, UNKNOWN FUNCTION, K-TURN MOTIF, RIBOSOMAL KEYWDS 3 PROTEIN-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR N.J.BAIRD,J.ZHANG,T.HAMMA,A.R.FERRE-D'AMARE REVDAT 3 13-SEP-23 3V7E 1 REMARK SEQADV LINK REVDAT 2 18-APR-12 3V7E 1 JRNL REVDAT 1 07-MAR-12 3V7E 0 JRNL AUTH N.J.BAIRD,J.ZHANG,T.HAMMA,A.R.FERRE-D'AMARE JRNL TITL YBXF AND YLXQ ARE BACTERIAL HOMOLOGS OF L7AE AND BIND JRNL TITL 2 K-TURNS BUT NOT K-LOOPS. JRNL REF RNA V. 18 759 2012 JRNL REFN ISSN 1355-8382 JRNL PMID 22355167 JRNL DOI 10.1261/RNA.031518.111 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.3 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.54 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 74723.320 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 93.4 REMARK 3 NUMBER OF REFLECTIONS : 22926 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2276 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.98 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 78.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2870 REMARK 3 BIN R VALUE (WORKING SET) : 0.4040 REMARK 3 BIN FREE R VALUE : 0.4510 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 320 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.025 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 962 REMARK 3 NUCLEIC ACID ATOMS : 5372 REMARK 3 HETEROGEN ATOMS : 202 REMARK 3 SOLVENT ATOMS : 15 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 121.2 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 75.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 25.12000 REMARK 3 B22 (A**2) : 7.19000 REMARK 3 B33 (A**2) : -32.32000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 15.88000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.40 REMARK 3 ESD FROM SIGMAA (A) : 0.64 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.49 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.79 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 18.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.730 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 3.520 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 5.580 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 4.990 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 6.870 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.25 REMARK 3 BSOL : 20.05 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 6 : SAM.PAR REMARK 3 PARAMETER FILE 7 : NCO.PAR REMARK 3 PARAMETER FILE 8 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : CARBOHYDRATE.TOP REMARK 3 TOPOLOGY FILE 6 : SAM.TOP REMARK 3 TOPOLOGY FILE 7 : NCO.TOP REMARK 3 TOPOLOGY FILE 8 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 3V7E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1000069688. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-MAY-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : DOUBLE-CRYSTAL, SI(111) LIQUID REMARK 200 N2 COOLED REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22926 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 116.200 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.09800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.460 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: M. JANNASCHII L7AE PROTEIN (PDB ID 1SDS, CHAIN A) REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 150 M RNA, 210 M YBXF, 10 MM MGCL2, 10 REMARK 280 MM SAM, 40 MM KCL, 20 MM HEPES-KOH, 1 MM SPERMINE, 1 MM COBALT REMARK 280 HEXAMMINE, AND 1 MM DTT, 100 MM POTASSIUM CACODYLATE PH 6.0, 200 REMARK 280 MM MGCL2 AND 25% (V/V) PEG400, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 294.