HEADER TRANSFERASE/ANTIBIOTIC 04-JAN-12 3VCY TITLE STRUCTURE OF MURA (UDP-N-ACETYLGLUCOSAMINE ENOLPYRUVYL TRANSFERASE), TITLE 2 FROM VIBRIO FISCHERI IN COMPLEX WITH SUBSTRATE UDP-N- TITLE 3 ACETYLGLUCOSAMINE AND THE DRUG FOSFOMYCIN. COMPND MOL_ID: 1; COMPND 2 MOLECULE: UDP-N-ACETYLGLUCOSAMINE 1-CARBOXYVINYLTRANSFERASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: ENOYLPYRUVATE TRANSFERASE, UDP-N-ACETYLGLUCOSAMINE COMPND 5 ENOLPYRUVYL TRANSFERASE, EPT; COMPND 6 EC: 2.5.1.7; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO FISCHERI; SOURCE 3 ORGANISM_TAXID: 388396; SOURCE 4 STRAIN: MJ11; SOURCE 5 GENE: MURA, VFMJ11_0391; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 STAR (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS MURA, FOSFOMYCIN, PEPTIDOGLYCAN, AMINO SUGAR AND NUCLEOTIDE SUGAR KEYWDS 2 METABOLISM, PEPTIDOGLYCAN BIOSYNTHESIS, CYTOSOL, TRANSFERASE- KEYWDS 3 ANTIBIOTIC COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.C.BENSEN,S.RODRIGUEZ,J.NIX,M.L.CUNNINGHAM,L.W.TARI REVDAT 4 13-SEP-23 3VCY 1 REMARK SEQADV LINK REVDAT 3 09-MAY-12 3VCY 1 HETSYN REVDAT 2 25-APR-12 3VCY 1 JRNL REVDAT 1 11-APR-12 3VCY 0 JRNL AUTH D.C.BENSEN,S.RODRIGUEZ,J.NIX,M.L.CUNNINGHAM,L.W.TARI JRNL TITL STRUCTURE OF MURA (UDP-N-ACETYLGLUCOSAMINE ENOLPYRUVYL JRNL TITL 2 TRANSFERASE) FROM VIBRIO FISCHERI IN COMPLEX WITH SUBSTRATE JRNL TITL 3 UDP-N-ACETYLGLUCOSAMINE AND THE DRUG FOSFOMYCIN. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 68 382 2012 JRNL REFN ESSN 1744-3091 JRNL PMID 22505403 JRNL DOI 10.1107/S1744309112006720 REMARK 2 REMARK 2 RESOLUTION. 1.93 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.93 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.90 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 3 NUMBER OF REFLECTIONS : 116204 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6151 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.93 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7642 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.72 REMARK 3 BIN R VALUE (WORKING SET) : 0.3390 REMARK 3 BIN FREE R VALUE SET COUNT : 433 REMARK 3 BIN FREE R VALUE : 0.3730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 12412 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 232 REMARK 3 SOLVENT ATOMS : 1171 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.44000 REMARK 3 B22 (A**2) : 0.14000 REMARK 3 B33 (A**2) : -0.29000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.66000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.189 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.179 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.137 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.781 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.903 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 12964 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 17625 ; 1.482 ; 1.990 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1726 ; 6.013 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 500 ;34.967 ;24.640 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2214 ;17.196 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 77 ;19.212 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2113 ; 0.100 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 9473 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3VCY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1000069888. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-OCT-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : CUSTOM-MADE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 122583 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.920 REMARK 200 RESOLUTION RANGE LOW (A) : 27.