HEADER TRANSFERASE 23-DEC-11 3V90 TITLE STRUCTURE OF T82M GLYCOGENIN MUTANT TRUNCATED AT RESIDUE 270 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOGENIN-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-271; COMPND 5 SYNONYM: GN-1, GN1; COMPND 6 EC: 2.4.1.186; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 3 ORGANISM_COMMON: EUROPEAN RABBIT,JAPANESE WHITE RABBIT,DOMESTIC SOURCE 4 RABBIT,RABBITS; SOURCE 5 ORGANISM_TAXID: 9986; SOURCE 6 GENE: GYG, GYG1; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: ROSETTA(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.E.CARRIZO,J.M.ROMERO,F.M.ISSOGLIO,J.A.CURTINO REVDAT 3 28-FEB-24 3V90 1 REMARK SEQADV REVDAT 2 15-FEB-12 3V90 1 JRNL REVDAT 1 25-JAN-12 3V90 0 JRNL AUTH M.E.CARRIZO,J.M.ROMERO,F.M.ISSOGLIO,J.A.CURTINO JRNL TITL STRUCTURAL AND BIOCHEMICAL INSIGHT INTO GLYCOGENIN JRNL TITL 2 INACTIVATION BY THE GLYCOGENOSIS-CAUSING T82M MUTATION. JRNL REF FEBS LETT. V. 586 254 2012 JRNL REFN ISSN 0014-5793 JRNL PMID 22226635 JRNL DOI 10.1016/J.FEBSLET.2011.12.028 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.75 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 23279 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1253 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1682 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.21 REMARK 3 BIN R VALUE (WORKING SET) : 0.2310 REMARK 3 BIN FREE R VALUE SET COUNT : 83 REMARK 3 BIN FREE R VALUE : 0.2470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2064 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 13 REMARK 3 SOLVENT ATOMS : 113 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.03000 REMARK 3 B22 (A**2) : -0.86000 REMARK 3 B33 (A**2) : -0.17000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.153 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.140 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.087 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.009 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2127 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2894 ; 1.125 ; 1.945 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 258 ; 5.855 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 94 ;35.912 ;24.255 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 342 ;13.135 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;11.288 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 330 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1594 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1296 ; 0.628 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2104 ; 1.185 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 831 ; 1.473 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 790 ; 2.430 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3V90 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1000069746. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-AUG-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : D03B-MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.430 REMARK 200 MONOCHROMATOR : SILICIUM CURVED CRYSTAL, WITH REMARK 200 ASYMMETRIC 7.25 ANGLE CUT REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24591 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 25.750 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.16100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% PEGMME5000/0.2M AMMONIUM REMARK 280 SULFATE/SODIUM