data_3VNE # _entry.id 3VNE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3VNE pdb_00003vne 10.2210/pdb3vne/pdb RCSB RCSB095262 ? ? WWPDB D_1000095262 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-04-18 2 'Structure model' 1 1 2017-11-22 3 'Structure model' 1 2 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' software 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.entry_id 3VNE _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2012-01-12 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4D9O . unspecified PDB 3VNF . unspecified # _audit_author.name 'Zhang, A.P.P.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID ? # _citation.id primary _citation.title 'The ebola virus interferon antagonist VP24 directly binds STAT1 and has a novel, pyramidal fold' _citation.journal_abbrev 'Plos Pathog.' _citation.journal_volume 8 _citation.page_first e1002550 _citation.page_last e1002550 _citation.year 2012 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1553-7366 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22383882 _citation.pdbx_database_id_DOI 10.1371/journal.ppat.1002550 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhang, A.P.P.' 1 ? primary 'Bornholdt, Z.A.' 2 ? primary 'Liu, T.' 3 ? primary 'Abelson, D.M.' 4 ? primary 'Lee, D.E.' 5 ? primary 'Li, S.' 6 ? primary 'Woods Jr., V.L.' 7 ? primary 'Saphire, E.O.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Membrane-associated protein VP24' 25379.445 1 ? V22A 'UNP residues 9-232' ? 2 water nat water 18.015 77 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Minor matrix protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;NLVTPKRELEQGVAFSDLCNFLVTPTVQGWKVYWAGLEFDVNQKGITLLNRLKVNDFAPAWAMTRNLFPHLFKNQQSEVQ TPIWALRVILAAGILDQLMDHSLIEPLSGALNLIADWLLTTSTNHFNMRTQRVKDQLSMRMLSLIRSNIINFINKLETLH VVNYKGLLSSVEIGTPSYAIIITRTNMGYLVEVQEPDKSAMDIRHPGPVKFSLLHESTLKPVAT ; _entity_poly.pdbx_seq_one_letter_code_can ;NLVTPKRELEQGVAFSDLCNFLVTPTVQGWKVYWAGLEFDVNQKGITLLNRLKVNDFAPAWAMTRNLFPHLFKNQQSEVQ TPIWALRVILAAGILDQLMDHSLIEPLSGALNLIADWLLTTSTNHFNMRTQRVKDQLSMRMLSLIRSNIINFINKLETLH VVNYKGLLSSVEIGTPSYAIIITRTNMGYLVEVQEPDKSAMDIRHPGPVKFSLLHESTLKPVAT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 LEU n 1 3 VAL n 1 4 THR n 1 5 PRO n 1 6 LYS n 1 7 ARG n 1 8 GLU n 1 9 LEU n 1 10 GLU n 1 11 GLN n 1 12 GLY n 1 13 VAL n 1 14 ALA n 1 15 PHE n 1 16 SER n 1 17 ASP