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.12600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3LTH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25 %(W/V) PEG 4000, 0.1 M BIS-TRIS PH REMARK 280 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298 K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 59.25500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 51300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -85.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 420 REMARK 465 ASP A 421 REMARK 465 LEU A 422 REMARK 465 LEU A 423 REMARK 465 GLU A 424 REMARK 465 HIS A 425 REMARK 465 HIS A 426 REMARK 465 HIS A 427 REMARK 465 HIS A 428 REMARK 465 HIS A 429 REMARK 465 HIS A 430 REMARK 465 ASP B 420 REMARK 465 ASP B 421 REMARK 465 LEU B 422 REMARK 465 LEU B 423 REMARK 465 GLU B 424 REMARK 465 HIS B 425 REMARK 465 HIS B 426 REMARK 465 HIS B 427 REMARK 465 HIS B 428 REMARK 465 HIS B 429 REMARK 465 HIS B 430 REMARK 465 ASP C 420 REMARK 465 ASP C 421 REMARK 465 LEU C 422 REMARK 465 LEU C 423 REMARK 465 GLU C 424 REMARK 465 HIS C 425 REMARK 465 HIS C 426 REMARK 465 HIS C 427 REMARK 465 HIS C 428 REMARK 465 HIS C 429 REMARK 465 HIS C 430 REMARK 465 ASP D 420 REMARK 465 ASP D 421 REMARK 465 LEU D 422 REMARK 465 LEU D 423 REMARK 465 GLU D 424 REMARK 465 HIS D 425 REMARK 465 HIS D 426 REMARK 465 HIS D 427 REMARK 465 HIS D 428 REMARK 465 HIS D 429 REMARK 465 HIS D 430 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CG1 ILE C 73 O HOH C 738 2.10 REMARK 500 ND2 ASN C 331 O HOH C 633 2.10 REMARK 500 NZ LYS D 319 O HOH D 768 2.11 REMARK 500 OD1 ASP B 370 O HOH B 825 2.14 REMARK 500 OD1 ASP A 357 O HOH A 802 2.16 REMARK 500 OG SER D 321 O HOH D 833 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 260 CA - CB - CG ANGL. DEV. = 17.5 DEGREES REMARK 500 LEU B 260 CA - CB - CG ANGL. DEV. = 16.1 DEGREES REMARK 500 LEU C 260 CA - CB - CG ANGL. DEV. = 16.0 DEGREES REMARK 500 LEU D 260 CA - CB - CG ANGL. DEV. = 15.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 68 -87.40 -137.53 REMARK 500 ASN A 79 15.51 -140.86 REMARK 500 LEU A 260 44.67 -145.48 REMARK 500 ASN B 68 83.35 130.19 REMARK 500 LEU B 260 42.15 -145.56 REMARK 500 ILE B 328 -63.69 -94.07 REMARK 500 ASN C 68 -96.77 -138.60 REMARK 500 ASN C 79 4.66 -150.74 REMARK 500 LEU C 260 41.08 -144.16 REMARK 500 ASP C 279 29.73 -143.57 REMARK 500 THR C 369 -32.08 -134.81 REMARK 500 LYS C 402 61.09 39.88 REMARK 500 ASN D 68 89.91 176.79 REMARK 500 ASN D 79 11.09 -142.01 REMARK 500 MET D 91 102.84 -163.38 REMARK 500 LEU D 260 49.55 -150.29 REMARK 500 ILE D 328 -60.89 -95.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG A 67 ASN A 68 125.98 REMARK 500 ARG C 67 ASN C 68 141.55 REMARK 500 ARG D 67 ASN D 68 145.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 THE UNBOUND FORM OF THE ANTIBIOTIC IS FOSFOMYCIN. UPON REACTION REMARK 600 WITH PROTEIN, IT COVALENTLY BINDS TO CYS116. FFQ REPRESENTS THE REMARK 600 BOUND FORM OF FOSFOMYCIN. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FFQ A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UD1 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FFQ B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UD1 B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FFQ C 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UD1 C 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 C 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FFQ D 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UD1 D 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 D 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 503 REMARK 999 REMARK 999 SEQUENCE REMARK 999 AUTHOR STATES THAT THE AMINO ACID CHANGE AT THIS POSITION WAS THE REMARK 999 RESULT OF A RESTRICTION ENZYME SCAR FROM THE CLONING SCHEME DBREF 3VCY A 1 422 UNP B5F9P4 MURA_VIBFM 1 422 DBREF 3VCY B 1 422 UNP B5F9P4 MURA_VIBFM 1 422 DBREF 3VCY C 1 422 UNP B5F9P4 MURA_VIBFM 