MES, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 29.29500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 51.39500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 59.50000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 29.29500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 51.39500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 59.50000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 29.29500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 51.39500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 59.50000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 29.29500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 51.39500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 59.50000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -102.79000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -207.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -102.79000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 119.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 -102.79000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 119.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 GLU A 233 REMARK 465 GLY A 234 REMARK 465 HIS A 235 REMARK 465 ASP A 236 REMARK 465 PRO A 237 REMARK 465 THR A 238 REMARK 465 VAL A 266 REMARK 465 GLN A 267 REMARK 465 ASP A 268 REMARK 465 THR A 269 REMARK 465 CYS A 270 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 177 92.19 63.95 REMARK 500 ASN A 187 66.44 -157.53 REMARK 500 ILE A 193 -3.64 -56.75 REMARK 500 THR A 240 26.97 -68.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1LL0 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RABBIT MUSCLE GLYCOGENIN REMARK 900 RELATED ID: 1LL2 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RABBIT MUSCLE GLYCOGENIN COMPLEXED WITH UDP- REMARK 900 GLUCOSE AND MANGANESE REMARK 900 RELATED ID: 1LL3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RABBIT MUSCLE GLYCOGENIN REMARK 900 RELATED ID: 1ZCT RELATED DB: PDB REMARK 900 STRUCTURE OF GLYCOGENIN TRUNCATED AT RESIDUE 270 IN A COMPLEX WITH REMARK 900 UDP REMARK 900 RELATED ID: 1ZCU RELATED DB: PDB REMARK 900 APO FORM OF THE 162S MUTANT OF GLYCOGENIN REMARK 900 RELATED ID: 1ZCV RELATED DB: PDB REMARK 900 APO FORM OF A MUTANT OF GLYCOGENIN IN WHICH ASP159 IS REPLACED BY REMARK 900 ASN REMARK 900 RELATED ID: 1ZCY RELATED DB: PDB REMARK 900 APO FORM OF A MUTANT OF GLYCOGENIN IN WHICH ASP159 IS REPLACED BY REMARK 900 SER REMARK 900 RELATED ID: 3V8Y RELATED DB: PDB REMARK 900 RELATED ID: 3V8Z RELATED DB: PDB REMARK 900 RELATED ID: 3V91 RELATED DB: PDB DBREF 3V90 A 0 270 UNP P13280 GLYG_RABIT 1 271 SEQADV 3V90 MET A -20 UNP P13280 EXPRESSION TAG SEQADV 3V90 GLY A -19 UNP P13280 EXPRESSION TAG SEQADV 3V90 SER A -18 UNP P13280 EXPRESSION TAG SEQADV 3V90 SER A -17 UNP P13280 EXPRESSION TAG SEQADV 3V90 HIS A -16 UNP P13280 EXPRESSION TAG SEQADV 3V90 HIS A -15 UNP P13280 EXPRESSION TAG SEQADV 3V90 HIS A -14 UNP P13280 EXPRESSION TAG SEQADV 3V90 HIS A -13 UNP P13280 EXPRESSION TAG SEQADV 3V90 HIS A -12 UNP P13280 EXPRESSION TAG SEQADV 3V90 HIS A -11 UNP P13280 EXPRESSION TAG SEQADV 3V90 SER A -10 UNP P13280 EXPRESSION TAG SEQADV 3V90 SER A -9 UNP P13280 EXPRESSION TAG SEQADV 3V90 GLY A -8 UNP P13280 EXPRESSION TAG SEQADV 3V90 LEU A -7 UNP P13280 EXPRESSION TAG SEQADV 3V90 VAL A -6 UNP P13280 EXPRESSION TAG SEQADV 3V90 PRO A -5 UNP P13280 EXPRESSION TAG SEQADV 3V90 ARG A -4 