HEADER ISOMERASE 17-NOV-11 3VKJ TITLE CRYSTAL STRUCTURE OF SULFOLOBUS SHIBATAE ISOPENTENYL DIPHOSPHATE TITLE 2 ISOMERASE, OCTAMERIC FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: IPP ISOMERASE, ISOPENTENYL PYROPHOSPHATE ISOMERASE; COMPND 5 EC: 5.3.3.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS SHIBATAE; SOURCE 3 ORGANISM_TAXID: 2286; SOURCE 4 GENE: FNI, IDI; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS TYPE 2 ISOPENTENYL DIPHOSPHATE ISOMERASE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.NAKATANI,S.GODA,H.UNNO,T.NAGAI,T.YOSHIMURA,H.HEMMI REVDAT 3 20-MAR-24 3VKJ 1 REMARK REVDAT 2 11-JUL-12 3VKJ 1 JRNL REVDAT 1 30-MAY-12 3VKJ 0 JRNL AUTH H.NAKATANI,S.GODA,H.UNNO,T.NAGAI,T.YOSHIMURA,H.HEMMI JRNL TITL SUBSTRATE-INDUCED CHANGE IN THE QUATERNARY STRUCTURE OF TYPE JRNL TITL 2 2 ISOPENTENYL DIPHOSPHATE ISOMERASE FROM SULFOLOBUS JRNL TITL 3 SHIBATAE. JRNL REF J.BACTERIOL. V. 194 3216 2012 JRNL REFN ISSN 0021-9193 JRNL PMID 22505674 JRNL DOI 10.1128/JB.00068-12 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.15 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.6 REMARK 3 NUMBER OF REFLECTIONS : 170951 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 9047 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.75 REMARK 3 REFLECTION IN BIN (WORKING SET) : 10030 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 77.10 REMARK 3 BIN R VALUE (WORKING SET) : 0.2290 REMARK 3 BIN FREE R VALUE SET COUNT : 580 REMARK 3 BIN FREE R VALUE : 0.2710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11200 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 124 REMARK 3 SOLVENT ATOMS : 724 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.101 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.057 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.689 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 11520 ; 0.033 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 15540 ; 2.628 ; 1.984 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1448 ; 6.077 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 460 ;35.912 ;24.522 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2124 ;16.277 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 64 ;20.046 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1756 ; 0.251 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8344 ; 0.014 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 7180 ; 1.319 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 11552 ; 2.331 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4340 ; 3.649 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3988 ; 6.033 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 3 A 365 1 REMARK 3 1 B 3 B 365 1 REMARK 3 1 C 3 C 365 1 REMARK 3 1 D 3 D 365 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 2791 ; 0.18 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 B (A): 2791 ; 0.17 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 C (A): 2791 ; 0.19 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 D (A): 2791 ; 0.17 ; 0.05 REMARK 3 TIGHT THERMAL 1 A (A**2): 2791 ; 0.58 ; 0.50 REMARK 3 TIGHT THERMAL 1 B (A**2): 2791 ; 0.56 ; 0.50 REMARK 3 TIGHT THERMAL 1 C (A**2): 2791 ; 0.67 ; 0.50 REMARK 3 TIGHT THERMAL 1 D (A**2): 2791 ; 0.53 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 669 A 669 4 REMARK 3 1 B 669 B 669 4 REMARK 3 1 C 669 C 669 4 REMARK 3 1 D 669 D 669 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 2 A (A): 31 ; 0.04 ; 0.50 REMARK 3 MEDIUM POSITIONAL 2 B (A): 31 ; 0.05 ; 0.50 REMARK 3 MEDIUM POSITIONAL 2 C (A): 31 ; 0.05 ; 0.50 REMARK 3 MEDIUM POSITIONAL 2 D (A): 31 ; 0.04 ; 0.50 REMARK 3 MEDIUM THERMAL 2 A (A**2): 31 ; 0.96 ; 2.00 REMARK 3 MEDIUM THERMAL 2 B (A**2): 31 ; 1.14 ; 2.00 REMARK 3 MEDIUM THERMAL 2 C (A**2): 31 ; 1.21 ; 2.00 REMARK 3 MEDIUM THERMAL 2 D (A**2): 31 ; 1.14 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3VKJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-DEC-11. REMARK 100 THE DEPOSITION ID IS D_1000095159. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 180131 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 200 DATA REDUNDANCY : 8.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 77.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL, 0.2M SODIUM CITRATE, REMARK 280 30% PEG 400, PH 8.0, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 168.32550 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 50.42050 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 50.42050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 252.48825 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 50.42050 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 50.42050 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 84.16275 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 50.42050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 50.42050 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 252.48825 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 50.42050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.42050 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 84.16275 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 168.32550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 37960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 90670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -276.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 ASP A 3 REMARK 465 ARG A 367 REMARK 465 GLU A 368 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 ASP B 3 REMARK 465 ARG B 367 REMARK 465 GLU B 368 REMARK 465 MET C 1 REMARK 465 PRO C 2 REMARK 465 ASP C 3 REMARK 465 ARG C 367 REMARK 465 GLU C 368 REMARK 465 MET D 1 REMARK 465 PRO D 2 REMARK 465 ASP D 3 REMARK 465 ARG D 367 REMARK 465 GLU D 368 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH D 517 O HOH D 653 1.53 REMARK 500 CB VAL D 265 O HOH D 573 1.59 REMARK 500 OD1 ASN C 30 O HOH C 598 1.68 REMARK 500 CG1 ILE C 90 O HOH C 593 1.71 REMARK 500 O HOH D 528 O HOH D 552 1.74 REMARK 500 O HOH D 552 O HOH D 587 1.75 REMARK 500 CB ILE C 90 O HOH C 593 1.77 REMARK 500 O HOH D 539 O HOH D 640 1.80 REMARK 500 NE2 GLN C 130 O HOH C 657 1.80 REMARK 500 CE1 TYR A 361 O HOH A 614 1.82 REMARK 500 CG2 VAL D 265 O HOH D 573 1.82 REMARK 500 OE1 GLN C 130 O HOH C 579 1.84 REMARK 500 O HOH C 543 O HOH C 694 1.88 REMARK 500 CD1 ILE C 90 O HOH C 593 1.90 REMARK 500 O LYS D 366 O HOH D 656 1.93 REMARK 500 O HOH A 531 O HOH A 654 1.96 REMARK 500 NH1 ARG B 107 O HOH B 576 2.01 REMARK 500 O HOH D 528 O HOH D 664 2.01 REMARK 500 O HOH A 559 O HOH A 654 2.04 REMARK 500 O HOH C 572 O HOH C 580 2.05 REMARK 500 O HOH B 553 O HOH B 662 2.05 REMARK 500 O HOH D 528 O HOH D 580 2.10 REMARK 500 O HOH B 571 O HOH B 596 2.13 REMARK 500 OE2 GLU C 170 O HOH C 655 2.13 REMARK 500 O HOH A 572 O HOH A 579 2.13 REMARK 500 O HOH A 581 O HOH A 663 2.17 REMARK 500 O HOH A 520 O HOH A 531 2.17 REMARK 500 O HOH D 580 O HOH D 664 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG D 55 O HOH C 643 6565 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 VAL A 5 CB VAL A 5 CG1 -0.148 REMARK 500 ARG A 7 CB ARG A 7 CG -0.174 REMARK 500 GLU A 83 CB GLU A 83 CG -0.228 REMARK 500 GLU A 83 CG GLU A 83 CD 0.092 REMARK 500 ASP A 142 CB ASP A 142 CG -0.141 