HEADER CELL ADHESION/PROTEIN BINDING 09-JAN-12 3VF0 TITLE RAVER1 IN COMPLEX WITH METAVINCULIN L954 DELETION MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: VINCULIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: METAVINCULIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: RIBONUCLEOPROTEIN PTB-BINDING 1; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: PROTEIN RAVER-1; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: VCL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: KIAA1978, RAVER1; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) KEYWDS CYTOSKELETAL F-ACTIN BINDING PROTEIN, RIBONUCLEOPROTEIN, CELL KEYWDS 2 ADHESION-PROTEIN BINDING COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.H.LEE,C.VONRHEIN,G.BRICOGNE,T.IZARD REVDAT 3 30-OCT-24 3VF0 1 REMARK SEQADV REVDAT 2 19-SEP-12 3VF0 1 JRNL REVDAT 1 25-JUL-12 3VF0 0 JRNL AUTH J.H.LEE,E.S.RANGARAJAN,C.VONRHEIN,G.BRICOGNE,T.IZARD JRNL TITL THE METAVINCULIN TAIL DOMAIN DIRECTS CONSTITUTIVE JRNL TITL 2 INTERACTIONS WITH RAVER1 AND VINCULIN RNA. JRNL REF J.MOL.BIOL. V. 422 697 2012 JRNL REFN ISSN 0022-2836 JRNL PMID 22709580 JRNL DOI 10.1016/J.JMB.2012.06.015 REMARK 2 REMARK 2 RESOLUTION. 2.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.13.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 27610 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1390 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 14 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.54 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.64 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.99 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2855 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1805 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2703 REMARK 3 BIN R VALUE (WORKING SET) : 0.1774 REMARK 3 BIN FREE R VALUE : 0.2367 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.32 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 152 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3584 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 93 REMARK 3 SOLVENT ATOMS : 254 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 55.75 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.09740 REMARK 3 B22 (A**2) : -2.09740 REMARK 3 B33 (A**2) : 4.19480 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.261 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.248 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3739 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5030 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1798 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 96 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 533 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3739 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 487 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : 6 ; 1.000 ; HARMONIC REMARK 3 UTILITY DISTANCES : 1 ; 1.000 ; HARMONIC REMARK 3 UTILITY ANGLES : 2 ; 1.000 ; HARMONIC REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4435 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.06 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.12 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 18.