data_3VH7 # _entry.id 3VH7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3VH7 pdb_00003vh7 10.2210/pdb3vh7/pdb RCSB RCSB095040 ? ? WWPDB D_1000095040 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3VGX . unspecified PDB 3VGY . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3VH7 _pdbx_database_status.recvd_initial_deposition_date 2011-08-23 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Yao, X.' 1 'Waltersperger, S.' 2 'Wang, M.T.' 3 'Cui, S.' 4 # _citation.id primary _citation.title 'Structural basis of potent and broad HIV-1 fusion inhibitor CP32M' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 287 _citation.page_first 26618 _citation.page_last 26629 _citation.year 2012 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22679024 _citation.pdbx_database_id_DOI 10.1074/jbc.M112.381079 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yao, X.' 1 ? primary 'Chong, H.' 2 ? primary 'Zhang, C.' 3 ? primary 'Qiu, Z.' 4 ? primary 'Qin, B.' 5 ? primary 'Han, R.' 6 ? primary 'Waltersperger, S.' 7 ? primary 'Wang, M.T.' 8 ? primary 'He, Y.' 9 ? primary 'Cui, S.' 10 ? # _cell.entry_id 3VH7 _cell.length_a 50.506 _cell.length_b 45.504 _cell.length_c 55.514 _cell.angle_alpha 90.00 _cell.angle_beta 107.65 _cell.angle_gamma 90.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3VH7 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Envelope glycoprotein gp160' 6413.350 3 ? ? 'NHR (UNP RESIDUES (546-588)' ? 2 polymer syn CP32M 4295.733 3 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 water nat water 18.015 68 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Env polyprotein, Surface protein gp120, SU, Glycoprotein 120, gp120, Transmembrane protein gp41, TM, Glycoprotein 41, gp41' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no GSAMADIGSEFSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKSGGR GSAMADIGSEFSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKSGGR A,C,E ? 2 'polypeptide(L)' no no GGVEWNEMTWMEWEREIENYTKLIYKILEESQEQ GGVEWNEMTWMEWEREIENYTKLIYKILEESQEQ B,D,F ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 ALA n 1 4 MET n 1 5 ALA n 1 6 ASP n 1 7 ILE n 1 8 GLY n 1 9 SER n 1 10 GLU n 1 11 PHE n 1 12 SER n 1 13 GLY n 1 14 ILE n 1 15 VAL n 1 16 GLN n 1 17 GLN n 1 18 GLN n 1 19 ASN n 1 20 ASN n 1 21 LEU n 1 22 LEU n 1 23 ARG n 1 24 ALA n 1 25 ILE n 1 26 GLU n 1 27 ALA n 1 28 GLN n 1 29 GLN n 1 30 HIS n 1 31 LEU n 1 32 LEU n 1 33 GLN n 1 34 LEU n 1 35 THR n 1 36 VAL n 1 37 TRP n 1 38 GLY n 1 39 ILE n 1 40 LYS n 1 41 GLN n 1 42 LEU n 1 43 GLN n 1 44 ALA n 1 45 ARG n 1 46 ILE n 1 47 LEU n 1 48 ALA n 1 49 VAL n 1 50 GLU n 1 51 ARG n 1 52 TYR n 1 53 LEU n 1 54 LYS n 1 55 SER n 1 56 GLY n 1 57 GLY n 1 58 ARG n 2 1 GLY n 2 2 GLY n 2 3 VAL n 2 4 GLU n 2 5 TRP n 2 6 ASN n 2 7 GLU n 2 8 MET n 2 9 THR n 2 10 TRP n 2 11 MET n 2 12 GLU n 2 13 TRP n 2 14 GLU n 2 15 ARG n 2 16 GLU n 2 17 ILE n 2 18 GLU n 2 19 ASN n 2 20 TYR n 2 21 THR n 2 22 LYS n 2 23 LEU n 2 24 ILE n 2 25 TYR n 2 26 LYS n 2 27 ILE n 2 28 LEU n 2 29 GLU n 2 30 GLU n 2 31 SER n 2 32 GLN n 2 33 GLU n 2 34 GLN n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? 'Human immunodeficiency virus type 1' HIV-1 11676 'This sequence occurs naturally.' 2 1 sample ? ? ? ? ? 'This sequence does not occur naturally, but designed based on sequence of HIV-1 gp41 CHR 621-652.' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP ENV_HV1B1 P03375 1 SGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLK 546 ? 2 PDB 3VH7 3VH7 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3VH7 A 12 ? 54 ? P03375 546 ? 588 ? 546 588 2 1 3VH7 C 12 ? 54 ? P03375 546 ? 588 ? 546 588 3 1 3VH7 E 12 ? 54 ? P03375 546 ? 588 ? 546 588 4 2 3VH7 B 1 ? 34 ? 3VH7 619 ? 652 ? 619 652 5 2 3VH7 D 1 ? 34 ? 3VH7 619 ? 652 ? 619 652 6 2 3VH7 F 1 ? 34 ? 3VH7 619 ? 652 ? 619 652 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3VH7 GLY A 1 ? UNP P03375 ? ? 