data_3VIR # _entry.id 3VIR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3VIR pdb_00003vir 10.2210/pdb3vir/pdb RCSB RCSB095095 ? ? WWPDB D_1000095095 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-08-22 2 'Structure model' 1 1 2018-02-14 3 'Structure model' 1 2 2020-07-29 4 'Structure model' 1 3 2024-03-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Experimental preparation' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Structure summary' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' exptl_crystal_grow 2 3 'Structure model' chem_comp 3 3 'Structure model' entity 4 3 'Structure model' pdbx_chem_comp_identifier 5 3 'Structure model' pdbx_entity_nonpoly 6 3 'Structure model' struct_site 7 3 'Structure model' struct_site_gen 8 4 'Structure model' chem_comp 9 4 'Structure model' chem_comp_atom 10 4 'Structure model' chem_comp_bond 11 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_exptl_crystal_grow.pdbx_details' 2 2 'Structure model' '_exptl_crystal_grow.temp' 3 3 'Structure model' '_chem_comp.mon_nstd_flag' 4 3 'Structure model' '_chem_comp.name' 5 3 'Structure model' '_chem_comp.type' 6 3 'Structure model' '_entity.pdbx_description' 7 3 'Structure model' '_pdbx_entity_nonpoly.name' 8 4 'Structure model' '_chem_comp.pdbx_synonyms' 9 4 'Structure model' '_database_2.pdbx_DOI' 10 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3VIR _pdbx_database_status.recvd_initial_deposition_date 2011-10-06 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3VIQ _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kuwabara, N.' 1 'Yamada, N.' 2 'Hashimoto, H.' 3 'Sato, M.' 4 'Iwasaki, H.' 5 'Shimizu, T.' 6 # _citation.id primary _citation.title ;Mechanistic insights into the activation of Rad51-mediated strand exchange from the structure of a recombination activator, the Swi5-Sfr1 complex ; _citation.journal_abbrev Structure _citation.journal_volume 20 _citation.page_first 440 _citation.page_last 449 _citation.year 2012 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22405003 _citation.pdbx_database_id_DOI 10.1016/j.str.2012.01.005 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kuwabara, N.' 1 ? primary 'Murayama, Y.' 2 ? primary 'Hashimoto, H.' 3 ? primary 'Kokabu, Y.' 4 ? primary 'Ikeguchi, M.' 5 ? primary 'Sato, M.' 6 ? primary 'Mayanagi, K.' 7 ? primary 'Tsutsui, Y.' 8 ? primary 'Iwasaki, H.' 9 ? primary 'Shimizu, T.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Mating-type switching protein swi5' 9764.057 4 ? ? ? ? 2 non-polymer man 'octyl beta-D-glucopyranoside' 292.369 2 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'DNA repair protein swi5' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MEKSQLESRVHLLEQQKEQLESSLQDALAKLKNRDAKQTVQKHIDLLHTYNEIRDIALGMIGKVAEHEKCTSVELFDRFG VNGSE ; _entity_poly.pdbx_seq_one_letter_code_can ;MEKSQLESRVHLLEQQKEQLESSLQDALAKLKNRDAKQTVQKHIDLLHTYNEIRDIALGMIGKVAEHEKCTSVELFDRFG VNGSE ; _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'octyl beta-D-glucopyranoside' _pdbx_entity_nonpoly.comp_id BOG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 LYS n 1 4 SER n 1 5 GLN n 1 6 LEU n 1 7 GLU n 1 8 SER n 1 9 ARG n 1 10 VAL n 1 11 HIS n 1 12 LEU n 1 13 LEU n 1 14 GLU n 1 15 GLN n 1 16 GLN n 1 17 LYS n 1 18 GLU n 1 19 GLN n 1 20 LEU n 1 21 GLU n 1 22 SER n 1 23 SER n 1 24 LEU n 1 25 GLN n 1 26 ASP n 1 27 ALA n 1 28 LEU n 1 29 ALA n 1 30 LYS n 1 31 LEU n 1 32 LYS n 1 33 ASN n 1 34 ARG n 1 35 ASP n 1 36 ALA n 1 37 LYS n 1 38 GLN n 1 39 THR n 1 40 VAL n 1 41 GLN n 1 42 LYS n 1 43 HIS n 1 44 ILE n 1 45 ASP n 1 46 LEU n 1 47 LEU n 1 48 HIS n 1 49 THR n 1 50 TYR n 1 51 ASN n 1 52 GLU n 1 53 ILE n 1 54 ARG n 1 55 ASP n 1 56 ILE n 1 57 ALA n 1 58 LEU n 1 59 GLY n 1 60 MET n 1 61 ILE n 1 62 GLY n 1 63 LYS n 1 64 VAL n 1 65 ALA n 1 66 GLU n 1 67 HIS n 1 68 GLU n 1 69 LYS n 1 70 CYS n 1 71 THR n 1 72 SER n 1 73 VAL n 1 74 GLU n 1 75 LEU n 1 76 PHE n 1 77 ASP n 1 78 ARG n 1 79 PHE n 1 80 GLY n 1 81 VAL n 1 82 ASN n 1 83 GLY n 1 84 SER n 1 85 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Fission yeast' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene swi5 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 972h- _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Schizosaccharomyces pombe' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 284812 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BOG D-saccharide n 'octyl beta-D-glucopyranoside' 'Beta-Octylglucoside; octyl beta-D-glucoside; octyl D-glucoside; octyl glucoside' 'C14 H28 O6' 292.369 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _pdbx_chem_comp_identifier.comp_id BOG _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1.0 _pdbx_chem_comp_identifier.identifier b-octylglucoside # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 GLU 2 2 ? ? ? A . n A 1 3 LYS 3 3 ? ? ? A . n A 1 4 SER 4 4 ? ? ? A . n A 1 5 GLN 5 5 ? ? ? A . n A 1 6 LEU 6 6 ? ? ? A . n A 1 7 GLU 7 7 ? ? ? A . n A 1 8 SER 8 8 ? ? ? A . n A 1 9 ARG 9 9 ? ? ? A . n A 