UNP P13280 EXPRESSION TAG SEQADV 3V90 GLY A -3 UNP P13280 EXPRESSION TAG SEQADV 3V90 SER A -2 UNP P13280 EXPRESSION TAG SEQADV 3V90 HIS A -1 UNP P13280 EXPRESSION TAG SEQADV 3V90 MET A 82 UNP P13280 THR 83 ENGINEERED MUTATION SEQRES 1 A 291 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 291 LEU VAL PRO ARG GLY SER HIS MET THR ASP GLN ALA PHE SEQRES 3 A 291 VAL THR LEU THR THR ASN ASP ALA TYR ALA LYS GLY ALA SEQRES 4 A 291 LEU VAL LEU GLY SER SER LEU LYS GLN HIS ARG THR SER SEQRES 5 A 291 ARG ARG LEU ALA VAL LEU THR THR PRO GLN VAL SER ASP SEQRES 6 A 291 THR MET ARG LYS ALA LEU GLU ILE VAL PHE ASP GLU VAL SEQRES 7 A 291 ILE THR VAL ASP ILE LEU ASP SER GLY ASP SER ALA HIS SEQRES 8 A 291 LEU THR LEU MET LYS ARG PRO GLU LEU GLY VAL MET LEU SEQRES 9 A 291 THR LYS LEU HIS CYS TRP SER LEU THR GLN TYR SER LYS SEQRES 10 A 291 CYS VAL PHE MET ASP ALA ASP THR LEU VAL LEU ALA ASN SEQRES 11 A 291 ILE ASP ASP LEU PHE GLU ARG GLU GLU LEU SER ALA ALA SEQRES 12 A 291 PRO ASP PRO GLY TRP PRO ASP CYS PHE ASN SER GLY VAL SEQRES 13 A 291 PHE VAL TYR GLN PRO SER VAL GLU THR TYR ASN GLN LEU SEQRES 14 A 291 LEU HIS VAL ALA SER GLU GLN GLY SER PHE ASP GLY GLY SEQRES 15 A 291 ASP GLN GLY LEU LEU ASN THR PHE PHE ASN SER TRP ALA SEQRES 16 A 291 THR THR ASP ILE ARG LYS HIS LEU PRO PHE ILE TYR ASN SEQRES 17 A 291 LEU SER SER ILE SER ILE TYR SER TYR LEU PRO ALA PHE SEQRES 18 A 291 LYS ALA PHE GLY ALA ASN ALA LYS VAL VAL HIS PHE LEU SEQRES 19 A 291 GLY GLN THR LYS PRO TRP ASN TYR THR TYR ASP THR LYS SEQRES 20 A 291 THR LYS SER VAL ARG SER GLU GLY HIS ASP PRO THR MET SEQRES 21 A 291 THR HIS PRO GLN PHE LEU ASN VAL TRP TRP ASP ILE PHE SEQRES 22 A 291 THR THR SER VAL VAL PRO LEU LEU GLN GLN PHE GLY LEU SEQRES 23 A 291 VAL GLN ASP THR CYS HET GOL A 301 6 HET GOL A 302 6 HET CL A 303 1 HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL 2(C3 H8 O3) FORMUL 4 CL CL 1- FORMUL 5 HOH *113(H2 O) HELIX 1 1 ASN A 11 HIS A 28 1 18 HELIX 2 2 SER A 43 PHE A 54 1 12 HELIX 3 3 ALA A 69 ARG A 76 1 8 HELIX 4 4 LEU A 79 LEU A 86 1 8 HELIX 5 5 HIS A 87 LEU A 91 5 5 HELIX 6 6 ILE A 110 ARG A 116 5 7 HELIX 7 7 SER A 141 GLY A 156 1 16 HELIX 8 8 GLY A 161 PHE A 170 1 10 HELIX 9 9 ASP A 177 HIS A 181 5 5 HELIX 10 10 PRO A 183 ASN A 187 5 5 HELIX 11 11 ILE A 191 TYR A 196 1 6 HELIX 12 12 TYR A 196 GLY A 204 1 9 HELIX 13 13 ALA A 205 ALA A 207 5 3 HELIX 14 14 LYS A 217 TYR A 221 5 5 HELIX 15 15 PRO A 242 SER A 255 1 14 HELIX 16 16 SER A 255 GLN A 261 1 7 SHEET 1 A 6 GLU A 56 THR A 59 0 SHEET 2 A 6 ARG A 33 THR A 38 1 N THR A 38 O ILE A 58 SHEET 3 A 6 GLN A 3 THR A 9 1 N PHE A 5 O ALA A 35 SHEET 4 A 6 LYS A 96 MET A 100 1 O MET A 100 N VAL A 6 SHEET 5 A 6 PHE A 131 TYR A 138 -1 O TYR A 138 N CYS A 97 SHEET 6 A 6 SER A 120 PRO A 123 -1 N ALA A 122 O ASN A 132 SHEET 1 B 3 THR A 104 VAL A 106 0 SHEET 2 B 3 VAL A 209 HIS A 211 -1 O VAL A 210 N LEU A 105 SHEET 3 B 3 LEU A 188 SER A 189 1 N LEU A 188 O HIS A 211 SHEET 1 C 2 TYR A 223 ASP A 224 0 SHEET 2 C 2 SER A 229 VAL A 230 -1 O SER A 229 N ASP A 224 CISPEP 1 GLU A 118 LEU A 119 0 -5.73 SITE 1 AC1 3 HIS A 28 ARG A 29 ASN A 109 SITE 1 AC2 7 ASP A 129 ASN A 167 ASN A 171 PHE A 203 SITE 2 AC2 7 HOH A 430 HOH A 435 HOH A 456 SITE 1 AC3 1 ILE A 178 CRYST1 58.590 102.790 119.000 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017068 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009729 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008403 0.00000