HEADER SIGNALING PROTEIN 04-AUG-11 3VGA TITLE CRYSTAL STRUCTURE OF HUMAN ADENOSINE A2A RECEPTOR WITH AN ALLOSTERIC TITLE 2 INVERSE-AGONIST ANTIBODY AT 3.1 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENOSINE RECEPTOR A2A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-316; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ANTIBODY FAB FRAGMENT LIGHT CHAIN; COMPND 9 CHAIN: B; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: ANTIBODY FAB FRAGMENT HEAVY CHAIN; COMPND 12 CHAIN: C SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ADORA2A, ADORA2; SOURCE 6 EXPRESSION_SYSTEM: PICHIA PASTORIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PPIC9K; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 12 ORGANISM_COMMON: MOUSE; SOURCE 13 ORGANISM_TAXID: 10090; SOURCE 14 MOL_ID: 3; SOURCE 15 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 16 ORGANISM_COMMON: MOUSE; SOURCE 17 ORGANISM_TAXID: 10090 KEYWDS 7 TRANSMEMBRANE RECEPTOR, SIGNAL TRANSDUCTION, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.HINO,T.ARAKAWA,H.IWANARI,T.YURUGI-KOBAYASHI,C.IKEDA-SUNO,Y.NAKADA- AUTHOR 2 NAKURA,O.KUSANO-ARAI,S.WEYAND,T.SHIMAMURA,N.NOMURA,A.D.CAMERON, AUTHOR 3 T.KOBAYASHI,T.HAMAKUBO,S.IWATA,T.MURATA REVDAT 3 08-NOV-23 3VGA 1 REMARK SEQADV REVDAT 2 15-FEB-12 3VGA 1 JRNL REVDAT 1 01-FEB-12 3VGA 0 JRNL AUTH T.HINO,T.ARAKAWA,H.IWANARI,T.YURUGI-KOBAYASHI,C.IKEDA-SUNO, JRNL AUTH 2 Y.NAKADA-NAKURA,O.KUSANO-ARAI,S.WEYAND,T.SHIMAMURA,N.NOMURA, JRNL AUTH 3 A.D.CAMERON,T.KOBAYASHI,T.HAMAKUBO,S.IWATA,T.MURATA JRNL TITL G-PROTEIN-COUPLED RECEPTOR INACTIVATION BY AN ALLOSTERIC JRNL TITL 2 INVERSE-AGONIST ANTIBODY JRNL REF NATURE V. 482 237 2012 JRNL REFN ISSN 0028-0836 JRNL PMID 22286059 JRNL DOI 10.1038/NATURE10750 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.4 REMARK 3 NUMBER OF REFLECTIONS : 17901 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 968 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9969 - 5.8866 0.85 2518 151 0.2252 0.2838 REMARK 3 2 5.8866 - 4.6922 0.90 2612 135 0.1722 0.2451 REMARK 3 3 4.6922 - 4.1049 0.86 2498 132 0.1564 0.2259 REMARK 3 4 4.1049 - 3.7323 0.90 2584 158 0.1779 0.2710 REMARK 3 5 3.7323 - 3.4662 0.88 2523 137 0.2033 0.2460 REMARK 3 6 3.4662 - 3.2628 0.89 2575 114 0.2224 0.2869 REMARK 3 7 3.2628 - 3.1000 0.90 2591 141 0.2614 0.3167 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.60 REMARK 3 SHRINKAGE RADIUS : 0.27 REMARK 3 K_SOL : 0.30 REMARK 3 B_SOL : 58.17 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.830 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.760 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 79.