1 10 VAL 10 10 ? ? ? A . n A 1 11 HIS 11 11 11 HIS HIS A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 GLN 15 15 15 GLN GLN A . n A 1 16 GLN 16 16 16 GLN GLN A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 GLN 25 25 25 GLN GLN A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 ASN 33 33 33 ASN ASN A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 GLN 38 38 38 GLN GLN A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 HIS 43 43 43 HIS HIS A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 ASP 45 45 45 ASP ASP A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 HIS 48 48 48 HIS HIS A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 TYR 50 50 50 TYR TYR A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 MET 60 60 60 MET MET A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 HIS 67 67 67 HIS HIS A . n A 1 68 GLU 68 68 68 GLU GLU A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 CYS 70 70 70 CYS CYS A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 SER 72 72 72 SER SER A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 ASP 77 77 77 ASP ALA A . n A 1 78 ARG 78 78 78 ARG ARG A . n A 1 79 PHE 79 79 79 PHE PHE A . n A 1 80 GLY 80 80 ? ? ? A . n A 1 81 VAL 81 81 ? ? ? A . n A 1 82 ASN 82 82 ? ? ? A . n A 1 83 GLY 83 83 ? ? ? A . n A 1 84 SER 84 84 ? ? ? A . n A 1 85 GLU 85 85 ? ? ? A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 GLU 2 2 2 GLU ALA B . n B 1 3 LYS 3 3 3 LYS ALA B . n B 1 4 SER 4 4 4 SER SER B . n B 1 5 GLN 5 5 5 GLN GLN B . n B 1 6 LEU 6 6 6 LEU LEU B . n B 1 7 GLU 7 7 7 GLU GLU B . n B 1 8 SER 8 8 8 SER SER B . n B 1 9 ARG 9 9 9 ARG ARG B . n B 1 10 VAL 10 10 10 VAL VAL B . n B 1 11 HIS 11 11 11 HIS HIS B . n B 1 12 LEU 12 12 12 LEU LEU B . n B 1 13 LEU 13 13 13 LEU LEU B . n B 1 14 GLU 14 14 14 GLU GLU B . n B 1 15 GLN 15 15 15 GLN GLN B . n B 1 16 GLN 16 16 16 GLN GLN B . n B 1 17 LYS 17 17 17 LYS LYS B . n B 1 18 GLU 18 18 18 GLU GLU B . n B 1 19 GLN 19 19 19 GLN GLN B . n B 1 20 LEU 20 20 20 LEU LEU B . n B 1 21 GLU 21 21 21 GLU GLU B . n B 1 22 SER 22 22 22 SER SER B . n B 1 23 SER 23 23 23 SER SER B . n B 1 24 LEU 24 24 24 LEU LEU B . n B 1 25 GLN 25 25 25 GLN GLN B . n B 1 26 ASP 26 26 26 ASP ASP B . n B 1 27 ALA 27 27 27 ALA ALA B . n B 1 28 LEU 28 28 28 LEU LEU B . n B 1 29 ALA 29 29 29 ALA ALA B . n B 1 30 LYS 30 30 30 LYS LYS B . n B 1 31 LEU 31 31 31 LEU LEU B . n B 1 32 LYS 32 32 32 LYS LYS B . n B 1 33 ASN 33 33 33 ASN ASN B . n B 1 34 ARG 34 34 34 ARG ARG B . n B 1 35 ASP 35 35 35 ASP ASP B . n B 1 36 ALA 36 36 36 ALA ALA B . n B 1 37 LYS 37 37 37 LYS LYS B . n B 1 38 GLN 38 38 38 GLN GLN B . n B 1 39 THR 39 39 39 THR THR B . n B 1 40 VAL 40 40 40 VAL VAL B . n B 1 41 GLN 41 41 41 GLN GLN B . n B 1 42 LYS 42 42 42 LYS LYS B . n B 1 43 HIS 43 43 43 HIS HIS B . n B 1 44 ILE 44 44 44 ILE ILE B . n B 1 45 ASP 45 45 45 ASP ASP B . n B 1 46 LEU 46 46 46 LEU LEU B . n B 1 47 LEU 47 47 47 LEU LEU B . n B 1 48 HIS 48 48 48 HIS HIS B . n B 1 49 THR 49 49 49 THR THR B . n B 1 50 TYR 50 50 50 TYR TYR B . n B 1 51 ASN 51 51 51 ASN ASN B . n B 1 52 GLU 52 52 52 GLU GLU B . n B 1 53 ILE 53 53 53 ILE ILE B . n B 1 54 ARG 54 54 54 ARG ARG B . n B 1 55 ASP 55 55 55 ASP ASP B . n B 1 56 ILE 56 56 56 ILE ILE B . n B 1 57 ALA 57 57 57 ALA ALA B . n B 1 58 LEU 58 58 58 LEU LEU B . n B 1 59 GLY 59 59 59 GLY GLY B . n B 1 60 MET 60 60 60 MET MET B . n B 1 61 ILE 61 61 61 ILE ILE B . n B 1 62 GLY 62 62 62 GLY GLY B . n B 1 63 LYS 63 63 63 LYS LYS B . n B 1 64 VAL 64 64 64 VAL VAL B . n B 1 65 ALA 65 65 65 ALA ALA B . n B 1 66 GLU 66 66 66 GLU ALA B . n B 1 67 HIS 67 67 67 HIS HIS B . n B 1 68 GLU 68 68 ? ? ? B . n B 1 69 LYS 69 69 ? ? ? B . n B 1 70 CYS 70 70 ? ? ? B . n B 1 71 THR 71 71 ? ? ? B . n B 1 72 SER 72 72 ? ? ? B . n B 1 73 VAL 73 73 ? ? ? B . n B 1 74 GLU 74 74 ? ? ? B . n B 1 75 LEU 75 75 ? ? ? B . n B 1 76 PHE 76 76 ? ? ? B . n B 1 77 ASP 77 77 ? ? ? B . n B 1 78 ARG 78 78 ? ? ? B . n B 1 79 PHE 79 79 ? ? ? B . n B 1 80 GLY 80 80 ? ? ? B . n B 1 81 VAL 81 81 ? ? ? B . n B 1 82 ASN 82 82 ? ? ? B . n B 1 83 GLY 83 83 ? ? ? B . n B 1 84 SER 84 84 ? ? ? B . n B 1 85 GLU 85 85 ? ? ? B . n C 1 1 MET 1 1 ? ? ? C . n C 1 2 GLU 2 2 ? ? ? C . n C 1 3 LYS 3 3 ? ? ? C . n C 1 4 SER 4 4 ? ? ? C . n C 1 5 GLN 5 5 ? ? ? C . n C 1 6 LEU 6 6 ? ? ? C . n C 1 7 GLU 7 7 ? ? ? C . n C 1 8 SER 8 8 ? ? ? C . n C 1 9 ARG 9 9 ? ? ? C . n C 1 10 VAL 10 10 ? ? ? C . n C 1 11 HIS 11 11 ? ? ? C . n C 1 12 LEU 12 12 ? ? ? C . n C 1 13 LEU 13 13 ? ? ? C . n C 1 14 GLU 14 14 14 GLU ALA C . n C 1 15 GLN 15 15 15 GLN ALA C . n C 1 16 GLN 16 16 16 GLN ALA C . n C 1 17 LYS 17 17 17 LYS ALA C . n C 1 18 GLU 18 18 18 GLU ALA C . n C 1 19 GLN 19 19 19 GLN GLN C . n C 1 20 LEU 20 20 20 LEU LEU C . n C 1 21 GLU 21 21 21 GLU GLU C . n C 1 22 SER 22 22 22 SER SER C . n C 1 23 SER 23 23 23 SER SER C . n C 1 24 LEU 24 24 24 LEU LEU C . n C 1 25 GLN 25 25 25 GLN GLN C . n C 1 26 ASP 26 26 26 ASP ASP C . n C 1 27 ALA 27 27 27 ALA ALA C . n C 1 28 LEU 28 28 28 LEU