n 1 18 LEU n 1 19 CYS n 1 20 ASN n 1 21 PHE n 1 22 LEU n 1 23 VAL n 1 24 THR n 1 25 PRO n 1 26 THR n 1 27 VAL n 1 28 GLN n 1 29 GLY n 1 30 TRP n 1 31 LYS n 1 32 VAL n 1 33 TYR n 1 34 TRP n 1 35 ALA n 1 36 GLY n 1 37 LEU n 1 38 GLU n 1 39 PHE n 1 40 ASP n 1 41 VAL n 1 42 ASN n 1 43 GLN n 1 44 LYS n 1 45 GLY n 1 46 ILE n 1 47 THR n 1 48 LEU n 1 49 LEU n 1 50 ASN n 1 51 ARG n 1 52 LEU n 1 53 LYS n 1 54 VAL n 1 55 ASN n 1 56 ASP n 1 57 PHE n 1 58 ALA n 1 59 PRO n 1 60 ALA n 1 61 TRP n 1 62 ALA n 1 63 MET n 1 64 THR n 1 65 ARG n 1 66 ASN n 1 67 LEU n 1 68 PHE n 1 69 PRO n 1 70 HIS n 1 71 LEU n 1 72 PHE n 1 73 LYS n 1 74 ASN n 1 75 GLN n 1 76 GLN n 1 77 SER n 1 78 GLU n 1 79 VAL n 1 80 GLN n 1 81 THR n 1 82 PRO n 1 83 ILE n 1 84 TRP n 1 85 ALA n 1 86 LEU n 1 87 ARG n 1 88 VAL n 1 89 ILE n 1 90 LEU n 1 91 ALA n 1 92 ALA n 1 93 GLY n 1 94 ILE n 1 95 LEU n 1 96 ASP n 1 97 GLN n 1 98 LEU n 1 99 MET n 1 100 ASP n 1 101 HIS n 1 102 SER n 1 103 LEU n 1 104 ILE n 1 105 GLU n 1 106 PRO n 1 107 LEU n 1 108 SER n 1 109 GLY n 1 110 ALA n 1 111 LEU n 1 112 ASN n 1 113 LEU n 1 114 ILE n 1 115 ALA n 1 116 ASP n 1 117 TRP n 1 118 LEU n 1 119 LEU n 1 120 THR n 1 121 THR n 1 122 SER n 1 123 THR n 1 124 ASN n 1 125 HIS n 1 126 PHE n 1 127 ASN n 1 128 MET n 1 129 ARG n 1 130 THR n 1 131 GLN n 1 132 ARG n 1 133 VAL n 1 134 LYS n 1 135 ASP n 1 136 GLN n 1 137 LEU n 1 138 SER n 1 139 MET n 1 140 ARG n 1 141 MET n 1 142 LEU n 1 143 SER n 1 144 LEU n 1 145 ILE n 1 146 ARG n 1 147 SER n 1 148 ASN n 1 149 ILE n 1 150 ILE n 1 151 ASN n 1 152 PHE n 1 153 ILE n 1 154 ASN n 1 155 LYS n 1 156 LEU n 1 157 GLU n 1 158 THR n 1 159 LEU n 1 160 HIS n 1 161 VAL n 1 162 VAL n 1 163 ASN n 1 164 TYR n 1 165 LYS n 1 166 GLY n 1 167 LEU n 1 168 LEU n 1 169 SER n 1 170 SER n 1 171 VAL n 1 172 GLU n 1 173 ILE n 1 174 GLY n 1 175 THR n 1 176 PRO n 1 177 SER n 1 178 TYR n 1 179 ALA n 1 180 ILE n 1 181 ILE n 1 182 ILE n 1 183 THR n 1 184 ARG n 1 185 THR n 1 186 ASN n 1 187 MET n 1 188 GLY n 1 189 TYR n 1 190 LEU n 1 191 VAL n 1 192 GLU n 1 193 VAL n 1 194 GLN n 1 195 GLU n 1 196 PRO n 1 197 ASP n 1 198 LYS n 1 199 SER n 1 200 ALA n 1 201 MET n 1 202 ASP n 1 203 ILE n 1 204 ARG n 1 205 HIS n 1 206 PRO n 1 207 GLY n 1 208 PRO n 1 209 VAL n 1 210 LYS n 1 211 PHE n 1 212 SER n 1 213 LEU n 1 214 LEU n 1 215 HIS n 1 216 GLU n 1 217 SER n 1 218 THR n 1 219 LEU n 1 220 LYS n 1 221 PRO n 