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -15.73960 REMARK 3 B22 (A**2) : 6.80060 REMARK 3 B33 (A**2) : 8.93910 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -9.55300 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5768 REMARK 3 ANGLE : 1.278 7850 REMARK 3 CHIRALITY : 0.084 902 REMARK 3 PLANARITY : 0.006 980 REMARK 3 DIHEDRAL : 17.053 2007 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' REMARK 3 ORIGIN FOR THE GROUP (A): 62.7650 -8.8708 36.3356 REMARK 3 T TENSOR REMARK 3 T11: -0.4586 T22: 0.8223 REMARK 3 T33: -0.0638 T12: 0.0402 REMARK 3 T13: -0.2764 T23: -0.1037 REMARK 3 L TENSOR REMARK 3 L11: 0.9795 L22: 1.4776 REMARK 3 L33: 1.7749 L12: 0.0699 REMARK 3 L13: -0.6019 L23: 0.3411 REMARK 3 S TENSOR REMARK 3 S11: 0.0755 S12: -0.6853 S13: -0.0693 REMARK 3 S21: 0.5246 S22: 0.1228 S23: -0.6416 REMARK 3 S31: -0.0417 S32: 0.8520 S33: 0.0461 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'C' REMARK 3 ORIGIN FOR THE GROUP (A): 19.7508 1.4067 0.0609 REMARK 3 T TENSOR REMARK 3 T11: 0.3953 T22: 0.2013 REMARK 3 T33: 0.4645 T12: -0.0364 REMARK 3 T13: 0.0060 T23: 0.0775 REMARK 3 L TENSOR REMARK 3 L11: 4.9038 L22: 0.8705 REMARK 3 L33: 1.1396 L12: 0.7196 REMARK 3 L13: 1.6861 L23: 0.2871 REMARK 3 S TENSOR REMARK 3 S11: -0.2429 S12: 0.1178 S13: 0.6495 REMARK 3 S21: -0.0755 S22: -0.0260 S23: 0.0882 REMARK 3 S31: -0.2084 S32: 0.0898 S33: 0.2253 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' REMARK 3 ORIGIN FOR THE GROUP (A): 20.4190 -15.9471 -4.7868 REMARK 3 T TENSOR REMARK 3 T11: 0.3184 T22: 0.3262 REMARK 3 T33: 0.3417 T12: 0.0975 REMARK 3 T13: 0.0384 T23: -0.0099 REMARK 3 L TENSOR REMARK 3 L11: 3.9493 L22: 1.3228 REMARK 3 L33: 2.8884 L12: 0.2629 REMARK 3 L13: 2.6339 L23: 0.5871 REMARK 3 S TENSOR REMARK 3 S11: 0.1956 S12: 0.7483 S13: -0.0005 REMARK 3 S21: -0.2767 S22: -0.0522 S23: 0.0071 REMARK 3 S31: 0.0717 S32: 0.4044 S33: -0.1589 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3VGA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-AUG-11. REMARK 100 THE DEPOSITION ID IS D_1000095008. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-MAR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : ACCEL FIXED EXIT DOUBLE CRYSTAL REMARK 200 SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18451 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 71.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.8 REMARK 200 DATA REDUNDANCY : 2.300 REMARK 200 R MERGE (I) : 0.10900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.63600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1VGA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 400, 0.1M MES, 0.2M MAGNESIUM REMARK 280 CHLORIDE, 0.5% OCTHYL THIOGLUCOSIDE , PH 6.