data_3VMX # _entry.id 3VMX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3VMX pdb_00003vmx 10.2210/pdb3vmx/pdb RCSB RCSB095245 ? ? WWPDB D_1000095245 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-05-30 2 'Structure model' 1 1 2013-06-26 3 'Structure model' 1 2 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3VMX _pdbx_database_status.recvd_initial_deposition_date 2011-12-19 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3VMY . unspecified PDB 3VMZ . unspecified PDB 3VN0 . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fujiwara, Y.' 1 'Takeshita, K.' 2 'Kobayashi, M.' 3 'Okamura, Y.' 4 'Nakagawa, A.' 5 # _citation.id primary _citation.title 'The cytoplasmic coiled-coil mediates cooperative gating temperature sensitivity in the voltage-gated H(+) channel Hv1' _citation.journal_abbrev 'Nat Commun' _citation.journal_volume 3 _citation.page_first 816 _citation.page_last 816 _citation.year 2012 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 2041-1723 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22569364 _citation.pdbx_database_id_DOI 10.1038/ncomms1823 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fujiwara, Y.' 1 ? primary 'Kurokawa, T.' 2 ? primary 'Takeshita, K.' 3 ? primary 'Kobayashi, M.' 4 ? primary 'Okochi, Y.' 5 ? primary 'Nakagawa, A.' 6 ? primary 'Okamura, Y.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Voltage-gated hydrogen channel 1' 5598.501 4 ? ? 'C-TERMINAL DOMAIN (UNP RESIDUES 220-269)' ? 2 water nat water 18.015 222 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Hydrogen voltage-gated channel 1, HV1, Voltage sensor domain-only protein, mVSOP' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GSERQILRLKQINIQLATKIQHLEFSCSEKEQEIERLNKLLKQNGLLG _entity_poly.pdbx_seq_one_letter_code_can GSERQILRLKQINIQLATKIQHLEFSCSEKEQEIERLNKLLKQNGLLG _entity_poly.pdbx_strand_id A,C,B,D _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 GLU n 1 4 ARG n 1 5 GLN n 1 6 ILE n 1 7 LEU n 1 8 ARG n 1 9 LEU n 1 10 LYS n 1 11 GLN n 1 12 ILE n 1 13 ASN n 1 14 ILE n 1 15 GLN n 1 16 LEU n 1 17 ALA n 1 18 THR n 1 19 LYS n 1 20 ILE n 1 21 GLN n 1 22 HIS n 1 23 LEU n 1 24 GLU n 1 25 PHE n 1 26 SER n 1 27 CYS n 1 28 SER n 1 29 GLU n 1 30 LYS n 1 31 GLU n 1 32 GLN n 1 33 GLU n 1 34 ILE n 1 35 GLU n 1 36 ARG n 1 37 LEU n 1 38 ASN n 1 39 LYS n 1 40 LEU n 1 41 LEU n 1 42 LYS n 1 43 GLN n 1 44 ASN n 1 45 GLY n 1 46 LEU n 1 47 LEU n 1 48 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Bts, Hvcn1, Vsop' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21PLYSS _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET28HMT _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 219 219 GLY GLY A . n A 1 2 SER 2 220 220 SER SER A . n A 1 3 GLU 3 221 221 GLU GLU A . n A 1 4 ARG 4 222 222 ARG ARG A . n A 1 5 GLN 5 223 223 GLN GLN A . n A 1 6 ILE 6 224 224 ILE ILE A . n A 1 7 LEU 7 225 225 LEU LEU A . n A 1 8 ARG 8 226 226 ARG ARG A . n A 1 9 LEU 9 227 227 LEU LEU A . n A 1 10 LYS 10 228 228 LYS LYS A . n A 1 11 GLN 11 229 229 GLN GLN A . n A 1 12 ILE 12 230 230 ILE ILE A . n A 1 13 ASN 13 231 231 ASN ASN A . n A 1 14 ILE 14 232 232 ILE ILE A . n A 1 15 GLN 15 233 233 GLN GLN A . n A 1 16 LEU 16 234 234 LEU LEU A . n A 1 17 ALA 17 235 235 ALA ALA A . n A 1 18 THR 18 236 236 THR THR A . n A 1 19 LYS 19 237 237 LYS LYS A . n A 1 20 ILE 20 238 238 ILE ILE A . n A 1 21 GLN 21 239 239 GLN GLN A . n A 1 22 HIS 22 240 240 HIS HIS A . n A 1 23 LEU 23 241 241 LEU LEU A . n A 1 24 GLU 24 242 242 GLU GLU A . n A 1 25 PHE 25 243 243 PHE PHE A . n A 1 26 SER 26 244 244 SER SER A . n A 1 27 CYS 27 245 245 CYS CYS A . n A 1 28 SER 28 246 246 SER SER A . n A 1 29 GLU 29 247 247 GLU GLU A . n A 1 30 LYS 30 248 248 LYS LYS A . n A 1 31 GLU 31 249 249 GLU GLU A . n A 1 32 GLN 32 250 250 GLN GLN A . n A 1 33 GLU 33 251 251 GLU GLU A . n A 1 34 ILE 34 252 252 ILE ILE A . n A 1 35 GLU 35 253 253 GLU GLU A . n A 1 36 ARG 36 254 254 ARG ARG A . n A 1 37 LEU 37 255 255 LEU LEU A . n A 1 38 ASN 38 256 256 ASN ASN A . n A 1 39 LYS 39 257 257 LYS LYS A . n A 1 40 LEU 40 258 258 LEU LEU A . n A 1 41 LEU 41 259 259 LEU LEU A . n