1 222 VAL n 1 223 ALA n 1 224 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene VP24 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Sudan ebolavirus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 186540 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 9 9 ASN ASN A . n A 1 2 LEU 2 10 10 LEU LEU A . n A 1 3 VAL 3 11 11 VAL VAL A . n A 1 4 THR 4 12 12 THR THR A . n A 1 5 PRO 5 13 13 PRO PRO A . n A 1 6 LYS 6 14 14 LYS LYS A . n A 1 7 ARG 7 15 15 ARG ARG A . n A 1 8 GLU 8 16 16 GLU GLU A . n A 1 9 LEU 9 17 17 LEU LEU A . n A 1 10 GLU 10 18 18 GLU GLU A . n A 1 11 GLN 11 19 19 GLN GLN A . n A 1 12 GLY 12 20 20 GLY GLY A . n A 1 13 VAL 13 21 21 VAL VAL A . n A 1 14 ALA 14 22 22 ALA ALA A . n A 1 15 PHE 15 23 23 PHE PHE A . n A 1 16 SER 16 24 24 SER SER A . n A 1 17 ASP 17 25 25 ASP ASP A . n A 1 18 LEU 18 26 26 LEU LEU A . n A 1 19 CYS 19 27 27 CYS CYS A . n A 1 20 ASN 20 28 28 ASN ASN A . n A 1 21 PHE 21 29 29 PHE PHE A . n A 1 22 LEU 22 30 30 LEU LEU A . n A 1 23 VAL 23 31 31 VAL VAL A . n A 1 24 THR 24 32 32 THR THR A . n A 1 25 PRO 25 33 33 PRO PRO A . n A 1 26 THR 26 34 34 THR THR A . n A 1 27 VAL 27 35 35 VAL VAL A . n A 1 28 GLN 28 36 36 GLN GLN A . n A 1 29 GLY 29 37 37 GLY GLY A . n A 1 30 TRP 30 38 38 TRP TRP A . n A 1 31 LYS 31 39 39 LYS LYS A . n A 1 32 VAL 32 40 40 VAL VAL A . n A 1 33 TYR 33 41 41 TYR TYR A . n A 1 34 TRP 34 42 42 TRP TRP A . n A 1 35 ALA 35 43 43 ALA ALA A . n A 1 36 GLY 36 44 44 GLY GLY A . n A 1 37 LEU 37 45 45 LEU LEU A . n A 1 38 GLU 38 46 46 GLU GLU A . n A 1 39 PHE 39 47 47 PHE PHE A . n A 1 40 ASP 40 48 48 ASP ASP A . n A 1 41 VAL 41 49 49 VAL VAL A . n A 1 42 ASN 42 50 50 ASN ASN A . n A 1 43 GLN 43 51 51 GLN GLN A . n A 1 44 LYS 44 52 52 LYS LYS A . n A 1 45 GLY 45 53 53 GLY GLY A . n A 1 46 ILE 46 54 54 ILE ILE A . n A 1 47 THR 47 55 55 THR THR A . n A 1 48 LEU 48 56 56 LEU LEU A . n A 1 49 LEU 49 57 57 LEU LEU A . n A 1 50 ASN 50 58 58 ASN ASN A . n A 1 51 ARG 51 59 59 ARG ARG A . n A 1 52 LEU 52 60 60 LEU LEU A . n A 1 53 LYS 53 61 61 LYS LYS A . n A 1 54 VAL 54 62 62 VAL VAL A . n A 1 55 ASN 55 63 63 ASN ASN A . n A 1 56 ASP 56 64 64 ASP ASP A . n A 1 57 PHE 57 65 65 PHE PHE A . n A 1 58 ALA 58 66 66 ALA ALA A . n A 1 59 PRO 59 67 67 PRO PRO A . n A 1 60 ALA 60 68 68 ALA ALA A . n A 1 61 TRP 61 69 69 TRP TRP A . n A 1 62 ALA 62 70 70 ALA ALA A . n A 1 63 MET 63 71 