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 60.15650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.88300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 60.15650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 44.88300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 231 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 ILE A 3 REMARK 465 MET A 4 REMARK 465 GLY A 5 REMARK 465 PRO A 149 REMARK 465 LYS A 150 REMARK 465 GLU A 151 REMARK 465 GLY A 152 REMARK 465 LYS A 153 REMARK 465 GLN A 154 REMARK 465 HIS A 155 REMARK 465 ARG A 309 REMARK 465 GLN A 310 REMARK 465 GLN A 311 REMARK 465 GLU A 312 REMARK 465 PRO A 313 REMARK 465 PHE A 314 REMARK 465 LYS A 315 REMARK 465 ALA A 316 REMARK 465 HIS A 317 REMARK 465 HIS A 318 REMARK 465 HIS A 319 REMARK 465 HIS A 320 REMARK 465 HIS A 321 REMARK 465 HIS A 322 REMARK 465 HIS A 323 REMARK 465 HIS A 324 REMARK 465 HIS A 325 REMARK 465 HIS A 326 REMARK 465 GLU B 213 REMARK 465 CYS B 214 REMARK 465 CYS C 139 REMARK 465 GLY C 140 REMARK 465 ASP C 141 REMARK 465 THR C 142 REMARK 465 SER C 143 REMARK 465 PRO C 226 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 220 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 222 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 212 O CG OD1 ND2 REMARK 470 LYS C 43 CG CD CE NZ REMARK 470 GLY C 225 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CB CYS A 259 SG CYS A 262 1.74 REMARK 500 O ILE B 29 O SER B 31 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 58 -66.94 -107.33 REMARK 500 CYS A 146 -75.80 -91.82 REMARK 500 GLU A 161 66.70 39.13 REMARK 500 PHE A 182 -74.28 -97.37 REMARK 500 VAL A 186 -62.49 -128.54 REMARK 500 LEU A 216 149.82 72.33 REMARK 500 PRO A 260 43.66 -76.92 REMARK 500 ASP A 261 -61.07 -134.66 REMARK 500 PRO A 266 -172.50 -66.33 REMARK 500 SER A 305 -71.71 -117.90 REMARK 500 TYR B 30 -124.64 62.87 REMARK 500 SER B 32 9.31 98.46 REMARK 500 LEU B 47 -64.15 -108.49 REMARK 500 ALA B 51 -26.10 77.37 REMARK 500 SER B 67 166.32 179.98 REMARK 500 ARG B 77 73.91 45.00 REMARK 500 LYS B 169 -70.14 -99.03 REMARK 500 ASN B 190 -61.17 -90.48 REMARK 500 LYS C 43 -73.96 -130.27 REMARK 500 ALA C 92 -177.43 -173.36 REMARK 500 PRO C 137 -166.29 -68.26 REMARK 500 SER C 171 -70.30 -100.31 REMARK 500 SER C 183 -115.27 51.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZMA A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3VG9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN ADENOSINE A2A RECEPTOR WITH AN REMARK 900 ALLOSTERIC INVERSE-AGONIST ANTIBODY AT 2.7 A RESOLUTION DBREF 3VGA A 1 316 UNP P29274 AA2AR_HUMAN 1 316 DBREF 3VGA B 1 214 PDB 3VGA 3VGA 1 214 DBREF 3VGA C 1 226 PDB 3VGA 3VGA 1 226 SEQADV 3VGA GLN A 154 UNP P29274 ASN 154 ENGINEERED MUTATION SEQADV 3VGA HIS A 317 UNP P29274 EXPRESSION TAG SEQADV 3VGA HIS A 318 UNP P29274 EXPRESSION TAG SEQADV 3VGA HIS A 319 UNP P29274 EXPRESSION TAG SEQADV 3VGA HIS A 320 UNP P29274 EXPRESSION TAG SEQADV 3VGA HIS A 321 UNP P29274 EXPRESSION TAG SEQADV 3VGA HIS A 322 UNP P29274 EXPRESSION TAG SEQADV 3VGA HIS A 323 UNP P29274 EXPRESSION TAG SEQADV 3VGA HIS A 324 UNP P29274 EXPRESSION TAG SEQADV 3VGA HIS A 325 UNP P29274 