1 422 DBREF 3VCY D 1 422 UNP B5F9P4 MURA_VIBFM 1 422 SEQADV 3VCY ASP A 2 UNP B5F9P4 TYR 2 SEE REMARK 999 SEQADV 3VCY LEU A 423 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY GLU A 424 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY HIS A 425 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY HIS A 426 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY HIS A 427 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY HIS A 428 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY HIS A 429 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY HIS A 430 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY ASP B 2 UNP B5F9P4 TYR 2 SEE REMARK 999 SEQADV 3VCY LEU B 423 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY GLU B 424 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY HIS B 425 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY HIS B 426 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY HIS B 427 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY HIS B 428 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY HIS B 429 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY HIS B 430 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY ASP C 2 UNP B5F9P4 TYR 2 SEE REMARK 999 SEQADV 3VCY LEU C 423 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY GLU C 424 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY HIS C 425 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY HIS C 426 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY HIS C 427 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY HIS C 428 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY HIS C 429 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY HIS C 430 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY ASP D 2 UNP B5F9P4 TYR 2 SEE REMARK 999 SEQADV 3VCY LEU D 423 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY GLU D 424 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY HIS D 425 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY HIS D 426 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY HIS D 427 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY HIS D 428 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY HIS D 429 UNP B5F9P4 EXPRESSION TAG SEQADV 3VCY HIS D 430 UNP B5F9P4 EXPRESSION TAG SEQRES 1 A 430 MET ASP LYS PHE ARG ILE GLN GLY SER ASP LYS PRO LEU SEQRES 2 A 430 SER GLY GLU VAL THR ILE SER GLY ALA LYS ASN ALA ALA SEQRES 3 A 430 LEU PRO ILE LEU PHE ALA SER LEU LEU ALA GLU GLU PRO SEQRES 4 A 430 VAL GLU VAL ALA ASN VAL PRO LYS LEU ARG ASP VAL ASP SEQRES 5 A 430 THR THR MET GLU LEU LEU LYS ARG LEU GLY ALA GLU VAL SEQRES 6 A 430 SER ARG ASN GLY SER VAL HIS ILE ASP ALA SER GLY VAL SEQRES 7 A 430 ASN ASP PHE CYS ALA PRO TYR ASP LEU VAL LYS THR MET SEQRES 8 A 430 ARG ALA SER ILE TRP ALA LEU GLY PRO LEU VAL ALA ARG SEQRES 9 A 430 PHE GLY LYS GLY GLN VAL SER LEU PRO GLY GLY CYS ALA SEQRES 10 A 430 ILE GLY ALA ARG PRO VAL ASP LEU HIS ILE HIS GLY LEU SEQRES 11 A 430 GLU GLN LEU GLY ALA THR ILE LYS LEU GLU GLU GLY TYR SEQRES 12 A 430 VAL LYS ALA GLU VAL ASP GLY ARG LEU LYS GLY ALA HIS SEQRES 13 A 430 ILE VAL MET ASP LYS VAL SER VAL GLY ALA THR ILE THR SEQRES 14 A 430 VAL MET CYS ALA ALA THR LEU ALA GLU GLY THR THR VAL SEQRES 15 A 430 LEU GLU ASN ALA ALA ARG GLU PRO GLU ILE VAL ASP THR SEQRES 16 A 430 ALA ASN PHE LEU ASN ALA ILE GLY ALA LYS VAL SER GLY SEQRES 17 A 430 MET GLY THR ASP THR ILE THR ILE GLU GLY VAL GLU ARG SEQRES 18 A 430 LEU GLY GLY GLY TYR HIS GLU VAL VAL ALA ASP ARG ILE SEQRES 19 A 430 GLU THR GLY THR PHE LEU VAL ALA ALA ALA VAL SER GLY SEQRES 20 A 430 GLY LYS ILE VAL CYS LYS ASN THR LYS ALA HIS LEU LEU SEQRES 21 A 430 GLU ALA VAL LEU ALA LYS LEU GLU GLU ALA GLY ALA ASP SEQRES 22 A 430 VAL GLN THR GLY ASP ASP TRP ILE SER LEU ASP MET THR SEQRES 