LEU C . n C 1 29 ALA 29 29 29 ALA ALA C . n C 1 30 LYS 30 30 30 LYS LYS C . n C 1 31 LEU 31 31 31 LEU LEU C . n C 1 32 LYS 32 32 32 LYS LYS C . n C 1 33 ASN 33 33 33 ASN ASN C . n C 1 34 ARG 34 34 34 ARG ARG C . n C 1 35 ASP 35 35 35 ASP ASP C . n C 1 36 ALA 36 36 36 ALA ALA C . n C 1 37 LYS 37 37 37 LYS LYS C . n C 1 38 GLN 38 38 38 GLN GLN C . n C 1 39 THR 39 39 39 THR THR C . n C 1 40 VAL 40 40 40 VAL VAL C . n C 1 41 GLN 41 41 41 GLN GLN C . n C 1 42 LYS 42 42 42 LYS LYS C . n C 1 43 HIS 43 43 43 HIS HIS C . n C 1 44 ILE 44 44 44 ILE ILE C . n C 1 45 ASP 45 45 45 ASP ASP C . n C 1 46 LEU 46 46 46 LEU LEU C . n C 1 47 LEU 47 47 47 LEU LEU C . n C 1 48 HIS 48 48 48 HIS HIS C . n C 1 49 THR 49 49 49 THR THR C . n C 1 50 TYR 50 50 50 TYR TYR C . n C 1 51 ASN 51 51 51 ASN ASN C . n C 1 52 GLU 52 52 52 GLU GLU C . n C 1 53 ILE 53 53 53 ILE ILE C . n C 1 54 ARG 54 54 54 ARG ARG C . n C 1 55 ASP 55 55 55 ASP ASP C . n C 1 56 ILE 56 56 56 ILE ILE C . n C 1 57 ALA 57 57 57 ALA ALA C . n C 1 58 LEU 58 58 58 LEU LEU C . n C 1 59 GLY 59 59 59 GLY GLY C . n C 1 60 MET 60 60 60 MET MET C . n C 1 61 ILE 61 61 61 ILE ILE C . n C 1 62 GLY 62 62 62 GLY GLY C . n C 1 63 LYS 63 63 63 LYS LYS C . n C 1 64 VAL 64 64 64 VAL VAL C . n C 1 65 ALA 65 65 65 ALA ALA C . n C 1 66 GLU 66 66 66 GLU ALA C . n C 1 67 HIS 67 67 ? ? ? C . n C 1 68 GLU 68 68 ? ? ? C . n C 1 69 LYS 69 69 ? ? ? C . n C 1 70 CYS 70 70 ? ? ? C . n C 1 71 THR 71 71 ? ? ? C . n C 1 72 SER 72 72 ? ? ? C . n C 1 73 VAL 73 73 ? ? ? C . n C 1 74 GLU 74 74 ? ? ? C . n C 1 75 LEU 75 75 ? ? ? C . n C 1 76 PHE 76 76 ? ? ? C . n C 1 77 ASP 77 77 ? ? ? C . n C 1 78 ARG 78 78 ? ? ? C . n C 1 79 PHE 79 79 ? ? ? C . n C 1 80 GLY 80 80 ? ? ? C . n C 1 81 VAL 81 81 ? ? ? C . n C 1 82 ASN 82 82 ? ? ? C . n C 1 83 GLY 83 83 ? ? ? C . n C 1 84 SER 84 84 ? ? ? C . n C 1 85 GLU 85 85 ? ? ? C . n D 1 1 MET 1 1 ? ? ? D . n D 1 2 GLU 2 2 ? ? ? D . n D 1 3 LYS 3 3 ? ? ? D . n D 1 4 SER 4 4 ? ? ? D . n D 1 5 GLN 5 5 ? ? ? D . n D 1 6 LEU 6 6 ? ? ? D . n D 1 7 GLU 7 7 ? ? ? D . n D 1 8 SER 8 8 ? ? ? D . n D 1 9 ARG 9 9 ? ? ? D . n D 1 10 VAL 10 10 10 VAL ALA D . n D 1 11 HIS 11 11 11 HIS HIS D . n D 1 12 LEU 12 12 12 LEU ALA D . n D 1 13 LEU 13 13 13 LEU ALA D . n D 1 14 GLU 14 14 14 GLU ALA D . n D 1 15 GLN 15 15 15 GLN ALA D . n D 1 16 GLN 16 16 16 GLN ALA D . n D 1 17 LYS 17 17 17 LYS LYS D . n D 1 18 GLU 18 18 18 GLU ALA D . n D 1 19 GLN 19 19 19 GLN GLN D . n D 1 20 LEU 20 20 20 LEU LEU D . n D 1 21 GLU 21 21 21 GLU GLU D . n D 1 22 SER 22 22 22 SER SER D . n D 1 23 SER 23 23 23 SER SER D . n D 1 24 LEU 24 24 24 LEU LEU D . n D 1 25 GLN 25 25 25 GLN GLN D . n D 1 26 ASP 26 26 26 ASP ASP D . n D 1 27 ALA 27 27 27 ALA ALA D . n D 1 28 LEU 28 28 28 LEU LEU D . n D 1 29 ALA 29 29 29 ALA ALA D . n D 1 30 LYS 30 30 30 LYS LYS D . n D 1 31 LEU 31 31 31 LEU LEU D . n D 1 32 LYS 32 32 32 LYS LYS D . n D 1 33 ASN 33 33 33 ASN ASN D . n D 1 34 ARG 34 34 34 ARG ARG D . n D 1 35 ASP 35 35 35 ASP ASP D . n D 1 36 ALA 36 36 36 ALA ALA D . n D 1 37 LYS 37 37 37 LYS LYS D . n D 1 38 GLN 38 38 38 GLN GLN D . n D 1 39 THR 39 39 39 THR THR D . n D 1 40 VAL 40 40 40 VAL VAL D . n D 1 41 GLN 41 41 41 GLN GLN D . n D 1 42 LYS 42 42 42 LYS LYS D . n D 1 43 HIS 43 43 43 HIS HIS D . n D 1 44 ILE 44 44 44 ILE ILE D . n D 1 45 ASP 45 45 45 ASP ASP D . n D 1 46 LEU 46 46 46 LEU LEU D . n D 1 47 LEU 47 47 47 LEU LEU D . n D 1 48 HIS 48 48 48 HIS HIS D . n D 1 49 THR 49 49 49 THR THR D . n D 1 50 TYR 50 50 50 TYR TYR D . n D 1 51 ASN 51 51 51 ASN ASN D . n D 1 52 GLU 52 52 52 GLU GLU D . n D 1 53 ILE 53 53 53 ILE ILE D . n D 1 54 ARG 54 54 54 ARG ARG D . n D 1 55 ASP 55 55 55 ASP ASP D . n D 1 56 ILE 56 56 56 ILE ILE D . n D 1 57 ALA 57 57 57 ALA ALA D . n D 1 58 LEU 58 58 58 LEU LEU D . n D 1 59 GLY 59 59 59 GLY GLY D . n D 1 60 MET 60 60 60 MET MET D . n D 1 61 ILE 61 61 61 ILE ILE D . n D 1 62 GLY 62 62 62 GLY GLY D . n D 1 63 LYS 63 63 63 LYS LYS D . n D 1 64 VAL 64 64 64 VAL VAL D . n D 1 65 ALA 65 65 65 ALA ALA D . n D 1 66 GLU 66 66 66 GLU GLU D . n D 1 67 HIS 67 67 67 HIS HIS D . n D 1 68 GLU 68 68 68 GLU ALA D . n D 1 69 LYS 69 69 69 LYS ALA D . n D 1 70 CYS 70 70 70 CYS CYS D . n D 1 71 THR 71 71 71 THR ALA D . n D 1 72 SER 72 72 72 SER ALA D . n D 1 73 VAL 73 73 ? ? ? D . n D 1 74 GLU 74 74 ? ? ? D . n D 1 75 LEU 75 75 ? ? ? D . n D 1 76 PHE 76 76 ? ? ? D . n D 1 77 ASP 77 77 ? ? ? D . n D 1 78 ARG 78 78 ? ? ? D . n D 1 79 PHE 79 79 ? ? ? D . n D 1 80 GLY 80 80 ? ? ? D . n D 1 81 VAL 81 81 ? ? ? D . n D 1 82 ASN 82 82 ? ? ? D . n D 1 83 GLY 83 83 ? ? ? D . n D 1 84 SER 84 84 ? ? ? D . n D 1 85 GLU 85 85 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 BOG 1 86 2 BOG BOG B . F 2 BOG 1 86 1 BOG BOG C . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 77 ? CG ? A ASP 77 CG 2 1 Y 1 A ASP 77 ? OD1 ? A ASP 77 OD1 3 1 Y 1 A ASP 77 ? OD2 ? A ASP 77 OD2 4 1 Y 1 B GLU 2 ? CG ? B GLU 2 CG 5 1 Y 1 B GLU 2 ? CD ? B GLU 2 CD 6 1 Y 1 B GLU 2 ? OE1 ? B GLU 2 OE1 7 1 Y 1 B GLU 2 ? OE2 ? B GLU 2 OE2 8 1 Y 1 B LYS 3 ? CG ? B LYS 3 CG 9 1 Y 1 B LYS 3 ? CD ? B LYS 3 CD 10 1 Y 1 B LYS 3 ? CE ? B LYS 3 CE 11 1 Y 1 B LYS 3 ? NZ ? B LYS 3 NZ 12 1 Y 1 B GLU 66 ? CG ? B GLU 66 CG 13 1 Y 1 B GLU 66 ? CD ? B GLU 66 CD 14 1 Y 1 B GLU 66 ? OE1 ? B GLU 66 OE1 15 1 Y 1 B GLU 66 ? OE2 ? B GLU 66 OE2 16 1 Y 1 C GLU 14 ? CG ? C GLU 14 CG 17 1 Y 1 C GLU 14 ? CD ? C GLU 14 CD 18 1 Y 1 C GLU 14 ? OE1 ? C GLU 14 OE1 19 1 Y 1 C GLU 14 ? OE2 ? C GLU 14 OE2 20 1 Y 1 C GLN 15 ? CG ? C GLN 15 CG 21 1 Y 1 C GLN 15 ? CD ? C GLN 15 CD 22 1 Y 1 C GLN 15 ? OE1 ? C GLN 15 OE1 23 1 Y 1 C GLN 15 ? NE2 ? C GLN 15 NE2 24 1 Y 1 C GLN 16 ? CG ? C GLN 16 CG 25 1 Y 1 C GLN 16 ? CD ? C GLN 16 CD 26 1 Y 1 C GLN 16 ? OE1 ? C GLN 16 OE1 27 1 Y 1 C GLN 16 ? NE2 ? C GLN 16 NE2 28 1 Y 1 C LYS 17 ? CG ? C LYS 17 CG 29 1 Y 1 C LYS 17 ? CD ? C LYS 17 CD 30 1 Y 1 C LYS 17 ? CE ? C LYS 17 CE 31 1 Y 1 C LYS 17 ? NZ ? C LYS 17 NZ 32 1 Y 1 C GLU 18 ? CG ? C GLU 18 CG 33 1 Y 1 C GLU 18 ? CD ? C GLU 18 CD 34 1 Y 1 C GLU 18 ? OE1 ? C GLU 18 OE1 35 1 Y 1 C GLU 18 ? OE2 ? C GLU 18 OE2 36 1 Y 1 C GLU 66 ? CG ? C GLU 66 CG 37 1 Y 1 C GLU 66 ? CD ? C GLU 66 CD 38 1 Y 1 C GLU 66 ? OE1 ? C GLU 66 OE1 39 1 Y 1 C GLU 66 ? OE2 ? C GLU 66 OE2 40 1 Y 1 D VAL 10 ? CG1 ? D VAL 10 CG1 41 1 Y 1 D VAL 10 ? CG2 ? D VAL 10 CG2 42 1 Y 1 D LEU 12 ? CG ? D LEU 12 CG 43 1 Y 1 D LEU 12 ? CD1 ? D LEU 12 CD1 44 1 Y 1 D LEU 12 ? CD2 ? D LEU 12 CD2 45 1 Y 1 D LEU 13 ? CG ? D LEU 13 CG 46 1 Y 1 D LEU 13 ? CD1 ? D LEU 13 CD1 47 1 Y 1 D LEU 13 ? CD2 ? D LEU 13 CD2 48 1 Y 1 D GLU 14 ? CG ? D GLU 14 CG 49 1 Y 1 D GLU 14 ? CD ? D GLU 14 CD 50 1 Y 1 D GLU 14 ? OE1 ? D GLU 14 OE1 51 1 Y 1 D GLU 14 ? OE2 ? D GLU 14 OE2 52 1 Y 1 D GLN 15 ? CG ? D GLN 15 CG 53 1 Y 1 D GLN 15 ? CD ? D GLN 15 CD 54 1 Y 1 D GLN 15 ? OE1 ? D GLN 15 OE1 55 1 Y 1 D GLN 15 ? NE2 ? D GLN 15 NE2 56 1 Y 1 D GLN 16 ? CG ? D GLN 16 CG 57 1 Y 1 D GLN 16 ? CD ? D GLN 16 CD 58 1 Y 1 D GLN 16 ? OE1 ? D GLN 16 OE1 59 1 Y 1 D GLN 16 ? NE2 ? D GLN 16 NE2 60 1 Y 1 D GLU 18 ? CG ? D GLU 18 CG 61 1 Y 1 D GLU 18 ? CD ? D GLU 18 CD 62 1 Y 1 D GLU 18 ? OE1 ? D GLU 18 OE1 63 1 Y 1 D GLU 18 ? OE2 ? D GLU 18 OE2 64 1 Y 1 D GLU 68 ? CG ? D GLU 68 CG 65 1 Y 1 D GLU 68 ? CD ? D GLU 68 CD 66 1 Y 1 D GLU 68 ? OE1 ? D GLU 68 OE1 67 1 Y 1 D GLU 68 ? OE2 ? D GLU 68 OE2 68 1 Y 1 D LYS 69 ? CG ? D LYS 69 CG 69 1 Y 1 D LYS 69 ? CD ? D LYS 69 CD 70 1 Y 1 D LYS 69 ? CE ? D LYS 69 CE 71 1 Y 1 D LYS 69 ? NZ ? D LYS 69 NZ 72 1 Y 1 D THR 71 ? OG1 ? D THR 71 OG1 73 1 Y 1 D THR 71 ? CG2 ? D THR 71 CG2 74 1 Y 1 D SER 72 ? OG ? D SER 72 OG # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language ADSC 'data collection' Quantum ? 1 ? ? ? ? SOLVE phasing . ? 2 ? ? ? ? REFMAC refinement 5.6.0113 ? 3 ? ? ? ? HKL-2000 'data reduction' . ? 4 ? ? ? ? SCALEPACK 'data scaling' . ? 5 ? ? ? ? # _cell.entry_id 3VIR _cell.length_a 177.240 _cell.length_b 57.899 _cell.length_c 64.432 _cell.angle_alpha 90.00 _cell.angle_beta 96.73 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3VIR _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3VIR _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.20 _exptl_crystal.density_percent_sol 70.74 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_details '20% MPD, 0.1M Tris-HCl, 24.5mM octyl-b-glucoside, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210r' _diffrn_detector.pdbx_collection_date 2005-10-20 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE AR-NW12A' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline AR-NW12A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.entry_id 3VIR _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.7 _reflns.number_obs 15572 _reflns.number_all 18023 _reflns.percent_possible_obs 86.4 _reflns.pdbx_Rmerge_I_obs 0.058 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.4 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.7 _reflns_shell.d_res_low 2.8 _reflns_shell.percent_possible_all 62.1 _reflns_shell.Rmerge_I_obs 0.263 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.5 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3VIR _refine.ls_number_reflns_obs 14795 _refine.ls_number_reflns_all 17174 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.65 _refine.ls_d_res_high 2.70 _refine.ls_percent_reflns_obs 86.15 _refine.ls_R_factor_obs 0.25378 _refine.ls_R_factor_all 0.25378 _refine.ls_R_factor_R_work 0.25087 _refine.ls_R_factor_R_free 0.31060 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 776 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.918 _refine.correlation_coeff_Fo_to_Fc_free 0.875 _refine.B_iso_mean 65.085 _refine.aniso_B[1][1] -2.43 _refine.aniso_B[2][2] 3.11 _refine.aniso_B[3][3] -0.78 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.43 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.329 _refine.overall_SU_ML 0.240 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 25.977 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1950 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 40 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1990 _refine_hist.d_res_high 2.70 _refine_hist.d_res_low 19.65 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.018 0.021 ? 