'expression tag' -10 1 1 3VH7 SER A 2 ? UNP P03375 ? ? 'expression tag' -9 2 1 3VH7 ALA A 3 ? UNP P03375 ? ? 'expression tag' -8 3 1 3VH7 MET A 4 ? UNP P03375 ? ? 'expression tag' -7 4 1 3VH7 ALA A 5 ? UNP P03375 ? ? 'expression tag' -6 5 1 3VH7 ASP A 6 ? UNP P03375 ? ? 'expression tag' -5 6 1 3VH7 ILE A 7 ? UNP P03375 ? ? 'expression tag' -4 7 1 3VH7 GLY A 8 ? UNP P03375 ? ? 'expression tag' -3 8 1 3VH7 SER A 9 ? UNP P03375 ? ? 'expression tag' -2 9 1 3VH7 GLU A 10 ? UNP P03375 ? ? 'expression tag' -1 10 1 3VH7 PHE A 11 ? UNP P03375 ? ? 'expression tag' 0 11 1 3VH7 SER A 55 ? UNP P03375 ? ? 'expression tag' 1000 12 1 3VH7 GLY A 56 ? UNP P03375 ? ? 'expression tag' 1001 13 1 3VH7 GLY A 57 ? UNP P03375 ? ? 'expression tag' 1002 14 1 3VH7 ARG A 58 ? UNP P03375 ? ? 'expression tag' 1003 15 2 3VH7 GLY C 1 ? UNP P03375 ? ? 'expression tag' -10 16 2 3VH7 SER C 2 ? UNP P03375 ? ? 'expression tag' -9 17 2 3VH7 ALA C 3 ? UNP P03375 ? ? 'expression tag' -8 18 2 3VH7 MET C 4 ? UNP P03375 ? ? 'expression tag' -7 19 2 3VH7 ALA C 5 ? UNP P03375 ? ? 'expression tag' -6 20 2 3VH7 ASP C 6 ? UNP P03375 ? ? 'expression tag' -5 21 2 3VH7 ILE C 7 ? UNP P03375 ? ? 'expression tag' -4 22 2 3VH7 GLY C 8 ? UNP P03375 ? ? 'expression tag' -3 23 2 3VH7 SER C 9 ? UNP P03375 ? ? 'expression tag' -2 24 2 3VH7 GLU C 10 ? UNP P03375 ? ? 'expression tag' -1 25 2 3VH7 PHE C 11 ? UNP P03375 ? ? 'expression tag' 0 26 2 3VH7 SER C 55 ? UNP P03375 ? ? 'expression tag' 1000 27 2 3VH7 GLY C 56 ? UNP P03375 ? ? 'expression tag' 1001 28 2 3VH7 GLY C 57 ? UNP P03375 ? ? 'expression tag' 1002 29 2 3VH7 ARG C 58 ? UNP P03375 ? ? 'expression tag' 1003 30 3 3VH7 GLY E 1 ? UNP P03375 ? ? 'expression tag' -10 31 3 3VH7 SER E 2 ? UNP P03375 ? ? 'expression tag' -9 32 3 3VH7 ALA E 3 ? UNP P03375 ? ? 'expression tag' -8 33 3 3VH7 MET E 4 ? UNP P03375 ? ? 'expression tag' -7 34 3 3VH7 ALA E 5 ? UNP P03375 ? ? 'expression tag' -6 35 3 3VH7 ASP E 6 ? UNP P03375 ? ? 'expression tag' -5 36 3 3VH7 ILE E 7 ? UNP P03375 ? ? 'expression tag' -4 37 3 3VH7 GLY E 8 ? UNP P03375 ? ? 'expression tag' -3 38 3 3VH7 SER E 9 ? UNP P03375 ? ? 'expression tag' -2 39 3 3VH7 GLU E 10 ? UNP P03375 ? ? 'expression tag' -1 40 3 3VH7 PHE E 11 ? UNP P03375 ? ? 'expression tag' 0 41 3 3VH7 SER E 55 ? UNP P03375 ? ? 'expression tag' 1000 42 3 3VH7 GLY E 56 ? UNP P03375 ? ? 'expression tag' 1001 43 3 3VH7 GLY E 57 ? UNP P03375 ? ? 'expression tag' 1002 44 3 3VH7 ARG E 58 ? UNP P03375 ? ? 'expression tag' 1003 45 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3VH7 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.89 _exptl_crystal.density_percent_sol 34.99 _exptl_crystal.description 'the entry contains Friedel pairs in F_Plus/Minus columns' _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_details '0.1M MgCl2, 0.1M Sodium acetate, 25% PEG 400, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2011-03-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Bartels Monochromator Crystal Type Si (111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X06DA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X06DA _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000 # _reflns.entry_id 3VH7 _reflns.observed_criterion_sigma_I 3.0 _reflns.observed_criterion_sigma_F 3.0 _reflns.d_resolution_low 42.607 _reflns.d_resolution_high 2.019 _reflns.number_obs 14977 _reflns.number_all ? _reflns.percent_possible_obs 90.8 _reflns.pdbx_Rmerge_I_obs 0.084 _reflns.pdbx_Rsym_value 0.085 _reflns.pdbx_netI_over_sigmaI 7.8 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 1.97 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.02 _reflns_shell.d_res_low 2.14 _reflns_shell.percent_possible_all 63.3 _reflns_shell.Rmerge_I_obs 0.747 _reflns_shell.pdbx_Rsym_value 0.764 _reflns_shell.meanI_over_sigI_obs 1.18 _reflns_shell.pdbx_redundancy 1.24 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3185 