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 95.88100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.15250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 95.88100 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 27.15250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -87.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -78.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 501 REMARK 465 GLY B 601 REMARK 465 ALA B 679 REMARK 465 ILE B 680 REMARK 465 ILE B 681 REMARK 465 LEU B 682 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 504 CG OD1 OD2 REMARK 470 LYS A 505 CG CD CE NZ REMARK 470 LYS A 510 CG CD CE NZ REMARK 470 LYS A 517 CG CD CE NZ REMARK 470 LYS A 521 CD CE NZ REMARK 470 LYS A 529 CG CD CE NZ REMARK 470 LYS A 535 CD CE NZ REMARK 470 ASP A 538 CG OD1 OD2 REMARK 470 LEU A 548 CG CD1 CD2 REMARK 470 ASP A 551 CG OD1 OD2 REMARK 470 GLU A 560 CG CD OE1 OE2 REMARK 470 LYS A 563 CD CE NZ REMARK 470 LYS A 564 CD CE NZ REMARK 470 LYS A 567 CD CE NZ REMARK 470 ILE A 571 CG1 CG2 CD1 REMARK 470 GLU A 572 CG CD OE1 OE2 REMARK 470 ILE A 581 CG1 CG2 CD1 REMARK 470 ASP B 604 CG OD1 OD2 REMARK 470 LYS B 605 CG CD CE NZ REMARK 470 VAL B 606 CG1 CG2 REMARK 470 GLN B 608 CG CD OE1 NE2 REMARK 470 LYS B 610 CD CE NZ REMARK 470 SER B 611 OG REMARK 470 ILE B 612 CG1 CG2 CD1 REMARK 470 ILE B 613 CG1 CD1 REMARK 470 ILE B 614 CG1 CG2 CD1 REMARK 470 LYS B 617 CG CD CE NZ REMARK 470 GLN B 618 CG CD OE1 NE2 REMARK 470 LYS B 621 CG CD CE NZ REMARK 470 LYS B 624 CG CD CE NZ REMARK 470 ARG B 625 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 629 CG CD CE NZ REMARK 470 GLU B 630 CG CD OE1 OE2 REMARK 470 VAL B 633 CG1 CG2 REMARK 470 LYS B 635 CG CD CE NZ REMARK 470 ASP B 638 CG OD1 OD2 REMARK 470 ILE B 640 CG1 CG2 CD1 REMARK 470 SER B 644 OG REMARK 470 LEU B 648 CG CD1 CD2 REMARK 470 GLU B 650 CG CD OE1 OE2 REMARK 470 ASP B 651 CG OD1 OD2 REMARK 470 GLN B 652 CD OE1 NE2 REMARK 470 ILE B 654 CD1 REMARK 470 SER B 655 OG REMARK 470 VAL B 656 CG1 CG2 REMARK 470 SER B 657 OG REMARK 470 VAL B 659 CG1 CG2 REMARK 470 GLU B 660 CG CD OE1 OE2 REMARK 470 SER B 661 OG REMARK 470 LYS B 663 CD CE NZ REMARK 470 LYS B 664 CD CE NZ REMARK 470 LEU B 665 CG CD1 CD2 REMARK 470 LYS B 667 CG CD CE NZ REMARK 470 ILE B 671 CG1 CG2 CD1 REMARK 470 GLU B 672 CG CD OE1 OE2 REMARK 470 A C 9 N9 C8 N7 C5 C6 N6 N1 REMARK 470 A C 9 C2 N3 C4 REMARK 470 A D 209 N9 C8 N7 C5 C6 N6 N1 REMARK 470 A D 209 C2 N3 C4 REMARK 470 A D 214 N9 C8 N7 C5 C6 N6 N1 REMARK 470 A D 214 C2 N3 C4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OP2 A C 10 N6 NCO C 905 2.18 REMARK 500 OP2 G D 306 O HOH D 504 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 U D 234 C4 U D 234 O4 0.098 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 G C 15 O3' - P - OP2 ANGL. DEV. = 7.0 DEGREES REMARK 500 G C 15 O5' - P - OP2 ANGL. DEV. = -5.7 DEGREES REMARK 500 G C 19 C2' - C3' - O3' ANGL. DEV. = 11.7 DEGREES REMARK 500 A C 24 O5' - P - OP1 ANGL. DEV. = -6.2 DEGREES REMARK 500 U C 34 C5' - C4' - C3' ANGL. DEV. = -10.1 DEGREES REMARK 500 G C 35 N9 - C1' - C2' ANGL. DEV. = 8.3 DEGREES REMARK 500 A D 220 C2' - C3' - O3' ANGL. DEV. = 10.2 DEGREES REMARK 500 A D 224 O5' - P - OP1 ANGL. DEV. = -5.8 DEGREES REMARK 500 A D 233 C2' - C3' - O3' ANGL. DEV. = 13.9 DEGREES REMARK 500 U D 234 C2' - C3' - O3' ANGL. DEV. = 10.2 DEGREES REMARK 500 U D 234 N1 - C2 - N3 ANGL. DEV. = 4.2 DEGREES REMARK 500 U D 234 C2 - N3 - C4 ANGL. DEV. = -6.8 DEGREES REMARK 500 U D 234 N3 - C4 - C5 ANGL. DEV. = 7.3 DEGREES REMARK 500 U D 234 C5 - C4 - O4 ANGL. DEV. = -5.6 DEGREES REMARK 500 A D 246 C2' - C3' - O3' ANGL. DEV. = 17.