2006 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.003 0.020 ? 1355 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.754 1.976 ? 2687 ? 'X-RAY DIFFRACTION' r_angle_other_deg 1.020 3.000 ? 3353 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.147 5.000 ? 247 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 40.203 25.652 ? 92 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 22.583 15.000 ? 390 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 20.155 15.000 ? 10 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.088 0.200 ? 322 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.005 0.020 ? 2157 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.001 0.020 ? 341 ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.700 _refine_ls_shell.d_res_low 2.769 _refine_ls_shell.number_reflns_R_work 692 _refine_ls_shell.R_factor_R_work 0.357 _refine_ls_shell.percent_reflns_obs 58.10 _refine_ls_shell.R_factor_R_free 0.526 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 36 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # _database_PDB_matrix.entry_id 3VIR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3VIR _struct.title 'Crystal strcture of Swi5 from fission yeast' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3VIR _struct_keywords.pdbx_keywords 'RECOMBINATION ACTIVATOR' _struct_keywords.text 'Sfr1, RECOMBINATION ACTIVATOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SWI5_SCHPO _struct_ref.pdbx_db_accession Q9UUB7 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MEKSQLESRVHLLEQQKEQLESSLQDALAKLKNRDAKQTVQKHIDLLHTYNEIRDIALGMIGKVAEHEKCTSVELFDRFG VNGSE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3VIR A 1 ? 85 ? Q9UUB7 1 ? 85 ? 1 85 2 1 3VIR B 1 ? 85 ? Q9UUB7 1 ? 85 ? 1 85 3 1 3VIR C 1 ? 85 ? Q9UUB7 1 ? 85 ? 1 85 4 1 3VIR D 1 ? 85 ? Q9UUB7 1 ? 85 ? 1 85 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6950 ? 1 MORE -38 ? 1 'SSA (A^2)' 18580 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 12 ? PHE A 79 ? LEU A 12 PHE A 79 1 ? 68 HELX_P HELX_P2 2 LYS B 3 ? HIS B 67 ? LYS B 3 HIS B 67 1 ? 65 HELX_P HELX_P3 3 GLN C 15 ? GLU C 66 ? GLN C 15 GLU C 66 1 ? 52 HELX_P HELX_P4 4 HIS D 11 ? LYS D 69 ? HIS D 11 LYS D 69 1 ? 59 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OH _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 TYR _pdbx_validate_symm_contact.auth_seq_id_1 50 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 OE2 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 GLU _pdbx_validate_symm_contact.auth_seq_id_2 68 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_556 _pdbx_validate_symm_contact.dist 2.16 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 12 ? ? -65.76 21.51 2 1 ARG A 78 ? ? -73.45 -98.23 3 1 VAL C 64 ? ? -108.57 -65.59 4 1 CYS D 70 ? ? -166.03 38.65 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 15.2888 15.4505 20.3677 0.1024 0.4962 0.0759 0.0499 -0.0500 -0.0322 19.6361 1.4669 3.2109 -4.1522 -7.6367 1.4857 0.2341 -0.3973 0.0296 0.0945 -0.1508 -0.0923 -0.1492 0.2386 -0.0833 'X-RAY DIFFRACTION' 2 ? refined 12.0368 17.7509 9.6290 0.0632 0.4594 0.1601 0.0636 0.0241 0.0194 27.3928 2.8736 3.6244 -7.7860 -8.9481 2.7254 0.8339 0.1116 0.2216 -0.3292 -0.4408 -0.1291 -0.3444 -0.0193 -0.3931 'X-RAY DIFFRACTION' 3 ? refined 59.0438 -8.0826 17.5512 0.0294 0.5279 0.0386 0.0368 0.0091 0.0008 9.0980 1.6137 1.0022 -1.3209 2.6088 -0.1447 -0.1742 -0.1614 0.0087 0.1690 0.1636 0.1982 -0.0091 -0.1074 0.0106 'X-RAY DIFFRACTION' 4 ? refined 64.9133 -9.9262 7.2958 0.0787 0.5229 0.0890 0.0727 -0.0602 -0.0139 15.9811 2.9402 1.6215 -5.6340 5.0034 -1.7001 0.2626 0.3321 0.1298 -0.2476 -0.2276 -0.0580 0.1256 0.1484 -0.0351 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 11 ? ? A 79 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 2 ? ? B 67 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 C 14 ? ? C 66 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 D 10 ? ? D 72 ? ? ? ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A GLU 2 ? A GLU 2 3 1 Y 1 A LYS 3 ? A LYS 3 4 1 Y 1 A SER 4 ? A SER 4 5 1 Y 1 A GLN 5 ? A GLN 5 6 1 Y 1 A LEU 6 ? A LEU 6 7 1 Y 1 A GLU 7 ? A GLU 7 8 1 Y 1 A SER 8 ? A SER 8 9 1 Y 1 A ARG 9 ? A ARG 9 10 1 Y 1 A VAL 10 ? A VAL 10 11 1 Y 1 A GLY 80 ? A GLY 80 12 1 Y 1 A VAL 81 ? A VAL 81 13 1 Y 1 A ASN 82 ? A ASN 82 14 1 Y 1 A GLY 83 ? A GLY 83 15 1 Y 1 A SER 84 ? A SER 84 16 1 Y 1 A GLU 85 ? A GLU 85 17 1 Y 1 B MET 1 ? B MET 1 18 1 Y 1 B GLU 68 ? B GLU 68 19 1 Y 1 B LYS 69 ? B LYS 69 20 1 Y 1 B CYS 70 ? B CYS 70 21 1 Y 1 B THR 71 ? B THR 71 22 1 Y 1 B SER 72 ? B SER 72 23 1 Y 1 B VAL 73 ? B VAL 73 24 1 Y 1 B GLU 74 ? B GLU 74 25 1 Y 1 B LEU 75 ? B LEU 75 26 1 Y 1 B PHE 76 ? B PHE 76 27 1 Y 1 B ASP 77 ? B ASP 77 28 1 Y 1 B ARG 78 ? B ARG 78 29 1 Y 1 B PHE 79 ? B PHE 79 30 1 Y 1 B GLY 80 ? B GLY 80 31 1 Y 1 B VAL 81 ? B