23 A 430 GLY ARG GLU LEU LYS ALA VAL ASN ILE ARG THR ALA PRO SEQRES 24 A 430 HIS PRO ALA PHE PRO THR ASP MET GLN ALA GLN PHE THR SEQRES 25 A 430 LEU LEU ASN MET MET ALA LYS GLY SER GLY ILE ILE THR SEQRES 26 A 430 GLU THR ILE PHE GLU ASN ARG PHE MET HIS ILE PRO GLU SEQRES 27 A 430 LEU GLN ARG MET GLY ALA HIS ALA GLU ILE GLU GLY ASN SEQRES 28 A 430 THR ALA ILE CYS GLY ASP THR ASP GLY LEU SER GLY ALA SEQRES 29 A 430 GLN VAL MET ALA THR ASP LEU ARG ALA SER ALA SER LEU SEQRES 30 A 430 VAL ILE ALA GLY CYS ILE ALA LYS GLY GLU THR ILE VAL SEQRES 31 A 430 ASP ARG ILE TYR HIS ILE ASP ARG GLY TYR ASP LYS ILE SEQRES 32 A 430 GLU ASP LYS LEU THR ALA LEU GLY ALA ASN ILE GLU ARG SEQRES 33 A 430 VAL HIS SER ASP ASP LEU LEU GLU HIS HIS HIS HIS HIS SEQRES 34 A 430 HIS SEQRES 1 B 430 MET ASP LYS PHE ARG ILE GLN GLY SER ASP LYS PRO LEU SEQRES 2 B 430 SER GLY GLU VAL THR ILE SER GLY ALA LYS ASN ALA ALA SEQRES 3 B 430 LEU PRO ILE LEU PHE ALA SER LEU LEU ALA GLU GLU PRO SEQRES 4 B 430 VAL GLU VAL ALA ASN VAL PRO LYS LEU ARG ASP VAL ASP SEQRES 5 B 430 THR THR MET GLU LEU LEU LYS ARG LEU GLY ALA GLU VAL SEQRES 6 B 430 SER ARG ASN GLY SER VAL HIS ILE ASP ALA SER GLY VAL SEQRES 7 B 430 ASN ASP PHE CYS ALA PRO TYR ASP LEU VAL LYS THR MET SEQRES 8 B 430 ARG ALA SER ILE TRP ALA LEU GLY PRO LEU VAL ALA ARG SEQRES 9 B 430 PHE GLY LYS GLY GLN VAL SER LEU PRO GLY GLY CYS ALA SEQRES 10 B 430 ILE GLY ALA ARG PRO VAL ASP LEU HIS ILE HIS GLY LEU SEQRES 11 B 430 GLU GLN LEU GLY ALA THR ILE LYS LEU GLU GLU GLY TYR SEQRES 12 B 430 VAL LYS ALA GLU VAL ASP GLY ARG LEU LYS GLY ALA HIS SEQRES 13 B 430 ILE VAL MET ASP LYS VAL SER VAL GLY ALA THR ILE THR SEQRES 14 B 430 VAL MET CYS ALA ALA THR LEU ALA GLU GLY THR THR VAL SEQRES 15 B 430 LEU GLU ASN ALA ALA ARG GLU PRO GLU ILE VAL ASP THR SEQRES 16 B 430 ALA ASN PHE LEU ASN ALA ILE GLY ALA LYS VAL SER GLY SEQRES 17 B 430 MET GLY THR ASP THR ILE THR ILE GLU GLY VAL GLU ARG SEQRES 18 B 430 LEU GLY GLY GLY TYR HIS GLU VAL VAL ALA ASP ARG ILE SEQRES 19 B 430 GLU THR GLY THR PHE LEU VAL ALA ALA ALA VAL SER GLY SEQRES 20 B 430 GLY LYS ILE VAL CYS LYS ASN THR LYS ALA HIS LEU LEU SEQRES 21 B 430 GLU ALA VAL LEU ALA LYS LEU GLU GLU ALA GLY ALA ASP SEQRES 22 B 430 VAL GLN THR GLY ASP ASP TRP ILE SER LEU ASP MET THR SEQRES 23 B 430 GLY ARG GLU LEU LYS ALA VAL ASN ILE ARG THR ALA PRO SEQRES 24 B 430 HIS PRO ALA PHE PRO THR ASP MET GLN ALA GLN PHE THR SEQRES 25 B 430 LEU LEU ASN MET MET ALA LYS GLY SER GLY ILE ILE THR SEQRES 26 B 430 GLU THR ILE PHE GLU ASN ARG PHE MET HIS ILE PRO GLU SEQRES 27 B 430 LEU GLN ARG MET GLY ALA HIS ALA GLU ILE GLU GLY ASN SEQRES 28 B 430 THR ALA ILE CYS GLY ASP THR ASP GLY LEU SER GLY ALA SEQRES 29 B 430 GLN VAL MET ALA THR ASP LEU ARG ALA SER ALA SER LEU SEQRES 30 B 430 VAL ILE ALA GLY CYS ILE ALA LYS GLY GLU THR ILE VAL SEQRES 31 B 430 ASP ARG ILE TYR HIS ILE ASP ARG GLY TYR ASP LYS ILE SEQRES 32 B 430 GLU ASP LYS LEU THR ALA LEU GLY ALA ASN ILE GLU ARG SEQRES 33 B 430 VAL HIS SER ASP ASP LEU LEU GLU HIS HIS HIS HIS HIS SEQRES 34 B 430 HIS SEQRES 1 C 430 MET ASP LYS PHE ARG ILE GLN GLY SER ASP LYS PRO LEU SEQRES 2 C 430 SER GLY GLU VAL THR ILE SER GLY ALA LYS ASN ALA ALA SEQRES 3 C 430 LEU PRO ILE LEU PHE ALA SER LEU LEU ALA GLU GLU PRO SEQRES 4 C 430 VAL GLU VAL ALA ASN VAL PRO LYS LEU ARG ASP VAL ASP SEQRES 5 C 430 THR THR MET GLU LEU LEU LYS ARG LEU GLY ALA GLU VAL SEQRES 6 C 430 SER ARG ASN GLY SER VAL HIS ILE ASP ALA SER GLY VAL SEQRES 7 C 430 ASN ASP PHE CYS ALA PRO TYR ASP LEU VAL LYS THR MET SEQRES 8 C 430 ARG ALA SER ILE TRP ALA LEU GLY PRO LEU VAL ALA ARG SEQRES 9 C 430 PHE GLY LYS GLY GLN VAL SER LEU PRO GLY GLY CYS ALA SEQRES 10 C 430 ILE GLY ALA ARG PRO VAL ASP LEU HIS ILE HIS GLY LEU SEQRES 11 C 430 GLU GLN LEU GLY ALA THR ILE LYS LEU GLU GLU GLY TYR SEQRES 12 C 430 VAL LYS ALA GLU VAL ASP GLY ARG