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 517 -71.18 -45.77 REMARK 500 LYS A 524 18.64 -68.03 REMARK 500 ARG A 525 32.18 -153.47 REMARK 500 ASP A 536 -16.47 -47.84 REMARK 500 GLN B 608 45.34 -175.16 REMARK 500 LYS B 610 -86.21 -91.47 REMARK 500 SER B 627 48.63 -85.86 REMARK 500 LYS B 629 -74.90 -89.63 REMARK 500 ASP B 636 -23.24 -150.00 REMARK 500 SER B 643 -52.16 -128.26 REMARK 500 SER B 644 3.67 -65.39 REMARK 500 LEU B 648 27.66 -73.96 REMARK 500 ALA B 649 -64.64 -141.18 REMARK 500 ALA B 668 34.23 -71.02 REMARK 500 CYS B 669 -20.83 -155.81 REMARK 500 GLU B 672 35.19 -83.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 A C 24 0.07 SIDE CHAIN REMARK 500 G C 28 0.06 SIDE CHAIN REMARK 500 G C 43 0.06 SIDE CHAIN REMARK 500 C C 44 0.06 SIDE CHAIN REMARK 500 A C 46 0.07 SIDE CHAIN REMARK 500 G C 90 0.05 SIDE CHAIN REMARK 500 A D 224 0.07 SIDE CHAIN REMARK 500 G D 243 0.05 SIDE CHAIN REMARK 500 C D 244 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 919 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G C 1 O5' REMARK 620 2 HOH C1003 O 61.0 REMARK 620 3 HOH D 501 O 152.7 107.8 REMARK 620 4 HOH D 502 O 83.1 93.0 123.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 924 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G C 18 O6 REMARK 620 2 HOH C1002 O 74.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 923 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH C1001 O REMARK 620 2 HOH C1004 O 101.7 REMARK 620 3 HOH C1005 O 169.2 75.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 415 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G D 218 O6 REMARK 620 2 HOH D 505 O 123.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 408 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH D 506 O REMARK 620 2 HOH D 507 O 71.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 414 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH D 503 O REMARK 620 2 HOH D 504 O 162.1 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO C 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO C 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO C 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO C 904 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO C 905 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO C 906 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO C 907 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO C 908 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO C 909 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO C 910 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO C 911 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO C 912 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAM C 913 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 914 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 917 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 918 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 919 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 920 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 921 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 922 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 923 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 924 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 926 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO D 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO D 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO D 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO D 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO D 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NCO D 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAM D 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 413 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 414 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 415 REMARK 800 REMARK 800 SITE_IDENTIFIER: EC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 416 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3V7Q RELATED DB: PDB DBREF 3V7E A 502 582 UNP P46350 RXL7_BACSU 2 82 DBREF 3V7E B 602 682 UNP P46350 RXL7_BACSU 2 82 DBREF 3V7E C 1 126 PDB 3V7E 3V7E 1 126 DBREF 3V7E D 201 326 PDB 3V7E 3V7E 201 326 SEQADV 3V7E GLY A 501 UNP P46350 EXPRESSION TAG SEQADV 3V7E GLY B 601 UNP P46350 EXPRESSION TAG SEQRES 1 A 82 GLY SER TYR ASP LYS VAL SER GLN ALA LYS SER ILE ILE SEQRES 2 A 82 ILE GLY THR LYS GLN THR VAL LYS ALA LEU LYS ARG GLY SEQRES 3 A 82 SER VAL LYS GLU VAL VAL VAL ALA LYS ASP ALA ASP PRO SEQRES 4 A 82 ILE LEU THR SER SER VAL VAL SER LEU ALA GLU ASP GLN SEQRES 5 A 82 GLY ILE SER VAL SER MET VAL GLU SER MET LYS LYS LEU SEQRES 6 A 82 GLY LYS ALA CYS GLY ILE GLU VAL GLY ALA ALA ALA VAL SEQRES 7 A 82 ALA ILE ILE LEU SEQRES 1 B 82 GLY SER TYR ASP LYS VAL SER GLN ALA LYS SER ILE ILE SEQRES 2 B 82 ILE GLY THR LYS GLN THR VAL LYS ALA LEU LYS ARG GLY SEQRES 3 B 82 SER VAL LYS GLU VAL VAL VAL ALA LYS ASP ALA ASP PRO SEQRES 4 B 82 ILE LEU THR SER SER VAL VAL SER LEU ALA GLU ASP GLN SEQRES 5 B 82 GLY ILE SER VAL SER MET VAL GLU SER MET LYS LYS LEU SEQRES 6 B 82 GLY LYS ALA CYS GLY ILE GLU VAL GLY ALA ALA ALA VAL SEQRES 7 B 82 ALA ILE ILE LEU SEQRES 1 C 126 G G C U U A U C A A G A G SEQRES 2 C 126 A G G U G G A G G G A C U SEQRES 3 C 126 G G C C C G A U G A A A C SEQRES 4 C 126 C C G G C A A C C A C U A SEQRES 5 C 126 G U C U A G C G U C A G C SEQRES 6 C 126 U U C G G C U G A C G C U SEQRES 7 C 126 A G G C U A G U G G U G C SEQRES 8 C 126 C A A U U C C U G C A G C SEQRES 9 C 126 G G A A A C G U U G A A A SEQRES 10 C 126 G A U G A G C C A SEQRES 1 D 126 G G C U U A U C A A G A G SEQRES 2 D 126 A G G U G G A G G G A C U SEQRES 3 D 126 G G C C C G A U G A A A C SEQRES 4 D 126 C C G G C A A C C A C U A SEQRES 5 D 126 G U C U A G C G U C A G C SEQRES 6 D 126 U U C G G C U G A C G C U SEQRES 7 D 126 A G G C U A G U G G U G C SEQRES 8 D 126 C A A U U C C U G C A G C SEQRES 9 D 126 G G A A A C G U U G A A A SEQRES 10 D 126 G A U G A G C C A HET NCO C 901 7 HET NCO C 902 7 HET NCO C 903 7 HET NCO C 904 7 HET NCO C 905 7 HET NCO C 906 7 HET NCO C 907 7 HET NCO C 908 7 HET NCO C 909 7 HET NCO C 910 7 HET NCO C 911 7 HET NCO C 912 7 HET SAM C 913 27 HET MG C 914 1 HET MG C 915 1 HET MG C 916 1 HET MG C 917 1 HET MG C 918 1 HET MG C 919 1 HET MG C 920 1 HET MG C 921 1 HET MG C 922 1 HET MG C 923 1 HET MG C 924 1 HET MG C 925 1 HET MG C 926 1 HET NCO D 401 7 HET NCO D 402 7 HET NCO D 403 7 HET NCO D 404 7 HET NCO D 405 7 HET NCO D 406 7 HET SAM D 407 27 HET MG D 408 1 HET MG D 409 1 HET MG D 410 1 HET MG D 411 1 HET MG D 412 1 HET MG D 413 1 HET MG D 414 1 HET MG D 415 1 HET MG D 416 1 HETNAM NCO COBALT HEXAMMINE(III) HETNAM SAM S-ADENOSYLMETHIONINE HETNAM MG MAGNESIUM ION FORMUL 5 NCO 18(CO H18 N6 3+) FORMUL 17 SAM 2(C15 H22 N6 O5 S) FORMUL 18 MG 22(MG 2+) FORMUL 47 HOH *15(H2 O) HELIX 1 1 SER A 502 ALA A 509 1 8 HELIX 