HEADER CELL ADHESION 15-NOV-11 3VKF TITLE CRYSTAL STRUCTURE OF NEUREXIN 1BETA/NEUROLIGIN 1 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEUROLIGIN-1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: ACETYLCHOLINESTERASE-LIKE DOMAIN (UNP RESIDUES 45-638); COMPND 5 SYNONYM: NEUROLIGIN I; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: NEUREXIN-1-BETA; COMPND 9 CHAIN: C, D; COMPND 10 FRAGMENT: LNS DOMAIN (UNP RESIDUES 83-290); COMPND 11 SYNONYM: NEUREXIN I-BETA; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: NLGN1; SOURCE 6 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: CHINESE HAMSTER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: LEC 3.2.8.1; SOURCE 10 EXPRESSION_SYSTEM_CELL_LINE: CHO; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PSGHV0; SOURCE 13 MOL_ID: 2; SOURCE 14 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 15 ORGANISM_COMMON: BOVINE; SOURCE 16 ORGANISM_TAXID: 9913; SOURCE 17 GENE: NRXN1; SOURCE 18 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 20 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 21 EXPRESSION_SYSTEM_VECTOR_TYPE: PLUSMID; SOURCE 22 EXPRESSION_SYSTEM_PLASMID: PGEX-3T KEYWDS ALPHA/BETA HYDROLASE, BETA-SANDWICH, SYNAPSE MATULATION, CALCIUM KEYWDS 2 BINDING, N-GLYCOSYLATION, MEMBRANE, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR H.TANAKA,N.MIYAZAKI,T.NOGI,K.IWASAKI,J.TAKAGI REVDAT 4 06-NOV-24 3VKF 1 HETSYN REVDAT 3 29-JUL-20 3VKF 1 COMPND REMARK SEQADV HETNAM REVDAT 3 2 1 LINK SITE ATOM REVDAT 2 26-JUN-13 3VKF 1 JRNL REVDAT 1 01-AUG-12 3VKF 0 JRNL AUTH H.TANAKA,N.MIYAZAKI,K.MATOBA,T.NOGI,K.IWASAKI,J.TAKAGI JRNL TITL HIGHER-ORDER ARCHITECTURE OF CELL ADHESION MEDIATED BY JRNL TITL 2 POLYMORPHIC SYNAPTIC ADHESION MOLECULES NEUREXIN AND JRNL TITL 3 NEUROLIGIN. JRNL REF CELL REP V. 2 101 2012 JRNL REFN ESSN 2211-1247 JRNL PMID 22840401 JRNL DOI 10.1016/J.CELREP.2012.06.009 REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.91 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 3 NUMBER OF REFLECTIONS : 22921 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2586 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.39 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1591 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.47 REMARK 3 BIN R VALUE (WORKING SET) : 0.2590 REMARK 3 BIN FREE R VALUE SET COUNT : 179 REMARK 3 BIN FREE R VALUE : 0.3440 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11251 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 69 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 58.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 66.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.22000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : 0.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.32000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.697 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.534 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 72.166 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.915 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.842 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 11623 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 15843 ; 1.046 ; 1.956 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1435 ; 5.323 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 539 ;38.123 ;24.490 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1801 ;17.007 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 56 ;15.609 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1740 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8978 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 5474 ; 0.196 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 7816 ; 0.305 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 370 ; 0.122 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 5 ; 0.165 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 93 ; 0.157 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 4 ; 0.055 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 7314 ; 0.225 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 11574 ; 0.410 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4903 ; 0.388 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4269 ; 0.656 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 82 C 288 REMARK 3 RESIDUE RANGE : C 2001 C 2001 REMARK 3 ORIGIN FOR THE GROUP (A): -49.457 -7.102 49.912 REMARK 3 T TENSOR REMARK 3 T11: -0.2104 T22: -0.4154 REMARK 3 T33: -0.1857 T12: -0.0204 REMARK 3 T13: -0.0118 T23: 0.0072 REMARK 3 L TENSOR REMARK 3 L11: 7.8904 L22: 4.7144 REMARK 3 L33: 2.2680 L12: -1.9851 REMARK 3 L13: -2.3528 L23: 1.0554 REMARK 3 S TENSOR REMARK 3 S11: 0.0879 S12: 0.0029 S13: -0.1383 REMARK 3 S21: 0.0762 S22: -0.0961 S23: 0.3074 REMARK 3 S31: 0.0011 S32: -0.0206 S33: 0.0082 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 82 D 288 REMARK 3 RESIDUE RANGE : D 2001 D 2001 REMARK 3 ORIGIN FOR THE GROUP (A): 24.865 -2.006 -15.517 REMARK 3 T TENSOR REMARK 3 T11: -0.1153 T22: -0.1062 REMARK 3 T33: -0.1704 T12: 0.0454 REMARK 3 T13: -0.0477 T23: 0.0822 REMARK 3 L TENSOR REMARK 3 L11: 10.8740 L22: 3.6856 REMARK 3 L33: 3.4474 L12: 0.9156 REMARK 3 L13: -2.3434 L23: 1.8463 REMARK 3 S TENSOR REMARK 3 S11: 0.1303 S12: -0.2886 S13: 0.5725 REMARK 3 S21: 0.0364 S22: 0.0506 S23: -0.1518 REMARK 3 S31: 0.0014 S32: 0.0844 S33: -0.1809 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 52 A 634 REMARK 3 RESIDUE RANGE : A 2001 A 2004 REMARK 3 ORIGIN FOR THE GROUP (A): -8.3500 -1.1511 48.7848 REMARK 3 T TENSOR REMARK 3 T11: -0.2943 T22: -0.3711 REMARK 3 T33: -0.1999 T12: -0.0230 REMARK 3 T13: 0.0230 T23: 0.0349 REMARK 3 L TENSOR REMARK 3 L11: 2.0882 L22: 1.3837 REMARK 3 L33: 2.3528 L12: -0.1052 REMARK 3 L13: 0.0420 L23: 0.1139 REMARK 3 S TENSOR REMARK 3 S11: 0.0107 S12: -0.0125 S13: 0.0242 REMARK 3 S21: -0.1276 S22: -0.0211 S23: -0.1185 REMARK 3 S31: -0.1122 S32: 0.0891 S33: 0.0104 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 52 B 634 REMARK 3 RESIDUE RANGE : B 2001 B 2001 REMARK 3 ORIGIN FOR THE GROUP (A): -16.6257 1.8414 -12.2669 REMARK 3 T TENSOR REMARK 3 T11: -0.1337 T22: -0.1156 REMARK 3 T33: -0.1722 T12: -0.0430 REMARK 3 T13: -0.0201 T23: -0.0340 REMARK 3 L TENSOR REMARK 3 L11: 1.8259 L22: 0.9964 REMARK 3 L33: 4.2944 L12: -0.1321 REMARK 3 L13: 0.2580 L23: -0.6897 REMARK 3 S TENSOR REMARK 3 S11: 0.0317 S12: 0.0825 S13: -0.0786 REMARK 3 S21: -0.0202 S22: -0.0637 S23: 0.0870 REMARK 3 S31: -0.1460 S32: -0.1315 S33: 0.0320 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3VKF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-DEC-11. REMARK 100 THE DEPOSITION ID IS D_1000095155. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-FEB-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25519 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.300 REMARK 200 RESOLUTION RANGE LOW (A) : 48.910 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.31100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CHLORIDE, 0.005M CALCIUM REMARK 280 CHLORIDE, PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 47.59300 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 45 REMARK 465 GLN A 46 REMARK 465 LYS A 47 REMARK 465 LEU A 48 REMARK 465 ASP A 49 REMARK 465 ASP A 50 REMARK 465 VAL A 51 REMARK 465 ASP A 579 REMARK 465 THR A 580 REMARK 465 LYS A 581 REMARK 465 PHE A 582 REMARK 465 ILE A 583 REMARK 465 HIS A 584 REMARK 465 THR A 585 REMARK 465 LYS A 586 REMARK 465 PRO A 587 REMARK 465 ASN A 588 REMARK 465 ARG A 589 REMARK 465 PHE A 590 REMARK 465 GLU A 591 REMARK 465 GLU A 592 REMARK 465 ASN A 635 REMARK 465 LEU A 636 REMARK 465 ASN A 637 REMARK 465 ASP A 638 REMARK 465 SER B 45 REMARK 465 GLN B 46 REMARK 465 LYS B 47 REMARK 465 LEU B 48 REMARK 465 ASP B 49 REMARK 465 ASP B 50 REMARK 465 VAL B 51 REMARK 465 GLU B 163 REMARK 465 ASP B 164 REMARK 465 VAL B 165 REMARK 465 LYS B 166 REMARK 465 ARG B 167 REMARK 465 ILE B 168 REMARK 465 SER B 169 REMARK 465 LYS B 170 REMARK 465 GLU B 171 REMARK 465 CYS B 172 REMARK 465 ALA B 173 REMARK 465 ARG B 174 REMARK 465 LYS B 175 REMARK 465 PRO B 176 REMARK 465 GLY B 177 REMARK 465 LYS B 178 REMARK 465 LYS B 179 REMARK 465 ILE B 180 REMARK 465 CYS B 181 REMARK 465 ARG B 182 REMARK 465 LYS B 183 REMARK 465 GLY B 184 REMARK 465 ASP B 185 REMARK 465 ILE B 186 REMARK 465 ARG B 187 REMARK 465 ASP B 188 REMARK 465 SER B 189 REMARK 465 GLY B 190 REMARK 465 GLY B 444 REMARK 465 TYR B 445 REMARK 465 PRO B 446 REMARK 465 GLU B 447 REMARK 465 GLY B 448 REMARK 465 ASP B 579 REMARK 465 THR B 580 REMARK 465 LYS B 581 REMARK 465 PHE B 582 REMARK 465 ILE B 583 REMARK 465 HIS B 584 REMARK 465 THR B 585 REMARK 465 LYS B 586 REMARK 465 PRO B 587 REMARK 465 ASN B 588 REMARK 465 ARG B 589 REMARK 465 PHE B 590 REMARK 465 GLU B 591 REMARK 465 GLU B 592 REMARK 465 ASN B 635 REMARK 465 LEU B 636 REMARK 465 ASN B 637 REMARK 465 ASP B 638 REMARK 465 GLY C 81 REMARK 465 GLU C 289 REMARK 465 VAL C 290 REMARK 465 SER C 291 REMARK 465 GLY D 81 REMARK 465 GLU D 289 REMARK 465 VAL D 290 REMARK 465 SER D 291 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 72 -57.45 -23.77 REMARK 500 ILE A 73 -81.31 -69.02 REMARK 500 ASP A 106 -154.91 -94.92 REMARK 500 ARG A 125 4.25 -65.50 REMARK 500 LYS A 183 72.04 -155.56 REMARK 500 SER A 203 28.17 -143.73 REMARK 500 THR A 208 127.87 -172.20 REMARK 500 LEU A 232 -162.56 -116.95 REMARK 500 ASP A 242 -145.45 -176.32 REMARK 500 PRO A 272 3.09 -66.88 REMARK 500 VAL A 367 76.03 -114.25 REMARK 500 ASP A 383 -81.44 -152.80 REMARK 500 GLU A 397 59.22 -110.19 REMARK 500 GLU A 417 48.53 -65.66 REMARK 500 ASN A 418 -35.32 -143.91 REMARK 500 ASP A 424 63.46 39.42 REMARK 500 TYR A 445 -109.68 -103.45 REMARK 500 PRO A 446 -177.65 -61.49 REMARK 500 GLU A 447 -56.70 108.11 REMARK 500 ASP A 465 65.45 -151.38 REMARK 500 PHE A 499 36.71 -87.90 REMARK 500 THR A 514 -150.54 -86.77 REMARK 500 ASP A 522 -153.46 -86.10 REMARK 500 ASP A 527 -16.73 -45.57 REMARK 500 TRP A 595 96.93 -63.55 REMARK 500 HIS A 617 80.57 45.65 REMARK 500 GLU A 628 -60.02 -103.22 REMARK 500 ASN B 70 40.58 -79.05 