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3VH7 _refine.ls_number_reflns_obs 14944 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.45 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 42.607 _refine.ls_d_res_high 2.019 _refine.ls_percent_reflns_obs 93.43 _refine.ls_R_factor_obs 0.2241 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2216 _refine.ls_R_factor_R_free 0.2741 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.01 _refine.ls_number_reflns_R_free 748 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -13.4566 _refine.aniso_B[2][2] 0.6326 _refine.aniso_B[3][3] 12.8240 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -1.8410 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.385 _refine.solvent_model_param_bsol 55.303 _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.86 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'the entry contains Friedel pairs in F_Plus/Minus columns' _refine.pdbx_starting_model 'PDB ID 3F4Y' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.30 _refine.pdbx_overall_phase_error 28.02 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2098 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 68 _refine_hist.number_atoms_total 2167 _refine_hist.d_res_high 2.019 _refine_hist.d_res_low 42.607 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.002 ? ? 2147 'X-RAY DIFFRACTION' ? f_angle_d 0.545 ? ? 2896 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 15.726 ? ? 806 'X-RAY DIFFRACTION' ? f_chiral_restr 0.035 ? ? 315 'X-RAY DIFFRACTION' ? f_plane_restr 0.001 ? ? 366 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.0188 2.1747 2193 0.3192 72.00 0.4042 . . 115 . . . . 'X-RAY DIFFRACTION' . 2.1747 2.3935 2941 0.2406 98.00 0.3025 . . 155 . . . . 'X-RAY DIFFRACTION' . 2.3935 2.7398 2976 0.2110 99.00 0.2555 . . 157 . . . . 'X-RAY DIFFRACTION' . 2.7398 3.4517 3021 0.1866 99.00 0.2433 . . 159 . . . . 'X-RAY DIFFRACTION' . 3.4517 42.6161 3065 0.2217 99.00 0.2662 . . 162 . . . . # _struct.entry_id 3VH7 _struct.title 'Structure of HIV-1 gp41 NHR/fusion inhibitor complex P21' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3VH7 _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN/INHIBITOR' _struct_keywords.text '6-helix bundle, membrane fusion inhibition, MEMBRANE PROTEIN-INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 1 ? F N N 2 ? G N N 3 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 4 ? M N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 5 ? GLY A 56 ? ALA A -6 GLY A 1001 1 ? 52 HELX_P HELX_P2 2 THR B 9 ? GLU B 33 ? THR B 627 GLU B 651 1 ? 25 HELX_P HELX_P3 3 MET C 4 ? LEU C 53 ? MET C -7 LEU C 587 1 ? 50 HELX_P HELX_P4 4 GLU D 4 ? GLN D 32 ? GLU D 622 GLN D 650 1 ? 29 HELX_P HELX_P5 5 ALA E 3 ? GLY E 57 ? ALA E -8 GLY E 1002 1 ? 55 HELX_P HELX_P6 6 GLU F 4 ? GLN F 32 ? GLU F 622 GLN F 650 1 ? 29 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id metalc1 _struct_conn.conn_type_id metalc _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id G _struct_conn.ptnr1_label_comp_id MG _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_label_atom_id MG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id L _struct_conn.ptnr2_label_comp_id HOH _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id O _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id E _struct_conn.ptnr1_auth_comp_id MG _struct_conn.ptnr1_auth_seq_id 1101 _struct_conn.ptnr2_auth_asym_id E _struct_conn.ptnr2_auth_comp_id HOH _struct_conn.ptnr2_auth_seq_id 1206 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.972 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASN _struct_mon_prot_cis.label_seq_id 6 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASN _struct_mon_prot_cis.auth_seq_id 624 _struct_mon_prot_cis.auth_asym_id B _struct_mon_prot_cis.pdbx_label_comp_id_2 GLU _struct_mon_prot_cis.pdbx_label_seq_id_2 7 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 GLU _struct_mon_prot_cis.pdbx_auth_seq_id_2 625 _struct_mon_prot_cis.pdbx_auth_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 15.56 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id E _struct_site.pdbx_auth_comp_id MG _struct_site.pdbx_auth_seq_id 1101 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 2 _struct_site.details 'BINDING SITE FOR RESIDUE MG E 1101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 HIS E 30 ? HIS E 564 . ? 