HEADER SIGNALING PROTEIN 04-AUG-11 3VG9
TITLE CRYSTAL STRUCTURE OF HUMAN ADENOSINE A2A RECEPTOR WITH AN ALLOSTERIC
TITLE 2 INVERSE-AGONIST ANTIBODY AT 2.7 A RESOLUTION
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: ADENOSINE RECEPTOR A2A;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: UNP RESIDUES 1-316;
COMPND 5 ENGINEERED: YES;
COMPND 6 MUTATION: YES;
COMPND 7 MOL_ID: 2;
COMPND 8 MOLECULE: ANTIBODY FAB FRAGMENT LIGHT CHAIN;
COMPND 9 CHAIN: B;
COMPND 10 MOL_ID: 3;
COMPND 11 MOLECULE: ANTIBODY FAB FRAGMENT HEAVY CHAIN;
COMPND 12 CHAIN: C
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: ADORA2A, ADORA2;
SOURCE 6 EXPRESSION_SYSTEM: PICHIA PASTORIS;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922;
SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PPIC9K;
SOURCE 10 MOL_ID: 2;
SOURCE 11 ORGANISM_SCIENTIFIC: MUS MUSCULUS;
SOURCE 12 ORGANISM_COMMON: MOUSE;
SOURCE 13 ORGANISM_TAXID: 10090;
SOURCE 14 MOL_ID: 3;
SOURCE 15 ORGANISM_SCIENTIFIC: MUS MUSCULUS;
SOURCE 16 ORGANISM_COMMON: MOUSE;
SOURCE 17 ORGANISM_TAXID: 10090
KEYWDS 7 TRANSMEMBRANE RECEPTOR, SIGNAL TRANSDUCTION, SIGNALING PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR T.HINO,T.ARAKAWA,H.IWANARI,T.YURUGI-KOBAYASHI,C.IKEDA-SUNO,Y.NAKADA-
AUTHOR 2 NAKURA,O.KUSANO-ARAI,S.WEYAND,T.SHIMAMURA,N.NOMURA,A.D.CAMERON,
AUTHOR 3 T.KOBAYASHI,T.HAMAKUBO,S.IWATA,T.MURATA
REVDAT 4 06-NOV-24 3VG9 1 REMARK
REVDAT 3 08-NOV-23 3VG9 1 REMARK SEQADV
REVDAT 2 15-FEB-12 3VG9 1 JRNL
REVDAT 1 01-FEB-12 3VG9 0
JRNL AUTH T.HINO,T.ARAKAWA,H.IWANARI,T.YURUGI-KOBAYASHI,C.IKEDA-SUNO,
JRNL AUTH 2 Y.NAKADA-NAKURA,O.KUSANO-ARAI,S.WEYAND,T.SHIMAMURA,N.NOMURA,
JRNL AUTH 3 A.D.CAMERON,T.KOBAYASHI,T.HAMAKUBO,S.IWATA,T.MURATA
JRNL TITL G-PROTEIN-COUPLED RECEPTOR INACTIVATION BY AN ALLOSTERIC
JRNL TITL 2 INVERSE-AGONIST ANTIBODY
JRNL REF NATURE V. 482 237 2012
JRNL REFN ISSN 0028-0836
JRNL PMID 22286059
JRNL DOI 10.1038/NATURE10750
REMARK 2
REMARK 2 RESOLUTION. 2.70 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7_650)
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : MLHL
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 92.8
REMARK 3 NUMBER OF REFLECTIONS : 30910
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.208
REMARK 3 R VALUE (WORKING SET) : 0.206
REMARK 3 FREE R VALUE : 0.246
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030
REMARK 3 FREE R VALUE TEST SET COUNT : 1554
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 19.9957 - 5.9563 0.90 2666 129 0.2375 0.2743
REMARK 3 2 5.9563 - 4.7486 0.95 2766 125 0.1718 0.1891
REMARK 3 3 4.7486 - 4.1544 0.92 2627 148 0.1554 0.2022
REMARK 3 4 4.1544 - 3.7774 0.94 2699 150 0.1644 0.2204
REMARK 3 5 3.7774 - 3.5082 0.93 2715 145 0.1850 0.2197