REMARK 500 PRO B 88 109.19 -49.36 REMARK 500 ASP B 106 -143.86 -95.52 REMARK 500 ASN B 109 71.52 -66.85 REMARK 500 SER B 203 14.25 -140.06 REMARK 500 ALA B 218 -70.00 -64.80 REMARK 500 ASN B 343 86.86 -68.92 REMARK 500 SER B 345 -71.47 -45.42 REMARK 500 TYR B 372 -6.69 80.52 REMARK 500 ASP B 383 -70.82 -136.32 REMARK 500 ASN B 418 3.55 -62.40 REMARK 500 PRO B 502 88.57 -60.20 REMARK 500 ASN B 547 98.02 -60.33 REMARK 500 ASP B 571 108.94 -167.60 REMARK 500 GLN B 603 63.83 38.93 REMARK 500 HIS B 617 75.83 40.67 REMARK 500 HIS B 632 72.27 -105.01 REMARK 500 SER C 89 -158.44 -121.51 REMARK 500 LYS C 90 123.20 -34.34 REMARK 500 PRO C 100 137.70 -37.60 REMARK 500 THR C 155 -87.85 -91.50 REMARK 500 GLU C 162 90.22 -69.13 REMARK 500 ASN C 164 61.72 -110.73 REMARK 500 REMARK 500 THIS ENTRY HAS 63 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C2001 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 136 OD2 REMARK 620 2 VAL C 153 O 75.7 REMARK 620 3 ILE C 235 O 71.4 70.9 REMARK 620 4 ASN C 237 OD1 68.8 135.1 72.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D2001 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 136 OD2 REMARK 620 2 VAL D 153 O 78.2 REMARK 620 3 ILE D 235 O 97.8 97.6 REMARK 620 4 ASN D 237 OD1 77.9 150.5 102.6 REMARK 620 N 1 2 3 REMARK 999 REMARK 999 SEQUENCE REMARK 999 SEQUENCE OF THE CHAIN A/B WAS BASED ON ISOFORM 3 OF DATABASE Q62765 REMARK 999 (NLGN1_RAT). SEQUENCE OF THE CHAIN C/D WAS BASED ON ISOFORM 3B OF REMARK 999 DATABASE Q28142 (NRX1B_BOVIN). DBREF 3VKF A 45 638 UNP Q62765 NLGN1_RAT 45 638 DBREF 3VKF B 45 638 UNP Q62765 NLGN1_RAT 45 638 DBREF 3VKF C 83 290 UNP Q28142 NRX1B_BOVIN 83 290 DBREF 3VKF D 83 290 UNP Q28142 NRX1B_BOVIN 83 290 SEQADV 3VKF GLY C 81 UNP Q28142 EXPRESSION TAG SEQADV 3VKF SER C 82 UNP Q28142 EXPRESSION TAG SEQADV 3VKF SER C 291 UNP Q28142 EXPRESSION TAG SEQADV 3VKF GLY D 81 UNP Q28142 EXPRESSION TAG SEQADV 3VKF SER D 82 UNP Q28142 EXPRESSION TAG SEQADV 3VKF SER D 291 UNP Q28142 EXPRESSION TAG SEQRES 1 A 585 SER GLN LYS LEU ASP ASP VAL ASP PRO LEU VAL THR THR SEQRES 2 A 585 ASN PHE GLY LYS ILE ARG GLY ILE LYS LYS GLU LEU ASN SEQRES 3 A 585 ASN GLU ILE LEU GLY PRO VAL ILE GLN PHE LEU GLY VAL SEQRES 4 A 585 PRO TYR ALA ALA PRO PRO THR GLY GLU HIS ARG PHE GLN SEQRES 5 A 585 PRO PRO GLU PRO PRO SER PRO TRP SER ASP ILE ARG ASN SEQRES 6 A 585 ALA THR GLN PHE ALA PRO VAL CYS PRO GLN ASN ILE ILE SEQRES 7 A 585 ASP GLY ARG LEU PRO GLU VAL MET LEU PRO VAL TRP PHE SEQRES 8 A 585 THR ASN ASN LEU ASP VAL VAL SER SER TYR VAL GLN ASP SEQRES 9 A 585 GLN SER GLU ASP CYS LEU TYR LEU ASN ILE TYR VAL PRO SEQRES 10 A 585 THR GLU ASP VAL LYS ARG ILE SER LYS GLU CYS ALA ARG SEQRES 11 A 585 LYS PRO GLY LYS LYS ILE CYS ARG LYS GLY ASP ILE ARG SEQRES 12 A 585 ASP SER GLY GLY PRO LYS PRO VAL MET VAL TYR ILE HIS SEQRES 13 A 585 GLY GLY SER TYR MET GLU GLY THR GLY ASN LEU TYR ASP SEQRES 14 A 585 GLY SER VAL LEU ALA SER TYR GLY ASN VAL ILE VAL ILE SEQRES 15 A 585 THR VAL ASN TYR ARG LEU GLY VAL LEU GLY PHE LEU SER SEQRES 16 A 585 THR GLY ASP GLN ALA ALA LYS GLY ASN TYR GLY LEU LEU SEQRES 17 A 585 ASP LEU ILE GLN ALA LEU ARG TRP THR SER GLU ASN ILE SEQRES 18 A 585 GLY PHE PHE GLY GLY ASP PRO LEU ARG ILE THR VAL PHE SEQRES 19 A 585 GLY SER GLY ALA GLY GLY SER CYS VAL ASN LEU LEU THR SEQRES 20 A 585 LEU SER HIS TYR SER GLU GLY LEU PHE GLN ARG ALA ILE SEQRES 21 A 585 