1_555 ? 2 AC1 2 HOH L . ? HOH E 1206 . ? 1_555 ? # _database_PDB_matrix.entry_id 3VH7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3VH7 _atom_sites.fract_transf_matrix[1][1] 0.019800 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006300 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021976 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018903 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H MG N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -10 ? ? ? A . n A 1 2 SER 2 -9 ? ? ? A . n A 1 3 ALA 3 -8 ? ? ? A . n A 1 4 MET 4 -7 ? ? ? A . n A 1 5 ALA 5 -6 -6 ALA ALA A . n A 1 6 ASP 6 -5 -5 ASP ASP A . n A 1 7 ILE 7 -4 -4 ILE ILE A . n A 1 8 GLY 8 -3 -3 GLY GLY A . n A 1 9 SER 9 -2 -2 SER SER A . n A 1 10 GLU 10 -1 -1 GLU GLU A . n A 1 11 PHE 11 0 0 PHE PHE A . n A 1 12 SER 12 546 546 SER SER A . n A 1 13 GLY 13 547 547 GLY GLY A . n A 1 14 ILE 14 548 548 ILE ILE A . n A 1 15 VAL 15 549 549 VAL VAL A . n A 1 16 GLN 16 550 550 GLN GLN A . n A 1 17 GLN 17 551 551 GLN GLN A . n A 1 18 GLN 18 552 552 GLN GLN A . n A 1 19 ASN 19 553 553 ASN ASN A . n A 1 20 ASN 20 554 554 ASN ASN A . n A 1 21 LEU 21 555 555 LEU LEU A . n A 1 22 LEU 22 556 556 LEU LEU A . n A 1 23 ARG 23 557 557 ARG ARG A . n A 1 24 ALA 24 558 558 ALA ALA A . n A 1 25 ILE 25 559 559 ILE ILE A . n A 1 26 GLU 26 560 560 GLU GLU A . n A 1 27 ALA 27 561 561 ALA ALA A . n A 1 28 GLN 28 562 562 GLN GLN A . n A 1 29 GLN 29 563 563 GLN GLN A . n A 1 30 HIS 30 564 564 HIS HIS A . n A 1 31 LEU 31 565 565 LEU LEU A . n A 1 32 LEU 32 566 566 LEU LEU A . n A 1 33 GLN 33 567 567 GLN GLN A . n A 1 34 LEU 34 568 568 LEU LEU A . n A 1 35 THR 35 569 569 THR THR A . n A 1 36 VAL 36 570 570 VAL VAL A . n A 1 37 TRP 37 571 571 TRP TRP A . n A 1 38 GLY 38 572 572 GLY GLY A . n A 1 39 ILE 39 573 573 ILE ILE A . n A 1 40 LYS 40 574 574 LYS LYS A . n A 1 41 GLN 41 575 575 GLN GLN A . n A 1 42 LEU 42 576 576 LEU LEU A . n A 1 43 GLN 43 577 577 GLN GLN A . n A 1 44 ALA 44 578 578 ALA ALA A . n A 1 45 ARG 45 579 579 ARG ARG A . n A 1 46 ILE 46 580 580 ILE ILE A . n A 1 47 LEU 47 581 581 LEU LEU A . n A 1 48 ALA 48 582 582 ALA ALA A . n A 1 49 VAL 49 583 583 VAL VAL A . n A 1 50 GLU 50 584 584 GLU GLU A . n A 1 51 ARG 51 585 585 ARG ARG A . n A 1 52 TYR 52 586 586 TYR TYR A . n A 1 53 LEU 53 587 587 LEU LEU A . n A 1 54 LYS 54 588 588 LYS LYS A . n A 1 55 SER 55 1000 1000 SER SER A . n A 1 56 GLY 56 1001 1001 GLY GLY A . n A 1 57 GLY 57 1002 ? ? ? A . n A 1 58 ARG 58 1003 ? ? ? A . n B 2 1 GLY 1 619 ? ? ? B . n B 2 2 GLY 2 620 ? ? ? B . n B 2 3 VAL 3 621 ? ? ? B . n B 2 4 GLU 4 622 622 GLU GLU B . n B 2 5 TRP 5 623 623 TRP TRP B . n B 2 6 ASN 6 624 624 ASN ASN B . n B 2 7 GLU 7 625 625 GLU GLU B . n B 2 8 MET 8 626 626 MET MET B . n B 2 9 THR 9 627 627 THR THR B . n B 2 10 TRP 10 628 628 TRP TRP B . n B 2 11 MET 11 629 629 MET MET B . n B 2 12 GLU 12 630 630 GLU GLU B . n B 2 13 TRP 13 631 631 TRP TRP B . n B 2 14 GLU 14 632 632 GLU GLU B . n B 2 15 ARG 15 633 633 ARG ARG B . n B 2 16 GLU 16 634 634 GLU GLU B . n B 2 17 ILE 17 635 635 ILE ILE B . n B 2 18 GLU 18 636 636 GLU GLU B . n B 2 19 ASN 19 637 637 ASN ASN B . n B 2 20 TYR 20 638 638 TYR TYR B . n B 2 21 THR 21 639 639 THR THR B . n B 2 22 LYS 22 640 640 LYS LYS B . n B 2 23 LEU 23 641 641 LEU LEU B . n B 2 24 ILE 24 642 642 ILE ILE B . n B 2 25 TYR 25 643 643 TYR TYR B . n B 2 26 LYS 26 644 644 LYS