REMARK 500 ALA A 149 CA ALA A 149 CB 0.139 REMARK 500 GLU A 161 CD GLU A 161 OE1 -0.066 REMARK 500 GLU A 161 CD GLU A 161 OE2 -0.101 REMARK 500 GLN A 164 CB GLN A 164 CG -0.266 REMARK 500 GLU A 166 CB GLU A 166 CG -0.182 REMARK 500 GLU A 166 CG GLU A 166 CD -0.110 REMARK 500 GLY A 167 CA GLY A 167 C -0.099 REMARK 500 TYR A 174 CD1 TYR A 174 CE1 -0.123 REMARK 500 ARG A 236 CZ ARG A 236 NH1 -0.079 REMARK 500 ARG A 236 CZ ARG A 236 NH2 -0.090 REMARK 500 VAL B 5 CB VAL B 5 CG1 -0.131 REMARK 500 VAL B 5 CB VAL B 5 CG2 -0.152 REMARK 500 GLU B 83 CB GLU B 83 CG -0.209 REMARK 500 VAL B 99 CB VAL B 99 CG1 -0.157 REMARK 500 TYR B 135 CD1 TYR B 135 CE1 -0.095 REMARK 500 GLU B 170 CD GLU B 170 OE1 -0.144 REMARK 500 GLU B 170 CD GLU B 170 OE2 -0.099 REMARK 500 TYR B 174 CB TYR B 174 CG -0.147 REMARK 500 TYR B 174 CG TYR B 174 CD2 -0.090 REMARK 500 TYR B 174 CZ TYR B 174 CE2 -0.128 REMARK 500 TYR B 174 CE2 TYR B 174 CD2 -0.243 REMARK 500 GLU B 185 CB GLU B 185 CG -0.119 REMARK 500 VAL C 5 CB VAL C 5 CG1 -0.153 REMARK 500 VAL C 5 CB VAL C 5 CG2 -0.171 REMARK 500 ARG C 7 CZ ARG C 7 NH1 -0.088 REMARK 500 ARG C 55 CZ ARG C 55 NH1 -0.081 REMARK 500 GLU C 83 CB GLU C 83 CG -0.118 REMARK 500 VAL C 132 CB VAL C 132 CG2 -0.189 REMARK 500 GLY C 134 N GLY C 134 CA 0.229 REMARK 500 GLN C 145 CB GLN C 145 CG -0.176 REMARK 500 GLU C 166 CD GLU C 166 OE1 -0.069 REMARK 500 GLU C 170 CD GLU C 170 OE1 -0.080 REMARK 500 TYR C 174 CB TYR C 174 CG -0.121 REMARK 500 TYR C 174 CG TYR C 174 CD2 -0.084 REMARK 500 TYR C 174 CZ TYR C 174 CE2 -0.120 REMARK 500 TYR C 174 CE2 TYR C 174 CD2 -0.145 REMARK 500 ARG C 235 CD ARG C 235 NE -0.139 REMARK 500 ARG C 235 CZ ARG C 235 NH2 -0.086 REMARK 500 GLU C 242 CG GLU C 242 CD 0.093 REMARK 500 ARG C 262 CD ARG C 262 NE -0.126 REMARK 500 VAL D 5 CB VAL D 5 CG1 -0.183 REMARK 500 VAL D 5 CB VAL D 5 CG2 -0.259 REMARK 500 ARG D 7 CB ARG D 7 CG -0.169 REMARK 500 ARG D 7 CZ ARG D 7 NH2 -0.082 REMARK 500 SER D 24 CB SER D 24 OG 0.087 REMARK 500 REMARK 500 THIS ENTRY HAS 61 BOND DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SER A 43 N - CA - CB ANGL. DEV. = -9.2 DEGREES REMARK 500 ARG A 71 CG - CD - NE ANGL. DEV. = -13.4 DEGREES REMARK 500 ARG A 76 CD - NE - CZ ANGL. DEV. = 9.0 DEGREES REMARK 500 ARG A 76 NE - CZ - NH1 ANGL. DEV. = -9.6 DEGREES REMARK 500 ARG A 76 NE - CZ - NH2 ANGL. DEV. = 8.0 DEGREES REMARK 500 LEU A 137 CB - CG - CD2 ANGL. DEV. = 12.1 DEGREES REMARK 500 ASP A 142 CB - CG - OD1 ANGL. DEV. = -14.9 DEGREES REMARK 500 ASP A 142 CB - CG - OD2 ANGL. DEV. = 7.5 DEGREES REMARK 500 GLU A 161 OE1 - CD - OE2 ANGL. DEV. = -8.8 DEGREES REMARK 500 GLU A 166 CB - CA - C ANGL. DEV. = -22.8 DEGREES REMARK 500 GLU A 166 N - CA - CB ANGL. DEV. = -11.4 DEGREES REMARK 500 GLY A 167 C - N - CA ANGL. DEV. = -19.9 DEGREES REMARK 500 LEU A 179 CB - CG - CD2 ANGL. DEV. = 14.4 DEGREES REMARK 500 ARG A 180 NE - CZ - NH1 ANGL. DEV. = 8.4 DEGREES REMARK 500 ARG A 180 NE - CZ - NH2 ANGL. DEV. = -6.8 DEGREES REMARK 500 ARG A 236 NH1 - CZ - NH2 ANGL. DEV. = -8.7 DEGREES REMARK 500 ARG A 236 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG A 236 NE - CZ - NH2 ANGL. DEV. = 4.5 DEGREES REMARK 500 ASP A 267 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ILE A 292 CB - CG1 - CD1 ANGL. DEV. = -19.3 DEGREES REMARK 500 TYR A 361 CB - CG - CD2 ANGL. DEV. = -4.2 DEGREES REMARK 500 LYS A 363 CD - CE - NZ ANGL. DEV. = -31.2 DEGREES REMARK 500 ARG A 365 NE - CZ - NH1 ANGL. DEV. = 5.4 DEGREES REMARK 500 ARG A 365 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG B 7 NE - CZ - NH2 ANGL. DEV. = 4.8 DEGREES REMARK 500 ARG B 71 CA - CB - CG ANGL. DEV. = 17.8 DEGREES REMARK 500 ARG B 71 CB - CG - CD ANGL. DEV. = 19.5 DEGREES REMARK 500 ARG B 76 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 MET B 146 CG - SD - CE ANGL. DEV. = 10.5 DEGREES REMARK 500 GLU B 166 CB - CA - C ANGL. DEV. = -18.0 DEGREES REMARK 500 GLY B 167 C - N - CA ANGL. DEV. = -14.3 DEGREES REMARK 500 GLU B 170 OE1 - CD - OE2 ANGL. DEV. = -15.2 DEGREES REMARK 500 TYR B 174 CB - CG - CD2 ANGL. DEV. = -4.0 DEGREES REMARK 500 TYR B 174 CG - CD1 - CE1 ANGL. DEV. = -5.5 DEGREES REMARK 500 TYR B 174 CE1 - CZ - OH ANGL. DEV. = -16.8 DEGREES REMARK 500 ARG B 180 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG B 180 NE - CZ - NH2 ANGL. DEV. = -7.5 DEGREES REMARK 500 VAL B 265 CG1 - CB - CG2 ANGL. DEV. = 11.2 DEGREES REMARK 500 ILE B 292 CG1 - CB - CG2 ANGL. DEV. = -19.1 DEGREES REMARK 500 ASP B 332 CB - CG - OD2 ANGL. DEV. = 7.0 DEGREES REMARK 500 TYR B 361 CB - CG - CD2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG B 365 NE - CZ - NH1 ANGL. DEV. = 7.0 DEGREES REMARK 500 ARG B 365 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 ARG C 7 NE - CZ - NH2 ANGL. DEV. = 5.4 DEGREES REMARK 500 ARG C 98 NE - CZ - NH1 ANGL. DEV. = -7.7 DEGREES REMARK 500 ARG C 98 NE - CZ - NH2 ANGL. DEV. = 7.8 DEGREES REMARK 500 LYS C 133 O - C - N ANGL. DEV. = -13.2 DEGREES REMARK 500 GLY C 134 C - N - CA ANGL. DEV. = -29.7 DEGREES REMARK 500 LEU C 137 CB - CG - CD2 ANGL. DEV. = 14.2 DEGREES REMARK 500 MET C 146 CG - SD - CE ANGL. DEV. = 13.0 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 94 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 54 -130.78 56.52 REMARK 500 MET A 67 -52.81 -134.11 REMARK 500 GLU A 148 58.18 37.92 REMARK 500 ASN A 157 46.88 -143.93 REMARK 500 SER A 195 50.10 -143.41 REMARK 500 SER A 218 64.92 39.56 REMARK 500 ALA A 296 -71.66 -130.74 REMARK 500 PHE B 54 -123.97 56.42 REMARK 500 MET B 67 -47.93 -137.46 REMARK 500 LYS B 133 40.58 -98.16 REMARK 500 ASN B 157 42.18 -145.02 REMARK 500 GLU B 166 41.80 -97.82 REMARK 500 SER B 195 45.63 -143.07 REMARK 500 SER B 218 61.11 38.01 REMARK 500 ALA B 296 -69.41 -128.91 REMARK 500 PHE C 54 -126.02 55.05 REMARK 500 MET C 67 -52.54 -134.73 REMARK 500 LYS C 133 39.68 -91.82 REMARK 500 ASN C 157 46.31 -143.93 REMARK 500 GLU C 166 45.58 -102.08 REMARK 500 SER C 195 47.67 -142.27 REMARK 500 ALA C 296 -70.02 -135.52 REMARK 500 PHE D 54 -125.07 51.88 REMARK 500 MET D 67 -51.34 -139.41 REMARK 500 GLU D 148 59.02 36.23 REMARK 500 ASN D 157 46.03 -141.23 REMARK 500 SER D 195 46.72 -143.52 REMARK 500 SER D 218 64.11 37.49 REMARK 500 ALA D 296 -74.89 -129.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY B 134 TYR B 135 147.60 REMARK 500 GLU B 166 GLY B 167 -149.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FNR A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FNR B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FNR C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FNR D 401 DBREF 3VKJ A 1 368 UNP P61615 IDI2_SULSH 1 368 DBREF 3VKJ B 1 368 UNP P61615 IDI2_SULSH 1 368 DBREF 3VKJ C 1 368 UNP P61615 IDI2_SULSH 1 368 DBREF 3VKJ D 1 368 UNP P61615 IDI2_SULSH 1 368 SEQRES 1 A 368 MET PRO ASP ILE VAL ASN ARG LYS VAL GLU HIS VAL GLU SEQRES 2 A 368 ILE ALA ALA PHE GLU ASN VAL ASP GLY LEU SER SER SER SEQRES 3 A 368 THR PHE LEU ASN ASP VAL ILE LEU VAL HIS GLN GLY PHE SEQRES 4 A 368 PRO GLY ILE SER PHE SER GLU ILE ASN THR LYS THR LYS SEQRES 5 A 368 PHE PHE ARG LYS GLU ILE SER VAL PRO VAL MET VAL THR SEQRES 6 A 368 GLY MET THR GLY GLY ARG ASN GLU LEU GLY ARG ILE ASN SEQRES 7 A 368 LYS ILE ILE ALA GLU VAL ALA GLU LYS PHE GLY ILE PRO SEQRES 8 A 368 MET GLY VAL GLY SER GLN ARG VAL ALA ILE GLU LYS ALA SEQRES 9 A 368 GLU ALA ARG GLU