REMARK 3 6 3.5082 - 3.3023 0.92 2592 138 0.2083 0.2583
REMARK 3 7 3.3023 - 3.1376 0.94 2703 139 0.2177 0.2697
REMARK 3 8 3.1376 - 3.0015 0.95 2723 152 0.2303 0.2559
REMARK 3 9 3.0015 - 2.8863 0.93 2649 147 0.2701 0.3302
REMARK 3 10 2.8863 - 2.7870 0.90 2566 136 0.3323 0.3656
REMARK 3 11 2.7870 - 2.7000 0.93 2650 145 0.3616 0.3872
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL
REMARK 3 SOLVENT RADIUS : 1.00
REMARK 3 SHRINKAGE RADIUS : 0.72
REMARK 3 K_SOL : 0.29
REMARK 3 B_SOL : 80.62
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.350
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 64.50
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -16.82090
REMARK 3 B22 (A**2) : 1.40610
REMARK 3 B33 (A**2) : 15.41470
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : -20.18040
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.010 6230
REMARK 3 ANGLE : 1.032 8082
REMARK 3 CHIRALITY : 0.072 916
REMARK 3 PLANARITY : 0.005 996
REMARK 3 DIHEDRAL : 17.830 2147
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 3
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: CHAIN 'A'
REMARK 3 ORIGIN FOR THE GROUP (A): -61.2381 -9.3148 -37.2050
REMARK 3 T TENSOR
REMARK 3 T11: 0.2194 T22: 0.7887
REMARK 3 T33: 0.4834 T12: -0.0516
REMARK 3 T13: -0.5699 T23: 0.1294
REMARK 3 L TENSOR
REMARK 3 L11: 0.0495 L22: 0.0531
REMARK 3 L33: 0.0848 L12: 0.0197
REMARK 3 L13: 0.0282 L23: -0.0287
REMARK 3 S TENSOR
REMARK 3 S11: 0.1039 S12: 0.0805 S13: -0.0055
REMARK 3 S21: -0.1023 S22: 0.0714 S23: 0.1100
REMARK 3 S31: 0.0360 S32: -0.1416 S33: 0.1309
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: CHAIN 'B'
REMARK 3 ORIGIN FOR THE GROUP (A): -20.5598 -16.5938 4.8453
REMARK 3 T TENSOR
REMARK 3 T11: 0.3031 T22: 0.3269
REMARK 3 T33: 0.3150 T12: -0.0412
REMARK 3 T13: -0.0539 T23: 0.0177
REMARK 3 L TENSOR
REMARK 3 L11: 0.1924 L22: 0.1334
REMARK 3 L33: 0.0697 L12: 0.0537
REMARK 3 L13: 0.0601 L23: 0.0271
REMARK 3 S TENSOR
REMARK 3 S11: -0.0204 S12: -0.0975 S13: -0.0330
REMARK 3 S21: -0.0626 S22: 0.0069 S23: 0.0222
REMARK 3 S31: -0.0023 S32: -0.0953 S33: -0.0034
REMARK 3 TLS GROUP : 3
REMARK 3 SELECTION: CHAIN 'C'
REMARK 3 ORIGIN FOR THE GROUP (A): -19.3680 0.4409 0.3000
REMARK 3 T TENSOR
REMARK 3 T11: 0.3089 T22: 0.2690
REMARK 3 T33: 0.3964 T12: 0.0471
REMARK 3 T13: -0.0543 T23: -0.0758
REMARK 3 L TENSOR
REMARK 3 L11: 0.0967 L22: 0.1638
REMARK 3 L33: 0.0294 L12: -0.0018
REMARK 3 L13: -0.0006 L23: -0.0256
REMARK 3 S TENSOR
REMARK 3 S11: 0.0220 S12: -0.0147 S13: 0.0651
REMARK 3 S21: -0.0342 S22: -0.0121 S23: -0.1105
REMARK 3 S31: -0.0499 S32: -0.0027 S33: 0.0051
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 3VG9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-AUG-11.