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: A 956 A 1133 REMARK 3 ORIGIN FOR THE GROUP (A): 55.1522 50.4110 -4.6739 REMARK 3 T TENSOR REMARK 3 T11: 0.0146 T22: -0.1075 REMARK 3 T33: -0.1119 T12: 0.0552 REMARK 3 T13: -0.0262 T23: -0.0104 REMARK 3 L TENSOR REMARK 3 L11: 2.1979 L22: 1.0363 REMARK 3 L33: 1.0838 L12: -0.1652 REMARK 3 L13: -0.6391 L23: -0.1680 REMARK 3 S TENSOR REMARK 3 S11: -0.0025 S12: 0.1049 S13: -0.0524 REMARK 3 S21: -0.0156 S22: -0.0652 S23: -0.0727 REMARK 3 S31: 0.1284 S32: 0.0125 S33: 0.0676 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: B 37 B 319 REMARK 3 ORIGIN FOR THE GROUP (A): 62.9936 83.9507 -39.2555 REMARK 3 T TENSOR REMARK 3 T11: -0.0817 T22: -0.0183 REMARK 3 T33: -0.0440 T12: -0.0242 REMARK 3 T13: -0.0210 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.1028 L22: 0.7794 REMARK 3 L33: 1.3101 L12: -0.0865 REMARK 3 L13: 0.0248 L23: -0.3895 REMARK 3 S TENSOR REMARK 3 S11: -0.0037 S12: 0.0240 S13: -0.0742 REMARK 3 S21: 0.0779 S22: 0.0110 S23: -0.0153 REMARK 3 S31: -0.1585 S32: 0.2344 S33: -0.0073 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3VF0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1000069962. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27610 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.540 REMARK 200 RESOLUTION RANGE LOW (A) : 35.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.39600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 34.19800 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 51.29700 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 17.09900 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 85.49500 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 68.39600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 34.19800 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 17.09900 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 51.29700 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 85.49500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE BIOLOGICAL UNIT IS A HETERODIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 82.45250 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 142.81192 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -51.29700 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 851 REMARK 465 SER A 852 REMARK 465 HIS A 853 REMARK 465 MET A 854 REMARK 465 ASP A 855 REMARK 465 GLU A 856 REMARK 465 LEU A 857 REMARK 465 ALA A 858 REMARK 465 PRO A 859 REMARK 465 PRO A 860 REMARK 465 LYS A 