ALA GLN SER GLY THR ALA LEU SER SER TRP ALA VAL SER SEQRES 22 A 585 PHE GLN PRO ALA LYS TYR ALA ARG ILE LEU ALA THR LYS SEQRES 23 A 585 VAL GLY CYS ASN VAL SER ASP THR VAL GLU LEU VAL GLU SEQRES 24 A 585 CYS LEU GLN LYS LYS PRO TYR LYS GLU LEU VAL ASP GLN SEQRES 25 A 585 ASP VAL GLN PRO ALA ARG TYR HIS ILE ALA PHE GLY PRO SEQRES 26 A 585 VAL ILE ASP GLY ASP VAL ILE PRO ASP ASP PRO GLN ILE SEQRES 27 A 585 LEU MET GLU GLN GLY GLU PHE LEU ASN TYR ASP ILE MET SEQRES 28 A 585 LEU GLY VAL ASN GLN GLY GLU GLY LEU LYS PHE VAL GLU SEQRES 29 A 585 ASN ILE VAL ASP SER ASP ASP GLY VAL SER ALA SER ASP SEQRES 30 A 585 PHE ASP PHE ALA VAL SER ASN PHE VAL ASP ASN LEU TYR SEQRES 31 A 585 GLY TYR PRO GLU GLY LYS ASP VAL LEU ARG GLU THR ILE SEQRES 32 A 585 LYS PHE MET TYR THR ASP TRP ALA ASP ARG HIS ASN PRO SEQRES 33 A 585 GLU THR ARG ARG LYS THR LEU LEU ALA LEU PHE THR ASP SEQRES 34 A 585 HIS GLN TRP VAL ALA PRO ALA VAL ALA THR ALA ASP LEU SEQRES 35 A 585 HIS SER ASN PHE GLY SER PRO THR TYR PHE TYR ALA PHE SEQRES 36 A 585 TYR HIS HIS CYS GLN THR ASP GLN VAL PRO ALA TRP ALA SEQRES 37 A 585 ASP ALA ALA HIS GLY ASP GLU VAL PRO TYR VAL LEU GLY SEQRES 38 A 585 ILE PRO MET ILE GLY PRO THR GLU LEU PHE PRO CYS ASN SEQRES 39 A 585 PHE SER LYS ASN ASP VAL MET LEU SER ALA VAL VAL MET SEQRES 40 A 585 THR TYR TRP THR ASN PHE ALA LYS THR GLY ASP PRO ASN SEQRES 41 A 585 GLN PRO VAL PRO GLN ASP THR LYS PHE ILE HIS THR LYS SEQRES 42 A 585 PRO ASN ARG PHE GLU GLU VAL ALA TRP THR ARG TYR SER SEQRES 43 A 585 GLN LYS ASP GLN LEU TYR LEU HIS ILE GLY LEU LYS PRO SEQRES 44 A 585 ARG VAL LYS GLU HIS TYR ARG ALA ASN LYS VAL ASN LEU SEQRES 45 A 585 TRP LEU GLU LEU VAL PRO HIS LEU HIS ASN LEU ASN ASP SEQRES 1 B 585 SER GLN LYS LEU ASP ASP VAL ASP PRO LEU VAL THR THR SEQRES 2 B 585 ASN PHE GLY LYS ILE ARG GLY ILE LYS LYS GLU LEU ASN SEQRES 3 B 585 ASN GLU ILE LEU GLY PRO VAL ILE GLN PHE LEU GLY VAL SEQRES 4 B 585 PRO TYR ALA ALA PRO PRO THR GLY GLU HIS ARG PHE GLN SEQRES 5 B 585 PRO PRO GLU PRO PRO SER PRO TRP SER ASP ILE ARG ASN SEQRES 6 B 585 ALA THR GLN PHE ALA PRO VAL CYS PRO GLN ASN ILE ILE SEQRES 7 B 585 ASP GLY ARG LEU PRO GLU VAL MET LEU PRO VAL TRP PHE SEQRES 8 B 585 THR ASN ASN LEU ASP VAL VAL SER SER TYR VAL GLN ASP SEQRES 9 B 585 GLN SER GLU ASP CYS LEU TYR LEU ASN ILE TYR VAL PRO SEQRES 10 B 585 THR GLU ASP VAL LYS ARG ILE SER LYS GLU CYS ALA ARG SEQRES 11 B 585 LYS PRO GLY LYS LYS ILE CYS ARG LYS GLY ASP ILE ARG SEQRES 12 B 585 ASP SER GLY GLY PRO LYS PRO VAL MET VAL TYR ILE HIS SEQRES 13 B 585 GLY GLY SER TYR MET GLU GLY THR GLY ASN LEU TYR ASP SEQRES 14 B 585 GLY SER VAL LEU ALA SER TYR GLY ASN VAL ILE VAL ILE SEQRES 15 B 585 THR VAL ASN TYR ARG LEU GLY VAL LEU GLY PHE LEU SER SEQRES 16 B 585 THR GLY ASP GLN ALA ALA LYS GLY ASN TYR GLY LEU LEU SEQRES 17 B 585 ASP LEU ILE GLN ALA LEU ARG TRP THR SER GLU ASN ILE SEQRES 18 B 585 GLY PHE PHE GLY GLY ASP PRO LEU ARG ILE THR VAL PHE SEQRES 19 B 585 GLY SER GLY ALA GLY GLY SER CYS VAL ASN LEU LEU THR SEQRES 20 B 585 LEU SER HIS TYR SER GLU GLY LEU PHE GLN ARG ALA ILE SEQRES 21 B 585 ALA GLN SER GLY THR ALA LEU SER SER TRP ALA VAL SER SEQRES 22 B 585 PHE GLN PRO ALA LYS TYR ALA ARG ILE LEU ALA THR LYS SEQRES 23 B 585 VAL GLY CYS ASN VAL SER ASP THR VAL GLU LEU VAL GLU SEQRES 24 B 585 CYS LEU GLN LYS LYS PRO TYR LYS GLU LEU VAL ASP GLN SEQRES 25 B 585 ASP VAL GLN PRO ALA ARG TYR