REMARK 100 THE DEPOSITION ID IS D_1000095007.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 07-MAR-10
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 6.5
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : DIAMOND
REMARK 200 BEAMLINE : I24
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795
REMARK 200 MONOCHROMATOR : ACCEL FIXED EXIT DOUBLE CRYSTAL
REMARK 200 SI(111)
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM
REMARK 200 DATA SCALING SOFTWARE : SCALA
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31030
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700
REMARK 200 RESOLUTION RANGE LOW (A) : 72.100
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 93.2
REMARK 200 DATA REDUNDANCY : 2.300
REMARK 200 R MERGE (I) : 0.11500
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 4.5000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85
REMARK 200 COMPLETENESS FOR SHELL (%) : 92.9
REMARK 200 DATA REDUNDANCY IN SHELL : 2.30
REMARK 200 R MERGE FOR SHELL (I) : 0.59000
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.300
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: PDB ENTRY 3EML AND 1P7K
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 66.20
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.64
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 400, 0.1M MES, 0.2M MAGNESIUM
REMARK 280 CHLORIDE, 0.5% OCTHYL THIOGLUCOSIDE, PH 6.5, VAPOR DIFFUSION,
REMARK 280 HANGING DROP, TEMPERATURE 293K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,Y,-Z
REMARK 290 3555 X+1/2,Y+1/2,Z
REMARK 290 4555 -X+1/2,Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 60.59000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.07500
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 60.59000
REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 45.07500
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 9090 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 33200 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 375
REMARK 375 SPECIAL POSITION
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL
REMARK 375 POSITIONS.
REMARK 375
REMARK 375 ATOM RES CSSEQI
REMARK 375 HOH C 235 LIES ON A SPECIAL POSITION.
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A 1
REMARK 465 PRO A 2
REMARK 465 ILE A 3
REMARK 465 MET A 4
REMARK 465 GLY A 5
REMARK 465 PRO A 149
REMARK 465 LYS A 150
REMARK 465 GLU A 151
REMARK 465 GLY A 152
REMARK 465 LYS A 153
REMARK 465 GLN A 154
REMARK 465 HIS A 155
REMARK 465 GLN A 310
REMARK 465 GLN A 311
REMARK 465 GLU A 312
REMARK 465 PRO A 313
REMARK 465 PHE A 314
REMARK 465 LYS A 315
REMARK 465 ALA A 316
REMARK 465 HIS A 317
REMARK 465 HIS A 318
REMARK 465 HIS A 319
REMARK 465 HIS A 320
REMARK 465 HIS A 321
REMARK 465 HIS A 322
REMARK 465 HIS A 323
REMARK 465 HIS A 324
REMARK 465 HIS A 325
REMARK 465 HIS A 326
REMARK 465 GLU B 213