LEU LYS GLY ALA HIS SEQRES 13 C 430 ILE VAL MET ASP LYS VAL SER VAL GLY ALA THR ILE THR SEQRES 14 C 430 VAL MET CYS ALA ALA THR LEU ALA GLU GLY THR THR VAL SEQRES 15 C 430 LEU GLU ASN ALA ALA ARG GLU PRO GLU ILE VAL ASP THR SEQRES 16 C 430 ALA ASN PHE LEU ASN ALA ILE GLY ALA LYS VAL SER GLY SEQRES 17 C 430 MET GLY THR ASP THR ILE THR ILE GLU GLY VAL GLU ARG SEQRES 18 C 430 LEU GLY GLY GLY TYR HIS GLU VAL VAL ALA ASP ARG ILE SEQRES 19 C 430 GLU THR GLY THR PHE LEU VAL ALA ALA ALA VAL SER GLY SEQRES 20 C 430 GLY LYS ILE VAL CYS LYS ASN THR LYS ALA HIS LEU LEU SEQRES 21 C 430 GLU ALA VAL LEU ALA LYS LEU GLU GLU ALA GLY ALA ASP SEQRES 22 C 430 VAL GLN THR GLY ASP ASP TRP ILE SER LEU ASP MET THR SEQRES 23 C 430 GLY ARG GLU LEU LYS ALA VAL ASN ILE ARG THR ALA PRO SEQRES 24 C 430 HIS PRO ALA PHE PRO THR ASP MET GLN ALA GLN PHE THR SEQRES 25 C 430 LEU LEU ASN MET MET ALA LYS GLY SER GLY ILE ILE THR SEQRES 26 C 430 GLU THR ILE PHE GLU ASN ARG PHE MET HIS ILE PRO GLU SEQRES 27 C 430 LEU GLN ARG MET GLY ALA HIS ALA GLU ILE GLU GLY ASN SEQRES 28 C 430 THR ALA ILE CYS GLY ASP THR ASP GLY LEU SER GLY ALA SEQRES 29 C 430 GLN VAL MET ALA THR ASP LEU ARG ALA SER ALA SER LEU SEQRES 30 C 430 VAL ILE ALA GLY CYS ILE ALA LYS GLY GLU THR ILE VAL SEQRES 31 C 430 ASP ARG ILE TYR HIS ILE ASP ARG GLY TYR ASP LYS ILE SEQRES 32 C 430 GLU ASP LYS LEU THR ALA LEU GLY ALA ASN ILE GLU ARG SEQRES 33 C 430 VAL HIS SER ASP ASP LEU LEU GLU HIS HIS HIS HIS HIS SEQRES 34 C 430 HIS SEQRES 1 D 430 MET ASP LYS PHE ARG ILE GLN GLY SER ASP LYS PRO LEU SEQRES 2 D 430 SER GLY GLU VAL THR ILE SER GLY ALA LYS ASN ALA ALA SEQRES 3 D 430 LEU PRO ILE LEU PHE ALA SER LEU LEU ALA GLU GLU PRO SEQRES 4 D 430 VAL GLU VAL ALA ASN VAL PRO LYS LEU ARG ASP VAL ASP SEQRES 5 D 430 THR THR MET GLU LEU LEU LYS ARG LEU GLY ALA GLU VAL SEQRES 6 D 430 SER ARG ASN GLY SER VAL HIS ILE ASP ALA SER GLY VAL SEQRES 7 D 430 ASN ASP PHE CYS ALA PRO TYR ASP LEU VAL LYS THR MET SEQRES 8 D 430 ARG ALA SER ILE TRP ALA LEU GLY PRO LEU VAL ALA ARG SEQRES 9 D 430 PHE GLY LYS GLY GLN VAL SER LEU PRO GLY GLY CYS ALA SEQRES 10 D 430 ILE GLY ALA ARG PRO VAL ASP LEU HIS ILE HIS GLY LEU SEQRES 11 D 430 GLU GLN LEU GLY ALA THR ILE LYS LEU GLU GLU GLY TYR SEQRES 12 D 430 VAL LYS ALA GLU VAL ASP GLY ARG LEU LYS GLY ALA HIS SEQRES 13 D 430 ILE VAL MET ASP LYS VAL SER VAL GLY ALA THR ILE THR SEQRES 14 D 430 VAL MET CYS ALA ALA THR LEU ALA GLU GLY THR THR VAL SEQRES 15 D 430 LEU GLU ASN ALA ALA ARG GLU PRO GLU ILE VAL ASP THR SEQRES 16 D 430 ALA ASN PHE LEU ASN ALA ILE GLY ALA LYS VAL SER GLY SEQRES 17 D 430 MET GLY THR ASP THR ILE THR ILE GLU GLY VAL GLU ARG SEQRES 18 D 430 LEU GLY GLY GLY TYR HIS GLU VAL VAL ALA ASP ARG ILE SEQRES 19 D 430 GLU THR GLY THR PHE LEU VAL ALA ALA ALA VAL SER GLY SEQRES 20 D 430 GLY LYS ILE VAL CYS LYS ASN THR LYS ALA HIS LEU LEU SEQRES 21 D 430 GLU ALA VAL LEU ALA LYS LEU GLU GLU ALA GLY ALA ASP SEQRES 22 D 430 VAL GLN THR GLY ASP ASP TRP ILE SER LEU ASP MET THR SEQRES 23 D 430 GLY ARG GLU LEU LYS ALA VAL ASN ILE ARG THR ALA PRO SEQRES 24 D 430 HIS PRO ALA PHE PRO THR ASP MET GLN ALA GLN PHE THR SEQRES 25 D 430 LEU LEU ASN MET MET ALA LYS GLY SER GLY ILE ILE THR SEQRES 26 D 430 GLU THR ILE PHE GLU ASN ARG PHE MET HIS ILE PRO GLU SEQRES 27 D 430 LEU GLN ARG MET GLY ALA HIS ALA GLU ILE GLU GLY ASN SEQRES 28 D 430 THR ALA ILE CYS GLY ASP THR ASP GLY LEU SER GLY ALA SEQRES 29 D 430 GLN VAL MET ALA THR ASP LEU ARG ALA SER ALA SER LEU SEQRES 30 D 430 VAL ILE ALA GLY CYS ILE ALA LYS GLY GLU THR ILE VAL SEQRES 31 D 430 ASP ARG ILE TYR HIS ILE ASP ARG GLY TYR ASP LYS ILE SEQRES 32 D 430 GLU ASP LYS LEU THR ALA LEU GLY ALA ASN ILE GLU ARG SEQRES 33 D 430 VAL HIS SER ASP ASP LEU LEU GLU HIS HIS HIS HIS HIS SEQRES 34 D 430 HIS HET FFQ A 500 8 HET UD1 A 501 39 HET PO4 A 502 5 HET GOL A 503 6 HET UD1 B 501 