861 REMARK 465 PRO A 862 REMARK 465 PRO A 863 REMARK 465 LEU A 864 REMARK 465 PRO A 865 REMARK 465 GLU A 866 REMARK 465 GLY A 867 REMARK 465 GLU A 868 REMARK 465 VAL A 869 REMARK 465 PRO A 870 REMARK 465 PRO A 871 REMARK 465 PRO A 872 REMARK 465 ARG A 873 REMARK 465 PRO A 874 REMARK 465 PRO A 875 REMARK 465 PRO A 876 REMARK 465 PRO A 877 REMARK 465 GLU A 878 REMARK 465 GLU A 879 REMARK 465 LYS A 880 REMARK 465 ASP A 881 REMARK 465 GLU A 882 REMARK 465 GLU A 883 REMARK 465 PHE A 884 REMARK 465 PRO A 885 REMARK 465 GLU A 886 REMARK 465 GLN A 887 REMARK 465 LYS A 888 REMARK 465 ALA A 889 REMARK 465 GLY A 890 REMARK 465 GLU A 891 REMARK 465 VAL A 892 REMARK 465 ILE A 893 REMARK 465 ASN A 894 REMARK 465 GLN A 895 REMARK 465 PRO A 896 REMARK 465 MET A 897 REMARK 465 MET A 898 REMARK 465 MET A 899 REMARK 465 ALA A 900 REMARK 465 ALA A 901 REMARK 465 ARG A 902 REMARK 465 GLN A 903 REMARK 465 LEU A 904 REMARK 465 HIS A 905 REMARK 465 ASP A 906 REMARK 465 GLU A 907 REMARK 465 ALA A 908 REMARK 465 ARG A 909 REMARK 465 LYS A 910 REMARK 465 TRP A 911 REMARK 465 SER A 912 REMARK 465 SER A 913 REMARK 465 LYS A 914 REMARK 465 PRO A 915 REMARK 465 GLY A 916 REMARK 465 ILE A 917 REMARK 465 PRO A 918 REMARK 465 ALA A 919 REMARK 465 ALA A 920 REMARK 465 GLU A 921 REMARK 465 VAL A 922 REMARK 465 GLY A 923 REMARK 465 ILE A 924 REMARK 465 GLY A 925 REMARK 465 VAL A 926 REMARK 465 VAL A 927 REMARK 465 ALA A 928 REMARK 465 GLU A 929 REMARK 465 ALA A 930 REMARK 465 ASP A 931 REMARK 465 ALA A 932 REMARK 465 ALA A 933 REMARK 465 ASP A 934 REMARK 465 ALA A 935 REMARK 465 ALA A 936 REMARK 465 GLY A 937 REMARK 465 PHE A 938 REMARK 465 PRO A 939 REMARK 465 VAL A 940 REMARK 465 PRO A 941 REMARK 465 PRO A 942 REMARK 465 ASP A 943 REMARK 465 MET A 944 REMARK 465 GLU A 945 REMARK 465 ASP A 946 REMARK 465 ASP A 947 REMARK 465 TYR A 948 REMARK 465 GLU A 949 REMARK 465 PRO A 950 REMARK 465 GLU A 951 REMARK 465 LEU A 952 REMARK 465 LEU A 953 REMARK 465 LEU A 954 REMARK 465 MET A 955 REMARK 465 ARG B 320 REMARK 465 GLY B 321 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A1076 -2.79 -143.06 REMARK 500 ASN B 233 40.44 -144.88 REMARK 500 CYS B 251 100.91 -160.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPE A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 3001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 3002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 3003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 3004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 3005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 3006 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 3007 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 3008 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 3009 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 3010 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 3011 