REMARK 465 CYS B 214
REMARK 465 ASP C 141
REMARK 465 THR C 142
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 LEU A 58 -67.94 -121.02
REMARK 500 PHE A 83 -56.40 -130.17
REMARK 500 GLN A 157 -62.18 -126.44
REMARK 500 TYR A 179 -62.67 -124.73
REMARK 500 ASN A 181 -74.29 -115.00
REMARK 500 ALA A 184 -64.46 -99.01
REMARK 500 VAL A 186 -63.14 -127.94
REMARK 500 GLU A 219 -68.81 -131.85
REMARK 500 SER A 263 -178.51 -68.01
REMARK 500 PRO A 266 -177.26 -62.74
REMARK 500 TYR B 30 -121.18 62.81
REMARK 500 LEU B 47 -60.72 -120.72
REMARK 500 ALA B 51 -29.55 72.89
REMARK 500 ALA B 57 -2.71 79.20
REMARK 500 ASN B 76 -78.12 -86.20
REMARK 500 LYS B 169 -65.40 -100.82
REMARK 500 ASN B 190 -63.29 -122.48
REMARK 500 LYS C 43 -77.49 -123.24
REMARK 500 ALA C 92 -174.16 -173.57
REMARK 500 PRO C 137 151.32 -49.53
REMARK 500 PHE C 157 138.15 -177.07
REMARK 500 SER C 183 -117.33 50.67
REMARK 500 PRO C 200 42.54 -92.73
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZMA A 401
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE STE A 402
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE STE A 403
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE STE A 404
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE STE A 405
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE STE A 406
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE STE A 407
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LMT A 408
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 3VGA RELATED DB: PDB
REMARK 900 CRYSTAL STRUCTURE OF HUMAN ADENOSINE A2A RECEPTOR WITH AN
REMARK 900 ALLOSTERIC INVERSE-AGONIST ANTIBODY AT 3.1 A RESOLUTION
DBREF 3VG9 A 1 316 UNP P29274 AA2AR_HUMAN 1 316
DBREF 3VG9 B 1 214 PDB 3VG9 3VG9 1 214
DBREF 3VG9 C 1 226 PDB 3VG9 3VG9 1 226
SEQADV 3VG9 GLN A 154 UNP P29274 ASN 154 ENGINEERED MUTATION
SEQADV 3VG9 HIS A 317 UNP P29274 EXPRESSION TAG
SEQADV 3VG9 HIS A 318 UNP P29274 EXPRESSION TAG
SEQADV 3VG9 HIS A 319 UNP P29274 EXPRESSION TAG
SEQADV 3VG9 HIS A 320 UNP P29274 EXPRESSION TAG
SEQADV 3VG9 HIS A 321 UNP P29274 EXPRESSION TAG
SEQADV 3VG9 HIS A 322 UNP P29274 EXPRESSION TAG
SEQADV 3VG9 HIS A 323 UNP P29274 EXPRESSION TAG
SEQADV 3VG9 HIS A 324 UNP P29274 EXPRESSION TAG
SEQADV 3VG9 HIS A 325 UNP P29274 EXPRESSION TAG
SEQADV 3VG9 HIS A 326 UNP P29274 EXPRESSION TAG
SEQRES 1 A 326 MET PRO ILE MET GLY SER SER VAL TYR ILE THR VAL GLU
SEQRES 2 A 326 LEU ALA ILE ALA VAL LEU ALA ILE LEU GLY ASN VAL LEU
SEQRES 3 A 326 VAL CYS TRP ALA VAL TRP LEU ASN SER ASN LEU GLN ASN
SEQRES 4 A 326 VAL THR ASN TYR PHE VAL VAL SER LEU ALA ALA ALA ASP
SEQRES 5 A 326 ILE ALA VAL GLY VAL LEU ALA ILE PRO PHE ALA ILE THR
SEQRES 6 A 326 ILE SER THR GLY PHE CYS ALA ALA CYS HIS GLY CYS LEU
SEQRES 7 A 326 PHE ILE ALA CYS PHE VAL LEU VAL LEU THR GLN SER SER
SEQRES 8 A 326 ILE PHE SER LEU LEU ALA ILE ALA ILE ASP ARG TYR ILE