2 2 GLY A 515 LYS A 524 1 10 HELIX 3 3 ASP A 538 GLY A 553 1 16 HELIX 4 4 SER A 561 CYS A 569 1 9 HELIX 5 5 TYR B 603 SER B 607 1 5 HELIX 6 6 GLY B 615 LEU B 623 1 9 HELIX 7 7 VAL B 646 ASP B 651 1 6 HELIX 8 8 LYS B 663 ALA B 668 1 6 SHEET 1 A 4 SER A 511 ILE A 514 0 SHEET 2 A 4 ALA A 577 ILE A 581 -1 O ALA A 579 N ILE A 513 SHEET 3 A 4 VAL A 528 ALA A 534 -1 N VAL A 532 O VAL A 578 SHEET 4 A 4 VAL A 556 VAL A 559 1 O SER A 557 N VAL A 531 SHEET 1 B 2 GLU B 630 VAL B 631 0 SHEET 2 B 2 SER B 655 VAL B 656 1 O SER B 655 N VAL B 631 LINK O5' G C 1 MG MG C 919 1555 1555 2.56 LINK O6 G C 18 MG MG C 924 1555 1555 1.97 LINK OP1 G C 100 MG MG C 918 1555 1555 1.91 LINK MG MG C 914 O HOH C1007 1555 1555 1.75 LINK MG MG C 919 O HOH C1003 1555 1555 2.13 LINK MG MG C 919 O HOH D 501 1555 1555 1.84 LINK MG MG C 919 O HOH D 502 1555 1555 2.22 LINK MG MG C 923 O HOH C1001 1555 1555 1.80 LINK MG MG C 923 O HOH C1004 1555 1555 2.30 LINK MG MG C 923 O HOH C1005 1555 1555 1.89 LINK MG MG C 924 O HOH C1002 1555 1555 2.42 LINK O5' G D 201 MG MG D 409 1555 1555 2.09 LINK O6 G D 213 MG MG D 412 1555 1555 2.80 LINK O6 G D 218 MG MG D 415 1555 1555 2.11 LINK OP1 G D 300 MG MG D 410 1555 1555 1.87 LINK OP2 A D 316 MG MG D 416 1555 1555 2.49 LINK O2 C D 324 MG MG D 413 1555 1555 2.73 LINK MG MG D 408 O HOH D 506 1555 1555 2.32 LINK MG MG D 408 O HOH D 507 1555 1555 1.75 LINK MG MG D 414 O HOH D 503 1555 1555 2.37 LINK MG MG D 414 O HOH D 504 1555 1555 2.48 LINK MG MG D 415 O HOH D 505 1555 1555 2.43 SITE 1 AC1 7 U C 4 U C 5 A C 6 A C 119 SITE 2 AC1 7 U C 120 G C 121 A C 122 SITE 1 AC2 5 G C 23 C C 25 U C 26 G C 27 SITE 2 AC2 5 G C 28 SITE 1 AC3 6 C C 59 G C 60 U C 61 G C 73 SITE 2 AC3 6 A C 74 NCO C 909 SITE 1 AC4 4 A C 45 A C 46 G C 87 G C 88 SITE 1 AC5 6 A C 10 G C 11 A C 12 A C 94 SITE 2 AC5 6 U C 95 U C 96 SITE 1 AC6 3 U C 113 G C 114 A C 115 SITE 1 AC7 8 A C 24 C C 25 U C 96 C C 98 SITE 2 AC7 8 U C 99 G C 100 A C 116 A C 117 SITE 1 AC8 3 C C 41 G C 42 G C 43 SITE 1 AC9 2 C C 59 NCO C 903 SITE 1 BC1 3 A C 46 A C 84 G C 85 SITE 1 BC2 5 G C 53 U C 54 A C 79 G C 80 SITE 2 BC2 5 G C 81 SITE 1 BC3 3 C C 62 A C 63 G C 64 SITE 1 BC4 8 U C 7 G C 11 A C 45 C C 47 SITE 2 BC4 8 U C 89 G C 90 U C 120 G C 121 SITE 1 BC5 4 G C 13 G C 42 C C 92 HOH C1007 SITE 1 BC6 1 A C 36 SITE 1 BC7 3 G C 100 C C 101 A C 102 SITE 1 BC8 4 G C 1 HOH C1003 HOH D 501 HOH D 502 SITE 1 BC9 1 G C 19 SITE 1 CC1 2 U C 83 A C 84 SITE 1 CC2 2 C C 104 G C 105 SITE 1 CC3 3 HOH C1001 HOH C1004 HOH C1005 SITE 1 CC4 4 G C 18 G C 19 G C 35 HOH C1002 SITE 1 CC5 2 C C 3 HOH C1006 SITE 1 CC6 5 U D 204 U D 205 A D 319 U D 320 SITE 2 CC6 5 G D 321 SITE 1 CC7 5 A D 210 G D 211 A D 294 U D 295 SITE 2 CC7 5 U D 296 SITE 1 CC8 6 A D 245 A D 246 U D 286 G D 287 SITE 2 CC8 6 G D 288 U D 289 SITE 1 CC9 7 G D 223 C D 225 U D 226 G D 227 SITE 2 CC9 7 G D 228 C D 229 HOH D 502 SITE 1 DC1 3 U D 313 G D 314 A D 315 SITE 1 DC2 4 C D 259 G D 260 U D 261 G D 273 SITE 1 DC3 11 U D 207 C D 208 G D 211 A D 245 SITE 2 DC3 11 A D 246 C D 247 U D 289 G D 290 SITE 3 DC3 11 C D 291 U D 320 G D 321 SITE 1 DC4 4 U D 299 G D 300 HOH D 506 HOH D 507 SITE 1 DC5 1 G D 201 SITE 1 DC6 1 G D 300 SITE 1 DC7 2 G D 213 G D 242 SITE 1 DC8 2 C D 203 C D 324 SITE 1 DC9 2 HOH D 503 HOH D 504 SITE 1 EC1 3 U D 217 G D 218 HOH D 505 SITE 1 EC2 1 A D 316 CRYST1 191.762 54.305 106.366 90.00 116.56 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005215 0.000000 0.002607 0.00000 SCALE2 0.000000 0.018415 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010511 0.00000