39 HET FFQ B 500 8 HET PO4 B 502 5 HET GOL B 503 6 HET UD1 C 501 39 HET PO4 C 502 5 HET FFQ C 500 8 HET GOL C 503 6 HET UD1 D 501 39 HET PO4 D 502 5 HET GOL D 503 6 HET FFQ D 500 8 HETNAM FFQ [(1R)-1-HYDROXYPROPYL]PHOSPHONIC ACID HETNAM UD1 URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE HETNAM PO4 PHOSPHATE ION HETNAM GOL GLYCEROL HETSYN FFQ FOSFOMYCIN, BOUND FORM HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 FFQ 4(C3 H9 O4 P) FORMUL 6 UD1 4(C17 H27 N3 O17 P2) FORMUL 7 PO4 4(O4 P 3-) FORMUL 8 GOL 4(C3 H8 O3) FORMUL 21 HOH *1171(H2 O) HELIX 1 1 ALA A 22 SER A 33 1 12 HELIX 2 2 LEU A 34 ALA A 36 5 3 HELIX 3 3 LEU A 48 GLY A 62 1 15 HELIX 4 4 PRO A 84 MET A 91 1 8 HELIX 5 5 ARG A 92 TRP A 96 5 5 HELIX 6 6 ALA A 97 GLY A 106 1 10 HELIX 7 7 VAL A 123 LEU A 133 1 11 HELIX 8 8 SER A 163 THR A 175 1 13 HELIX 9 9 GLU A 189 ILE A 202 1 14 HELIX 10 10 ASP A 232 GLY A 247 1 16 HELIX 11 11 LYS A 256 LEU A 259 5 4 HELIX 12 12 LEU A 260 ALA A 270 1 11 HELIX 13 13 PRO A 304 ASP A 306 5 3 HELIX 14 14 MET A 307 ALA A 318 1 12 HELIX 15 15 MET A 334 MET A 342 1 9 HELIX 16 16 ASP A 370 ALA A 384 1 15 HELIX 17 17 ILE A 393 TYR A 400 1 8 HELIX 18 18 LYS A 402 ALA A 409 1 8 HELIX 19 19 ALA B 22 SER B 33 1 12 HELIX 20 20 LEU B 34 ALA B 36 5 3 HELIX 21 21 LEU B 48 LEU B 61 1 14 HELIX 22 22 PRO B 84 LYS B 89 1 6 HELIX 23 23 MET B 91 TRP B 96 5 6 HELIX 24 24 ALA B 97 GLY B 106 1 10 HELIX 25 25 VAL B 123 LEU B 133 1 11 HELIX 26 26 SER B 163 THR B 175 1 13 HELIX 27 27 GLU B 189 ILE B 202 1 14 HELIX 28 28 ASP B 232 GLY B 247 1 16 HELIX 29 29 LYS B 256 LEU B 259 5 4 HELIX 30 30 LEU B 260 ALA B 270 1 11 HELIX 31 31 PRO B 304 ASP B 306 5 3 HELIX 32 32 MET B 307 ALA B 318 1 12 HELIX 33 33 MET B 334 MET B 342 1 9 HELIX 34 34 ASP B 370 ALA B 384 1 15 HELIX 35 35 ILE B 393 ARG B 398 1 6 HELIX 36 36 LYS B 402 ALA B 409 1 8 HELIX 37 37 ALA C 22 SER C 33 1 12 HELIX 38 38 LEU C 34 ALA C 36 5 3 HELIX 39 39 LEU C 48 LEU C 61 1 14 HELIX 40 40 PRO C 84 LYS C 89 1 6 HELIX 41 41 THR C 90 TRP C 96 5 7 HELIX 42 42 ALA C 97 GLY C 106 1 10 HELIX 43 43 VAL C 123 GLN C 132 1 10 HELIX 44 44 SER C 163 THR C 175 1 13 HELIX 45 45 GLU C 189 ILE C 202 1 14 HELIX 46 46 ASP C 232 GLY C 247 1 16 HELIX 47 47 LYS C 256 LEU C 259 5 4 HELIX 48 48 LEU C 260 ALA C 270 1 11 HELIX 49 49 PRO C 304 ASP C 306 5 3 HELIX 50 50 MET C 307 ALA C 318 1 12 HELIX 51 51 MET C 334 MET C 342 1 9 HELIX 52 52 ASP C 370 ALA C 384 1 15 HELIX 53 53 ILE C 393 TYR C 400 1 8 HELIX 54 54 LYS C 402 ALA C 409 1 8 HELIX 55 55 ALA D 22 SER D 33 1 12 HELIX 56 56 LEU D 34 ALA D 36 5 3 HELIX 57 57 LEU D 48 GLY D 62 1 15 HELIX 58 58 PRO D 84 LYS D 89 1 6 HELIX 59 59 MET D 91 TRP D 96 5 6 HELIX 60 60 ALA D 97 GLY D 106 1 10 HELIX 61 61 VAL D 123 LEU D 133 1 11 HELIX 62 62 SER D 163 THR D 175 1 13 HELIX 63 63 GLU D 189 ILE D 202 1 14 HELIX 64 64 ASP D 232 SER D 246 1 15 HELIX 65 65 LYS D 256 LEU D 259 5 4 HELIX 66 66 LEU D 260 ALA D 270 1 11 HELIX 67 67 PRO D 304 ASP D 306 5 3 HELIX 68 68 MET D 307 ALA D 318 1 12 HELIX 69 69 MET D 334 MET D 342 1 9 HELIX 70 70 ASP D 370 ALA D 384 1 15 HELIX 71 71 ILE D 393 ARG D 398 1 6 HELIX 72 72 LYS D 402 ALA D 409 1 8 SHEET 1 A 4 GLN A 365 MET A 367 0 SHEET 2 A 4 GLU A 387 ASP A 391 1 O ILE A 389 N VAL A 366 SHEET 3 A 4 LYS A 3 GLN A 7 -1 N PHE A 4 O VAL A 390 SHEET 4 A 4 ASN A 413 VAL A 417 -1 O GLU A 415 N ARG A 5 SHEET 1 B 4 GLY A 15 THR A 18 0 SHEET 2 B 4 LYS A 249 LYS A 253 1 O LYS A 253 N VAL A 17 SHEET 3 B 4 TRP A 280 ASP A 284 -1 O ILE A 281 N CYS A 252 SHEET 4 B 4 ASP A 273 THR A 276 -1 N GLN A 275 O SER A 282 SHEET 1 C 4 GLU A 64 ARG A 67 0 SHEET 2 C 4 VAL A 71 ASP A 74 -1 O HIS A 72 N SER A 66 SHEET 3 C 4 VAL A 40 ALA A 43 -1 N VAL A 40 O ILE A 73 SHEET 4 C 4 GLY A 225 GLU A 228 1 O HIS A 227 N ALA A 43 SHEET 1 D 4 CYS A 82 ALA A 83 0 SHEET 2 D 4 LYS A 107 SER A 111 1 