SEQRES 9 A 326 ALA ILE ARG ILE PRO LEU ARG TYR ASN GLY LEU VAL THR
SEQRES 10 A 326 GLY THR ARG ALA LYS GLY ILE ILE ALA ILE CYS TRP VAL
SEQRES 11 A 326 LEU SER PHE ALA ILE GLY LEU THR PRO MET LEU GLY TRP
SEQRES 12 A 326 ASN ASN CYS GLY GLN PRO LYS GLU GLY LYS GLN HIS SER
SEQRES 13 A 326 GLN GLY CYS GLY GLU GLY GLN VAL ALA CYS LEU PHE GLU
SEQRES 14 A 326 ASP VAL VAL PRO MET ASN TYR MET VAL TYR PHE ASN PHE
SEQRES 15 A 326 PHE ALA CYS VAL LEU VAL PRO LEU LEU LEU MET LEU GLY
SEQRES 16 A 326 VAL TYR LEU ARG ILE PHE LEU ALA ALA ARG ARG GLN LEU
SEQRES 17 A 326 LYS GLN MET GLU SER GLN PRO LEU PRO GLY GLU ARG ALA
SEQRES 18 A 326 ARG SER THR LEU GLN LYS GLU VAL HIS ALA ALA LYS SER
SEQRES 19 A 326 LEU ALA ILE ILE VAL GLY LEU PHE ALA LEU CYS TRP LEU
SEQRES 20 A 326 PRO LEU HIS ILE ILE ASN CYS PHE THR PHE PHE CYS PRO
SEQRES 21 A 326 ASP CYS SER HIS ALA PRO LEU TRP LEU MET TYR LEU ALA
SEQRES 22 A 326 ILE VAL LEU SER HIS THR ASN SER VAL VAL ASN PRO PHE
SEQRES 23 A 326 ILE TYR ALA TYR ARG ILE ARG GLU PHE ARG GLN THR PHE
SEQRES 24 A 326 ARG LYS ILE ILE ARG SER HIS VAL LEU ARG GLN GLN GLU
SEQRES 25 A 326 PRO PHE LYS ALA HIS HIS HIS HIS HIS HIS HIS HIS HIS
SEQRES 26 A 326 HIS
SEQRES 1 B 214 ASP ILE VAL MET THR GLN SER PRO ALA SER LEU SER ALA
SEQRES 2 B 214 SER VAL GLY ASP THR VAL THR ILE THR CYS ARG ALA SER
SEQRES 3 B 214 GLU PHE ILE TYR SER SER LEU THR TRP TYR GLN GLN LYS
SEQRES 4 B 214 GLN GLY GLY SER PRO GLN LEU LEU VAL TYR ALA ALA THR
SEQRES 5 B 214 ASN LEU ALA ASP ALA VAL PRO SER ARG PHE SER GLY SER
SEQRES 6 B 214 GLY SER GLY THR GLN PHE SER LEU LYS ILE ASN ARG LEU
SEQRES 7 B 214 GLN PRO GLU ASP PHE GLY THR TYR TYR CYS GLN HIS PHE
SEQRES 8 B 214 TYR GLY SER THR TRP ALA PHE GLY GLY GLY THR LYS LEU
SEQRES 9 B 214 GLU ILE LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE
SEQRES 10 B 214 PHE PRO PRO SER SER GLU GLN LEU THR SER GLY GLY ALA
SEQRES 11 B 214 SER VAL VAL CYS PHE LEU ASN ASN PHE TYR PRO LYS ASP
SEQRES 12 B 214 ILE ASN VAL LYS TRP LYS ILE ASP GLY SER GLU ARG GLN
SEQRES 13 B 214 ASN GLY VAL LEU ASN SER TRP THR ASP GLN ASP SER LYS
SEQRES 14 B 214 ASP SER THR TYR SER MET SER SER THR LEU THR LEU THR
SEQRES 15 B 214 LYS ASP GLU TYR GLU ARG HIS ASN SER TYR THR CYS GLU
SEQRES 16 B 214 ALA THR HIS LYS THR SER THR SER PRO ILE VAL LYS SER
SEQRES 17 B 214 PHE ASN ARG ASN GLU CYS
SEQRES 1 C 226 GLU VAL GLN LEU GLN GLN SER GLY ALA GLU LEU VAL LYS
SEQRES 2 C 226 PRO GLY SER SER VAL LYS ILE SER CYS LYS THR SER GLY
SEQRES 3 C 226 ASP SER PHE THR ALA TYR ASN MET ASN TRP VAL LYS GLN
SEQRES 4 C 226 SER HIS GLY LYS SER LEU GLU TRP ILE GLY ASN ILE ASN
SEQRES 5 C 226 PRO TYR TYR GLY SER THR ARG TYR ASN GLN LYS PHE LYS
SEQRES 6 C 226 GLY LYS ALA THR LEU THR VAL ASP LYS SER SER SER THR
SEQRES 7 C 226 ALA TYR ILE GLN LEU ASN SER LEU THR SER GLU ASP SER
SEQRES 8 C 226 ALA VAL TYR TYR CYS ALA ARG GLU GLY ASN TYR TYR ASP