A 1 42 LYS 42 260 260 LYS LYS A . n A 1 43 GLN 43 261 261 GLN GLN A . n A 1 44 ASN 44 262 262 ASN ASN A . n A 1 45 GLY 45 263 263 GLY GLY A . n A 1 46 LEU 46 264 264 LEU LEU A . n A 1 47 LEU 47 265 265 LEU LEU A . n A 1 48 GLY 48 266 266 GLY GLY A . n B 1 1 GLY 1 219 219 GLY GLY C . n B 1 2 SER 2 220 220 SER SER C . n B 1 3 GLU 3 221 221 GLU GLU C . n B 1 4 ARG 4 222 222 ARG ARG C . n B 1 5 GLN 5 223 223 GLN GLN C . n B 1 6 ILE 6 224 224 ILE ILE C . n B 1 7 LEU 7 225 225 LEU LEU C . n B 1 8 ARG 8 226 226 ARG ARG C . n B 1 9 LEU 9 227 227 LEU LEU C . n B 1 10 LYS 10 228 228 LYS LYS C . n B 1 11 GLN 11 229 229 GLN GLN C . n B 1 12 ILE 12 230 230 ILE ILE C . n B 1 13 ASN 13 231 231 ASN ASN C . n B 1 14 ILE 14 232 232 ILE ILE C . n B 1 15 GLN 15 233 233 GLN GLN C . n B 1 16 LEU 16 234 234 LEU LEU C . n B 1 17 ALA 17 235 235 ALA ALA C . n B 1 18 THR 18 236 236 THR THR C . n B 1 19 LYS 19 237 237 LYS LYS C . n B 1 20 ILE 20 238 238 ILE ILE C . n B 1 21 GLN 21 239 239 GLN GLN C . n B 1 22 HIS 22 240 240 HIS HIS C . n B 1 23 LEU 23 241 241 LEU LEU C . n B 1 24 GLU 24 242 242 GLU GLU C . n B 1 25 PHE 25 243 243 PHE PHE C . n B 1 26 SER 26 244 244 SER SER C . n B 1 27 CYS 27 245 245 CYS CYS C . n B 1 28 SER 28 246 246 SER SER C . n B 1 29 GLU 29 247 247 GLU GLU C . n B 1 30 LYS 30 248 248 LYS LYS C . n B 1 31 GLU 31 249 249 GLU GLU C . n B 1 32 GLN 32 250 250 GLN GLN C . n B 1 33 GLU 33 251 251 GLU GLU C . n B 1 34 ILE 34 252 252 ILE ILE C . n B 1 35 GLU 35 253 253 GLU GLU C . n B 1 36 ARG 36 254 254 ARG ARG C . n B 1 37 LEU 37 255 255 LEU LEU C . n B 1 38 ASN 38 256 256 ASN ASN C . n B 1 39 LYS 39 257 257 LYS LYS C . n B 1 40 LEU 40 258 258 LEU LEU C . n B 1 41 LEU 41 259 259 LEU LEU C . n B 1 42 LYS 42 260 260 LYS LYS C . n B 1 43 GLN 43 261 261 GLN GLN C . n B 1 44 ASN 44 262 262 ASN ASN C . n B 1 45 GLY 45 263 263 GLY GLY C . n B 1 46 LEU 46 264 264 LEU LEU C . n B 1 47 LEU 47 265 265 LEU LEU C . n B 1 48 GLY 48 266 266 GLY GLY C . n C 1 1 GLY 1 219 219 GLY GLY B . n C 1 2 SER 2 220 220 SER SER B . n C 1 3 GLU 3 221 221 GLU GLU B . n C 1 4 ARG 4 222 222 ARG ARG B . n C 1 5 GLN 5 223 223 GLN GLN B . n C 1 6 ILE 6 224 224 ILE ILE B . n C 1 7 LEU 7 225 225 LEU LEU B . n C 1 8 ARG 8 226 226 ARG ARG B . n C 1 9 LEU 9 227 227 LEU LEU B . n C 1 10 LYS 10 228 228 LYS LYS B . n C 1 11 GLN 11 229 229 GLN GLN B . n C 1 12 ILE 12 230 230 ILE ILE B . n C 1 13 ASN 13 231 231 ASN ASN B . n C 1 14 ILE 14 232 232 ILE ILE B . n C 1 15 GLN 15 233 233 GLN GLN B . n C 1 16 LEU 16 234 234 LEU LEU B . n C 1 17 ALA 17 235 235 ALA ALA B . n C 1 18 THR 18 236 236 THR THR B . n C 1 19 LYS 19 237 237 LYS LYS B . n C 1 20 ILE 20 238 238 ILE ILE B . n C 1 21 GLN 21 239 239 GLN GLN B . n C 1 22 HIS 22 240 240 HIS HIS B . n C 1 23 LEU 23 241 241 LEU LEU B . n C 1 24 GLU 24 242 242 GLU GLU B . n C 1 25 PHE 25 243 243 PHE PHE B . n C 1 26 SER 26 244 244 SER SER B . n C 1 27 CYS 27 245 245 CYS CYS B . n C 1 28 SER 28 246 246 SER SER B . n C 1 29 GLU 29 247 247 GLU GLU B . n C 1 30 LYS 30 248 248 LYS LYS B . n C 1 31 GLU 31 249 249 GLU GLU B . n C 1 32 GLN 32 250 250 GLN GLN B . n C 1 33 GLU 33 251 251 GLU GLU B . n C 1 34 ILE 34 252 252 ILE ILE B . n C 1 35 GLU 35 253 253 GLU GLU B . n C 1 36 ARG 36 254 254 ARG ARG B . n C 1 37 LEU 37 255 255 LEU LEU B . n C 1 38 ASN 38 256 256 ASN ASN B . n C 1 39 LYS 39 257 257 LYS LYS B . n C 1 40 LEU 40 258 258 LEU LEU B . n C 1 41 LEU 41 259 259 LEU LEU B . n C 1 42 LYS 42 260 260 LYS LYS B . n C 1 43 GLN 43 261 261 GLN GLN B . n C 1 44 ASN 44 262 262 ASN ASN B . n C 1 45 GLY 45 263 263 GLY GLY B . n C 1 46 LEU 46 264 264 LEU LEU B . n C 1 47 LEU 47 265 265 LEU LEU B . n C 1 48 GLY 48 266 266 GLY GLY B . n D 1 1 GLY 1 219 219 GLY GLY D . n D 1 2 SER 2 220 220 SER SER D . n D 1 3 GLU 3 221 221 GLU GLU D . n D 1 4 ARG 4 222 222 ARG ARG D . n D 1 5 GLN 5 223 223 GLN GLN D . n D 1 6 ILE 6 224 224 ILE ILE D . n D 1 7 LEU 7 225 225 LEU LEU D . n D 1 8 ARG 8 226 226 ARG ARG D . n D 1 9 LEU 9 227 227 LEU LEU D . n D 1 10 LYS 10 228 228 LYS LYS D . n D 1 11 GLN 11 229 229 GLN GLN D . n D 1 12 ILE 12 230 230 ILE ILE D . n D 1 13 ASN 13 231 231 ASN