VAL 81 32 1 Y 1 B ASN 82 ? B ASN 82 33 1 Y 1 B GLY 83 ? B GLY 83 34 1 Y 1 B SER 84 ? B SER 84 35 1 Y 1 B GLU 85 ? B GLU 85 36 1 Y 1 C MET 1 ? C MET 1 37 1 Y 1 C GLU 2 ? C GLU 2 38 1 Y 1 C LYS 3 ? C LYS 3 39 1 Y 1 C SER 4 ? C SER 4 40 1 Y 1 C GLN 5 ? C GLN 5 41 1 Y 1 C LEU 6 ? C LEU 6 42 1 Y 1 C GLU 7 ? C GLU 7 43 1 Y 1 C SER 8 ? C SER 8 44 1 Y 1 C ARG 9 ? C ARG 9 45 1 Y 1 C VAL 10 ? C VAL 10 46 1 Y 1 C HIS 11 ? C HIS 11 47 1 Y 1 C LEU 12 ? C LEU 12 48 1 Y 1 C LEU 13 ? C LEU 13 49 1 Y 1 C HIS 67 ? C HIS 67 50 1 Y 1 C GLU 68 ? C GLU 68 51 1 Y 1 C LYS 69 ? C LYS 69 52 1 Y 1 C CYS 70 ? C CYS 70 53 1 Y 1 C THR 71 ? C THR 71 54 1 Y 1 C SER 72 ? C SER 72 55 1 Y 1 C VAL 73 ? C VAL 73 56 1 Y 1 C GLU 74 ? C GLU 74 57 1 Y 1 C LEU 75 ? C LEU 75 58 1 Y 1 C PHE 76 ? C PHE 76 59 1 Y 1 C ASP 77 ? C ASP 77 60 1 Y 1 C ARG 78 ? C ARG 78 61 1 Y 1 C PHE 79 ? C PHE 79 62 1 Y 1 C GLY 80 ? C GLY 80 63 1 Y 1 C VAL 81 ? C VAL 81 64 1 Y 1 C ASN 82 ? C ASN 82 65 1 Y 1 C GLY 83 ? C GLY 83 66 1 Y 1 C SER 84 ? C SER 84 67 1 Y 1 C GLU 85 ? C GLU 85 68 1 Y 1 D MET 1 ? D MET 1 69 1 Y 1 D GLU 2 ? D GLU 2 70 1 Y 1 D LYS 3 ? D LYS 3 71 1 Y 1 D SER 4 ? D SER 4 72 1 Y 1 D GLN 5 ? D GLN 5 73 1 Y 1 D LEU 6 ? D LEU 6 74 1 Y 1 D GLU 7 ? D GLU 7 75 1 Y 1 D SER 8 ? D SER 8 76 1 Y 1 D ARG 9 ? D ARG 9 77 1 Y 1 D VAL 73 ? D VAL 73 78 1 Y 1 D GLU 74 ? D GLU 74 79 1 Y 1 D LEU 75 ? D LEU 75 80 1 Y 1 D PHE 76 ? D PHE 76 81 1 Y 1 D ASP 77 ? D ASP 77 82 1 Y 1 D ARG 78 ? D ARG 78 83 1 Y 1 D PHE 79 ? D PHE 79 84 1 Y 1 D GLY 80 ? D GLY 80 85 1 Y 1 D VAL 81 ? D VAL 81 86 1 Y 1 D ASN 82 ? D ASN 82 87 1 Y 1 D GLY 83 ? D GLY 83 88 1 Y 1 D SER 84 ? D SER 84 89 1 Y 1 D GLU 85 ? D GLU 85 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BOG C1 C N R 74 BOG O1 O N N 75 BOG C2 C N R 76 BOG O2 O N N 77 BOG C3 C N S 78 BOG O3 O N N 79 BOG C4 C N S 80 BOG O4 O N N 81 BOG C5 C N R 82 BOG O5 O N N 83 BOG C6 C N N 84 BOG O6 O N N 85 BOG "C1'" C N N 86 BOG "C2'" C N N 87 BOG "C3'" C N N 88 BOG "C4'" C N N 89 BOG "C5'" C N N 90 BOG "C6'" C N N 91 BOG "C7'" C N N 92 BOG "C8'" C N N 93 BOG H1 H N N 94 BOG H2 H N N 95 BOG HO2 H N N 96 BOG H3 H N N 97 BOG HO3 H N N 98 BOG H4 H N N 99 BOG HO4 H N N 100 BOG H5 H N N 101 BOG H61 H N N 102 BOG H62 H N N 103 BOG HO6 H N N 104 BOG "H1'1" H N N 105 BOG "H1'2" H N N 106 BOG "H2'1" H N N 107 BOG "H2'2" H N N 108 BOG "H3'1" H N N 109 BOG "H3'2" H N N 110 BOG "H4'1" H N N 111 BOG "H4'2" H N N 112 BOG "H5'1" H N N 113 BOG "H5'2" H N N 114 BOG "H6'1" H N N 115 BOG "H6'2" H N N 116 BOG "H7'1" H N N 117 BOG "H7'2" H N N 118 BOG "H8'1" H N N 119 BOG "H8'2" H N N 120 BOG "H8'3" H N N 121 CYS N N N N 122 CYS CA C N R 123 CYS C C N N 124 CYS O O N N 125 CYS CB C N N 126 CYS SG S N N 127 CYS OXT O N N 128 CYS H H N N 129 CYS H2 H N N 130 CYS HA H N N 131 CYS HB2 H N N 132 CYS HB3 H N N 133 CYS HG H N N 134 CYS HXT H N N 135 GLN N N N N 136 GLN CA C N S 137 GLN C C N N 138 GLN O O N N 139 GLN CB C N N 140 GLN CG C N N 141 GLN CD C N N 142 GLN OE1 O N N 143 GLN NE2 N N N 144 GLN OXT O N N 145 GLN H H N N 146 GLN H2 H N N 147 GLN HA H N N 148 GLN HB2 H N N 149 GLN HB3 H N N 150 GLN HG2 H N N 151 GLN HG3 H N N 152 GLN HE21 H N N 153 GLN HE22 H N N 154 GLN HXT H N N 155 GLU N N N N 156 GLU CA C N S 157 GLU C C N N 158 GLU O O N N 159 GLU CB C N N 160 GLU CG C N N 161 GLU CD C N N 162 GLU OE1 O N N 163 GLU OE2 O N N 164 GLU OXT O N N 165 GLU H H N N 166 GLU H2 H N N 167 GLU HA H N N 168 GLU HB2 H N N 169 GLU HB3 H N N 170 GLU HG2 H N N 171 GLU HG3 H N N 172 GLU HE2 H N N 173 GLU HXT H N N 174 GLY N N N N 175 GLY CA C N N 176 GLY C C N N 177 GLY O O N N 178 GLY OXT O N N 179 GLY H H N N 180 GLY H2 H N N 181 GLY HA2 H N N 182 GLY HA3 H N N 183 GLY HXT H N N 184 HIS N N N N 185 HIS CA C N S 186 HIS C C N N 187 HIS O O N N 188 HIS CB C N N 189 HIS CG C Y N 190 HIS ND1 N Y N 191 HIS CD2 C Y N 192 HIS CE1 C Y N 193 HIS NE2 N Y N 194 HIS OXT O N N 195 HIS H H N N 196 HIS H2 H N N 197 HIS HA H N N 198 HIS HB2 H N N 199 HIS HB3 H N N 200 HIS HD1 H N N 201 HIS HD2 H N N 202 HIS HE1 H N N 203 HIS HE2 H N N 204 HIS HXT H N N 205 ILE N N N N 206 ILE CA C N S 207 ILE C C N N 208 ILE O O N N 209 ILE CB C N S 210 ILE CG1 C N N 211 ILE CG2 C N N 212 ILE CD1 C N N 213 ILE OXT O N N 214 ILE H H N N 215 ILE H2 H N N 216 ILE HA H N N 217 ILE HB H N N 218 ILE HG12 H N N 219 ILE HG13 H N N 220 ILE HG21 H N N 221 ILE HG22 H N N 222 ILE HG23 H N N 223 ILE HD11 H N N 224 ILE HD12 H N N 225 ILE HD13 H N N 226 ILE HXT H N N 227 LEU N N N N 228 LEU CA C N S 229 LEU C C N N 230 LEU O O N N 231 LEU CB C N N 232 LEU CG C N N 233 LEU CD1 C N N 234 LEU CD2 C N N 235 LEU OXT O N N 236 LEU H H N N 237 LEU H2 H N N 238 LEU HA H N N 239 LEU HB2 H N N 240 LEU HB3 H N N 241 LEU HG H N N 242 LEU HD11 H N N 243 LEU HD12 H N N 244 LEU HD13 H N N 245 LEU HD21 H N N 246 LEU HD22 H N N 247 LEU HD23 H N N 248 LEU HXT H N N 249 LYS N N N N 250 LYS CA C N S 251 LYS C C N N 252 LYS O O N N 253 LYS CB C N N 254 LYS CG C N N 255 LYS CD C N N 256 LYS CE C N N 257 LYS NZ N N N 258 LYS OXT O N N 