LYS B . n B 2 27 ILE 27 645 645 ILE ILE B . n B 2 28 LEU 28 646 646 LEU LEU B . n B 2 29 GLU 29 647 647 GLU GLU B . n B 2 30 GLU 30 648 648 GLU GLU B . n B 2 31 SER 31 649 649 SER SER B . n B 2 32 GLN 32 650 650 GLN GLN B . n B 2 33 GLU 33 651 651 GLU GLU B . n B 2 34 GLN 34 652 ? ? ? B . n C 1 1 GLY 1 -10 ? ? ? C . n C 1 2 SER 2 -9 ? ? ? C . n C 1 3 ALA 3 -8 -8 ALA ALA C . n C 1 4 MET 4 -7 -7 MET MET C . n C 1 5 ALA 5 -6 -6 ALA ALA C . n C 1 6 ASP 6 -5 -5 ASP ASP C . n C 1 7 ILE 7 -4 -4 ILE ILE C . n C 1 8 GLY 8 -3 -3 GLY GLY C . n C 1 9 SER 9 -2 -2 SER SER C . n C 1 10 GLU 10 -1 -1 GLU GLU C . n C 1 11 PHE 11 0 0 PHE PHE C . n C 1 12 SER 12 546 546 SER SER C . n C 1 13 GLY 13 547 547 GLY GLY C . n C 1 14 ILE 14 548 548 ILE ILE C . n C 1 15 VAL 15 549 549 VAL VAL C . n C 1 16 GLN 16 550 550 GLN GLN C . n C 1 17 GLN 17 551 551 GLN GLN C . n C 1 18 GLN 18 552 552 GLN GLN C . n C 1 19 ASN 19 553 553 ASN ASN C . n C 1 20 ASN 20 554 554 ASN ASN C . n C 1 21 LEU 21 555 555 LEU LEU C . n C 1 22 LEU 22 556 556 LEU LEU C . n C 1 23 ARG 23 557 557 ARG ARG C . n C 1 24 ALA 24 558 558 ALA ALA C . n C 1 25 ILE 25 559 559 ILE ILE C . n C 1 26 GLU 26 560 560 GLU GLU C . n C 1 27 ALA 27 561 561 ALA ALA C . n C 1 28 GLN 28 562 562 GLN GLN C . n C 1 29 GLN 29 563 563 GLN GLN C . n C 1 30 HIS 30 564 564 HIS HIS C . n C 1 31 LEU 31 565 565 LEU LEU C . n C 1 32 LEU 32 566 566 LEU LEU C . n C 1 33 GLN 33 567 567 GLN GLN C . n C 1 34 LEU 34 568 568 LEU LEU C . n C 1 35 THR 35 569 569 THR THR C . n C 1 36 VAL 36 570 570 VAL VAL C . n C 1 37 TRP 37 571 571 TRP TRP C . n C 1 38 GLY 38 572 572 GLY GLY C . n C 1 39 ILE 39 573 573 ILE ILE C . n C 1 40 LYS 40 574 574 LYS LYS C . n C 1 41 GLN 41 575 575 GLN GLN C . n C 1 42 LEU 42 576 576 LEU LEU C . n C 1 43 GLN 43 577 577 GLN GLN C . n C 1 44 ALA 44 578 578 ALA ALA C . n C 1 45 ARG 45 579 579 ARG ARG C . n C 1 46 ILE 46 580 580 ILE ILE C . n C 1 47 LEU 47 581 581 LEU LEU C . n C 1 48 ALA 48 582 582 ALA ALA C . n C 1 49 VAL 49 583 583 VAL VAL C . n C 1 50 GLU 50 584 584 GLU GLU C . n C 1 51 ARG 51 585 585 ARG ARG C . n C 1 52 TYR 52 586 586 TYR TYR C . n C 1 53 LEU 53 587 587 LEU LEU C . n C 1 54 LYS 54 588 ? ? ? C . n C 1 55 SER 55 1000 ? ? ? C . n C 1 56 GLY 56 1001 ? ? ? C . n C 1 57 GLY 57 1002 ? ? ? C . n C 1 58 ARG 58 1003 ? ? ? C . n D 2 1 GLY 1 619 ? ? ? D . n D 2 2 GLY 2 620 ? ? ? D . n D 2 3 VAL 3 621 621 VAL VAL D . n D 2 4 GLU 4 622 622 GLU GLU D . n D 2 5 TRP 5 623 623 TRP TRP D . n D 2 6 ASN 6 624 624 ASN ASN D . n D 2 7 GLU 7 625 625 GLU GLU D . n D 2 8 MET 8 626 626 MET MET D . n D 2 9 THR 9 627 627 THR THR D . n D 2 10 TRP 10 628 628 TRP TRP D . n D 2 11 MET 11 629 629 MET MET D . n D 2 12 GLU 12 630 630 GLU GLU D . n D 2 13 TRP 13 631 631 TRP TRP D . n D 2 14 GLU 14 632 632 GLU GLU D . n D 2 15 ARG 15 633 633 ARG ARG D . n D 2 16 GLU 16 634 634 GLU GLU D . n D 2 17 ILE 17 635 635 ILE ILE D . n D 2 18 GLU 18 636 636 GLU GLU D . n D 2 19 ASN 19 637 637 ASN ASN D . n D 2 20 TYR 20 638 638 TYR TYR D . n D 2 21 THR 21 639 639 THR THR D . n D 2 22 LYS 22 640 640 LYS LYS D . n D 2 23 LEU 23 641 641 LEU LEU D . n D 2 24 ILE 24 642 642 ILE ILE D . n D 2 25 TYR 25 643 643 TYR TYR D . n D 2 26 LYS 26 644 644 LYS LYS D . n D 2 27 ILE 27 645 645 ILE ILE D . n D 2 28 LEU 28 646 646 LEU LEU D . n D 2 29 GLU 29 647 647 GLU GLU D . n D 2 30 GLU 30 648 648 GLU GLU D . n D 2 31 SER 31 649 649 SER SER D . n D 2 32 GLN 32 650 650 GLN GLN D . n D 2 33 GLU 33 651 651 GLU GLU D . n D 2 34 GLN 34 652 ? ? ? D . n E 1 1 GLY 1 -10 ? ? ? E . n E 1 2 SER 2 -9 -9 SER SER E . n E 1 3 ALA 3 -8 -8 ALA ALA E . n E 1 4 MET 4 -7 -7 MET MET E . n E 1 5 ALA 5 -6 -6 ALA ALA E . n E 1 6 ASP 6 -5 -5 ASP ASP E . n E 1 7 ILE 7 -4 -4 ILE ILE E . n E 1 8 GLY 8 -3 -3 GLY GLY E . n E 1 9 SER 9 -2 -2 SER SER E . n E 1 10 GLU 10 -1 -1 GLU GLU E . n E 1 11 PHE 11 0 0 PHE PHE E . n E 1 12 SER 12 546 546 SER SER E . n E 1 13 GLY 