ASN D . n D 1 14 ILE 14 232 232 ILE ILE D . n D 1 15 GLN 15 233 233 GLN GLN D . n D 1 16 LEU 16 234 234 LEU LEU D . n D 1 17 ALA 17 235 235 ALA ALA D . n D 1 18 THR 18 236 236 THR THR D . n D 1 19 LYS 19 237 237 LYS LYS D . n D 1 20 ILE 20 238 238 ILE ILE D . n D 1 21 GLN 21 239 239 GLN GLN D . n D 1 22 HIS 22 240 240 HIS HIS D . n D 1 23 LEU 23 241 241 LEU LEU D . n D 1 24 GLU 24 242 242 GLU GLU D . n D 1 25 PHE 25 243 243 PHE PHE D . n D 1 26 SER 26 244 244 SER SER D . n D 1 27 CYS 27 245 245 CYS CYS D . n D 1 28 SER 28 246 246 SER SER D . n D 1 29 GLU 29 247 247 GLU GLU D . n D 1 30 LYS 30 248 248 LYS LYS D . n D 1 31 GLU 31 249 249 GLU GLU D . n D 1 32 GLN 32 250 250 GLN GLN D . n D 1 33 GLU 33 251 251 GLU GLU D . n D 1 34 ILE 34 252 252 ILE ILE D . n D 1 35 GLU 35 253 253 GLU GLU D . n D 1 36 ARG 36 254 254 ARG ARG D . n D 1 37 LEU 37 255 255 LEU LEU D . n D 1 38 ASN 38 256 256 ASN ASN D . n D 1 39 LYS 39 257 257 LYS LYS D . n D 1 40 LEU 40 258 258 LEU LEU D . n D 1 41 LEU 41 259 259 LEU LEU D . n D 1 42 LYS 42 260 260 LYS LYS D . n D 1 43 GLN 43 261 261 GLN GLN D . n D 1 44 ASN 44 262 262 ASN ASN D . n D 1 45 GLY 45 263 263 GLY GLY D . n D 1 46 LEU 46 264 264 LEU LEU D . n D 1 47 LEU 47 265 265 LEU LEU D . n D 1 48 GLY 48 266 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 HOH 1 301 1 HOH HOH A . E 2 HOH 2 302 8 HOH HOH A . E 2 HOH 3 303 19 HOH HOH A . E 2 HOH 4 304 20 HOH HOH A . E 2 HOH 5 305 28 HOH HOH A . E 2 HOH 6 306 29 HOH HOH A . E 2 HOH 7 307 33 HOH HOH A . E 2 HOH 8 308 39 HOH HOH A . E 2 HOH 9 309 42 HOH HOH A . E 2 HOH 10 310 44 HOH HOH A . E 2 HOH 11 311 51 HOH HOH A . E 2 HOH 12 312 56 HOH HOH A . E 2 HOH 13 313 61 HOH HOH A . E 2 HOH 14 314 67 HOH HOH A . E 2 HOH 15 315 68 HOH HOH A . E 2 HOH 16 316 70 HOH HOH A . E 2 HOH 17 317 83 HOH HOH A . E 2 HOH 18 318 85 HOH HOH A . E 2 HOH 19 319 86 HOH HOH A . E 2 HOH 20 320 87 HOH HOH A . E 2 HOH 21 321 88 HOH HOH A . E 2 HOH 22 322 90 HOH HOH A . E 2 HOH 23 323 94 HOH HOH A . E 2 HOH 24 324 98 HOH HOH A . E 2 HOH 25 325 100 HOH HOH A . E 2 HOH 26 326 102 HOH HOH A . E 2 HOH 27 327 104 HOH HOH A . E 2 HOH 28 328 105 HOH HOH A . E 2 HOH 29 329 113 HOH HOH A . E 2 HOH 30 330 115 HOH HOH A . E 2 HOH 31 331 116 HOH HOH A . E 2 HOH 32 332 123 HOH HOH A . E 2 HOH 33 333 124 HOH HOH A . E 2 HOH 34 334 125 HOH HOH A . E 2 HOH 35 335 126 HOH HOH A . E 2 HOH 36 336 127 HOH HOH A . E 2 HOH 37 337 128 HOH HOH A . E 2 HOH 38 338 131 HOH HOH A . E 2 HOH 39 339 132 HOH HOH A . E 2 HOH 40 340 133 HOH HOH A . E 2 HOH 41 341 136 HOH HOH A . E 2 HOH 42 342 138 HOH HOH A . E 2 HOH 43 343 142 HOH HOH A . E 2 HOH 44 344 143 HOH HOH A . E 2 HOH 45 345 157 HOH HOH A . E 2 HOH 46 346 165 HOH HOH A . E 2 HOH 47 347 166 HOH HOH A . E 2 HOH 48 348 176 HOH HOH A . E 2 HOH 49 349 178 HOH HOH A . E 2 HOH 50 350 179 HOH HOH A . E 2 HOH 51 351 180 HOH HOH A . E 2 HOH 52 352 181 HOH HOH A . E 2 HOH 53 353 182 HOH HOH A . E 2 HOH 54 354 183 HOH HOH A . E 2 HOH 55 355 184 HOH HOH A . E 2 HOH 56 356 185 HOH HOH A . E 2 HOH 57 357 188 HOH HOH A . E 2 HOH 58 358 197 HOH HOH A . E 2 HOH 59 359 198 HOH HOH A . E 2 HOH 60 360 207 HOH HOH A . E 2 HOH 61 361 95 HOH HOH A . E 2 HOH 62 362 130 HOH HOH A . F 2 HOH 1 301 2 HOH HOH C . F 2 HOH 2 302 3 HOH HOH C . F 2 HOH 3 303 4 HOH HOH C . F 2 HOH 4 304 13 HOH HOH C . F 2 HOH 5 305 14 HOH HOH C . F 2 HOH 6 306 16 HOH HOH C . F 2 HOH 7 307 17 HOH HOH C . F 2 HOH 8 308 18 HOH HOH C . F 2 HOH 9 309 25 HOH HOH C . F 2 HOH 10 310 27 HOH HOH C . F 2 HOH 11 311 32 HOH HOH C . F 2 HOH 12 312 34 HOH HOH C . F 2 HOH 13 313 41 HOH HOH C . F 2 HOH 14 314 43 HOH HOH C . F 2 HOH 15 315 46 HOH HOH C . F 2 HOH 16 316 49 HOH HOH C . F 2 HOH 17 317 64 HOH HOH C . F 2 HOH 18 318 65 HOH HOH C . F 2 HOH 19 319 66 HOH HOH C . F 2 HOH 20 320 73 HOH HOH C . F 2 HOH 21 321 75 HOH HOH C . F 2 HOH 22 322 76 HOH HOH C . F 2 HOH 23 323 77 HOH HOH C . F 2 HOH 24 324 82 HOH HOH C . F 2 HOH 25 325 99 HOH HOH C . F 2 HOH 26 326 101 HOH HOH C . F 2 HOH 27 327 107 HOH HOH C . F 2 HOH 28 328 108 HOH HOH C . F 2 HOH 29 329 111 HOH HOH C . F 2 HOH 30 330 114 HOH HOH C . F 2 HOH 31 331 121 HOH HOH C . F 2 HOH 32 332 139 HOH HOH C . F 2 HOH 33 333 144 HOH HOH C . F 2 HOH 34 334 146 HOH HOH C . F 2 HOH 35 335 147 HOH HOH C . F 2 HOH 36 336 148 HOH HOH C . F 2 HOH 37 337 150 HOH HOH C . F 2 HOH 38 338 151 HOH HOH C . F 2 HOH 39 339 152 HOH HOH C . F 2 HOH 40 340 153 HOH HOH C . F 2 HOH 41 341 154 HOH HOH C . F 2 HOH 42 342 155 HOH HOH C . F 2 HOH 43 343 156 HOH HOH C . F 2 HOH 44 344 175 HOH HOH C . F 2 HOH 45 345 186 HOH HOH C . F 2 HOH 46 346 187 HOH HOH C . F 2 HOH 47 347 189 HOH HOH C . F 2 HOH 48 348 194 HOH HOH C . F 2 HOH 49 349 196 HOH HOH C . F 2 HOH 50 350 202 HOH HOH C . F 2 HOH 51 351 203 HOH HOH C . F 2 HOH 52 352 204 HOH HOH C . F 2 HOH 53 353 214 HOH HOH C . F 2 HOH 54 354 215 HOH HOH C . F 2 HOH 55 355 216 HOH HOH C . F 2 HOH 56 356 217 HOH HOH C . F 2 HOH 57 357 218 HOH HOH C . G 2 HOH 1 301 1 HOH HOH B . G 2 HOH 2 302 6 HOH HOH B . G 2 HOH 3 303 9 HOH HOH B . G 2 HOH 4 304 10 HOH HOH B . G 2 HOH 5 305 11 HOH HOH B . G 2 HOH 6 306 12 HOH HOH B . G 2 HOH 7 307 15 HOH HOH B . G 2 HOH 8 308 24 HOH HOH B . G 2 HOH 9 309 30 HOH HOH B . G 2 HOH 10 310 35 HOH HOH B . G 2 HOH 11 311 36 HOH HOH B . G 2 HOH 12 312 37 HOH HOH B . G 2 HOH 13 313 38 HOH HOH B . G 2 HOH 14 314 45 HOH HOH B . G 2 HOH 15 315 48 HOH HOH B . G 2 HOH 16 316 52 HOH HOH B . G 2 HOH 17 317 54 HOH HOH B . G 2 HOH 18 318 57 HOH HOH B . G 2 HOH 19 319 58 HOH HOH B . G 2 HOH 20 320 59 HOH HOH B . G 2 HOH 21 321 60 HOH HOH B . G 2 HOH 22 322 71 HOH HOH B . G 2 HOH 23 323 72 HOH HOH B . G 2 HOH 24 324 78 HOH HOH B . G 2 HOH 25 325 79 HOH HOH B . G 2 HOH 26 326 80 HOH HOH B . G 2 HOH 27 327 84 HOH HOH B . G 2 HOH 28 328 91 HOH HOH B . G 2 HOH 29 329 92 HOH HOH B . G 2 HOH 30 330 96 HOH HOH B . G 2 HOH 31 331 109 HOH HOH B . G 2 HOH 32 332 118 HOH HOH B . G 2 HOH 33 333 119 HOH HOH B . G 2 HOH 34 334 134 HOH HOH B . G 2 HOH 35 335 135 HOH HOH B . G 2 HOH 36 336 140 HOH HOH B . G 2 HOH 37 337 141 HOH HOH B . G 2 HOH 38 338 158 HOH HOH B . G 2 HOH 39 339 159 HOH HOH B . G 2 HOH 40 340 160 HOH HOH B . G 2 HOH 41 341 161 HOH HOH B . G 2 HOH 42 342 162 HOH HOH B . G 2 HOH 43 343 163 HOH HOH B . G 2 HOH 44 344 164 HOH HOH B . G 2 HOH 45 345 167 HOH HOH B . G 2 HOH 46 346 168 HOH HOH B . G 2 HOH 47 347 169 HOH HOH B . G 2 HOH 48 348 170 HOH HOH B . G 2 HOH 49 349 171 HOH HOH B . G 2 HOH 50 350 172 HOH HOH B . G 2 HOH 51 351 173 HOH HOH B . G 2 HOH 52 352 174 HOH HOH B . G 2 HOH 53 353 177 HOH HOH B . G 2 HOH 54 354 190 HOH HOH B . G 2 HOH 55 355 191 HOH HOH B . G 2 HOH 56 356 195 HOH HOH B . G 2 HOH 57 357 199 HOH HOH B . G 2 HOH 58 358 201 HOH HOH B . G 2 HOH 59 359 206 HOH HOH B . G 2 HOH 60 360 210 HOH HOH B . G 2 HOH 61 361 211 HOH HOH B . G 2 HOH 62 362 212 HOH HOH B . G 2 HOH 63 363 267 HOH HOH B . G 2 HOH 64 364 268 HOH HOH B . G 2 HOH 65 365 269 HOH HOH B . H 2 HOH 1 301 81 HOH HOH D . H 2 HOH 2 302 5 HOH HOH D . H 2 HOH 3 303 7 HOH HOH D . H 2 HOH 4 304 21 HOH HOH D . H 2 HOH 5 305 22 HOH HOH D . H 2 HOH 6 306 23 HOH HOH D . H 2 HOH 7 307 26 HOH HOH D . H 2 HOH 8 308 31 HOH HOH D . H 2 HOH 9 309 40 HOH HOH D . H 2 HOH 10 310 47 HOH HOH D . H 2 HOH 11 311 50 HOH HOH D . H 2 HOH 12 312 53 HOH HOH D . H 2 HOH 13 313 55 HOH HOH D . H 2 HOH 14 314 62 HOH HOH D . H 2 HOH 15 315 63 HOH HOH D . H 2 HOH 16 316 69 HOH HOH D . H 2 HOH 17 317 74 HOH HOH D . H 2 HOH 18 318 89 HOH HOH D . H 2 HOH 19 319 93 HOH HOH D . H 2 HOH 20 320 97 HOH HOH D . H 2 HOH 21 321 103 HOH HOH D . H 2 HOH 22 322 106 HOH HOH D . H 2 HOH 23 323 110 HOH HOH D . H 2 HOH 24 324 112 HOH HOH D . H 2 HOH 25 325 117 HOH HOH D . H 2 HOH 26 326 120 HOH HOH D . H 2 HOH 27 327 122 HOH HOH D . H 2 HOH 28 328 129 HOH HOH D . H 2 HOH 29 329 137 HOH HOH D . H 2 HOH 30 330 145 HOH HOH D . H 2 HOH 31 331 149 HOH HOH D . H 2 HOH 32 332 192 HOH HOH D . H 2 HOH 33 333 193 HOH HOH D . H 2 HOH 34 334 200 HOH HOH D . H 2 HOH 35 335 205 HOH HOH D . H 2 HOH 36 336 208 HOH HOH D . H 2 HOH 37 337 209 HOH HOH D . H 2 HOH 38 338 213 HOH HOH D . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHASER phasing . ? 1 REFMAC refinement 5.5.0102 ? 