71 MET MET A . n A 1 64 THR 64 72 72 THR THR A . n A 1 65 ARG 65 73 73 ARG ARG A . n A 1 66 ASN 66 74 74 ASN ASN A . n A 1 67 LEU 67 75 75 LEU LEU A . n A 1 68 PHE 68 76 76 PHE PHE A . n A 1 69 PRO 69 77 77 PRO PRO A . n A 1 70 HIS 70 78 78 HIS HIS A . n A 1 71 LEU 71 79 79 LEU LEU A . n A 1 72 PHE 72 80 80 PHE PHE A . n A 1 73 LYS 73 81 81 LYS LYS A . n A 1 74 ASN 74 82 82 ASN ASN A . n A 1 75 GLN 75 83 83 GLN GLN A . n A 1 76 GLN 76 84 84 GLN GLN A . n A 1 77 SER 77 85 85 SER SER A . n A 1 78 GLU 78 86 86 GLU GLU A . n A 1 79 VAL 79 87 87 VAL VAL A . n A 1 80 GLN 80 88 88 GLN GLN A . n A 1 81 THR 81 89 89 THR THR A . n A 1 82 PRO 82 90 90 PRO PRO A . n A 1 83 ILE 83 91 91 ILE ILE A . n A 1 84 TRP 84 92 92 TRP TRP A . n A 1 85 ALA 85 93 93 ALA ALA A . n A 1 86 LEU 86 94 94 LEU LEU A . n A 1 87 ARG 87 95 95 ARG ARG A . n A 1 88 VAL 88 96 96 VAL VAL A . n A 1 89 ILE 89 97 97 ILE ILE A . n A 1 90 LEU 90 98 98 LEU LEU A . n A 1 91 ALA 91 99 99 ALA ALA A . n A 1 92 ALA 92 100 100 ALA ALA A . n A 1 93 GLY 93 101 101 GLY GLY A . n A 1 94 ILE 94 102 102 ILE ILE A . n A 1 95 LEU 95 103 103 LEU LEU A . n A 1 96 ASP 96 104 104 ASP ASP A . n A 1 97 GLN 97 105 105 GLN GLN A . n A 1 98 LEU 98 106 106 LEU LEU A . n A 1 99 MET 99 107 ? ? ? A . n A 1 100 ASP 100 108 ? ? ? A . n A 1 101 HIS 101 109 ? ? ? A . n A 1 102 SER 102 110 ? ? ? A . n A 1 103 LEU 103 111 ? ? ? A . n A 1 104 ILE 104 112 ? ? ? A . n A 1 105 GLU 105 113 113 GLU ALA A . n A 1 106 PRO 106 114 114 PRO PRO A . n A 1 107 LEU 107 115 115 LEU LEU A . n A 1 108 SER 108 116 116 SER SER A . n A 1 109 GLY 109 117 117 GLY GLY A . n A 1 110 ALA 110 118 118 ALA ALA A . n A 1 111 LEU 111 119 119 LEU LEU A . n A 1 112 ASN 112 120 120 ASN ASN A . n A 1 113 LEU 113 121 121 LEU LEU A . n A 1 114 ILE 114 122 122 ILE ILE A . n A 1 115 ALA 115 123 123 ALA ALA A . n A 1 116 ASP 116 124 124 ASP ASP A . n A 1 117 TRP 117 125 125 TRP TRP A . n A 1 118 LEU 118 126 126 LEU LEU A . n A 1 119 LEU 119 127 127 LEU LEU A . n A 1 120 THR 120 128 128 THR THR A . n A 1 121 THR 121 129 129 THR THR A . n A 1 122 SER 122 130 130 SER SER A . n A 1 123 THR 123 131 131 THR THR A . n A 1 124 ASN 124 132 132 ASN ASN A . n A 1 125 HIS 125 133 133 HIS HIS A . n A 1 126 PHE 126 134 134 PHE PHE A . n A 1 127 ASN 127 135 135 ASN ASN A . n A 1 128 MET 128 136 136 MET MET A . n A 1 129 ARG 129 137 137 ARG ARG A . n A 1 130 