O GLN A 109 N ALA A 83 SHEET 3 D 4 TYR A 143 GLU A 147 -1 O ALA A 146 N GLY A 108 SHEET 4 D 4 THR A 136 GLU A 140 -1 N LYS A 138 O LYS A 145 SHEET 1 E 4 HIS A 156 VAL A 158 0 SHEET 2 E 4 THR A 180 GLU A 184 1 O GLU A 184 N ILE A 157 SHEET 3 E 4 THR A 213 GLU A 217 -1 O ILE A 216 N THR A 181 SHEET 4 E 4 VAL A 206 SER A 207 -1 N SER A 207 O THR A 215 SHEET 1 F 4 ILE A 295 ARG A 296 0 SHEET 2 F 4 GLY A 322 THR A 325 1 O THR A 325 N ILE A 295 SHEET 3 F 4 THR A 352 CYS A 355 -1 O CYS A 355 N GLY A 322 SHEET 4 F 4 ALA A 346 GLU A 349 -1 N GLU A 349 O THR A 352 SHEET 1 G 4 GLN B 365 MET B 367 0 SHEET 2 G 4 GLU B 387 ASP B 391 1 O ILE B 389 N VAL B 366 SHEET 3 G 4 LYS B 3 GLN B 7 -1 N ILE B 6 O THR B 388 SHEET 4 G 4 ASN B 413 VAL B 417 -1 O GLU B 415 N ARG B 5 SHEET 1 H 4 GLY B 15 THR B 18 0 SHEET 2 H 4 LYS B 249 LYS B 253 1 O LYS B 253 N VAL B 17 SHEET 3 H 4 TRP B 280 ASP B 284 -1 O ILE B 281 N CYS B 252 SHEET 4 H 4 ASP B 273 THR B 276 -1 N GLN B 275 O SER B 282 SHEET 1 I 4 GLU B 64 ARG B 67 0 SHEET 2 I 4 VAL B 71 ASP B 74 -1 O HIS B 72 N SER B 66 SHEET 3 I 4 VAL B 40 ALA B 43 -1 N VAL B 42 O VAL B 71 SHEET 4 I 4 GLY B 225 GLU B 228 1 O GLY B 225 N GLU B 41 SHEET 1 J 4 CYS B 82 ALA B 83 0 SHEET 2 J 4 LYS B 107 SER B 111 1 O GLN B 109 N ALA B 83 SHEET 3 J 4 TYR B 143 GLU B 147 -1 O ALA B 146 N GLY B 108 SHEET 4 J 4 THR B 136 GLU B 140 -1 N LYS B 138 O LYS B 145 SHEET 1 K 4 HIS B 156 VAL B 158 0 SHEET 2 K 4 THR B 180 GLU B 184 1 O GLU B 184 N ILE B 157 SHEET 3 K 4 THR B 213 GLU B 217 -1 O ILE B 216 N THR B 181 SHEET 4 K 4 VAL B 206 SER B 207 -1 N SER B 207 O THR B 215 SHEET 1 L 4 ILE B 295 ARG B 296 0 SHEET 2 L 4 GLY B 322 THR B 325 1 O ILE B 323 N ILE B 295 SHEET 3 L 4 THR B 352 CYS B 355 -1 O ALA B 353 N ILE B 324 SHEET 4 L 4 ALA B 346 GLU B 349 -1 N GLU B 347 O ILE B 354 SHEET 1 M 4 GLN C 365 MET C 367 0 SHEET 2 M 4 GLU C 387 ASP C 391 1 O ILE C 389 N VAL C 366 SHEET 3 M 4 LYS C 3 GLN C 7 -1 N ILE C 6 O THR C 388 SHEET 4 M 4 ASN C 413 VAL C 417 -1 O VAL C 417 N LYS C 3 SHEET 1 N 4 GLY C 15 THR C 18 0 SHEET 2 N 4 LYS C 249 LYS C 253 1 O LYS C 253 N VAL C 17 SHEET 3 N 4 TRP C 280 ASP C 284 -1 O ILE C 281 N CYS C 252 SHEET 4 N 4 ASP C 273 THR C 276 -1 N GLN C 275 O SER C 282 SHEET 1 O 4 GLU C 64 ARG C 67 0 SHEET 2 O 4 VAL C 71 ASP C 74 -1 O HIS C 72 N SER C 66 SHEET 3 O 4 VAL C 40 ALA C 43 -1 N VAL C 40 O ILE C 73 SHEET 4 O 4 GLY C 225 GLU C 228 1 O HIS C 227 N ALA C 43 SHEET 1 P 4 CYS C 82 ALA C 83 0 SHEET 2 P 4 LYS C 107 SER C 111 1 O GLN C 109 N ALA C 83 SHEET 3 P 4 TYR C 143 GLU C 147 -1 O VAL C 144 N VAL C 110 SHEET 4 P 4 THR C 136 GLU C 140 -1 N LYS C 138 O LYS C 145 SHEET 1 Q 4 HIS C 156 VAL C 158 0 SHEET 2 Q 4 THR C 180 GLU C 184 1 O GLU C 184 N ILE C 157 SHEET 3 Q 4 THR C 213 GLU C 217 -1 O ILE C 214 N LEU C 183 SHEET 4 Q 4 VAL C 206 SER C 207 -1 N SER C 207 O THR C 215 SHEET 1 R 4 ILE C 295 ARG C 296 0 SHEET 2 R 4 GLY C 322 THR C 325 1 O ILE C 323 N ILE C 295 SHEET 3 R 4 THR C 352 CYS C 355 -1 O CYS C 355 N GLY C 322 SHEET 4 R 4 ALA C 346 GLU C 349 -1 N GLU C 349 O THR C 352 SHEET 1 S 4 GLN D 365 MET D 367 0 SHEET 2 S 4 GLU D 387 ASP D 391 1 O ILE D 389 N VAL D 366 SHEET 3 S 4 LYS D 3 GLN D 7 -1 N PHE D 4 O VAL D 390 SHEET 4 S 4 ASN D 413 VAL D 417 -1 O GLU D 415 N ARG D 5 SHEET 1 T 4 GLY D 15 THR D 18 0 SHEET 2 T 4 LYS D 249 LYS D 253 1 O LYS D 253 N VAL D 17 SHEET 3 T 4 TRP D 280 ASP D 284 -1 O ILE D 281 N CYS D 252 SHEET 4 T 4 ASP D 273 GLY D 277 -1 N GLN D 275 O SER D 282 SHEET 1 U 4 GLU D 64 ARG D 67 0 SHEET 2 U 4 VAL D 71 ASP D 74 -1 O HIS D 72 N SER D 66 SHEET 3 U 4 VAL D 40 ALA D 43 -1 N VAL D 42 O VAL D 71 SHEET 4 U 4 GLY D 225 GLU D 228 1 O HIS D 227 N ALA D 43 SHEET 1 V 4 CYS D 82 ALA D 83 0 SHEET 2 V 4 LYS D 107 SER D 111 1 O GLN D 109 N ALA D 83 SHEET 3 V 4 TYR D 143 GLU D 147 -1 O VAL D 144 N VAL D 110 SHEET 4 V 4 THR