2 HKL-2000 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # _cell.entry_id 3VMX _cell.length_a 40.156 _cell.length_b 54.010 _cell.length_c 81.439 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3VMX _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3VMX _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.97 _exptl_crystal.density_percent_sol 37.62 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 283 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details ;2% V/V TACSIMATE (PH 7.0), 0.1M IMIDAZOLE (PH 7.0), 8% W/V PEG 3350, 5% V/V 2-PROPANOL (PEGRX-2 # 26, HAMPTOM), VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 283K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 200 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RAYONIX MX225HE' _diffrn_detector.pdbx_collection_date 2009-11-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL44XU' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL44XU _diffrn_source.pdbx_wavelength 0.9000 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3VMX _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 1.450 _reflns.number_obs 232980 _reflns.number_all ? _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.05600 _reflns.pdbx_Rsym_value 0.05600 _reflns.pdbx_netI_over_sigmaI 43.9720 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.200 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.45 _reflns_shell.d_res_low 1.48 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.44000 _reflns_shell.pdbx_Rsym_value 0.44000 _reflns_shell.meanI_over_sigI_obs 4.741 _reflns_shell.pdbx_redundancy 7.30 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3VMX _refine.ls_number_reflns_obs 32168 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 45.01 _refine.ls_d_res_high 1.45 _refine.ls_percent_reflns_obs 99.7 _refine.ls_R_factor_obs 0.181 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.179 _refine.ls_R_factor_R_free 0.214 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1630 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.961 _refine.correlation_coeff_Fo_to_Fc_free 0.949 _refine.B_iso_mean 19.72 _refine.aniso_B[1][1] 0.07000 _refine.aniso_B[2][2] 0.13000 _refine.aniso_B[3][3] -0.20000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.080 _refine.overall_SU_ML 0.049 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 2.784 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1560 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 222 _refine_hist.number_atoms_total 1782 _refine_hist.d_res_high 1.45 _refine_hist.d_res_low 45.01 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.027 0.022 ? 1725 ? 'X-RAY DIFFRACTION' r_bond_other_d ? ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2.483 1.997 ? 2289 ? 'X-RAY DIFFRACTION' r_angle_other_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 4.444 5.000 ? 190 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 44.311 26.327 ? 98 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 16.452 15.000 ? 447 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 19.285 15.000 ? 14 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.175 0.200 ? 271 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.011 0.020 ? 1186 ? 'X-RAY DIFFRACTION' r_gen_planes_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1.430 1.500 ? 975 ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it 2.390 2.000 ? 1611 ? 'X-RAY DIFFRACTION' r_scbond_it 3.896 3.000 ? 750 ? 'X-RAY DIFFRACTION' r_scangle_it 6.174 4.500 ? 677 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.45 _refine_ls_shell.d_res_low 1.49 _refine_ls_shell.number_reflns_R_work 2228 _refine_ls_shell.R_factor_R_work 0.1970 _refine_ls_shell.percent_reflns_obs 98.95 _refine_ls_shell.R_factor_R_free 0.2470 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 128 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # _database_PDB_matrix.entry_id 3VMX _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3VMX _struct.title 'Crystal Structure of a parallel coiled-coil dimerization domain from the voltage-gated proton channel' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3VMX _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' _struct_keywords.text 'COILED-COIL, ION CHANNEL, ION TRANSPORT, MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code HVCN1_MOUSE _struct_ref.pdbx_db_accession Q3U2S8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code SERQILRLKQINIQLATKIQHLEFSCSEKEQEIERLNKLLKQNGLLG _struct_ref.pdbx_align_begin 220 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3VMX A 2 ? 