DBREF 3VF0 A 855 1133 UNP P18206 VINC_HUMAN 856 1134 DBREF 3VF0 B 39 321 UNP Q8IY67 RAVR1_HUMAN 39 321 SEQADV 3VF0 GLY A 851 UNP P18206 CLONING ARTIFACT SEQADV 3VF0 SER A 852 UNP P18206 CLONING ARTIFACT SEQADV 3VF0 HIS A 853 UNP P18206 CLONING ARTIFACT SEQADV 3VF0 MET A 854 UNP P18206 CLONING ARTIFACT SEQADV 3VF0 HIS B 37 UNP Q8IY67 CLONING ARTIFACT SEQADV 3VF0 MET B 38 UNP Q8IY67 CLONING ARTIFACT SEQRES 1 A 283 GLY SER HIS MET ASP GLU LEU ALA PRO PRO LYS PRO PRO SEQRES 2 A 283 LEU PRO GLU GLY GLU VAL PRO PRO PRO ARG PRO PRO PRO SEQRES 3 A 283 PRO GLU GLU LYS ASP GLU GLU PHE PRO GLU GLN LYS ALA SEQRES 4 A 283 GLY GLU VAL ILE ASN GLN PRO MET MET MET ALA ALA ARG SEQRES 5 A 283 GLN LEU HIS ASP GLU ALA ARG LYS TRP SER SER LYS PRO SEQRES 6 A 283 GLY ILE PRO ALA ALA GLU VAL GLY ILE GLY VAL VAL ALA SEQRES 7 A 283 GLU ALA ASP ALA ALA ASP ALA ALA GLY PHE PRO VAL PRO SEQRES 8 A 283 PRO ASP MET GLU ASP ASP TYR GLU PRO GLU LEU LEU LEU SEQRES 9 A 283 MET PRO SER ASN GLN PRO VAL ASN GLN PRO ILE LEU ALA SEQRES 10 A 283 ALA ALA GLN SER LEU HIS ARG GLU ALA THR LYS TRP SER SEQRES 11 A 283 SER LYS GLY ASN ASP ILE ILE ALA ALA ALA LYS ARG MET SEQRES 12 A 283 ALA LEU LEU MET ALA GLU MET SER ARG LEU VAL ARG GLY SEQRES 13 A 283 GLY SER GLY THR LYS ARG ALA LEU ILE GLN CYS ALA LYS SEQRES 14 A 283 ASP ILE ALA LYS ALA SER ASP GLU VAL THR ARG LEU ALA SEQRES 15 A 283 LYS GLU VAL ALA LYS GLN CYS THR ASP LYS ARG ILE ARG SEQRES 16 A 283 THR ASN LEU LEU GLN VAL CYS GLU ARG ILE PRO THR ILE SEQRES 17 A 283 SER THR GLN LEU LYS ILE LEU SER THR VAL LYS ALA THR SEQRES 18 A 283 MET LEU GLY ARG THR ASN ILE SER ASP GLU GLU SER GLU SEQRES 19 A 283 GLN ALA THR GLU MET LEU VAL HIS ASN ALA GLN ASN LEU SEQRES 20 A 283 MET GLN SER VAL LYS GLU THR VAL ARG GLU ALA GLU ALA SEQRES 21 A 283 ALA SER ILE LYS ILE ARG THR ASP ALA GLY PHE THR LEU SEQRES 22 A 283 ARG TRP VAL ARG LYS THR PRO TRP TYR GLN SEQRES 1 B 285 HIS MET LEU ASP PRO GLU GLU ILE ARG LYS ARG LEU GLU SEQRES 2 B 285 HIS THR GLU ARG GLN PHE ARG ASN ARG ARG LYS ILE LEU SEQRES 3 B 285 ILE ARG GLY LEU PRO GLY ASP VAL THR ASN GLN GLU VAL SEQRES 4 B 285 HIS ASP LEU LEU SER ASP TYR GLU LEU LYS TYR CYS PHE SEQRES 5 B 285 VAL ASP LYS TYR LYS GLY THR ALA PHE VAL THR LEU LEU SEQRES 6 B 285 ASN GLY GLU GLN ALA GLU ALA ALA ILE ASN ALA PHE HIS SEQRES 7 B 285 GLN SER ARG LEU ARG GLU ARG GLU LEU SER VAL GLN LEU SEQRES 8 B 285 GLN PRO THR ASP ALA LEU LEU CYS VAL ALA ASN LEU PRO SEQRES 9 B 285 PRO SER LEU THR GLN GLN GLN PHE GLU GLU LEU VAL ARG SEQRES 10 B 285 PRO PHE GLY SER LEU GLU ARG CYS PHE LEU VAL TYR SER SEQRES 11 B 285 GLU ARG THR GLY GLN SER LYS GLY TYR GLY PHE ALA GLU SEQRES 12 B 285 TYR MET LYS LYS ASP SER ALA ALA ARG ALA LYS SER ASP SEQRES 13 B 285 LEU LEU GLY LYS PRO LEU GLY PRO ARG THR LEU TYR VAL SEQRES 14 B 285 HIS TRP THR ASP ALA GLY GLN LEU THR PRO ALA LEU LEU SEQRES 15 B 285 HIS SER ARG CYS LEU CYS