SER PHE ALA ILE VAL ARG LYS VAL ALA SEQRES 10 A 368 PRO THR ILE PRO ILE ILE ALA ASN LEU GLY MET PRO GLN SEQRES 11 A 368 LEU VAL LYS GLY TYR GLY LEU LYS GLU PHE GLN ASP ALA SEQRES 12 A 368 ILE GLN MET ILE GLU ALA ASP ALA ILE ALA VAL HIS LEU SEQRES 13 A 368 ASN PRO ALA GLN GLU VAL PHE GLN PRO GLU GLY GLU PRO SEQRES 14 A 368 GLU TYR GLN ILE TYR ALA LEU GLU LYS LEU ARG ASP ILE SEQRES 15 A 368 SER LYS GLU LEU SER VAL PRO ILE ILE VAL LYS GLU SER SEQRES 16 A 368 GLY ASN GLY ILE SER MET GLU THR ALA LYS LEU LEU TYR SEQRES 17 A 368 SER TYR GLY ILE LYS ASN PHE ASP THR SER GLY GLN GLY SEQRES 18 A 368 GLY THR ASN TRP ILE ALA ILE GLU MET ILE ARG ASP ILE SEQRES 19 A 368 ARG ARG GLY ASN TRP LYS ALA GLU SER ALA LYS ASN PHE SEQRES 20 A 368 LEU ASP TRP GLY VAL PRO THR ALA ALA SER ILE MET GLU SEQRES 21 A 368 VAL ARG TYR SER VAL PRO ASP SER PHE LEU VAL GLY SER SEQRES 22 A 368 GLY GLY ILE ARG SER GLY LEU ASP ALA ALA LYS ALA ILE SEQRES 23 A 368 ALA LEU GLY ALA ASP ILE ALA GLY MET ALA LEU PRO VAL SEQRES 24 A 368 LEU LYS SER ALA ILE GLU GLY LYS GLU SER LEU GLU GLN SEQRES 25 A 368 PHE PHE ARG LYS ILE ILE PHE GLU LEU LYS ALA ALA MET SEQRES 26 A 368 MET LEU THR GLY SER LYS ASP VAL ASP ALA LEU LYS LYS SEQRES 27 A 368 THR SER ILE VAL ILE LEU GLY LYS LEU LYS GLU TRP ALA SEQRES 28 A 368 GLU TYR ARG GLY ILE ASN LEU SER ILE TYR GLU LYS VAL SEQRES 29 A 368 ARG LYS ARG GLU SEQRES 1 B 368 MET PRO ASP ILE VAL ASN ARG LYS VAL GLU HIS VAL GLU SEQRES 2 B 368 ILE ALA ALA PHE GLU ASN VAL ASP GLY LEU SER SER SER SEQRES 3 B 368 THR PHE LEU ASN ASP VAL ILE LEU VAL HIS GLN GLY PHE SEQRES 4 B 368 PRO GLY ILE SER PHE SER GLU ILE ASN THR LYS THR LYS SEQRES 5 B 368 PHE PHE ARG LYS GLU ILE SER VAL PRO VAL MET VAL THR SEQRES 6 B 368 GLY MET THR GLY GLY ARG ASN GLU LEU GLY ARG ILE ASN SEQRES 7 B 368 LYS ILE ILE ALA GLU VAL ALA GLU LYS PHE GLY ILE PRO SEQRES 8 B 368 MET GLY VAL GLY SER GLN ARG VAL ALA ILE GLU LYS ALA SEQRES 9 B 368 GLU ALA ARG GLU SER PHE ALA ILE VAL ARG LYS VAL ALA SEQRES 10 B 368 PRO THR ILE PRO ILE ILE ALA ASN LEU GLY MET PRO GLN SEQRES 11 B 368 LEU VAL LYS GLY TYR GLY LEU LYS GLU PHE GLN ASP ALA SEQRES 12 B 368 ILE GLN MET ILE GLU ALA ASP ALA ILE ALA VAL HIS LEU SEQRES 13 B 368 ASN PRO ALA GLN GLU VAL PHE GLN PRO GLU GLY GLU PRO SEQRES 14 B 368 GLU TYR GLN ILE TYR ALA LEU GLU LYS LEU ARG ASP ILE SEQRES 15 B 368 SER LYS GLU LEU SER VAL PRO ILE ILE VAL LYS GLU SER SEQRES 16 B 368 GLY ASN GLY ILE SER MET GLU THR ALA LYS LEU LEU TYR SEQRES 17 B 368 SER TYR GLY ILE LYS ASN PHE ASP THR SER GLY GLN GLY SEQRES 18 B 368 GLY THR ASN TRP ILE ALA ILE GLU MET ILE ARG ASP ILE SEQRES 19 B 368 ARG ARG GLY ASN TRP LYS ALA GLU SER ALA LYS ASN PHE SEQRES 20 B 368 LEU ASP TRP GLY VAL PRO THR ALA ALA SER ILE MET GLU SEQRES 21 B 368 VAL ARG TYR SER VAL PRO ASP SER PHE LEU VAL GLY SER SEQRES 22 B 368 GLY GLY ILE ARG SER GLY LEU ASP ALA ALA LYS ALA ILE SEQRES 23 B 368 ALA LEU GLY ALA ASP ILE ALA GLY MET ALA LEU PRO VAL SEQRES 24 B 368 LEU LYS SER ALA ILE GLU GLY LYS GLU SER LEU GLU GLN SEQRES 25 B 368 PHE PHE ARG LYS ILE ILE PHE GLU LEU LYS ALA ALA MET SEQRES 26 B 368 MET LEU THR GLY SER LYS ASP VAL ASP ALA LEU LYS LYS SEQRES 27 B 368 THR SER ILE VAL ILE LEU GLY LYS LEU LYS GLU TRP ALA SEQRES 28 B 368 GLU TYR ARG GLY ILE ASN LEU SER ILE TYR GLU LYS VAL SEQRES 29 B 368 ARG LYS ARG GLU SEQRES 1 C 368 MET PRO ASP ILE VAL ASN ARG LYS VAL GLU HIS VAL GLU SEQRES 2 C 368 ILE ALA ALA PHE GLU ASN VAL ASP GLY LEU SER SER SER SEQRES 3 C 368 THR PHE LEU ASN ASP VAL ILE LEU VAL HIS GLN GLY PHE SEQRES 4 C 368 PRO GLY ILE SER PHE SER GLU ILE ASN THR LYS THR LYS SEQRES 5 C 368 PHE PHE ARG LYS GLU ILE SER VAL PRO VAL MET VAL THR SEQRES 6 C 368 