D 136 GLU D 140 -1 N LYS D 138 O LYS D 145 SHEET 1 W 4 HIS D 156 VAL D 158 0 SHEET 2 W 4 THR D 180 GLU D 184 1 O GLU D 184 N ILE D 157 SHEET 3 W 4 THR D 213 GLU D 217 -1 O ILE D 214 N LEU D 183 SHEET 4 W 4 VAL D 206 SER D 207 -1 N SER D 207 O THR D 215 SHEET 1 X 4 ILE D 295 ARG D 296 0 SHEET 2 X 4 GLY D 322 THR D 325 1 O ILE D 323 N ILE D 295 SHEET 3 X 4 THR D 352 CYS D 355 -1 O ALA D 353 N ILE D 324 SHEET 4 X 4 ALA D 346 GLU D 349 -1 N GLU D 347 O ILE D 354 LINK SG CYS A 116 C1 FFQ A 500 1555 1555 1.80 LINK SG CYS B 116 C1 FFQ B 500 1555 1555 1.79 LINK SG CYS C 116 C1 FFQ C 500 1555 1555 1.77 LINK SG CYS D 116 C1 FFQ D 500 1555 1555 1.79 CISPEP 1 HIS A 300 PRO A 301 0 9.32 CISPEP 2 HIS B 300 PRO B 301 0 8.38 CISPEP 3 HIS C 300 PRO C 301 0 8.07 CISPEP 4 HIS D 300 PRO D 301 0 10.63 SITE 1 AC1 7 CYS A 116 ARG A 121 ARG A 398 PO4 A 502 SITE 2 AC1 7 HOH A 614 HOH A 617 HOH A 876 SITE 1 AC2 29 ASN A 24 TRP A 96 ALA A 120 ARG A 121 SITE 2 AC2 29 PRO A 122 VAL A 123 ASP A 124 LEU A 125 SITE 3 AC2 29 HIS A 126 SER A 163 VAL A 164 GLY A 165 SITE 4 AC2 29 THR A 305 ASP A 306 ILE A 328 PHE A 329 SITE 5 AC2 29 ARG A 332 PO4 A 502 GOL A 503 HOH A 603 SITE 6 AC2 29 HOH A 611 HOH A 613 HOH A 634 HOH A 648 SITE 7 AC2 29 HOH A 670 HOH A 804 HOH A 844 HOH A 868 SITE 8 AC2 29 HOH A 875 SITE 1 AC3 9 LYS A 23 ARG A 121 ARG A 398 FFQ A 500 SITE 2 AC3 9 UD1 A 501 GOL A 503 HOH A 617 HOH A 618 SITE 3 AC3 9 HOH A 781 SITE 1 AC4 8 ARG A 92 ALA A 93 ILE A 95 HIS A 126 SITE 2 AC4 8 GLY A 165 UD1 A 501 PO4 A 502 HOH A 613 SITE 1 AC5 6 ARG B 92 CYS B 116 ARG B 121 ARG B 398 SITE 2 AC5 6 HOH B 760 HOH B 850 SITE 1 AC6 28 LYS B 23 ASN B 24 TRP B 96 ALA B 120 SITE 2 AC6 28 ARG B 121 PRO B 122 VAL B 123 ASP B 124 SITE 3 AC6 28 LEU B 125 HIS B 126 SER B 163 VAL B 164 SITE 4 AC6 28 GLY B 165 THR B 305 ASP B 306 ILE B 328 SITE 5 AC6 28 PHE B 329 PO4 B 502 GOL B 503 HOH B 611 SITE 6 AC6 28 HOH B 618 HOH B 619 HOH B 632 HOH B 685 SITE 7 AC6 28 HOH B 695 HOH B 712 HOH B 746 HOH B 786 SITE 1 AC7 7 LYS B 23 ARG B 121 UD1 B 501 GOL B 503 SITE 2 AC7 7 HOH B 604 HOH B 727 HOH B 853 SITE 1 AC8 8 ARG B 92 ALA B 93 ILE B 95 TRP B 96 SITE 2 AC8 8 GLY B 165 UD1 B 501 PO4 B 502 HOH B 611 SITE 1 AC9 11 ARG C 92 GLY C 115 CYS C 116 ARG C 121 SITE 2 AC9 11 ARG C 398 PO4 C 502 HOH C 673 HOH C 756 SITE 3 AC9 11 HOH C 859 HOH C 877 HOH C 898 SITE 1 BC1 27 ASN C 24 TRP C 96 ALA C 120 ARG C 121 SITE 2 BC1 27 PRO C 122 VAL C 123 ASP C 124 LEU C 125 SITE 3 BC1 27 HIS C 126 SER C 163 VAL C 164 GLY C 165 SITE 4 BC1 27 THR C 305 ASP C 306 ILE C 328 PHE C 329 SITE 5 BC1 27 PO4 C 502 GOL C 503 HOH C 614 HOH C 625 SITE 6 BC1 27 HOH C 626 HOH C 627 HOH C 629 HOH C 630 SITE 7 BC1 27 HOH C 828 HOH C 876 HOH C 896 SITE 1 BC2 8 LYS C 23 ARG C 121 FFQ C 500 UD1 C 501 SITE 2 BC2 8 GOL C 503 HOH C 736 HOH C 862 HOH C 895 SITE 1 BC3 8 ARG C 92 ALA C 93 ILE C 95 HIS C 126 SITE 2 BC3 8 GLY C 165 UD1 C 501 PO4 C 502 HOH C 629 SITE 1 BC4 7 ARG D 92 CYS D 116 ARG D 121 ARG D 398 SITE 2 BC4 7 HOH D 602 HOH D 661 HOH D 920 SITE 1 BC5 26 ASN D 24 TRP D 96 ALA D 120 ARG D 121 SITE 2 BC5 26 PRO D 122 VAL D 123 ASP D 124 LEU D 125 SITE 3 BC5 26 HIS D 126 SER D 163 VAL D 164 GLY D 165 SITE 4 BC5 26 THR D 305 ASP D 306 ILE D 328 PHE D 329 SITE 5 BC5 26 PO4 D 502 GOL D 503 HOH D 616 HOH D 617 SITE 6 BC5 26 HOH D 621 HOH D 622 HOH D 629 HOH D 818 SITE 7 BC5 26 HOH D 849 HOH D 922 SITE 1 BC6 9 LYS D 23 ARG D 121 ARG D 398 UD1 D 501 SITE 2 BC6 9 GOL D 503 HOH D 601 HOH D 603 HOH D 716 SITE 3 BC6 9 HOH D 918 SITE 1 BC7 8 ARG D 92 ALA D 93 ILE D 95 ARG D 121 SITE 2 BC7 8 GLY D 165 UD1 D 501 PO4 D 502 HOH D 622 CRYST1 86.600 118.510 92.510 90.00 116.48 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011547 0.000000 0.005752 0.00000 SCALE2 0.000000 0.008438 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012077 0.00000