13 547 547 GLY GLY E . n E 1 14 ILE 14 548 548 ILE ILE E . n E 1 15 VAL 15 549 549 VAL VAL E . n E 1 16 GLN 16 550 550 GLN GLN E . n E 1 17 GLN 17 551 551 GLN GLN E . n E 1 18 GLN 18 552 552 GLN GLN E . n E 1 19 ASN 19 553 553 ASN ASN E . n E 1 20 ASN 20 554 554 ASN ASN E . n E 1 21 LEU 21 555 555 LEU LEU E . n E 1 22 LEU 22 556 556 LEU LEU E . n E 1 23 ARG 23 557 557 ARG ARG E . n E 1 24 ALA 24 558 558 ALA ALA E . n E 1 25 ILE 25 559 559 ILE ILE E . n E 1 26 GLU 26 560 560 GLU GLU E . n E 1 27 ALA 27 561 561 ALA ALA E . n E 1 28 GLN 28 562 562 GLN GLN E . n E 1 29 GLN 29 563 563 GLN GLN E . n E 1 30 HIS 30 564 564 HIS HIS E . n E 1 31 LEU 31 565 565 LEU LEU E . n E 1 32 LEU 32 566 566 LEU LEU E . n E 1 33 GLN 33 567 567 GLN GLN E . n E 1 34 LEU 34 568 568 LEU LEU E . n E 1 35 THR 35 569 569 THR THR E . n E 1 36 VAL 36 570 570 VAL VAL E . n E 1 37 TRP 37 571 571 TRP TRP E . n E 1 38 GLY 38 572 572 GLY GLY E . n E 1 39 ILE 39 573 573 ILE ILE E . n E 1 40 LYS 40 574 574 LYS LYS E . n E 1 41 GLN 41 575 575 GLN GLN E . n E 1 42 LEU 42 576 576 LEU LEU E . n E 1 43 GLN 43 577 577 GLN GLN E . n E 1 44 ALA 44 578 578 ALA ALA E . n E 1 45 ARG 45 579 579 ARG ARG E . n E 1 46 ILE 46 580 580 ILE ILE E . n E 1 47 LEU 47 581 581 LEU LEU E . n E 1 48 ALA 48 582 582 ALA ALA E . n E 1 49 VAL 49 583 583 VAL VAL E . n E 1 50 GLU 50 584 584 GLU GLU E . n E 1 51 ARG 51 585 585 ARG ARG E . n E 1 52 TYR 52 586 586 TYR TYR E . n E 1 53 LEU 53 587 587 LEU LEU E . n E 1 54 LYS 54 588 588 LYS LYS E . n E 1 55 SER 55 1000 1000 SER SER E . n E 1 56 GLY 56 1001 1001 GLY GLY E . n E 1 57 GLY 57 1002 1002 GLY GLY E . n E 1 58 ARG 58 1003 ? ? ? E . n F 2 1 GLY 1 619 ? ? ? F . n F 2 2 GLY 2 620 ? ? ? F . n F 2 3 VAL 3 621 621 VAL VAL F . n F 2 4 GLU 4 622 622 GLU GLU F . n F 2 5 TRP 5 623 623 TRP TRP F . n F 2 6 ASN 6 624 624 ASN ASN F . n F 2 7 GLU 7 625 625 GLU GLU F . n F 2 8 MET 8 626 626 MET MET F . n F 2 9 THR 9 627 627 THR THR F . n F 2 10 TRP 10 628 628 TRP TRP F . n F 2 11 MET 11 629 629 MET MET F . n F 2 12 GLU 12 630 630 GLU GLU F . n F 2 13 TRP 13 631 631 TRP TRP F . n F 2 14 GLU 14 632 632 GLU GLU F . n F 2 15 ARG 15 633 633 ARG ARG F . n F 2 16 GLU 16 634 634 GLU GLU F . n F 2 17 ILE 17 635 635 ILE ILE F . n F 2 18 GLU 18 636 636 GLU GLU F . n F 2 19 ASN 19 637 637 ASN ASN F . n F 2 20 TYR 20 638 638 TYR TYR F . n F 2 21 THR 21 639 639 THR THR F . n F 2 22 LYS 22 640 640 LYS LYS F . n F 2 23 LEU 23 641 641 LEU LEU F . n F 2 24 ILE 24 642 642 ILE ILE F . n F 2 25 TYR 25 643 643 TYR TYR F . n F 2 26 LYS 26 644 644 LYS LYS F . n F 2 27 ILE 27 645 645 ILE ILE F . n F 2 28 LEU 28 646 646 LEU LEU F . n F 2 29 GLU 29 647 647 GLU GLU F . n F 2 30 GLU 30 648 648 GLU GLU F . n F 2 31 SER 31 649 649 SER SER F . n F 2 32 GLN 32 650 650 GLN GLN F . n F 2 33 GLU 33 651 651 GLU GLU F . n F 2 34 GLN 34 652 ? ? ? F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 MG 1 1101 1 MG MG E . H 4 HOH 1 1101 2 HOH HOH A . H 4 HOH 2 1102 3 HOH HOH A . H 4 HOH 3 1103 4 HOH HOH A . H 4 HOH 4 1104 5 HOH HOH A . H 4 HOH 5 1105 6 HOH HOH A . H 4 HOH 6 1106 7 HOH HOH A . H 4 HOH 7 1107 8 HOH HOH A . H 4 HOH 8 1108 9 HOH HOH A . H 4 HOH 9 1109 11 HOH HOH A . H 4 HOH 10 1110 12 HOH HOH A . H 4 HOH 11 1111 58 HOH HOH A . H 4 HOH 12 1112 62 HOH HOH A . I 4 HOH 1 701 13 HOH HOH B . I 4 HOH 2 702 14 HOH HOH B . I 4 HOH 3 703 15 HOH HOH B . I 4 HOH 4 704 16 HOH HOH B . I 4 HOH 5 705 17 HOH HOH B . I 4 HOH 6 706 18 HOH HOH B . I 4 HOH 7 707 19 HOH HOH B . I 4 HOH 8 708 20 HOH HOH B . I 4 HOH 9 709 21 HOH HOH B . I 4 HOH 10 710 22 HOH HOH B . I 4 HOH 11 711 23 HOH HOH B . I 4 HOH 12 712 24 HOH HOH B . I 4 HOH 13 713 67 HOH HOH B . J 4 HOH 1 1101 1 HOH HOH C . J 4 HOH 2 1102 25 HOH HOH C . J 4 HOH 3 1103 26 HOH HOH C . J 4 HOH 4 1104 27 HOH HOH C . J 4 HOH 5 1105 28 HOH HOH C . J 4 HOH 6 1106 30 HOH HOH C . J 4 HOH 7 1107 31 HOH HOH C . J 4 HOH 8 1108 55 HOH HOH C . K 4 HOH 