GLY MET THR GLY GLY ARG ASN GLU LEU GLY ARG ILE ASN SEQRES 7 C 368 LYS ILE ILE ALA GLU VAL ALA GLU LYS PHE GLY ILE PRO SEQRES 8 C 368 MET GLY VAL GLY SER GLN ARG VAL ALA ILE GLU LYS ALA SEQRES 9 C 368 GLU ALA ARG GLU SER PHE ALA ILE VAL ARG LYS VAL ALA SEQRES 10 C 368 PRO THR ILE PRO ILE ILE ALA ASN LEU GLY MET PRO GLN SEQRES 11 C 368 LEU VAL LYS GLY TYR GLY LEU LYS GLU PHE GLN ASP ALA SEQRES 12 C 368 ILE GLN MET ILE GLU ALA ASP ALA ILE ALA VAL HIS LEU SEQRES 13 C 368 ASN PRO ALA GLN GLU VAL PHE GLN PRO GLU GLY GLU PRO SEQRES 14 C 368 GLU TYR GLN ILE TYR ALA LEU GLU LYS LEU ARG ASP ILE SEQRES 15 C 368 SER LYS GLU LEU SER VAL PRO ILE ILE VAL LYS GLU SER SEQRES 16 C 368 GLY ASN GLY ILE SER MET GLU THR ALA LYS LEU LEU TYR SEQRES 17 C 368 SER TYR GLY ILE LYS ASN PHE ASP THR SER GLY GLN GLY SEQRES 18 C 368 GLY THR ASN TRP ILE ALA ILE GLU MET ILE ARG ASP ILE SEQRES 19 C 368 ARG ARG GLY ASN TRP LYS ALA GLU SER ALA LYS ASN PHE SEQRES 20 C 368 LEU ASP TRP GLY VAL PRO THR ALA ALA SER ILE MET GLU SEQRES 21 C 368 VAL ARG TYR SER VAL PRO ASP SER PHE LEU VAL GLY SER SEQRES 22 C 368 GLY GLY ILE ARG SER GLY LEU ASP ALA ALA LYS ALA ILE SEQRES 23 C 368 ALA LEU GLY ALA ASP ILE ALA GLY MET ALA LEU PRO VAL SEQRES 24 C 368 LEU LYS SER ALA ILE GLU GLY LYS GLU SER LEU GLU GLN SEQRES 25 C 368 PHE PHE ARG LYS ILE ILE PHE GLU LEU LYS ALA ALA MET SEQRES 26 C 368 MET LEU THR GLY SER LYS ASP VAL ASP ALA LEU LYS LYS SEQRES 27 C 368 THR SER ILE VAL ILE LEU GLY LYS LEU LYS GLU TRP ALA SEQRES 28 C 368 GLU TYR ARG GLY ILE ASN LEU SER ILE TYR GLU LYS VAL SEQRES 29 C 368 ARG LYS ARG GLU SEQRES 1 D 368 MET PRO ASP ILE VAL ASN ARG LYS VAL GLU HIS VAL GLU SEQRES 2 D 368 ILE ALA ALA PHE GLU ASN VAL ASP GLY LEU SER SER SER SEQRES 3 D 368 THR PHE LEU ASN ASP VAL ILE LEU VAL HIS GLN GLY PHE SEQRES 4 D 368 PRO GLY ILE SER PHE SER GLU ILE ASN THR LYS THR LYS SEQRES 5 D 368 PHE PHE ARG LYS GLU ILE SER VAL PRO VAL MET VAL THR SEQRES 6 D 368 GLY MET THR GLY GLY ARG ASN GLU LEU GLY ARG ILE ASN SEQRES 7 D 368 LYS ILE ILE ALA GLU VAL ALA GLU LYS PHE GLY ILE PRO SEQRES 8 D 368 MET GLY VAL GLY SER GLN ARG VAL ALA ILE GLU LYS ALA SEQRES 9 D 368 GLU ALA ARG GLU SER PHE ALA ILE VAL ARG LYS VAL ALA SEQRES 10 D 368 PRO THR ILE PRO ILE ILE ALA ASN LEU GLY MET PRO GLN SEQRES 11 D 368 LEU VAL LYS GLY TYR GLY LEU LYS GLU PHE GLN ASP ALA SEQRES 12 D 368 ILE GLN MET ILE GLU ALA ASP ALA ILE ALA VAL HIS LEU SEQRES 13 D 368 ASN PRO ALA GLN GLU VAL PHE GLN PRO GLU GLY GLU PRO SEQRES 14 D 368 GLU TYR GLN ILE TYR ALA LEU GLU LYS LEU ARG ASP ILE SEQRES 15 D 368 SER LYS GLU LEU SER VAL PRO ILE ILE VAL LYS GLU SER SEQRES 16 D 368 GLY ASN GLY ILE SER MET GLU THR ALA LYS LEU LEU TYR SEQRES 17 D 368 SER TYR GLY ILE LYS ASN PHE ASP THR SER GLY GLN GLY SEQRES 18 D 368 GLY THR ASN TRP ILE ALA ILE GLU MET ILE ARG ASP ILE SEQRES 19 D 368 ARG ARG GLY ASN TRP LYS ALA GLU SER ALA LYS ASN PHE SEQRES 20 D 368 LEU ASP TRP GLY VAL PRO THR ALA ALA SER ILE MET GLU SEQRES 21 D 368 VAL ARG TYR SER VAL PRO ASP SER PHE LEU VAL GLY SER SEQRES 22 D 368 GLY GLY ILE ARG SER GLY LEU ASP ALA ALA LYS ALA ILE SEQRES 23 D 368 ALA LEU GLY ALA ASP ILE ALA GLY MET ALA LEU PRO VAL SEQRES 24 D 368 LEU LYS SER ALA ILE GLU GLY LYS GLU SER LEU GLU GLN SEQRES 25 D 368 PHE PHE ARG LYS ILE ILE PHE GLU LEU LYS ALA ALA MET SEQRES 26 D 368 MET LEU THR GLY SER LYS ASP VAL ASP ALA LEU LYS LYS SEQRES 27 D 368 THR SER ILE VAL ILE LEU GLY LYS LEU LYS GLU TRP ALA SEQRES 28 D 368 GLU TYR ARG GLY ILE ASN LEU SER ILE TYR GLU LYS VAL SEQRES 29 D 368 ARG LYS ARG GLU HET FNR A 401 31 HET FNR B 401 31 HET FNR C 401 31 HET FNR D 401 31 HETNAM FNR 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H- HETNAM 