THR 130 138 138 THR THR A . n A 1 131 GLN 131 139 139 GLN GLN A . n A 1 132 ARG 132 140 140 ARG ARG A . n A 1 133 VAL 133 141 141 VAL VAL A . n A 1 134 LYS 134 142 142 LYS LYS A . n A 1 135 ASP 135 143 143 ASP ASP A . n A 1 136 GLN 136 144 144 GLN GLN A . n A 1 137 LEU 137 145 145 LEU LEU A . n A 1 138 SER 138 146 146 SER SER A . n A 1 139 MET 139 147 147 MET MET A . n A 1 140 ARG 140 148 148 ARG ARG A . n A 1 141 MET 141 149 149 MET MET A . n A 1 142 LEU 142 150 150 LEU LEU A . n A 1 143 SER 143 151 151 SER SER A . n A 1 144 LEU 144 152 152 LEU LEU A . n A 1 145 ILE 145 153 153 ILE ILE A . n A 1 146 ARG 146 154 154 ARG ARG A . n A 1 147 SER 147 155 155 SER SER A . n A 1 148 ASN 148 156 156 ASN ASN A . n A 1 149 ILE 149 157 157 ILE ILE A . n A 1 150 ILE 150 158 158 ILE ILE A . n A 1 151 ASN 151 159 159 ASN ASN A . n A 1 152 PHE 152 160 160 PHE PHE A . n A 1 153 ILE 153 161 161 ILE ILE A . n A 1 154 ASN 154 162 162 ASN ASN A . n A 1 155 LYS 155 163 163 LYS LYS A . n A 1 156 LEU 156 164 164 LEU LEU A . n A 1 157 GLU 157 165 165 GLU GLU A . n A 1 158 THR 158 166 166 THR THR A . n A 1 159 LEU 159 167 167 LEU LEU A . n A 1 160 HIS 160 168 168 HIS HIS A . n A 1 161 VAL 161 169 169 VAL VAL A . n A 1 162 VAL 162 170 170 VAL VAL A . n A 1 163 ASN 163 171 171 ASN ASN A . n A 1 164 TYR 164 172 172 TYR TYR A . n A 1 165 LYS 165 173 173 LYS LYS A . n A 1 166 GLY 166 174 174 GLY GLY A . n A 1 167 LEU 167 175 175 LEU LEU A . n A 1 168 LEU 168 176 176 LEU LEU A . n A 1 169 SER 169 177 177 SER SER A . n A 1 170 SER 170 178 178 SER SER A . n A 1 171 VAL 171 179 179 VAL VAL A . n A 1 172 GLU 172 180 180 GLU GLU A . n A 1 173 ILE 173 181 181 ILE ILE A . n A 1 174 GLY 174 182 182 GLY GLY A . n A 1 175 THR 175 183 183 THR THR A . n A 1 176 PRO 176 184 184 PRO PRO A . n A 1 177 SER 177 185 185 SER SER A . n A 1 178 TYR 178 186 186 TYR TYR A . n A 1 179 ALA 179 187 187 ALA ALA A . n A 1 180 ILE 180 188 188 ILE ILE A . n A 1 181 ILE 181 189 189 ILE ILE A . n A 1 182 ILE 182 190 190 ILE ILE A . n A 1 183 THR 183 191 191 THR THR A . n A 1 184 ARG 184 192 192 ARG ARG A . n A 1 185 THR 185 193 193 THR THR A . n A 1 186 ASN 186 194 194 ASN ASN A . n A 1 187 MET 187 195 195 MET MET A . n A 1 188 GLY 188 196 196 GLY GLY A . n A 1 189 TYR 189 197 197 TYR TYR A . n A 1 190 LEU 190 198 198 LEU LEU A . n A 1 191 VAL 191 199 199 VAL VAL A . n A 1 192 GLU 192 200 200 