EXPRESSION TAG SEQADV 3VGA HIS A 326 UNP P29274 EXPRESSION TAG SEQRES 1 A 326 MET PRO ILE MET GLY SER SER VAL TYR ILE THR VAL GLU SEQRES 2 A 326 LEU ALA ILE ALA VAL LEU ALA ILE LEU GLY ASN VAL LEU SEQRES 3 A 326 VAL CYS TRP ALA VAL TRP LEU ASN SER ASN LEU GLN ASN SEQRES 4 A 326 VAL THR ASN TYR PHE VAL VAL SER LEU ALA ALA ALA ASP SEQRES 5 A 326 ILE ALA VAL GLY VAL LEU ALA ILE PRO PHE ALA ILE THR SEQRES 6 A 326 ILE SER THR GLY PHE CYS ALA ALA CYS HIS GLY CYS LEU SEQRES 7 A 326 PHE ILE ALA CYS PHE VAL LEU VAL LEU THR GLN SER SER SEQRES 8 A 326 ILE PHE SER LEU LEU ALA ILE ALA ILE ASP ARG TYR ILE SEQRES 9 A 326 ALA ILE ARG ILE PRO LEU ARG TYR ASN GLY LEU VAL THR SEQRES 10 A 326 GLY THR ARG ALA LYS GLY ILE ILE ALA ILE CYS TRP VAL SEQRES 11 A 326 LEU SER PHE ALA ILE GLY LEU THR PRO MET LEU GLY TRP SEQRES 12 A 326 ASN ASN CYS GLY GLN PRO LYS GLU GLY LYS GLN HIS SER SEQRES 13 A 326 GLN GLY CYS GLY GLU GLY GLN VAL ALA CYS LEU PHE GLU SEQRES 14 A 326 ASP VAL VAL PRO MET ASN TYR MET VAL TYR PHE ASN PHE SEQRES 15 A 326 PHE ALA CYS VAL LEU VAL PRO LEU LEU LEU MET LEU GLY SEQRES 16 A 326 VAL TYR LEU ARG ILE PHE LEU ALA ALA ARG ARG GLN LEU SEQRES 17 A 326 LYS GLN MET GLU SER GLN PRO LEU PRO GLY GLU ARG ALA SEQRES 18 A 326 ARG SER THR LEU GLN LYS GLU VAL HIS ALA ALA LYS SER SEQRES 19 A 326 LEU ALA ILE ILE VAL GLY LEU PHE ALA LEU CYS TRP LEU SEQRES 20 A 326 PRO LEU HIS ILE ILE ASN CYS PHE THR PHE PHE CYS PRO SEQRES 21 A 326 ASP CYS SER HIS ALA PRO LEU TRP LEU MET TYR LEU ALA SEQRES 22 A 326 ILE VAL LEU SER HIS THR ASN SER VAL VAL ASN PRO PHE SEQRES 23 A 326 ILE TYR ALA TYR ARG ILE ARG GLU PHE ARG GLN THR PHE SEQRES 24 A 326 ARG LYS ILE ILE ARG SER HIS VAL LEU ARG GLN GLN GLU SEQRES 25 A 326 PRO PHE LYS ALA HIS HIS HIS HIS HIS HIS HIS HIS HIS SEQRES 26 A 326 HIS SEQRES 1 B 214 ASP ILE VAL MET THR GLN SER PRO ALA SER LEU SER ALA SEQRES 2 B 214 SER VAL GLY ASP THR VAL THR ILE THR CYS ARG ALA SER SEQRES 3 B 214 GLU PHE ILE TYR SER SER LEU THR TRP TYR GLN GLN LYS SEQRES 4 B 214 GLN GLY GLY SER PRO GLN LEU LEU VAL TYR ALA ALA THR SEQRES 5 B 214 ASN LEU ALA ASP ALA VAL PRO SER ARG PHE SER GLY SER SEQRES 6 B 214 GLY SER GLY THR GLN PHE SER LEU LYS ILE ASN ARG LEU SEQRES 7 B 214 GLN PRO GLU ASP PHE GLY THR TYR TYR CYS GLN HIS PHE SEQRES 8 B 214 TYR GLY SER THR TRP ALA PHE GLY GLY GLY THR LYS LEU SEQRES 9 B 214 GLU ILE LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE SEQRES 10 B 214 PHE PRO PRO SER SER GLU GLN LEU THR SER GLY GLY ALA SEQRES 11 B 214 SER VAL VAL CYS PHE LEU ASN ASN PHE TYR PRO LYS ASP SEQRES 12 B 214 ILE ASN VAL LYS TRP LYS ILE ASP GLY SER GLU ARG GLN SEQRES 13 B 214 ASN GLY VAL LEU ASN SER TRP THR ASP GLN ASP SER LYS SEQRES 14 B 214 ASP SER THR TYR SER MET SER SER THR LEU THR LEU THR SEQRES 15 B 214 LYS ASP GLU TYR GLU ARG HIS ASN SER TYR THR CYS GLU SEQRES 16 B 214 ALA THR HIS LYS