VAL ASP ARG LEU PRO PRO GLY SEQRES 16 B 285 PHE ASN ASP VAL ASP ALA LEU CYS ARG ALA LEU SER ALA SEQRES 17 B 285 VAL HIS SER PRO THR PHE CYS GLN LEU ALA CYS GLY GLN SEQRES 18 B 285 ASP GLY GLN LEU LYS GLY PHE ALA VAL LEU GLU TYR GLU SEQRES 19 B 285 THR ALA GLU MET ALA GLU GLU ALA GLN GLN GLN ALA ASP SEQRES 20 B 285 GLY LEU SER LEU GLY GLY SER HIS LEU ARG VAL SER PHE SEQRES 21 B 285 CYS ALA PRO GLY PRO PRO GLY ARG SER MET LEU ALA ALA SEQRES 22 B 285 LEU ILE ALA ALA GLN ALA THR ALA LEU ASN ARG GLY HET EPE A2001 15 HET GOL A2002 6 HET GOL A2003 6 HET GOL B3001 6 HET GOL B3002 6 HET GOL B3003 6 HET GOL B3004 6 HET GOL B3005 6 HET GOL B3006 6 HET GOL B3007 6 HET GOL B3008 6 HET GOL B3009 6 HET GOL B3010 6 HET GOL B3011 6 HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETNAM GOL GLYCEROL HETSYN EPE HEPES HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 EPE C8 H18 N2 O4 S FORMUL 4 GOL 13(C3 H8 O3) FORMUL 17 HOH *254(H2 O) HELIX 1 1 ASN A 962 LYS A 978 1 17 HELIX 2 2 ASN A 984 VAL A 1004 1 21 HELIX 3 3 GLY A 1009 LYS A 1037 1 29 HELIX 4 4 ASP A 1041 ARG A 1054 1 14 HELIX 5 5 ARG A 1054 GLY A 1074 1 21 HELIX 6 6 SER A 1079 SER A 1112 1 34 HELIX 7 7 ASP B 40 ARG B 56 1 17 HELIX 8 8 THR B 71 LEU B 79 1 9 HELIX 9 9 ASN B 102 HIS B 114 1 13 HELIX 10 10 THR B 144 ARG B 153 1 10 HELIX 11 11 PRO B 154 GLY B 156 5 3 HELIX 12 12 LYS B 182 LEU B 194 1 13 HELIX 13 13 ASP B 209 LEU B 213 5 5 HELIX 14 14 PRO B 215 HIS B 219 5 5 HELIX 15 15 ASP B 234 LEU B 242 1 9 HELIX 16 16 THR B 271 ASP B 283 1 13 HELIX 17 17 PRO B 302 ASN B 319 1 18 SHEET 1 A 4 LEU B 84 ASP B 90 0 SHEET 2 A 4 THR B 95 LEU B 100 -1 O THR B 95 N ASP B 90 SHEET 3 A 4 LYS B 60 ARG B 64 -1 N ILE B 61 O VAL B 98 SHEET 4 A 4 SER B 124 LEU B 127 -1 O GLN B 126 N LEU B 62 SHEET 1 B 2 ARG B 117 LEU B 118 0 SHEET 2 B 2 ARG B 121 GLU B 122 -1 O ARG B 121 N LEU B 118 SHEET 1 C 4 LEU B 158 TYR B 165 0 SHEET 2 C 4 SER B 172 TYR B 180 -1 O GLU B 179 N GLU B 159 SHEET 3 C 4 LEU B 133 ALA B 137 -1 N LEU B 134 O ALA B 178 SHEET 4 C 4 TYR B 204 TRP B 207 -1 O TYR B 204 N ALA B 137 SHEET 1 D 2 PRO B 197 LEU B 198 0 SHEET 2 D 2 ARG B 201 THR B 202 -1 O ARG B 201 N LEU B 198 SHEET 1 E 4 PHE B 250 CYS B 255 0 SHEET 2 E 4 LEU B 261 GLU B 268 -1 O PHE B 264 N ALA B 254 SHEET 3 E 4 CYS B 222 ASP B 226 -1 N VAL B 225 O ALA B 265 SHEET 4 E 4 ARG B 293 PHE B 296 -1 O SER B 295 N CYS B 224 SHEET 1 F 2 SER B 286 LEU B 287 0 SHEET 2 F 2 SER B 290 HIS B 291 -1 O SER B 290 N LEU B 287 SSBOND 1 CYS B 239 CYS B 251 1555 1555 2.05 SITE 1 AC1 5 PRO A1130 TYR A1132 GLN A1133 LYS B 262 SITE 2 AC1 5 LEU B 318 SITE 1 AC2 5 SER A 980 SER A 981 LYS A 991 LYS A1128 SITE 2 AC2 5 HOH A2189 SITE 1 AC3 3 ASP A1026 THR A1029 LYS A1033 SITE 1 AC4 7 PRO B 141 SER B 172 GLN B 279 PHE B 296 SITE 2 AC4 7 HOH B3134 HOH B3211 HOH B3220 SITE 1 AC5 7 PRO B 140 PRO B 141 SER B 142 PRO B 200 SITE 2 AC5 7 ARG B 