GLU GLU A . n A 1 193 VAL 193 201 201 VAL VAL A . n A 1 194 GLN 194 202 202 GLN GLN A . n A 1 195 GLU 195 203 203 GLU GLU A . n A 1 196 PRO 196 204 204 PRO PRO A . n A 1 197 ASP 197 205 205 ASP ASP A . n A 1 198 LYS 198 206 206 LYS LYS A . n A 1 199 SER 199 207 207 SER SER A . n A 1 200 ALA 200 208 208 ALA ALA A . n A 1 201 MET 201 209 209 MET MET A . n A 1 202 ASP 202 210 210 ASP ALA A . n A 1 203 ILE 203 211 211 ILE ALA A . n A 1 204 ARG 204 212 212 ARG ALA A . n A 1 205 HIS 205 213 213 HIS ALA A . n A 1 206 PRO 206 214 214 PRO PRO A . n A 1 207 GLY 207 215 215 GLY GLY A . n A 1 208 PRO 208 216 216 PRO PRO A . n A 1 209 VAL 209 217 217 VAL VAL A . n A 1 210 LYS 210 218 218 LYS LYS A . n A 1 211 PHE 211 219 219 PHE PHE A . n A 1 212 SER 212 220 220 SER SER A . n A 1 213 LEU 213 221 221 LEU LEU A . n A 1 214 LEU 214 222 222 LEU LEU A . n A 1 215 HIS 215 223 223 HIS HIS A . n A 1 216 GLU 216 224 224 GLU GLU A . n A 1 217 SER 217 225 225 SER SER A . n A 1 218 THR 218 226 226 THR THR A . n A 1 219 LEU 219 227 227 LEU LEU A . n A 1 220 LYS 220 228 228 LYS LYS A . n A 1 221 PRO 221 229 229 PRO PRO A . n A 1 222 VAL 222 230 230 VAL VAL A . n A 1 223 ALA 223 231 231 ALA ALA A . n A 1 224 THR 224 232 232 THR THR A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 301 1 HOH HOH A . B 2 HOH 2 302 2 HOH HOH A . B 2 HOH 3 303 3 HOH HOH A . B 2 HOH 4 304 4 HOH HOH A . B 2 HOH 5 305 5 HOH HOH A . B 2 HOH 6 306 6 HOH HOH A . B 2 HOH 7 307 7 HOH HOH A . B 2 HOH 8 308 8 HOH HOH A . B 2 HOH 9 309 9 HOH HOH A . B 2 HOH 10 310 10 HOH HOH A . B 2 HOH 11 311 11 HOH HOH A . B 2 HOH 12 312 12 HOH HOH A . B 2 HOH 13 313 13 HOH HOH A . B 2 HOH 14 314 14 HOH HOH A . B 2 HOH 15 315 15 HOH HOH A . B 2 HOH 16 316 16 HOH HOH A . B 2 HOH 17 317 17 HOH HOH A . B 2 HOH 18 318 18 HOH HOH A . B 2 HOH 19 319 19 HOH HOH A . B 2 HOH 20 320 20 HOH HOH A . B 2 HOH 21 321 21 HOH HOH A . B 2 HOH 22 322 22 HOH HOH A . B 2 HOH 23 323 23 HOH HOH A . B 2 HOH 24 324 24 HOH HOH A . B 2 HOH 25 325 25 HOH HOH A . B 2 HOH 26 326 26 HOH HOH A . B 2 HOH 27 327 27 HOH HOH A . B 2 HOH 28 328 28 HOH HOH A . B 2 HOH 29 329 29 HOH HOH A . B 2 HOH 30 330 30 HOH HOH A . B 2 HOH 31 331 31 HOH HOH A . B 2 HOH 32 332 32 HOH HOH A . B 2 HOH 33 333 33 HOH HOH A . B 2 HOH 34 334 34 HOH HOH A . B 2 HOH 35 335 35 HOH HOH A . B 2 HOH 36 336 36 HOH HOH A . B 2 HOH 37 337 37 HOH HOH A . B 2 HOH 