2 FNR BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D- HETNAM 3 FNR RIBITOL HETSYN FNR TWO ELECTRON REDUCED FLAVIN MONONUCLEOTIDE FORMUL 5 FNR 4(C17 H23 N4 O9 P) FORMUL 9 HOH *724(H2 O) HELIX 1 1 VAL A 9 GLU A 18 1 10 HELIX 2 2 PHE A 28 ASN A 30 5 3 HELIX 3 3 SER A 43 ILE A 47 5 5 HELIX 4 4 ARG A 71 GLY A 89 1 19 HELIX 5 5 GLN A 97 LYS A 103 1 7 HELIX 6 6 ALA A 104 ALA A 106 5 3 HELIX 7 7 ARG A 107 ALA A 117 1 11 HELIX 8 8 PRO A 129 LYS A 133 5 5 HELIX 9 9 GLY A 136 ILE A 147 1 12 HELIX 10 10 ASN A 157 GLN A 164 1 8 HELIX 11 11 ILE A 173 LYS A 184 1 12 HELIX 12 12 SER A 200 TYR A 210 1 11 HELIX 13 13 ASN A 224 ARG A 236 1 13 HELIX 14 14 TRP A 239 PHE A 247 1 9 HELIX 15 15 PRO A 253 VAL A 265 1 13 HELIX 16 16 SER A 278 GLY A 289 1 12 HELIX 17 17 ALA A 296 GLY A 306 1 11 HELIX 18 18 GLY A 306 THR A 328 1 23 HELIX 19 19 ASP A 332 LYS A 338 1 7 HELIX 20 20 LEU A 344 GLY A 355 1 12 HELIX 21 21 ASN A 357 LYS A 366 1 10 HELIX 22 22 VAL B 9 GLU B 18 1 10 HELIX 23 23 PHE B 28 ASN B 30 5 3 HELIX 24 24 SER B 43 ILE B 47 5 5 HELIX 25 25 ARG B 71 GLY B 89 1 19 HELIX 26 26 GLN B 97 LYS B 103 1 7 HELIX 27 27 ALA B 104 ALA B 106 5 3 HELIX 28 28 ARG B 107 ALA B 117 1 11 HELIX 29 29 MET B 128 LYS B 133 1 6 HELIX 30 30 GLY B 136 ILE B 147 1 12 HELIX 31 31 ASN B 157 GLN B 164 1 8 HELIX 32 32 ILE B 173 LYS B 184 1 12 HELIX 33 33 SER B 200 TYR B 210 1 11 HELIX 34 34 ASN B 224 ARG B 236 1 13 HELIX 35 35 TRP B 239 PHE B 247 1 9 HELIX 36 36 PRO B 253 VAL B 265 1 13 HELIX 37 37 SER B 278 GLY B 289 1 12 HELIX 38 38 ALA B 296 GLY B 306 1 11 HELIX 39 39 GLY B 306 THR B 328 1 23 HELIX 40 40 ASP B 332 LYS B 338 1 7 HELIX 41 41 LEU B 344 ARG B 354 1 11 HELIX 42 42 ASN B 357 LYS B 366 1 10 HELIX 43 43 VAL C 9 GLU C 18 1 10 HELIX 44 44 PHE C 28 ASN C 30 5 3 HELIX 45 45 SER C 43 ILE C 47 5 5 HELIX 46 46 ARG C 71 GLY C 89 1 19 HELIX 47 47 GLN C 97 LYS C 103 1 7 HELIX 48 48 ALA C 104 ALA C 106 5 3 HELIX 49 49 ARG C 107 ALA C 117 1 11 HELIX 50 50 MET C 128 LYS C 133 1 6 HELIX 51 51 GLY C 136 ILE C 147 1 12 HELIX 52 52 ASN C 157 GLN C 164 1 8 HELIX 53 53 ILE C 173 LYS C 184 1 12 HELIX 54 54 SER C 200 TYR C 210 1 11 HELIX 55 55 ASN C 224 ARG C 236 1 13 HELIX 56 56 TRP C 239 PHE C 247 1 9 HELIX 57 57 PRO C 253 VAL C 265 1 13 HELIX 58 58 SER C 278 GLY C 289 1 12 HELIX 59 59 ALA C 296 GLY C 306 1 11 HELIX 60 60 GLY C 306 THR C 328 1 23 HELIX 61 61 ASP C 332 LYS C 338 1 7 HELIX 62 62 LEU C 344 ARG C 354 1 11 HELIX 63 63 ASN C 357 LYS C 366 1 10 HELIX 64 64 VAL D 9 GLU D 18 1 10 HELIX 65 65 PHE D 28 ASN D 30 5 3 HELIX 66 66 SER D 43 ILE D 47 5 5 HELIX 67 67 ARG D 71 GLY D 89 1 19 HELIX 68 68 GLN D 97 LYS D 103 1 7 HELIX 69 69 ALA D 104 ALA D 106 5 3 HELIX 70 70 ARG D 107 ALA D 117 1 11 HELIX 71 71 PRO D 129 LYS D 133 5 5 HELIX 72 72 GLY D 136 ILE D 147 1 12 HELIX 73 73 ASN D 157 GLN D 164 1 8 HELIX 74 74 ILE D 173 LYS D 184 1 12 HELIX 75 75 SER D 200 TYR D 210 1 11 HELIX 76 76 ASN D 224 ARG D 236 1 13 HELIX 77 77 TRP D 239 PHE D 247 1 9 HELIX 78 78 PRO D 253 VAL D 265 1 13 HELIX 79 79 SER D 278 GLY D 289 1 12 HELIX 80 80 ALA D 296 GLY D 306 1 11 HELIX 81 81 GLY D 306 THR D 328 1 23 HELIX 82 82 ASP D 332 LYS D 338 1 7 HELIX 83 83 LEU D 344 ARG D 354 1 11 HELIX 84 84 ASN D 357 LYS D 366 1 10 SHEET 1 A 2 VAL A 32 LEU A 34 0 SHEET 2 A 2 ILE A 341 ILE A 343 -1 O VAL A 342 N ILE A 33 SHEET 1 B 2 THR A 51 PHE A 53 0 SHEET 2 B 2 LYS A 56 ILE A 58 -1 O ILE A 58 N THR A 51 SHEET 1 C 9 VAL A 62 VAL A 64 0 SHEET 2 C 9 MET A 92 GLY A 93 1 O GLY A 93 N VAL A 64 SHEET 3 C 9 ILE A 122 GLY A 127 1 O ILE A 123 N MET A 92 SHEET 4 C 9 ALA A 151 HIS A 155 1 O ALA A 151 N ALA A 124 SHEET 5 C 9 ILE A 190 LYS A 193 1 O ILE