THR SER THR SER PRO ILE VAL LYS SER SEQRES 17 B 214 PHE ASN ARG ASN GLU CYS SEQRES 1 C 226 GLU VAL GLN LEU GLN GLN SER GLY ALA GLU LEU VAL LYS SEQRES 2 C 226 PRO GLY SER SER VAL LYS ILE SER CYS LYS THR SER GLY SEQRES 3 C 226 ASP SER PHE THR ALA TYR ASN MET ASN TRP VAL LYS GLN SEQRES 4 C 226 SER HIS GLY LYS SER LEU GLU TRP ILE GLY ASN ILE ASN SEQRES 5 C 226 PRO TYR TYR GLY SER THR ARG TYR ASN GLN LYS PHE LYS SEQRES 6 C 226 GLY LYS ALA THR LEU THR VAL ASP LYS SER SER SER THR SEQRES 7 C 226 ALA TYR ILE GLN LEU ASN SER LEU THR SER GLU ASP SER SEQRES 8 C 226 ALA VAL TYR TYR CYS ALA ARG GLU GLY ASN TYR TYR ASP SEQRES 9 C 226 GLY GLY SER VAL ARG TYR PHE ASP TYR TRP GLY GLN GLY SEQRES 10 C 226 THR THR LEU THR VAL SER SER ALA LYS THR THR ALA PRO SEQRES 11 C 226 SER VAL TYR PRO LEU ALA PRO VAL CYS GLY ASP THR SER SEQRES 12 C 226 GLY SER SER VAL THR LEU GLY CYS LEU VAL LYS GLY TYR SEQRES 13 C 226 PHE PRO GLU PRO VAL THR LEU THR TRP ASN SER GLY SER SEQRES 14 C 226 LEU SER SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SEQRES 15 C 226 SER ASP LEU TYR THR LEU SER SER SER VAL THR VAL THR SEQRES 16 C 226 SER SER THR TRP PRO SER GLN SER ILE THR CYS ASN VAL SEQRES 17 C 226 ALA HIS PRO ALA SER SER THR LYS VAL ASP LYS LYS ILE SEQRES 18 C 226 GLU PRO ARG GLY PRO HET ZMA A 401 25 HETNAM ZMA 4-{2-[(7-AMINO-2-FURAN-2-YL[1,2,4]TRIAZOLO[1,5-A][1,3, HETNAM 2 ZMA 5]TRIAZIN-5-YL)AMINO]ETHYL}PHENOL FORMUL 4 ZMA C16 H15 N7 O2 FORMUL 5 HOH *14(H2 O) HELIX 1 1 SER A 6 ASN A 34 1 29 HELIX 2 2 SER A 35 GLN A 38 5 4 HELIX 3 3 ASN A 39 LEU A 58 1 20 HELIX 4 4 LEU A 58 ILE A 66 1 9 HELIX 5 5 ALA A 73 CYS A 82 1 10 HELIX 6 6 CYS A 82 ILE A 108 1 27 HELIX 7 7 ILE A 108 VAL A 116 1 9 HELIX 8 8 THR A 117 LEU A 137 1 21 HELIX 9 9 THR A 138 LEU A 141 5 4 HELIX 10 10 LEU A 167 VAL A 172 1 6 HELIX 11 11 PRO A 173 TYR A 179 1 7 HELIX 12 12 VAL A 186 SER A 213 1 28 HELIX 13 13 ALA A 221 PHE A 258 1 38 HELIX 14 14 PRO A 266 THR A 279 1 14 HELIX 15 15 VAL A 282 ILE A 292 1 11 HELIX 16 16 ILE A 292 VAL A 307 1 16 HELIX 17 17 GLN B 79 PHE B 83 5 5 HELIX 18 18 SER B 121 THR B 126 1 6 HELIX 19 19 LYS B 183 GLU B 187 1 5 HELIX 20 20 SER C 28 TYR C 32 5 5 HELIX 21 21 GLN C 62 LYS C 65 5 4 HELIX 22 22 THR C 87 SER C 91 5 5 HELIX 23 23 SER C 167 SER C 169 5 3 HELIX 24 24 PRO C 211 SER C 214 5 4 SHEET 1 A 2 CYS A 71 ALA A 72 0 SHEET 2 A 2 VAL A 164 ALA A 165 -1 O VAL A 164 N ALA A 72 SHEET 1 B 4 MET B 4 SER B 7 0 SHEET 2 B 4 VAL B 19 ALA B 25 -1 O THR B 22 N SER B 7 SHEET 3 B 4 GLN B 70 ILE B 75 -1 O ILE B 75 N VAL B 19 SHEET 4 B 4 PHE B 62 SER B 67 -1 N SER B 63 O LYS B 74 SHEET 1 C 6 SER B 10 ALA B 13 0 SHEET 2 C 6 THR B 102 ILE B 106 1 O GLU B 105 N LEU B 11 SHEET 3 C 6 GLY B 84 HIS B 90 -1 N TYR B 86 O THR B 102 SHEET 4 C 6 LEU B 33 GLN B 38 -1 N TYR B 36 O TYR B 87 SHEET 5 C 6 GLN B 45 TYR B 49 -1 O LEU B 47 N TRP B 35 SHEET 