HIS ILE ALA PHE GLY PRO SEQRES 26 B 585 VAL ILE ASP GLY ASP VAL ILE PRO ASP ASP PRO GLN ILE SEQRES 27 B 585 LEU MET GLU GLN GLY GLU PHE LEU ASN TYR ASP ILE MET SEQRES 28 B 585 LEU GLY VAL ASN GLN GLY GLU GLY LEU LYS PHE VAL GLU SEQRES 29 B 585 ASN ILE VAL ASP SER ASP ASP GLY VAL SER ALA SER ASP SEQRES 30 B 585 PHE ASP PHE ALA VAL SER ASN PHE VAL ASP ASN LEU TYR SEQRES 31 B 585 GLY TYR PRO GLU GLY LYS ASP VAL LEU ARG GLU THR ILE SEQRES 32 B 585 LYS PHE MET TYR THR ASP TRP ALA ASP ARG HIS ASN PRO SEQRES 33 B 585 GLU THR ARG ARG LYS THR LEU LEU ALA LEU PHE THR ASP SEQRES 34 B 585 HIS GLN TRP VAL ALA PRO ALA VAL ALA THR ALA ASP LEU SEQRES 35 B 585 HIS SER ASN PHE GLY SER PRO THR TYR PHE TYR ALA PHE SEQRES 36 B 585 TYR HIS HIS CYS GLN THR ASP GLN VAL PRO ALA TRP ALA SEQRES 37 B 585 ASP ALA ALA HIS GLY ASP GLU VAL PRO TYR VAL LEU GLY SEQRES 38 B 585 ILE PRO MET ILE GLY PRO THR GLU LEU PHE PRO CYS ASN SEQRES 39 B 585 PHE SER LYS ASN ASP VAL MET LEU SER ALA VAL VAL MET SEQRES 40 B 585 THR TYR TRP THR ASN PHE ALA LYS THR GLY ASP PRO ASN SEQRES 41 B 585 GLN PRO VAL PRO GLN ASP THR LYS PHE ILE HIS THR LYS SEQRES 42 B 585 PRO ASN ARG PHE GLU GLU VAL ALA TRP THR ARG TYR SER SEQRES 43 B 585 GLN LYS ASP GLN LEU TYR LEU HIS ILE GLY LEU LYS PRO SEQRES 44 B 585 ARG VAL LYS GLU HIS TYR ARG ALA ASN LYS VAL ASN LEU SEQRES 45 B 585 TRP LEU GLU LEU VAL PRO HIS LEU HIS ASN LEU ASN ASP SEQRES 1 C 181 GLY SER GLY THR THR TYR ILE PHE SER LYS GLY GLY GLY SEQRES 2 C 181 GLN ILE THR TYR LYS TRP PRO PRO ASN ASP ARG PRO SER SEQRES 3 C 181 THR ARG ALA ASP ARG LEU ALA ILE GLY PHE SER THR VAL SEQRES 4 C 181 GLN LYS GLU ALA VAL LEU VAL ARG VAL ASP SER SER SER SEQRES 5 C 181 GLY LEU GLY ASP TYR LEU GLU LEU HIS ILE HIS GLN GLY SEQRES 6 C 181 LYS ILE GLY VAL LYS PHE ASN VAL GLY THR ASP ASP ILE SEQRES 7 C 181 ALA ILE GLU GLU SER ASN ALA ILE ILE ASN ASP GLY LYS SEQRES 8 C 181 TYR HIS VAL VAL ARG PHE THR ARG SER GLY GLY ASN ALA SEQRES 9 C 181 THR LEU GLN VAL ASP SER TRP PRO VAL ILE GLU ARG TYR SEQRES 10 C 181 PRO ALA GLY ARG GLN LEU THR ILE PHE ASN SER GLN ALA SEQRES 11 C 181 THR ILE ILE ILE GLY GLY LYS GLU GLN GLY GLN PRO PHE SEQRES 12 C 181 GLN GLY GLN LEU SER GLY LEU TYR TYR ASN GLY LEU LYS SEQRES 13 C 181 VAL LEU ASN MET ALA ALA GLU ASN ASP ALA ASN ILE ALA SEQRES 14 C 181 ILE VAL GLY ASN VAL ARG LEU VAL GLY GLU VAL SER SEQRES 1 D 181 GLY SER GLY THR THR TYR ILE PHE SER LYS GLY GLY GLY SEQRES 2 D 181 GLN ILE THR TYR LYS TRP PRO PRO ASN ASP ARG PRO SER SEQRES 3 D 181 THR ARG ALA ASP ARG LEU ALA ILE GLY PHE SER THR VAL SEQRES 4 D 181 GLN LYS GLU ALA VAL LEU VAL ARG VAL ASP SER SER SER SEQRES 5 D 181 GLY LEU GLY ASP TYR LEU GLU LEU HIS ILE HIS GLN GLY SEQRES 6 D 181 LYS ILE GLY VAL LYS PHE ASN VAL GLY THR ASP ASP ILE SEQRES 7 D 181 ALA ILE GLU GLU SER ASN ALA ILE ILE ASN ASP GLY LYS SEQRES 8 D 181 TYR HIS VAL VAL ARG PHE THR ARG SER GLY GLY ASN ALA SEQRES 9 D 181 THR LEU GLN VAL ASP SER TRP PRO VAL ILE GLU ARG TYR SEQRES 10 D 181 PRO ALA GLY ARG GLN LEU THR ILE PHE ASN SER GLN ALA SEQRES 11 D 181 THR ILE ILE ILE GLY GLY LYS GLU GLN GLY GLN PRO PHE SEQRES 12 D 181 GLN GLY GLN LEU SER GLY LEU TYR TYR ASN GLY LEU LYS SEQRES 13 D 181 VAL LEU ASN MET ALA ALA GLU ASN ASP ALA ASN ILE ALA SEQRES 14 D 181 ILE VAL GLY ASN VAL ARG LEU VAL GLY GLU VAL SER MODRES 3VKF ASN A 343 ASN GLYCOSYLATION SITE MODRES 3VKF ASN B 343 ASN GLYCOSYLATION