A 191 N VAL A 154 SHEET 6 C 9 ASN A 214 ASP A 216 1 O ASN A 214 N VAL A 192 SHEET 7 C 9 PHE A 269 SER A 273 1 O VAL A 271 N PHE A 215 SHEET 8 C 9 ILE A 292 MET A 295 1 O ILE A 292 N GLY A 272 SHEET 9 C 9 VAL A 62 VAL A 64 1 N MET A 63 O ALA A 293 SHEET 1 D 2 VAL B 32 LEU B 34 0 SHEET 2 D 2 ILE B 341 ILE B 343 -1 O VAL B 342 N ILE B 33 SHEET 1 E 2 THR B 51 PHE B 53 0 SHEET 2 E 2 LYS B 56 ILE B 58 -1 O LYS B 56 N PHE B 53 SHEET 1 F 9 VAL B 62 VAL B 64 0 SHEET 2 F 9 MET B 92 GLY B 93 1 O GLY B 93 N VAL B 64 SHEET 3 F 9 ILE B 122 GLY B 127 1 O ILE B 123 N MET B 92 SHEET 4 F 9 ALA B 151 HIS B 155 1 O ALA B 153 N ALA B 124 SHEET 5 F 9 ILE B 190 LYS B 193 1 O ILE B 191 N ILE B 152 SHEET 6 F 9 ASN B 214 ASP B 216 1 O ASN B 214 N VAL B 192 SHEET 7 F 9 PHE B 269 GLY B 272 1 O VAL B 271 N PHE B 215 SHEET 8 F 9 ILE B 292 MET B 295 1 O ILE B 292 N GLY B 272 SHEET 9 F 9 VAL B 62 VAL B 64 1 N MET B 63 O ALA B 293 SHEET 1 G 2 VAL C 32 LEU C 34 0 SHEET 2 G 2 ILE C 341 ILE C 343 -1 O VAL C 342 N ILE C 33 SHEET 1 H 2 THR C 51 PHE C 53 0 SHEET 2 H 2 LYS C 56 ILE C 58 -1 O ILE C 58 N THR C 51 SHEET 1 I 9 VAL C 62 VAL C 64 0 SHEET 2 I 9 MET C 92 GLY C 93 1 O GLY C 93 N VAL C 64 SHEET 3 I 9 ILE C 122 GLY C 127 1 O ILE C 123 N MET C 92 SHEET 4 I 9 ALA C 151 HIS C 155 1 O ALA C 153 N ALA C 124 SHEET 5 I 9 ILE C 190 LYS C 193 1 O ILE C 191 N ILE C 152 SHEET 6 I 9 ASN C 214 ASP C 216 1 O ASN C 214 N VAL C 192 SHEET 7 I 9 PHE C 269 SER C 273 1 O VAL C 271 N PHE C 215 SHEET 8 I 9 ILE C 292 MET C 295 1 O ILE C 292 N GLY C 272 SHEET 9 I 9 VAL C 62 VAL C 64 1 N MET C 63 O ALA C 293 SHEET 1 J 2 VAL D 32 LEU D 34 0 SHEET 2 J 2 ILE D 341 ILE D 343 -1 O VAL D 342 N ILE D 33 SHEET 1 K 2 THR D 51 PHE D 53 0 SHEET 2 K 2 LYS D 56 ILE D 58 -1 O LYS D 56 N PHE D 53 SHEET 1 L 9 VAL D 62 VAL D 64 0 SHEET 2 L 9 MET D 92 GLY D 93 1 O GLY D 93 N VAL D 64 SHEET 3 L 9 ILE D 122 GLY D 127 1 O ILE D 123 N MET D 92 SHEET 4 L 9 ALA D 151 HIS D 155 1 O ALA D 153 N ALA D 124 SHEET 5 L 9 ILE D 190 LYS D 193 1 O ILE D 191 N VAL D 154 SHEET 6 L 9 ASN D 214 ASP D 216 1 O ASN D 214 N VAL D 192 SHEET 7 L 9 PHE D 269 SER D 273 1 O VAL D 271 N PHE D 215 SHEET 8 L 9 ILE D 292 MET D 295 1 O ILE D 292 N GLY D 272 SHEET 9 L 9 VAL D 62 VAL D 64 1 N MET D 63 O ALA D 293 SITE 1 AC1 20 THR A 65 GLY A 66 MET A 67 GLY A 95 SITE 2 AC1 20 SER A 96 ASN A 125 HIS A 155 LYS A 193 SITE 3 AC1 20 SER A 218 GLY A 222 THR A 223 TRP A 225 SITE 4 AC1 20 GLY A 275 ARG A 277 ALA A 296 LEU A 297 SITE 5 AC1 20 HOH A 505 HOH A 525 HOH A 577 HOH A 587 SITE 1 AC2 22 THR B 65 GLY B 66 MET B 67 GLY B 95 SITE 2 AC2 22 SER B 96 ASN B 125 HIS B 155 LYS B 193 SITE 3 AC2 22 SER B 218 GLY B 222 THR B 223 TRP B 225 SITE 4 AC2 22 GLY B 275 ARG B 277 MET B 295 ALA B 296 SITE 5 AC2 22 LEU B 297 HOH B 501 HOH B 508 HOH B 511 SITE 6 AC2 22 HOH B 569 HOH B 629 SITE 1 AC3 22 THR C 65 GLY C 66 MET C 67 GLY C 95 SITE 2 AC3 22 SER C 96 ASN C 125 HIS C 155 LYS C 193 SITE 3 AC3 22 SER C 218 GLY C 222 THR C 223 TRP C 225 SITE 4 AC3 22 GLY C 275 ARG C 277 MET C 295 ALA C 296 SITE 5 AC3 22 LEU C 297 HOH C 501 HOH C 502 HOH C 526 SITE 6 AC3 22 HOH C 568 HOH C 697 SITE 1 AC4 21 THR D 65 GLY D 66 MET D 67 GLY D 95 SITE 2 AC4 21 SER D 96 ASN D 125 HIS D 155 LYS D 193 SITE 3 AC4 21 SER D 218 GLY D 222 THR D 223 TRP D 225 SITE 4 AC4 21 GLY D 275 ARG D 277 ALA D 296 LEU D 297 SITE 5 AC4 21 HOH D 502 HOH D 503 HOH D 507 HOH D 654 SITE 6 AC4 21 HOH D 672 CRYST1 100.841 100.841 336.651 90.00 90.00 90.00 P 43 21 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009917 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009917 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002970 0.00000