1 701 10 HOH HOH D . K 4 HOH 2 702 29 HOH HOH D . K 4 HOH 3 703 32 HOH HOH D . K 4 HOH 4 704 33 HOH HOH D . K 4 HOH 5 705 34 HOH HOH D . K 4 HOH 6 706 60 HOH HOH D . K 4 HOH 7 707 69 HOH HOH D . L 4 HOH 1 1201 35 HOH HOH E . L 4 HOH 2 1202 36 HOH HOH E . L 4 HOH 3 1203 37 HOH HOH E . L 4 HOH 4 1204 38 HOH HOH E . L 4 HOH 5 1205 39 HOH HOH E . L 4 HOH 6 1206 40 HOH HOH E . L 4 HOH 7 1207 41 HOH HOH E . L 4 HOH 8 1208 42 HOH HOH E . L 4 HOH 9 1209 43 HOH HOH E . L 4 HOH 10 1210 52 HOH HOH E . L 4 HOH 11 1211 54 HOH HOH E . L 4 HOH 12 1212 56 HOH HOH E . L 4 HOH 13 1213 57 HOH HOH E . L 4 HOH 14 1214 59 HOH HOH E . L 4 HOH 15 1215 63 HOH HOH E . L 4 HOH 16 1216 65 HOH HOH E . M 4 HOH 1 701 44 HOH HOH F . M 4 HOH 2 702 45 HOH HOH F . M 4 HOH 3 703 46 HOH HOH F . M 4 HOH 4 704 47 HOH HOH F . M 4 HOH 5 705 48 HOH HOH F . M 4 HOH 6 706 49 HOH HOH F . M 4 HOH 7 707 50 HOH HOH F . M 4 HOH 8 708 51 HOH HOH F . M 4 HOH 9 709 53 HOH HOH F . M 4 HOH 10 710 61 HOH HOH F . M 4 HOH 11 711 66 HOH HOH F . M 4 HOH 12 712 68 HOH HOH F . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 11760 ? 1 MORE -108 ? 1 'SSA (A^2)' 13690 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-06-13 2 'Structure model' 1 1 2013-06-26 3 'Structure model' 1 2 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal RemDAq 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.6.1_357)' ? 3 XDS 'data reduction' package ? 4 XDS 'data scaling' package ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE1 B GLN 650 ? ? O B HOH 711 ? ? 2.05 2 1 OE1 F GLU 647 ? ? O F HOH 705 ? ? 2.06 3 1 O F GLU 651 ? ? O F HOH 706 ? ? 2.16 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA E -8 ? ? -50.50 -70.81 2 1 GLN F 650 ? ? -96.55 39.26 # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 0 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id B _pdbx_unobs_or_zero_occ_atoms.auth_comp_id ASN _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 624 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id CA _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id B _pdbx_unobs_or_zero_occ_atoms.label_comp_id ASN _pdbx_unobs_or_zero_occ_atoms.label_seq_id 6 _pdbx_unobs_or_zero_occ_atoms.label_atom_id CA # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -10 ? A GLY 1 2 1 Y 1 A SER -9 ? A SER 2 3 1 Y 1 A ALA -8 ? A ALA 3 4 1 Y 1 A MET -7 ? A MET 4 5 1 Y 1 A GLY 1002 ? A GLY 57 6 1 Y 1 A ARG 1003 ? A ARG 58 7 1 Y 1 B GLY 619 ? B GLY 1 8 1 Y 1 B GLY 620 ? B GLY 2 9 1 Y 1 B VAL 621 ? B VAL 3 10 1 Y 1 B GLN 652 ? B GLN 34 11 1 Y 1 C GLY -10 ? C GLY 1 12 1 Y 1 C SER -9 ? C SER 2 13 1 Y 1 C LYS 588 ? C LYS 54 14 1 Y 1 C SER 1000 ? C SER 55 15 1 Y 1 C GLY 1001 ? C GLY 56 16 1 Y 1 C GLY 1002 ? C GLY 57 17 1 Y 1 C ARG 1003 ? C ARG 58 18 1 Y 1 D GLY 619 ? D GLY 1 19 1 Y 1 D GLY 620 ? D GLY 2 20 1 Y 1 D GLN 652 ? D GLN 34 21 1 Y 1 E GLY -10 ? E GLY 1 22 1 Y 1 E ARG 1003 ? E ARG 58 23 1 Y 1 F GLY 619 ? F GLY 1 24 1 Y 1 F GLY 620 ? F GLY 2 25 1 Y 1 F GLN 652 ? F GLN 34 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 MG MG MG N N 236 PHE N N N N 237 PHE CA C N S 238 PHE C C N N 239 PHE O O N N 240 PHE CB C N N 241 PHE CG C Y N 242 PHE CD1 C Y N 243 PHE CD2 C Y N 244 PHE CE1 C Y N 245 PHE CE2 C Y N 246 PHE CZ C Y N 247 PHE OXT O N N 248 PHE H H N N 249 PHE H2 H N N 250 PHE HA H N N 251 PHE HB2 H N N 252 PHE HB3 H N N 253 PHE HD1 H N N 254 PHE HD2 H N N 255 PHE HE1 H N N 256 PHE HE2 H N N 257 PHE HZ H N N 258 PHE HXT H N N 259 SER N N N N 260 SER CA C N S 261 SER C C N N 262 SER O O N N 263 SER CB C N N 264 SER OG O N N 265 SER OXT O N N 266 SER H H N N 267 SER H2 H N N 268 SER HA H N N 269 SER HB2 H N N 270 SER HB3 H N N 271 SER HG H N N 272 SER HXT H N N 273 THR N N N N 274 THR CA C N S 275 THR C C N N 276 THR O O N N 277 THR CB C N R 278 THR OG1 O N N 279 THR CG2 C N N 280 THR OXT O N N 281 THR H H N N 282 THR H2 H N N 283 THR HA H N N 284 THR HB H N N 285 THR