48 ? Q3U2S8 220 ? 266 ? 220 266 2 1 3VMX C 2 ? 48 ? Q3U2S8 220 ? 266 ? 220 266 3 1 3VMX B 2 ? 48 ? Q3U2S8 220 ? 266 ? 220 266 4 1 3VMX D 2 ? 48 ? Q3U2S8 220 ? 266 ? 220 266 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3VMX GLY A 1 ? UNP Q3U2S8 ? ? 'expression tag' 219 1 2 3VMX GLY C 1 ? UNP Q3U2S8 ? ? 'expression tag' 219 2 3 3VMX GLY B 1 ? UNP Q3U2S8 ? ? 'expression tag' 219 3 4 3VMX GLY D 1 ? UNP Q3U2S8 ? ? 'expression tag' 219 4 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2290 ? 1 MORE -26 ? 1 'SSA (A^2)' 7080 ? 2 'ABSA (A^2)' 2290 ? 2 MORE -29 ? 2 'SSA (A^2)' 7280 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E,G 2 1 B,D,F,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 1 ? ASN A 44 ? GLY A 219 ASN A 262 1 ? 44 HELX_P HELX_P2 2 SER B 2 ? ASN B 44 ? SER C 220 ASN C 262 1 ? 43 HELX_P HELX_P3 3 GLY C 1 ? GLU C 3 ? GLY B 219 GLU B 221 5 ? 3 HELX_P HELX_P4 4 ARG C 4 ? ASN C 44 ? ARG B 222 ASN B 262 1 ? 41 HELX_P HELX_P5 5 SER D 2 ? ASN D 44 ? SER D 220 ASN D 262 1 ? 43 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 CG2 D THR 236 ? A O D HOH 327 ? ? 1.82 2 1 OE1 A GLN 233 ? A O A HOH 350 ? ? 1.99 3 1 OG1 D THR 236 ? B O D HOH 327 ? ? 2.14 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 NZ _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 LYS _pdbx_validate_symm_contact.auth_seq_id_1 257 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 OE2 _pdbx_validate_symm_contact.auth_asym_id_2 C _pdbx_validate_symm_contact.auth_comp_id_2 GLU _pdbx_validate_symm_contact.auth_seq_id_2 221 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 B _pdbx_validate_symm_contact.site_symmetry_2 1_455 _pdbx_validate_symm_contact.dist 2.19 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE B ARG 222 ? ? CZ B ARG 222 ? ? NH1 B ARG 222 ? ? 124.39 120.30 4.09 0.50 N 2 1 NE B ARG 222 ? ? CZ B ARG 222 ? ? NH2 B ARG 222 ? ? 115.96 120.30 -4.34 0.50 N 3 1 NE B ARG 226 ? ? CZ B ARG 226 ? B NH1 B ARG 226 ? B 125.22 120.30 4.92 0.50 N 4 1 NE B ARG 226 ? ? CZ B ARG 226 ? B NH2 B ARG 226 ? B 116.71 120.30 -3.59 0.50 N 5 1 CD D LYS 237 ? C CE D LYS 237 ? C NZ D LYS 237 ? C 97.04 111.70 -14.66 2.30 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id SER _pdbx_validate_torsion.auth_asym_id C _pdbx_validate_torsion.auth_seq_id 220 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -38.41 _pdbx_validate_torsion.psi -38.80 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 33.0721 32.4898 16.8454 0.0336 0.0230 0.0414 0.0143 0.0198 0.0169 0.4636 2.2008 0.9905 0.2563 0.1696 -1.1679 0.0175 -0.0468 -0.0365 -0.0498 0.0237 0.0716 0.0186 -0.0641 -0.0412 'X-RAY DIFFRACTION' 2 ? refined 45.4723 31.4943 26.0286 0.0508 0.0690 0.0371 0.0006 0.0150 0.0075 0.8026 1.4773 0.2270 -0.7917 -0.0690 0.1683 0.0547 0.0009 0.0753 0.0187 -0.0560 -0.0983 -0.0600 0.0468 0.0013 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 220 ? ? A 265 ? ? ? ? 'X-RAY DIFFRACTION' 2 1 B 220 ? ? B 265 ? ? ? ? 'X-RAY DIFFRACTION' 3 2 C 220 ? ? C 265 ? ? ? ? 'X-RAY DIFFRACTION' 4 2 D 220 ? ? D 265 ? ? ? ? # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id D _pdbx_unobs_or_zero_occ_residues.auth_comp_id GLY _pdbx_unobs_or_zero_occ_residues.auth_seq_id 266 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id D _pdbx_unobs_or_zero_occ_residues.label_comp_id GLY _pdbx_unobs_or_zero_occ_residues.label_seq_id 48 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 CYS N N N N 58 CYS CA C N R 59 CYS C C N N 60 CYS O O N N 61 CYS CB C N N 62 CYS SG S N N 63 CYS OXT O N N 64 CYS H H N N 65 CYS H2 H N N 66 CYS HA H N N 67 CYS HB2 H N N 68 CYS HB3 H N N 69 CYS HG H N N 70 CYS HXT H N N 71 GLN N N N N 72 GLN CA C N S 73 GLN C C N N 74 GLN O O N N 75 GLN CB C N N 76 GLN CG C N N 77 