259 LYS H H N N 260 LYS H2 H N N 261 LYS HA H N N 262 LYS HB2 H N N 263 LYS HB3 H N N 264 LYS HG2 H N N 265 LYS HG3 H N N 266 LYS HD2 H N N 267 LYS HD3 H N N 268 LYS HE2 H N N 269 LYS HE3 H N N 270 LYS HZ1 H N N 271 LYS HZ2 H N N 272 LYS HZ3 H N N 273 LYS HXT H N N 274 MET N N N N 275 MET CA C N S 276 MET C C N N 277 MET O O N N 278 MET CB C N N 279 MET CG C N N 280 MET SD S N N 281 MET CE C N N 282 MET OXT O N N 283 MET H H N N 284 MET H2 H N N 285 MET HA H N N 286 MET HB2 H N N 287 MET HB3 H N N 288 MET HG2 H N N 289 MET HG3 H N N 290 MET HE1 H N N 291 MET HE2 H N N 292 MET HE3 H N N 293 MET HXT H N N 294 PHE N N N N 295 PHE CA C N S 296 PHE C C N N 297 PHE O O N N 298 PHE CB C N N 299 PHE CG C Y N 300 PHE CD1 C Y N 301 PHE CD2 C Y N 302 PHE CE1 C Y N 303 PHE CE2 C Y N 304 PHE CZ C Y N 305 PHE OXT O N N 306 PHE H H N N 307 PHE H2 H N N 308 PHE HA H N N 309 PHE HB2 H N N 310 PHE HB3 H N N 311 PHE HD1 H N N 312 PHE HD2 H N N 313 PHE HE1 H N N 314 PHE HE2 H N N 315 PHE HZ H N N 316 PHE HXT H N N 317 SER N N N N 318 SER CA C N S 319 SER C C N N 320 SER O O N N 321 SER CB C N N 322 SER OG O N N 323 SER OXT O N N 324 SER H H N N 325 SER H2 H N N 326 SER HA H N N 327 SER HB2 H N N 328 SER HB3 H N N 329 SER HG H N N 330 SER HXT H N N 331 THR N N N N 332 THR CA C N S 333 THR C C N N 334 THR O O N N 335 THR CB C N R 336 THR OG1 O N N 337 THR CG2 C N N 338 THR OXT O N N 339 THR H H N N 340 THR H2 H N N 341 THR HA H N N 342 THR HB H N N 343 THR HG1 H N N 344 THR HG21 H N N 345 THR HG22 H N N 346 THR HG23 H N N 347 THR HXT H N N 348 TYR N N N N 349 TYR CA C N S 350 TYR C C N N 351 TYR O O N N 352 TYR CB C N N 353 TYR CG C Y N 354 TYR CD1 C Y N 355 TYR CD2 C Y N 356 TYR CE1 C Y N 357 TYR CE2 C Y N 358 TYR CZ C Y N 359 TYR OH O N N 360 TYR OXT O N N 361 TYR H H N N 362 TYR H2 H N N 363 TYR HA H N N 364 TYR HB2 H N N 365 TYR HB3 H N N 366 TYR HD1 H N N 367 TYR HD2 H N N 368 TYR HE1 H N N 369 TYR HE2 H N N 370 TYR HH H N N 371 TYR HXT H N N 372 VAL N N N N 373 VAL CA C N S 374 VAL C C N N 375 VAL O O N N 376 VAL CB C N N 377 VAL CG1 C N N 378 VAL CG2 C N N 379 VAL OXT O N N 380 VAL H H N N 381 VAL H2 H N N 382 VAL HA H N N 383 VAL HB H N N 384 VAL HG11 H N N 385 VAL HG12 H N N 386 VAL HG13 H N N 387 VAL HG21 H N N 388 VAL HG22 H N N 389 VAL HG23 H N N 390 VAL HXT H N N 391 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BOG C1 O1 sing N N 70 BOG C1 C2 sing N N 71 BOG C1 O5 sing N N 72 BOG C1 H1 sing N N 73 BOG O1 "C1'" sing N N 74 BOG C2 O2 sing N N 75 BOG C2 C3 sing N N 76 BOG C2 H2 sing N N 77 BOG O2 HO2 sing N N 78 BOG C3 O3 sing N N 79 BOG C3 C4 sing N N 80 BOG C3 H3 sing N N 81 BOG O3 HO3 sing N N 82 BOG C4 O4 sing N N 83 BOG C4 C5 sing N N 84 BOG C4 H4 sing N N 85 BOG O4 HO4 sing N N 86 BOG C5 O5 sing N N 87 BOG C5 C6 sing N N 88 BOG C5 H5 sing N N 89 BOG C6 O6 sing N N 90 BOG C6 H61 sing N N 91 BOG C6 H62 sing N N 92 BOG O6 HO6 sing N N 93 BOG "C1'" "C2'" sing N N 94 BOG "C1'" "H1'1" sing N N 95 BOG "C1'" "H1'2" sing N N 96 BOG "C2'" "C3'" sing N N 97 BOG "C2'" "H2'1" sing N N 98 BOG "C2'" "H2'2" sing N N 99 BOG "C3'" "C4'" sing N N 100 BOG "C3'" "H3'1" sing N N 101 BOG "C3'" "H3'2" sing N N 102 BOG "C4'" "C5'" sing N N 103 BOG "C4'" "H4'1" sing N N 104 BOG "C4'" "H4'2" sing N N 105 BOG "C5'" "C6'" sing N N 106 BOG "C5'" "H5'1" sing N N 107 BOG "C5'" "H5'2" sing N N 108 BOG "C6'" "C7'" sing N N 109 BOG "C6'" "H6'1" sing N N 110 BOG "C6'" "H6'2" sing N N 111 BOG "C7'" "C8'" sing N N 112 BOG "C7'" "H7'1" sing N N 113 BOG "C7'" "H7'2" sing N N 114 BOG "C8'" "H8'1" sing N N 115 BOG "C8'" "H8'2" sing N N 116 BOG "C8'" "H8'3" sing N N 117 CYS N CA sing N N 118 CYS N H sing N N 119 CYS N H2 sing N N 120 CYS CA C sing N N 121 CYS CA CB sing N N 122 CYS CA HA sing N N 123 CYS C O doub N N 124 CYS C OXT sing N N 125 CYS CB SG sing N N 126 CYS CB HB2 sing N N 127 CYS CB HB3 sing N N 128 CYS SG HG sing N N 129 CYS OXT HXT sing N N 130 GLN N CA sing N N 131 GLN N H sing N N 132 GLN N H2 sing N N 133 GLN CA C sing N N 134 GLN CA CB sing N N 135 GLN CA HA sing N N 136 GLN C O doub N N 137 GLN C OXT sing N N 138 GLN CB CG sing N N 139 GLN CB HB2 sing N N 140 GLN CB HB3 sing N N 141 GLN CG CD sing N N 142 GLN CG HG2 sing N N 143 GLN CG HG3 sing N N 144 GLN CD OE1 doub N N 145 GLN CD NE2 sing N N 146 GLN NE2 HE21 sing N N 147 GLN NE2 HE22 sing N N 148 GLN OXT HXT sing N N 149 GLU N CA sing N N 150 GLU N H sing N N 151 GLU N H2 sing N N 152 GLU CA C sing N N 153 GLU CA CB sing N N 154 GLU CA HA sing N N 155 GLU C O doub N N 156 GLU C OXT sing N N 157 GLU CB CG sing N N 158 GLU CB HB2 sing N N 159 GLU CB HB3 sing N N 160 GLU CG CD sing N N 161 GLU CG HG2 sing N N 162 GLU CG HG3 sing N N 163 GLU CD OE1 doub N N 164 GLU CD OE2 sing N N 165 GLU OE2 HE2 sing N N 166 GLU OXT HXT sing N N 167 GLY N CA sing N N 168 GLY N H sing N N 169 GLY N H2 sing N N 170 GLY CA C sing N N 171 GLY CA HA2 sing N N 172 GLY CA HA3 sing N N 173 GLY C O doub N N 174 GLY C OXT sing N N 175 GLY OXT HXT sing N N 176 HIS N CA sing N N 177 HIS N H