HG1 H N N 286 THR HG21 H N N 287 THR HG22 H N N 288 THR HG23 H N N 289 THR HXT H N N 290 TRP N N N N 291 TRP CA C N S 292 TRP C C N N 293 TRP O O N N 294 TRP CB C N N 295 TRP CG C Y N 296 TRP CD1 C Y N 297 TRP CD2 C Y N 298 TRP NE1 N Y N 299 TRP CE2 C Y N 300 TRP CE3 C Y N 301 TRP CZ2 C Y N 302 TRP CZ3 C Y N 303 TRP CH2 C Y N 304 TRP OXT O N N 305 TRP H H N N 306 TRP H2 H N N 307 TRP HA H N N 308 TRP HB2 H N N 309 TRP HB3 H N N 310 TRP HD1 H N N 311 TRP HE1 H N N 312 TRP HE3 H N N 313 TRP HZ2 H N N 314 TRP HZ3 H N N 315 TRP HH2 H N N 316 TRP HXT H N N 317 TYR N N N N 318 TYR CA C N S 319 TYR C C N N 320 TYR O O N N 321 TYR CB C N N 322 TYR CG C Y N 323 TYR CD1 C Y N 324 TYR CD2 C Y N 325 TYR CE1 C Y N 326 TYR CE2 C Y N 327 TYR CZ C Y N 328 TYR OH O N N 329 TYR OXT O N N 330 TYR H H N N 331 TYR H2 H N N 332 TYR HA H N N 333 TYR HB2 H N N 334 TYR HB3 H N N 335 TYR HD1 H N N 336 TYR HD2 H N N 337 TYR HE1 H N N 338 TYR HE2 H N N 339 TYR HH H N N 340 TYR HXT H N N 341 VAL N N N N 342 VAL CA C N S 343 VAL C C N N 344 VAL O O N N 345 VAL CB C N N 346 VAL CG1 C N N 347 VAL CG2 C N N 348 VAL OXT O N N 349 VAL H H N N 350 VAL H2 H N N 351 VAL HA H N N 352 VAL HB H N N 353 VAL HG11 H N N 354 VAL HG12 H N N 355 VAL HG13 H N N 356 VAL HG21 H N N 357 VAL HG22 H N N 358 VAL HG23 H N N 359 VAL HXT H N N 360 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 SER N CA sing N N 247 SER N H sing N N 248 SER N H2 sing N N 249 SER CA C sing N N 250 SER CA CB sing N N 251 SER CA HA sing N N 252 SER C O doub N N 253 SER C OXT sing N N 254 SER CB OG sing N N 255 SER CB HB2 sing N N 256 SER CB HB3 sing N N 257 SER OG HG sing N N 258 SER OXT HXT sing N N 259 THR N CA sing N N 260 THR N H sing N N 261 THR N H2 sing N N 262 THR CA C sing N N 263 THR CA CB sing N N 264 THR CA HA sing N N 265 THR C O doub N N 266 THR C OXT sing N N 267 THR CB OG1 sing N N 268 THR CB CG2 sing N N 269 THR CB HB sing N N 270 THR OG1 HG1 sing N N 271 THR CG2 HG21 sing N N 272 THR CG2 HG22 sing N N 273 THR CG2 HG23 sing N N 274 THR OXT HXT sing N N 275 TRP N CA sing N N 276 TRP N H sing N N 277 TRP N H2 sing N N 278 TRP CA C sing N N 279 TRP CA CB sing N N 280 TRP CA HA sing N N 281 TRP C O doub N N 282 TRP C OXT sing N N 283 TRP CB CG sing N N 284 TRP CB HB2 sing N N 285 TRP CB HB3 sing N N 286 TRP CG CD1 doub Y N 287 TRP CG CD2 sing Y N 288 TRP CD1 NE1 sing Y N 289 TRP CD1 HD1 sing N N 290 TRP CD2 CE2 doub Y N 291 TRP CD2 CE3 sing Y N 292 TRP NE1 CE2 sing Y N 293 TRP NE1 HE1 sing N N 294 TRP CE2 CZ2 sing Y N 295 TRP CE3 CZ3 doub Y N 296 TRP CE3 HE3 sing N N 297 TRP CZ2 CH2 doub Y N 298 TRP CZ2 HZ2 sing N N 299 TRP CZ3 CH2 sing Y N 300 TRP CZ3 HZ3 sing N N 301 TRP CH2 HH2 sing N N 302 TRP OXT HXT sing N N 303 TYR N CA sing N N 304 TYR N H sing N N 305 TYR N H2 sing N N 306 TYR CA C sing N N 307 TYR CA CB sing N N 308 TYR CA HA sing N N 309 TYR C O doub N N 310 TYR C OXT sing N N 311 TYR CB CG sing N N 312 TYR CB HB2 sing N N 313 TYR CB HB3 sing N N 314 TYR CG CD1 doub Y N 315 TYR CG CD2 sing Y N 316 TYR CD1 CE1 sing Y N 317 TYR CD1 HD1 sing N N 318 TYR CD2 CE2 doub Y N 319 TYR CD2 HD2 sing N N 320 TYR CE1 CZ doub Y N 321 TYR CE1 HE1 sing N N 322 TYR CE2 CZ sing Y N 323 TYR CE2 HE2 sing N N 324 TYR CZ OH sing N N 325 TYR OH HH sing N N 326 TYR OXT HXT sing N N 327 VAL N CA sing N N 328 VAL N H sing N N 329 VAL N H2 sing N N 330 VAL CA C sing N N 331 VAL CA CB sing N N 332 VAL CA HA sing N N 333 VAL C O doub N N 334 VAL C OXT sing N N 335 VAL CB CG1 sing N N 336 VAL CB CG2 sing N N 337 VAL CB HB sing N N 338 VAL CG1 HG11 sing N N 339 VAL CG1 HG12 sing N N 340 VAL CG1 HG13 sing N N 341 VAL CG2 HG21 sing N N 342 VAL CG2 HG22 sing N N 343 VAL CG2 HG23 sing N N 344 VAL OXT HXT sing N N 345 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'MAGNESIUM ION' MG 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3F4Y _pdbx_initial_refinement_model.details 'PDB ID 3F4Y' #