SITE MODRES 3VKF ASN A 547 ASN GLYCOSYLATION SITE HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET NAG A2001 14 HET NAG B2001 14 HET CA C2001 1 HET CA D2001 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM CA CALCIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 5 NAG 4(C8 H15 N O6) FORMUL 5 BMA C6 H12 O6 FORMUL 8 CA 2(CA 2+) HELIX 1 1 THR A 90 ARG A 94 5 5 HELIX 2 2 PRO A 132 ASN A 138 1 7 HELIX 3 3 ASN A 138 GLN A 147 1 10 HELIX 4 4 ILE A 168 LYS A 175 1 8 HELIX 5 5 LYS A 178 LYS A 183 1 6 HELIX 6 6 THR A 208 TYR A 212 5 5 HELIX 7 7 GLY A 214 GLY A 221 1 8 HELIX 8 8 ASN A 248 GLY A 269 1 22 HELIX 9 9 GLY A 281 SER A 293 1 13 HELIX 10 10 HIS A 294 GLU A 297 5 4 HELIX 11 11 GLN A 328 VAL A 340 1 13 HELIX 12 12 ASP A 346 LYS A 357 1 12 HELIX 13 13 PRO A 358 ASP A 364 1 7 HELIX 14 14 ASP A 388 GLN A 395 1 8 HELIX 15 15 GLY A 412 VAL A 416 5 5 HELIX 16 16 SER A 427 TYR A 443 1 17 HELIX 17 17 GLY A 448 TYR A 460 1 13 HELIX 18 18 ASP A 462 ARG A 466 5 5 HELIX 19 19 ASN A 468 TRP A 485 1 18 HELIX 20 20 TRP A 485 PHE A 499 1 15 HELIX 21 21 GLU A 528 GLY A 534 1 7 HELIX 22 22 ILE A 535 ILE A 538 5 4 HELIX 23 23 SER A 549 GLY A 570 1 22 HELIX 24 24 ARG A 619 GLU A 628 1 10 HELIX 25 25 LEU A 629 LEU A 633 5 5 HELIX 26 26 THR B 90 ARG B 94 5 5 HELIX 27 27 PRO B 132 ASN B 138 1 7 HELIX 28 28 ASN B 138 SER B 143 1 6 HELIX 29 29 THR B 208 TYR B 212 5 5 HELIX 30 30 GLY B 214 ASN B 222 1 9 HELIX 31 31 LEU B 232 LEU B 238 1 7 HELIX 32 32 ASN B 248 ILE B 265 1 18 HELIX 33 33 GLY B 281 LEU B 292 1 12 HELIX 34 34 SER B 293 GLU B 297 5 5 HELIX 35 35 GLN B 328 VAL B 340 1 13 HELIX 36 36 ASP B 346 LYS B 357 1 12 HELIX 37 37 PRO B 358 ASP B 364 1 7 HELIX 38 38 GLN B 390 GLN B 395 1 6 HELIX 39 39 GLY B 412 GLU B 417 1 6 HELIX 40 40 ASN B 418 VAL B 420 5 3 HELIX 41 41 SER B 427 TYR B 443 1 17 HELIX 42 42 ASP B 450 TYR B 460 1 11 HELIX 43 43 GLU B 470 TRP B 485 1 16 HELIX 44 44 TRP B 485 ASN B 498 1 14 HELIX 45 45 GLU B 528 LEU B 533 1 6 HELIX 46 46 GLY B 534 ILE B 538 5 5 HELIX 47 47 SER B 549 GLY B 570 1 22 HELIX 48 48 ARG B 619 LEU B 629 1 11 HELIX 49 49 PRO C 100 ARG C 104 5 5 HELIX 50 50 VAL C 267 GLU C 273 1 7 HELIX 51 51 PRO D 100 ARG D 104 5 5 HELIX 52 52 GLY D 246 GLY D 250 5 5 HELIX 53 53 VAL D 267 ALA D 271 1 5 HELIX 54 54 ALA D 272 ASN D 274 5 3 SHEET 1 A 3 LEU A 54 THR A 57 0 SHEET 2 A 3 GLY A 60 ARG A 63 -1 O ILE A 62 N VAL A 55 SHEET 3 A 3 ILE A 107 ASN A 109 1 O ARG A 108 N ARG A 63 SHEET 1 B11 ILE A 65 LYS A 67 0 SHEET 2 B11 VAL A 77 PRO A 84 -1 O GLN A 79 N ILE A 65 SHEET 3 B11 TYR A 155 PRO A 161 -1 O VAL A 160 N ILE A 78 SHEET 4 B11 ILE A 224 VAL A 228 -1 O VAL A 225 N TYR A 159 SHEET 5 B11 LYS A 193 ILE A 199 1 N MET A 196 O ILE A 226 SHEET 6 B11 GLY A 270 SER A 280 1 O PHE A 278 N VAL A 197 SHEET 7 B11 ARG A 311 GLN A 315 1 O GLN A 315 N GLY A 279 SHEET 8 B11 ASP A 402 ASN A 408 1 O ASP A 402 N ALA A 312 SHEET 9 B11 THR A 503 PHE A 508 1 O TYR A 504 N LEU A 405 SHEET 10 B11 LEU A 604 ILE A 608 1 O LEU A 606 N PHE A 505 SHEET 11 B11 ARG A 613 GLU A 616 -1 O ARG A 613 N HIS A 607 SHEET 1 C 3 LEU B 54 THR B 57 0 SHEET 2 C 3 GLY B 60 ARG B 63 -1 O GLY B 60 N THR B 57 SHEET 3 C 3 ILE B 107 ASN B 109 1 O ARG B 108 N LYS B 61 SHEET 1 D 8 ILE B 65 LYS B 67 0 SHEET 2 D 8 VAL B 77 PRO B 84 -1 O GLN B 79 N ILE B 65 SHEET 3 D 8 TYR B 155 PRO B 161 -1 O VAL B 160 N ILE B 78 SHEET 4 D 8 ILE B 