GLN CD C N N 78 GLN OE1 O N N 79 GLN NE2 N N N 80 GLN OXT O N N 81 GLN H H N N 82 GLN H2 H N N 83 GLN HA H N N 84 GLN HB2 H N N 85 GLN HB3 H N N 86 GLN HG2 H N N 87 GLN HG3 H N N 88 GLN HE21 H N N 89 GLN HE22 H N N 90 GLN HXT H N N 91 GLU N N N N 92 GLU CA C N S 93 GLU C C N N 94 GLU O O N N 95 GLU CB C N N 96 GLU CG C N N 97 GLU CD C N N 98 GLU OE1 O N N 99 GLU OE2 O N N 100 GLU OXT O N N 101 GLU H H N N 102 GLU H2 H N N 103 GLU HA H N N 104 GLU HB2 H N N 105 GLU HB3 H N N 106 GLU HG2 H N N 107 GLU HG3 H N N 108 GLU HE2 H N N 109 GLU HXT H N N 110 GLY N N N N 111 GLY CA C N N 112 GLY C C N N 113 GLY O O N N 114 GLY OXT O N N 115 GLY H H N N 116 GLY H2 H N N 117 GLY HA2 H N N 118 GLY HA3 H N N 119 GLY HXT H N N 120 HIS N N N N 121 HIS CA C N S 122 HIS C C N N 123 HIS O O N N 124 HIS CB C N N 125 HIS CG C Y N 126 HIS ND1 N Y N 127 HIS CD2 C Y N 128 HIS CE1 C Y N 129 HIS NE2 N Y N 130 HIS OXT O N N 131 HIS H H N N 132 HIS H2 H N N 133 HIS HA H N N 134 HIS HB2 H N N 135 HIS HB3 H N N 136 HIS HD1 H N N 137 HIS HD2 H N N 138 HIS HE1 H N N 139 HIS HE2 H N N 140 HIS HXT H N N 141 HOH O O N N 142 HOH H1 H N N 143 HOH H2 H N N 144 ILE N N N N 145 ILE CA C N S 146 ILE C C N N 147 ILE O O N N 148 ILE CB C N S 149 ILE CG1 C N N 150 ILE CG2 C N N 151 ILE CD1 C N N 152 ILE OXT O N N 153 ILE H H N N 154 ILE H2 H N N 155 ILE HA H N N 156 ILE HB H N N 157 ILE HG12 H N N 158 ILE HG13 H N N 159 ILE HG21 H N N 160 ILE HG22 H N N 161 ILE HG23 H N N 162 ILE HD11 H N N 163 ILE HD12 H N N 164 ILE HD13 H N N 165 ILE HXT H N N 166 LEU N N N N 167 LEU CA C N S 168 LEU C C N N 169 LEU O O N N 170 LEU CB C N N 171 LEU CG C N N 172 LEU CD1 C N N 173 LEU CD2 C N N 174 LEU OXT O N N 175 LEU H H N N 176 LEU H2 H N N 177 LEU HA H N N 178 LEU HB2 H N N 179 LEU HB3 H N N 180 LEU HG H N N 181 LEU HD11 H N N 182 LEU HD12 H N N 183 LEU HD13 H N N 184 LEU HD21 H N N 185 LEU HD22 H N N 186 LEU HD23 H N N 187 LEU HXT H N N 188 LYS N N N N 189 LYS CA C N S 190 LYS C C N N 191 LYS O O N N 192 LYS CB C N N 193 LYS CG C N N 194 LYS CD C N N 195 LYS CE C N N 196 LYS NZ N N N 197 LYS OXT O N N 198 LYS H H N N 199 LYS H2 H N N 200 LYS HA H N N 201 LYS HB2 H N N 202 LYS HB3 H N N 203 LYS HG2 H N N 204 LYS HG3 H N N 205 LYS HD2 H N N 206 LYS HD3 H N N 207 LYS HE2 H N N 208 LYS HE3 H N N 209 LYS HZ1 H N N 210 LYS HZ2 H N N 211 LYS HZ3 H N N 212 LYS HXT H N N 213 PHE N N N N 214 PHE CA C N S 215 PHE C C N N 216 PHE O O N N 217 PHE CB C N N 218 PHE CG C Y N 219 PHE CD1 C Y N 220 PHE CD2 C Y N 221 PHE CE1 C Y N 222 PHE CE2 C Y N 223 PHE CZ C Y N 224 PHE OXT O N N 225 PHE H H N N 226 PHE H2 H N N 227 PHE HA H N N 228 PHE HB2 H N N 229 PHE HB3 H N N 230 PHE HD1 H N N 231 PHE HD2 H N N 232 PHE HE1 H N N 233 PHE HE2 H N N 234 PHE HZ H N N 235 PHE HXT H N N 236 SER N N N N 237 SER CA C N S 238 SER C C N N 239 SER O O N N 240 SER CB C N N 241 SER OG O N N 242 SER OXT O N N 243 SER H H N N 244 SER H2 H N N 245 SER HA H N N 246 SER HB2 H N N 247 SER HB3 H N N 248 SER HG H N N 249 SER HXT H N N 250 THR N N N N 251 THR CA C N S 252 THR C C N N 253 THR O O N N 254 THR CB C N R 255 THR OG1 O N N 256 THR CG2 C N N 257 THR OXT O N N 258 THR H H N N 259 THR H2 H N N 260 THR HA H N N 261 THR HB H N N 262 THR HG1 H N N 263 THR HG21 H N N 264 THR HG22 H N N 265 THR HG23 H N N 266 THR HXT H N N 267 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 CYS N CA sing N N 55 CYS N H sing N N 56 CYS N H2 sing N N 57 CYS CA C sing N N 58 CYS CA CB sing N N 59 CYS CA HA sing N N 60 CYS C O doub N N 61 CYS C OXT sing N N 62 CYS CB SG sing N N 63 CYS CB HB2 sing N N 64 CYS CB HB3 sing N N 65 CYS SG HG sing N N 66 CYS OXT HXT sing N N 67 GLN N CA sing N N 68 GLN N H sing N N 69 GLN N H2 sing N N 70 GLN CA C sing N N 71 GLN CA CB sing N N 72 GLN CA HA sing N N 73 GLN C O doub N N 74 GLN C OXT sing N N 75 GLN CB CG sing N N 76 GLN CB HB2 sing N N 77 GLN CB HB3 sing N N 78 GLN CG CD sing N N 79 GLN CG HG2 sing N N 80 GLN CG HG3 sing N N 81 GLN CD OE1 doub N N 82 GLN CD NE2 sing N N 83 GLN NE2 HE21 sing N N 84 GLN NE2 HE22 sing N N 85 GLN OXT HXT sing N N 86 GLU N CA sing N N 87 GLU N H sing N N 88 GLU N H2 sing N N 89 