SEQRES 9 C 226 GLY GLY SER VAL ARG TYR PHE ASP TYR TRP GLY GLN GLY
SEQRES 10 C 226 THR THR LEU THR VAL SER SER ALA LYS THR THR ALA PRO
SEQRES 11 C 226 SER VAL TYR PRO LEU ALA PRO VAL CYS GLY ASP THR SER
SEQRES 12 C 226 GLY SER SER VAL THR LEU GLY CYS LEU VAL LYS GLY TYR
SEQRES 13 C 226 PHE PRO GLU PRO VAL THR LEU THR TRP ASN SER GLY SER
SEQRES 14 C 226 LEU SER SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN
SEQRES 15 C 226 SER ASP LEU TYR THR LEU SER SER SER VAL THR VAL THR
SEQRES 16 C 226 SER SER THR TRP PRO SER GLN SER ILE THR CYS ASN VAL
SEQRES 17 C 226 ALA HIS PRO ALA SER SER THR LYS VAL ASP LYS LYS ILE
SEQRES 18 C 226 GLU PRO ARG GLY PRO
HET ZMA A 401 25
HET STE A 402 20
HET STE A 403 20
HET STE A 404 20
HET STE A 405 20
HET STE A 406 20
HET STE A 407 20
HET LMT A 408 35
HETNAM ZMA 4-{2-[(7-AMINO-2-FURAN-2-YL[1,2,4]TRIAZOLO[1,5-A][1,3,
HETNAM 2 ZMA 5]TRIAZIN-5-YL)AMINO]ETHYL}PHENOL
HETNAM STE STEARIC ACID
HETNAM LMT DODECYL-BETA-D-MALTOSIDE
FORMUL 4 ZMA C16 H15 N7 O2
FORMUL 5 STE 6(C18 H36 O2)
FORMUL 11 LMT C24 H46 O11
FORMUL 12 HOH *70(H2 O)
HELIX 1 1 SER A 6 ASN A 34 1 29
HELIX 2 2 SER A 35 GLN A 38 5 4
HELIX 3 3 ASN A 39 LEU A 58 1 20
HELIX 4 4 LEU A 58 ILE A 66 1 9
HELIX 5 5 SER A 67 GLY A 69 5 3
HELIX 6 6 ALA A 73 CYS A 82 1 10
HELIX 7 7 PHE A 83 ILE A 108 1 26
HELIX 8 8 ILE A 108 VAL A 116 1 9
HELIX 9 9 THR A 117 LEU A 137 1 21
HELIX 10 10 THR A 138 GLY A 142 5 5
HELIX 11 11 LEU A 167 VAL A 172 1 6
HELIX 12 12 PRO A 173 VAL A 178 1 6
HELIX 13 13 VAL A 186 GLN A 214 1 29
HELIX 14 14 ALA A 221 CYS A 259 1 39
HELIX 15 15 LEU A 269 ASN A 280 1 12
HELIX 16 16 VAL A 283 ILE A 292 1 10
HELIX 17 17 ILE A 292 VAL A 307 1 16
HELIX 18 18 GLN B 79 PHE B 83 5 5
HELIX 19 19 SER B 121 GLY B 128 1 8
HELIX 20 20 LYS B 183 ARG B 188 1 6
HELIX 21 21 SER C 28 TYR C 32 5 5
HELIX 22 22 GLN C 62 LYS C 65 5 4
HELIX 23 23 THR C 87 SER C 91 5 5
HELIX 24 24 SER C 167 SER C 169 5 3
HELIX 25 25 PRO C 211 SER C 214 5 4
SHEET 1 A 4 MET B 4 SER B 7 0
SHEET 2 A 4 VAL B 19 ALA B 25 -1 O THR B 22 N SER B 7
SHEET 3 A 4 GLN B 70 ILE B 75 -1 O LEU B 73 N ILE B 21
SHEET 4 A 4 PHE B 62 SER B 67 -1 N SER B 63 O LYS B 74
SHEET 1 B 6 SER B 10 ALA B 13 0
SHEET 2 B 6 THR B 102 ILE B 106 1 O LYS B 103 N LEU B 11
SHEET 3 B 6 GLY B 84 HIS B 90 -1 N GLY B 84 O LEU B 104
SHEET 4 B 6 LEU B 33 GLN B 38 -1 N GLN B 38 O THR B 85
SHEET 5 B 6 GLN B 45 TYR B 49 -1 O LEU B 47 N TRP B 35
SHEET 6 B 6 ASN B 53 LEU B 54 -1 O ASN B 53 N TYR B 49
SHEET 1 C 4 SER B 10 ALA B 13 0
SHEET 2 C 4 THR B 102 ILE B 106 1 O LYS B 103 N LEU B 11
SHEET 3 C 4 GLY B 84 HIS B 90 -1 N GLY B 84 O LEU B 104
SHEET 4 C 4 ALA B 97 PHE B 98 -1 O ALA B 97 N HIS B 90
SHEET 1 D 4 THR B 114 PHE B 118 0
SHEET 2 D 4 GLY B 129 PHE B 139 -1 O VAL B 133 N PHE B 118
SHEET 3 D 4 TYR B 173 THR B 182 -1 O TYR B 173 N PHE B 139
SHEET 4 D 4 VAL B 159 TRP B 163 -1 N LEU B 160 O THR B 178