sing N N 178 HIS N H2 sing N N 179 HIS CA C sing N N 180 HIS CA CB sing N N 181 HIS CA HA sing N N 182 HIS C O doub N N 183 HIS C OXT sing N N 184 HIS CB CG sing N N 185 HIS CB HB2 sing N N 186 HIS CB HB3 sing N N 187 HIS CG ND1 sing Y N 188 HIS CG CD2 doub Y N 189 HIS ND1 CE1 doub Y N 190 HIS ND1 HD1 sing N N 191 HIS CD2 NE2 sing Y N 192 HIS CD2 HD2 sing N N 193 HIS CE1 NE2 sing Y N 194 HIS CE1 HE1 sing N N 195 HIS NE2 HE2 sing N N 196 HIS OXT HXT sing N N 197 ILE N CA sing N N 198 ILE N H sing N N 199 ILE N H2 sing N N 200 ILE CA C sing N N 201 ILE CA CB sing N N 202 ILE CA HA sing N N 203 ILE C O doub N N 204 ILE C OXT sing N N 205 ILE CB CG1 sing N N 206 ILE CB CG2 sing N N 207 ILE CB HB sing N N 208 ILE CG1 CD1 sing N N 209 ILE CG1 HG12 sing N N 210 ILE CG1 HG13 sing N N 211 ILE CG2 HG21 sing N N 212 ILE CG2 HG22 sing N N 213 ILE CG2 HG23 sing N N 214 ILE CD1 HD11 sing N N 215 ILE CD1 HD12 sing N N 216 ILE CD1 HD13 sing N N 217 ILE OXT HXT sing N N 218 LEU N CA sing N N 219 LEU N H sing N N 220 LEU N H2 sing N N 221 LEU CA C sing N N 222 LEU CA CB sing N N 223 LEU CA HA sing N N 224 LEU C O doub N N 225 LEU C OXT sing N N 226 LEU CB CG sing N N 227 LEU CB HB2 sing N N 228 LEU CB HB3 sing N N 229 LEU CG CD1 sing N N 230 LEU CG CD2 sing N N 231 LEU CG HG sing N N 232 LEU CD1 HD11 sing N N 233 LEU CD1 HD12 sing N N 234 LEU CD1 HD13 sing N N 235 LEU CD2 HD21 sing N N 236 LEU CD2 HD22 sing N N 237 LEU CD2 HD23 sing N N 238 LEU OXT HXT sing N N 239 LYS N CA sing N N 240 LYS N H sing N N 241 LYS N H2 sing N N 242 LYS CA C sing N N 243 LYS CA CB sing N N 244 LYS CA HA sing N N 245 LYS C O doub N N 246 LYS C OXT sing N N 247 LYS CB CG sing N N 248 LYS CB HB2 sing N N 249 LYS CB HB3 sing N N 250 LYS CG CD sing N N 251 LYS CG HG2 sing N N 252 LYS CG HG3 sing N N 253 LYS CD CE sing N N 254 LYS CD HD2 sing N N 255 LYS CD HD3 sing N N 256 LYS CE NZ sing N N 257 LYS CE HE2 sing N N 258 LYS CE HE3 sing N N 259 LYS NZ HZ1 sing N N 260 LYS NZ HZ2 sing N N 261 LYS NZ HZ3 sing N N 262 LYS OXT HXT sing N N 263 MET N CA sing N N 264 MET N H sing N N 265 MET N H2 sing N N 266 MET CA C sing N N 267 MET CA CB sing N N 268 MET CA HA sing N N 269 MET C O doub N N 270 MET C OXT sing N N 271 MET CB CG sing N N 272 MET CB HB2 sing N N 273 MET CB HB3 sing N N 274 MET CG SD sing N N 275 MET CG HG2 sing N N 276 MET CG HG3 sing N N 277 MET SD CE sing N N 278 MET CE HE1 sing N N 279 MET CE HE2 sing N N 280 MET CE HE3 sing N N 281 MET OXT HXT sing N N 282 PHE N CA sing N N 283 PHE N H sing N N 284 PHE N H2 sing N N 285 PHE CA C sing N N 286 PHE CA CB sing N N 287 PHE CA HA sing N N 288 PHE C O doub N N 289 PHE C OXT sing N N 290 PHE CB CG sing N N 291 PHE CB HB2 sing N N 292 PHE CB HB3 sing N N 293 PHE CG CD1 doub Y N 294 PHE CG CD2 sing Y N 295 PHE CD1 CE1 sing Y N 296 PHE CD1 HD1 sing N N 297 PHE CD2 CE2 doub Y N 298 PHE CD2 HD2 sing N N 299 PHE CE1 CZ doub Y N 300 PHE CE1 HE1 sing N N 301 PHE CE2 CZ sing Y N 302 PHE CE2 HE2 sing N N 303 PHE CZ HZ sing N N 304 PHE OXT HXT sing N N 305 SER N CA sing N N 306 SER N H sing N N 307 SER N H2 sing N N 308 SER CA C sing N N 309 SER CA CB sing N N 310 SER CA HA sing N N 311 SER C O doub N N 312 SER C OXT sing N N 313 SER CB OG sing N N 314 SER CB HB2 sing N N 315 SER CB HB3 sing N N 316 SER OG HG sing N N 317 SER OXT HXT sing N N 318 THR N CA sing N N 319 THR N H sing N N 320 THR N H2 sing N N 321 THR CA C sing N N 322 THR CA CB sing N N 323 THR CA HA sing N N 324 THR C O doub N N 325 THR C OXT sing N N 326 THR CB OG1 sing N N 327 THR CB CG2 sing N N 328 THR CB HB sing N N 329 THR OG1 HG1 sing N N 330 THR CG2 HG21 sing N N 331 THR CG2 HG22 sing N N 332 THR CG2 HG23 sing N N 333 THR OXT HXT sing N N 334 TYR N CA sing N N 335 TYR N H sing N N 336 TYR N H2 sing N N 337 TYR CA C sing N N 338 TYR CA CB sing N N 339 TYR CA HA sing N N 340 TYR C O doub N N 341 TYR C OXT sing N N 342 TYR CB CG sing N N 343 TYR CB HB2 sing N N 344 TYR CB HB3 sing N N 345 TYR CG CD1 doub Y N 346 TYR CG CD2 sing Y N 347 TYR CD1 CE1 sing Y N 348 TYR CD1 HD1 sing N N 349 TYR CD2 CE2 doub Y N 350 TYR CD2 HD2 sing N N 351 TYR CE1 CZ doub Y N 352 TYR CE1 HE1 sing N N 353 TYR CE2 CZ sing Y N 354 TYR CE2 HE2 sing N N 355 TYR CZ OH sing N N 356 TYR OH HH sing N N 357 TYR OXT HXT sing N N 358 VAL N CA sing N N 359 VAL N H sing N N 360 VAL N H2 sing N N 361 VAL CA C sing N N 362 VAL CA CB sing N N 363 VAL CA HA sing N N 364 VAL C O doub N N 365 VAL C OXT sing N N 366 VAL CB CG1 sing N N 367 VAL CB CG2 sing N N 368 VAL CB HB sing N N 369 VAL CG1 HG11 sing N N 370 VAL CG1 HG12 sing N N 371 VAL CG1 HG13 sing N N 372 VAL CG2 HG21 sing N N 373 VAL CG2 HG22 sing N N 374 VAL CG2 HG23 sing N N 375 VAL OXT HXT sing N N 376 # _atom_sites.entry_id 3VIR _atom_sites.fract_transf_matrix[1][1] 0.005642 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000666 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017271 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015628 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_