GLU CA C sing N N 90 GLU CA CB sing N N 91 GLU CA HA sing N N 92 GLU C O doub N N 93 GLU C OXT sing N N 94 GLU CB CG sing N N 95 GLU CB HB2 sing N N 96 GLU CB HB3 sing N N 97 GLU CG CD sing N N 98 GLU CG HG2 sing N N 99 GLU CG HG3 sing N N 100 GLU CD OE1 doub N N 101 GLU CD OE2 sing N N 102 GLU OE2 HE2 sing N N 103 GLU OXT HXT sing N N 104 GLY N CA sing N N 105 GLY N H sing N N 106 GLY N H2 sing N N 107 GLY CA C sing N N 108 GLY CA HA2 sing N N 109 GLY CA HA3 sing N N 110 GLY C O doub N N 111 GLY C OXT sing N N 112 GLY OXT HXT sing N N 113 HIS N CA sing N N 114 HIS N H sing N N 115 HIS N H2 sing N N 116 HIS CA C sing N N 117 HIS CA CB sing N N 118 HIS CA HA sing N N 119 HIS C O doub N N 120 HIS C OXT sing N N 121 HIS CB CG sing N N 122 HIS CB HB2 sing N N 123 HIS CB HB3 sing N N 124 HIS CG ND1 sing Y N 125 HIS CG CD2 doub Y N 126 HIS ND1 CE1 doub Y N 127 HIS ND1 HD1 sing N N 128 HIS CD2 NE2 sing Y N 129 HIS CD2 HD2 sing N N 130 HIS CE1 NE2 sing Y N 131 HIS CE1 HE1 sing N N 132 HIS NE2 HE2 sing N N 133 HIS OXT HXT sing N N 134 HOH O H1 sing N N 135 HOH O H2 sing N N 136 ILE N CA sing N N 137 ILE N H sing N N 138 ILE N H2 sing N N 139 ILE CA C sing N N 140 ILE CA CB sing N N 141 ILE CA HA sing N N 142 ILE C O doub N N 143 ILE C OXT sing N N 144 ILE CB CG1 sing N N 145 ILE CB CG2 sing N N 146 ILE CB HB sing N N 147 ILE CG1 CD1 sing N N 148 ILE CG1 HG12 sing N N 149 ILE CG1 HG13 sing N N 150 ILE CG2 HG21 sing N N 151 ILE CG2 HG22 sing N N 152 ILE CG2 HG23 sing N N 153 ILE CD1 HD11 sing N N 154 ILE CD1 HD12 sing N N 155 ILE CD1 HD13 sing N N 156 ILE OXT HXT sing N N 157 LEU N CA sing N N 158 LEU N H sing N N 159 LEU N H2 sing N N 160 LEU CA C sing N N 161 LEU CA CB sing N N 162 LEU CA HA sing N N 163 LEU C O doub N N 164 LEU C OXT sing N N 165 LEU CB CG sing N N 166 LEU CB HB2 sing N N 167 LEU CB HB3 sing N N 168 LEU CG CD1 sing N N 169 LEU CG CD2 sing N N 170 LEU CG HG sing N N 171 LEU CD1 HD11 sing N N 172 LEU CD1 HD12 sing N N 173 LEU CD1 HD13 sing N N 174 LEU CD2 HD21 sing N N 175 LEU CD2 HD22 sing N N 176 LEU CD2 HD23 sing N N 177 LEU OXT HXT sing N N 178 LYS N CA sing N N 179 LYS N H sing N N 180 LYS N H2 sing N N 181 LYS CA C sing N N 182 LYS CA CB sing N N 183 LYS CA HA sing N N 184 LYS C O doub N N 185 LYS C OXT sing N N 186 LYS CB CG sing N N 187 LYS CB HB2 sing N N 188 LYS CB HB3 sing N N 189 LYS CG CD sing N N 190 LYS CG HG2 sing N N 191 LYS CG HG3 sing N N 192 LYS CD CE sing N N 193 LYS CD HD2 sing N N 194 LYS CD HD3 sing N N 195 LYS CE NZ sing N N 196 LYS CE HE2 sing N N 197 LYS CE HE3 sing N N 198 LYS NZ HZ1 sing N N 199 LYS NZ HZ2 sing N N 200 LYS NZ HZ3 sing N N 201 LYS OXT HXT sing N N 202 PHE N CA sing N N 203 PHE N H sing N N 204 PHE N H2 sing N N 205 PHE CA C sing N N 206 PHE CA CB sing N N 207 PHE CA HA sing N N 208 PHE C O doub N N 209 PHE C OXT sing N N 210 PHE CB CG sing N N 211 PHE CB HB2 sing N N 212 PHE CB HB3 sing N N 213 PHE CG CD1 doub Y N 214 PHE CG CD2 sing Y N 215 PHE CD1 CE1 sing Y N 216 PHE CD1 HD1 sing N N 217 PHE CD2 CE2 doub Y N 218 PHE CD2 HD2 sing N N 219 PHE CE1 CZ doub Y N 220 PHE CE1 HE1 sing N N 221 PHE CE2 CZ sing Y N 222 PHE CE2 HE2 sing N N 223 PHE CZ HZ sing N N 224 PHE OXT HXT sing N N 225 SER N CA sing N N 226 SER N H sing N N 227 SER N H2 sing N N 228 SER CA C sing N N 229 SER CA CB sing N N 230 SER CA HA sing N N 231 SER C O doub N N 232 SER C OXT sing N N 233 SER CB OG sing N N 234 SER CB HB2 sing N N 235 SER CB HB3 sing N N 236 SER OG HG sing N N 237 SER OXT HXT sing N N 238 THR N CA sing N N 239 THR N H sing N N 240 THR N H2 sing N N 241 THR CA C sing N N 242 THR CA CB sing N N 243 THR CA HA sing N N 244 THR C O doub N N 245 THR C OXT sing N N 246 THR CB OG1 sing N N 247 THR CB CG2 sing N N 248 THR CB HB sing N N 249 THR OG1 HG1 sing N N 250 THR CG2 HG21 sing N N 251 THR CG2 HG22 sing N N 252 THR CG2 HG23 sing N N 253 THR OXT HXT sing N N 254 # _atom_sites.entry_id 3VMX _atom_sites.fract_transf_matrix[1][1] 0.024903 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018515 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012279 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_