6 C 6 ASN B 53 LEU B 54 -1 O ASN B 53 N TYR B 49 SHEET 1 D 4 SER B 10 ALA B 13 0 SHEET 2 D 4 THR B 102 ILE B 106 1 O GLU B 105 N LEU B 11 SHEET 3 D 4 GLY B 84 HIS B 90 -1 N TYR B 86 O THR B 102 SHEET 4 D 4 ALA B 97 PHE B 98 -1 O ALA B 97 N HIS B 90 SHEET 1 E 4 THR B 114 PHE B 118 0 SHEET 2 E 4 GLY B 129 PHE B 139 -1 O ASN B 137 N THR B 114 SHEET 3 E 4 TYR B 173 THR B 182 -1 O TYR B 173 N PHE B 139 SHEET 4 E 4 VAL B 159 TRP B 163 -1 N SER B 162 O SER B 176 SHEET 1 F 4 SER B 153 ARG B 155 0 SHEET 2 F 4 ASN B 145 ILE B 150 -1 N ILE B 150 O SER B 153 SHEET 3 F 4 SER B 191 HIS B 198 -1 O THR B 193 N LYS B 149 SHEET 4 F 4 SER B 201 ASN B 210 -1 O ILE B 205 N ALA B 196 SHEET 1 G 4 GLN C 3 GLN C 6 0 SHEET 2 G 4 VAL C 18 SER C 25 -1 O LYS C 23 N GLN C 5 SHEET 3 G 4 THR C 78 LEU C 83 -1 O ILE C 81 N ILE C 20 SHEET 4 G 4 ALA C 68 ASP C 73 -1 N THR C 71 O TYR C 80 SHEET 1 H 6 GLU C 10 VAL C 12 0 SHEET 2 H 6 THR C 118 VAL C 122 1 O THR C 119 N GLU C 10 SHEET 3 H 6 ALA C 92 TYR C 103 -1 N ALA C 92 O LEU C 120 SHEET 4 H 6 MET C 34 SER C 40 -1 N GLN C 39 O VAL C 93 SHEET 5 H 6 SER C 44 ILE C 51 -1 O ILE C 51 N MET C 34 SHEET 6 H 6 THR C 58 TYR C 60 -1 O ARG C 59 N ASN C 50 SHEET 1 I 4 GLU C 10 VAL C 12 0 SHEET 2 I 4 THR C 118 VAL C 122 1 O THR C 119 N GLU C 10 SHEET 3 I 4 ALA C 92 TYR C 103 -1 N ALA C 92 O LEU C 120 SHEET 4 I 4 SER C 107 TRP C 114 -1 O TYR C 113 N ARG C 98 SHEET 1 J 4 SER C 131 LEU C 135 0 SHEET 2 J 4 SER C 146 TYR C 156 -1 O GLY C 150 N LEU C 135 SHEET 3 J 4 LEU C 185 THR C 195 -1 O LEU C 188 N VAL C 153 SHEET 4 J 4 VAL C 174 THR C 176 -1 N HIS C 175 O SER C 191 SHEET 1 K 4 SER C 131 LEU C 135 0 SHEET 2 K 4 SER C 146 TYR C 156 -1 O GLY C 150 N LEU C 135 SHEET 3 K 4 LEU C 185 THR C 195 -1 O LEU C 188 N VAL C 153 SHEET 4 K 4 VAL C 180 GLN C 182 -1 N GLN C 182 O LEU C 185 SHEET 1 L 3 THR C 162 TRP C 165 0 SHEET 2 L 3 THR C 205 HIS C 210 -1 O ASN C 207 N THR C 164 SHEET 3 L 3 THR C 215 LYS C 220 -1 O LYS C 219 N CYS C 206 SSBOND 1 CYS A 71 CYS A 159 1555 1555 2.03 SSBOND 2 CYS A 74 CYS A 146 1555 1555 2.03 SSBOND 3 CYS A 77 CYS A 166 1555 1555 2.03 SSBOND 4 CYS A 259 CYS A 262 1555 1555 2.04 SSBOND 5 CYS B 23 CYS B 88 1555 1555 2.04 SSBOND 6 CYS B 134 CYS B 194 1555 1555 2.04 SSBOND 7 CYS C 22 CYS C 96 1555 1555 2.03 SSBOND 8 CYS C 151 CYS C 206 1555 1555 2.03 CISPEP 1 GLY A 218 GLU A 219 0 3.64 CISPEP 2 SER B 7 PRO B 8 0 -6.28 CISPEP 3 TYR B 140 PRO B 141 0 1.62 CISPEP 4 PHE C 157 PRO C 158 0 -7.32 CISPEP 5 GLU C 159 PRO C 160 0 -9.31 CISPEP 6 TRP C 199 PRO C 200 0 0.22 SITE 1 AC1 7 LEU A 85 PHE A 168 GLU A 169 MET A 177 SITE 2 AC1 7 LEU A 249 HIS A 250 MET A 270 CRYST1 120.313 89.766 110.682 90.00 96.14 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008312 0.000000 0.000894 0.00000 SCALE2 0.000000 0.011140 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009087 0.00000