SHEET 1 E 4 SER B 153 GLU B 154 0
SHEET 2 E 4 ASN B 145 ILE B 150 -1 N ILE B 150 O SER B 153
SHEET 3 E 4 SER B 191 THR B 197 -1 O THR B 193 N LYS B 149
SHEET 4 E 4 ILE B 205 ASN B 210 -1 O ILE B 205 N ALA B 196
SHEET 1 F 4 GLN C 3 GLN C 6 0
SHEET 2 F 4 VAL C 18 SER C 25 -1 O LYS C 23 N GLN C 5
SHEET 3 F 4 THR C 78 LEU C 83 -1 O ILE C 81 N ILE C 20
SHEET 4 F 4 ALA C 68 ASP C 73 -1 N ASP C 73 O THR C 78
SHEET 1 G 6 GLU C 10 VAL C 12 0
SHEET 2 G 6 THR C 118 VAL C 122 1 O THR C 119 N GLU C 10
SHEET 3 G 6 ALA C 92 TYR C 103 -1 N TYR C 94 O THR C 118
SHEET 4 G 6 MET C 34 SER C 40 -1 N ASN C 35 O ALA C 97
SHEET 5 G 6 SER C 44 ASN C 52 -1 O ILE C 48 N TRP C 36
SHEET 6 G 6 SER C 57 TYR C 60 -1 O SER C 57 N ASN C 52
SHEET 1 H 4 GLU C 10 VAL C 12 0
SHEET 2 H 4 THR C 118 VAL C 122 1 O THR C 119 N GLU C 10
SHEET 3 H 4 ALA C 92 TYR C 103 -1 N TYR C 94 O THR C 118
SHEET 4 H 4 SER C 107 TRP C 114 -1 O VAL C 108 N TYR C 102
SHEET 1 I 4 SER C 131 LEU C 135 0
SHEET 2 I 4 SER C 146 TYR C 156 -1 O LEU C 152 N TYR C 133
SHEET 3 I 4 LEU C 185 THR C 195 -1 O LEU C 188 N VAL C 153
SHEET 4 I 4 VAL C 174 THR C 176 -1 N HIS C 175 O SER C 191
SHEET 1 J 4 SER C 131 LEU C 135 0
SHEET 2 J 4 SER C 146 TYR C 156 -1 O LEU C 152 N TYR C 133
SHEET 3 J 4 LEU C 185 THR C 195 -1 O LEU C 188 N VAL C 153
SHEET 4 J 4 VAL C 180 GLN C 182 -1 N GLN C 182 O LEU C 185
SHEET 1 K 3 THR C 162 TRP C 165 0
SHEET 2 K 3 THR C 205 HIS C 210 -1 O ASN C 207 N THR C 164
SHEET 3 K 3 THR C 215 LYS C 220 -1 O LYS C 219 N CYS C 206
SSBOND 1 CYS A 71 CYS A 159 1555 1555 2.02
SSBOND 2 CYS A 74 CYS A 146 1555 1555 2.03
SSBOND 3 CYS A 77 CYS A 166 1555 1555 2.11
SSBOND 4 CYS A 259 CYS A 262 1555 1555 2.80
SSBOND 5 CYS B 23 CYS B 88 1555 1555 2.05
SSBOND 6 CYS B 134 CYS B 194 1555 1555 2.03
SSBOND 7 CYS C 22 CYS C 96 1555 1555 2.03
SSBOND 8 CYS C 151 CYS C 206 1555 1555 2.03
CISPEP 1 LEU A 216 PRO A 217 0 4.68
CISPEP 2 SER B 7 PRO B 8 0 -3.13
CISPEP 3 TYR B 140 PRO B 141 0 -0.36
CISPEP 4 PHE C 157 PRO C 158 0 -4.26
CISPEP 5 GLU C 159 PRO C 160 0 -4.93
CISPEP 6 TRP C 199 PRO C 200 0 -3.46
CISPEP 7 GLY C 225 PRO C 226 0 0.65
SITE 1 AC1 9 LEU A 85 PHE A 168 GLU A 169 TRP A 246
SITE 2 AC1 9 LEU A 249 HIS A 250 ASN A 253 MET A 270
SITE 3 AC1 9 TYR A 271
SITE 1 AC2 3 TYR A 103 LEU A 191 LMT A 408
SITE 1 AC3 6 LEU A 247 TYR A 290 ARG A 291 HOH A 328
SITE 2 AC3 6 STE A 404 STE A 407
SITE 1 AC4 7 LEU A 190 LEU A 191 LEU A 194 ALA A 243
SITE 2 AC4 7 ARG A 291 STE A 403 STE A 407
SITE 1 AC5 4 CYS A 28 TRP A 32 TYR A 43 STE A 406
SITE 1 AC6 2 TRP A 129 STE A 405
SITE 1 AC7 4 LEU A 202 LEU A 247 STE A 403 STE A 404
SITE 1 AC8 4 TYR A 179 ARG A 199 ARG A 206 STE A 402
CRYST1 121.180 90.150 113.550 90.00 98.10 90.00 C 1 2 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.008252 0.000000 0.001174 0.00000
SCALE2 0.000000 0.011093 0.000000 0.00000
SCALE3 0.000000 0.000000 0.008895 0.00000