201 HOH B3129 HOH B3253 SITE 1 AC6 4 TYR B 86 THR B 99 MET B 181 HOH B3128 SITE 1 AC7 5 ARG B 53 ASN B 57 ASN B 102 GLY B 103 SITE 2 AC7 5 GLU B 104 SITE 1 AC8 5 GLN B 54 LEU B 158 CYS B 161 HOH B3216 SITE 2 AC8 5 HOH B3237 SITE 1 AC9 4 THR B 71 ASN B 72 GLN B 73 LYS B 91 SITE 1 BC1 5 GLU B 167 HIS B 219 ALA B 272 GLU B 276 SITE 2 BC1 5 HOH B3191 SITE 1 BC2 5 SER A1008 GLU B 122 LEU B 123 SER B 124 SITE 2 BC2 5 HOH B3245 SITE 1 BC3 8 TYR A1132 ASN B 138 THR B 202 TYR B 204 SITE 2 BC3 8 CYS B 224 LEU B 310 HOH B3207 HOH B3241 SITE 1 BC4 2 THR B 214 LEU B 217 SITE 1 BC5 7 GLU B 43 LYS B 46 ARG B 47 HIS B 50 SITE 2 BC5 7 GLN B 145 TYR B 165 HOH B3145 CRYST1 164.905 164.905 102.594 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006064 0.003501 0.000000 0.00000 SCALE2 0.000000 0.007002 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009747 0.00000 CONECT 3025 3114 CONECT 3114 3025 CONECT 3601 3602 3606 3610 CONECT 3602 3601 3603 CONECT 3603 3602 3604 CONECT 3604 3603 3605 3607 CONECT 3605 3604 3606 CONECT 3606 3601 3605 CONECT 3607 3604 3608 CONECT 3608 3607 3609 CONECT 3609 3608 CONECT 3610 3601 3611 CONECT 3611 3610 3612 CONECT 3612 3611 3613 3614 3615 CONECT 3613 3612 CONECT 3614 3612 CONECT 3615 3612 CONECT 3616 3617 3618 CONECT 3617 3616 CONECT 3618 3616 3619 3620 CONECT 3619 3618 CONECT 3620 3618 3621 CONECT 3621 3620 CONECT 3622 3623 3624 CONECT 3623 3622 CONECT 3624 3622 3625 3626 CONECT 3625 3624 CONECT 3626 3624 3627 CONECT 3627 3626 CONECT 3628 3629 3630 CONECT 3629 3628 CONECT 3630 3628 3631 3632 CONECT 3631 3630 CONECT 3632 3630 3633 CONECT 3633 3632 CONECT 3634 3635 3636 CONECT 3635 3634 CONECT 3636 3634 3637 3638 CONECT 3637 3636 CONECT 3638 3636 3639 CONECT 3639 3638 CONECT 3640 3641 3642 CONECT 3641 3640 CONECT 3642 3640 3643 3644 CONECT 3643 3642 CONECT 3644 3642 3645 CONECT 3645 3644 CONECT 3646 3647 3648 CONECT 3647 3646 CONECT 3648 3646 3649 3650 CONECT 3649 3648 CONECT 3650 3648 3651 CONECT 3651 3650 CONECT 3652 3653 3654 CONECT 3653 3652 CONECT 3654 3652 3655 3656 CONECT 3655 3654 CONECT 3656 3654 3657 CONECT 3657 3656 CONECT 3658 3659 3660 CONECT 3659 3658 CONECT 3660 3658 3661 3662 CONECT 3661 3660 CONECT 3662 3660 3663 CONECT 3663 3662 CONECT 3664 3665 3666 CONECT 3665 3664 CONECT 3666 3664 3667 3668 CONECT 3667 3666 CONECT 3668 3666 3669 CONECT 3669 3668 CONECT 3670 3671 3672 CONECT 3671 3670 CONECT 3672 3670 3673 3674 CONECT 3673 3672 CONECT 3674 3672 3675 CONECT 3675 3674 CONECT 3676 3677 3678 CONECT 3677 3676 CONECT 3678 3676 3679 3680 CONECT 3679 3678 CONECT 3680 3678 3681 CONECT 3681 3680 CONECT 3682 3683 3684 CONECT 3683 3682 CONECT 3684 3682 3685 3686 CONECT 3685 3684 CONECT 3686 3684 3687 CONECT 3687 3686 CONECT 3688 3689 3690 CONECT 3689 3688 CONECT 3690 3688 3691 3692 CONECT 3691 3690 CONECT 3692 3690 3693 CONECT 3693 3692 MASTER 475 0 14 17 18 0 24 6 3931 2 95 44 END