224 VAL B 228 -1 O THR B 227 N ASN B 157 SHEET 5 D 8 LYS B 193 ILE B 199 1 N TYR B 198 O ILE B 226 SHEET 6 D 8 GLY B 270 SER B 280 1 O PHE B 278 N VAL B 197 SHEET 7 D 8 ARG B 311 GLN B 315 1 O GLN B 315 N GLY B 279 SHEET 8 D 8 ASP B 402 MET B 404 1 O ASP B 402 N ALA B 312 SHEET 1 E 4 VAL B 407 ASN B 408 0 SHEET 2 E 4 PHE B 505 PHE B 508 1 O TYR B 506 N VAL B 407 SHEET 3 E 4 LEU B 604 ILE B 608 1 O ILE B 608 N ALA B 507 SHEET 4 E 4 ARG B 613 GLU B 616 -1 O ARG B 613 N HIS B 607 SHEET 1 F 8 ILE C 158 GLU C 161 0 SHEET 2 F 8 LYS C 146 ASN C 152 -1 N PHE C 151 O ILE C 158 SHEET 3 F 8 TYR C 137 HIS C 143 -1 N GLU C 139 O LYS C 150 SHEET 4 F 8 ALA C 123 SER C 130 -1 N VAL C 126 O LEU C 140 SHEET 5 F 8 GLN C 239 ILE C 244 -1 O ILE C 243 N ARG C 127 SHEET 6 F 8 TYR C 86 LYS C 98 -1 N TYR C 97 O ILE C 242 SHEET 7 F 8 GLY C 255 TYR C 262 -1 O LEU C 257 N TYR C 86 SHEET 8 F 8 LEU C 265 LYS C 266 -1 O LEU C 265 N TYR C 262 SHEET 1 G 7 ILE C 194 ARG C 196 0 SHEET 2 G 7 ASN C 183 VAL C 188 -1 N LEU C 186 O ILE C 194 SHEET 3 G 7 HIS C 173 SER C 180 -1 N ARG C 176 O GLN C 187 SHEET 4 G 7 ALA C 109 THR C 118 -1 N LEU C 112 O PHE C 177 SHEET 5 G 7 GLY C 255 TYR C 262 -1 O SER C 258 N GLY C 115 SHEET 6 G 7 TYR C 86 LYS C 98 -1 N TYR C 86 O LEU C 257 SHEET 7 G 7 ILE C 278 LEU C 286 -1 O ARG C 285 N ILE C 87 SHEET 1 H 8 ILE D 158 GLU D 161 0 SHEET 2 H 8 LYS D 146 ASN D 152 -1 N VAL D 149 O ILE D 160 SHEET 3 H 8 TYR D 137 HIS D 143 -1 N HIS D 143 O LYS D 146 SHEET 4 H 8 ALA D 123 SER D 130 -1 N VAL D 126 O LEU D 140 SHEET 5 H 8 GLN D 239 ILE D 244 -1 O ALA D 240 N ASP D 129 SHEET 6 H 8 THR D 85 LYS D 98 -1 N TYR D 97 O ILE D 242 SHEET 7 H 8 GLY D 255 TYR D 262 -1 O GLY D 255 N PHE D 88 SHEET 8 H 8 LEU D 265 LYS D 266 -1 O LEU D 265 N TYR D 262 SHEET 1 I 7 ILE D 194 ARG D 196 0 SHEET 2 I 7 ASN D 183 VAL D 188 -1 N ALA D 184 O ARG D 196 SHEET 3 I 7 HIS D 173 SER D 180 -1 N THR D 178 O THR D 185 SHEET 4 I 7 ALA D 109 THR D 118 -1 N LEU D 112 O PHE D 177 SHEET 5 I 7 GLY D 255 TYR D 262 -1 O TYR D 261 N ALA D 113 SHEET 6 I 7 THR D 85 LYS D 98 -1 N PHE D 88 O GLY D 255 SHEET 7 I 7 ALA D 279 LEU D 286 -1 O ARG D 285 N ILE D 87 SSBOND 1 CYS A 117 CYS A 153 1555 1555 2.05 SSBOND 2 CYS A 172 CYS A 181 1555 1555 2.03 SSBOND 3 CYS A 342 CYS A 353 1555 1555 2.03 SSBOND 4 CYS A 512 CYS A 546 1555 1555 2.04 SSBOND 5 CYS B 117 CYS B 153 1555 1555 2.04 SSBOND 6 CYS B 342 CYS B 353 1555 1555 2.04 SSBOND 7 CYS B 512 CYS B 546 1555 1555 2.04 LINK ND2 ASN A 343 C1 NAG A2001 1555 1555 1.44 LINK ND2 ASN A 547 C1 NAG E 1 1555 1555 1.45 LINK ND2 ASN B 343 C1 NAG B2001 1555 1555 1.45 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.45 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.45 LINK OD2 ASP C 136 CA CA C2001 1555 1555 2.49 LINK O VAL C 153 CA CA C2001 1555 1555 2.38 LINK O ILE C 235 CA CA C2001 1555 1555 2.75 LINK OD1 ASN C 237 CA CA C2001 1555 1555 2.31 LINK OD2 ASP D 136 CA CA D2001 1555 1555 2.45 LINK O VAL D 153 CA CA D2001 1555 1555 2.09 LINK O ILE D 235 CA CA D2001 1555 1555 2.30 LINK OD1 ASN D 237 CA CA D2001 1555 1555 2.39 CISPEP 1 GLN A 574 PRO A 575 0 0.09 CISPEP 2 GLN B 574 PRO B 575 0 -5.57 CRYST1 81.261 95.186 120.396 90.00 108.62 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012306 0.000000 0.004146 0.00000 SCALE2 0.000000 0.010506 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008765 0.00000