38 338 38 HOH HOH A . B 2 HOH 39 339 39 HOH HOH A . B 2 HOH 40 340 40 HOH HOH A . B 2 HOH 41 341 41 HOH HOH A . B 2 HOH 42 342 42 HOH HOH A . B 2 HOH 43 343 43 HOH HOH A . B 2 HOH 44 344 44 HOH HOH A . B 2 HOH 45 345 45 HOH HOH A . B 2 HOH 46 346 46 HOH HOH A . B 2 HOH 47 347 47 HOH HOH A . B 2 HOH 48 348 48 HOH HOH A . B 2 HOH 49 349 49 HOH HOH A . B 2 HOH 50 350 50 HOH HOH A . B 2 HOH 51 351 51 HOH HOH A . B 2 HOH 52 352 52 HOH HOH A . B 2 HOH 53 353 53 HOH HOH A . B 2 HOH 54 354 54 HOH HOH A . B 2 HOH 55 355 55 HOH HOH A . B 2 HOH 56 356 56 HOH HOH A . B 2 HOH 57 357 57 HOH HOH A . B 2 HOH 58 358 58 HOH HOH A . B 2 HOH 59 359 59 HOH HOH A . B 2 HOH 60 360 60 HOH HOH A . B 2 HOH 61 361 61 HOH HOH A . B 2 HOH 62 362 62 HOH HOH A . B 2 HOH 63 363 63 HOH HOH A . B 2 HOH 64 364 64 HOH HOH A . B 2 HOH 65 365 66 HOH HOH A . B 2 HOH 66 366 67 HOH HOH A . B 2 HOH 67 367 68 HOH HOH A . B 2 HOH 68 368 69 HOH HOH A . B 2 HOH 69 369 70 HOH HOH A . B 2 HOH 70 370 71 HOH HOH A . B 2 HOH 71 371 72 HOH HOH A . B 2 HOH 72 372 73 HOH HOH A . B 2 HOH 73 373 74 HOH HOH A . B 2 HOH 74 374 75 HOH HOH A . B 2 HOH 75 375 76 HOH HOH A . B 2 HOH 76 376 77 HOH HOH A . B 2 HOH 77 377 78 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 113 ? CG ? A GLU 105 CG 2 1 Y 1 A GLU 113 ? CD ? A GLU 105 CD 3 1 Y 1 A GLU 113 ? OE1 ? A GLU 105 OE1 4 1 Y 1 A GLU 113 ? OE2 ? A GLU 105 OE2 5 1 Y 1 A ASP 210 ? CG ? A ASP 202 CG 6 1 Y 1 A ASP 210 ? OD1 ? A ASP 202 OD1 7 1 Y 1 A ASP 210 ? OD2 ? A ASP 202 OD2 8 1 Y 1 A ILE 211 ? CG1 ? A ILE 203 CG1 9 1 Y 1 A ILE 211 ? CG2 ? A ILE 203 CG2 10 1 Y 1 A ILE 211 ? CD1 ? A ILE 203 CD1 11 1 Y 1 A ARG 212 ? CG ? A ARG 204 CG 12 1 Y 1 A ARG 212 ? CD ? A ARG 204 CD 13 1 Y 1 A ARG 212 ? NE ? A ARG 204 NE 14 1 Y 1 A ARG 212 ? CZ ? A ARG 204 CZ 15 1 Y 1 A ARG 212 ? NH1 ? A ARG 204 NH1 16 1 Y 1 A ARG 212 ? NH2 ? A ARG 204 NH2 17 1 Y 1 A HIS 213 ? CG ? A HIS 205 CG 18 1 Y 1 A HIS 213 ? ND1 ? A HIS 205 ND1 19 1 Y 1 A HIS 213 ? CD2 ? A HIS 205 CD2 20 1 Y 1 A HIS 213 ? CE1 ? A HIS 205 CE1 21 1 Y 1 A HIS 213 ? NE2 ? A HIS 205 NE2 # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 d*TREK . ? package 'Jim W. Pflugrath' Jim.Pflugrath@Rigaku.com 'data scaling' http://www.rigaku.com/software/dtrek.html ? ? 2 PHENIX 1.6.4_486 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 3 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 5 d*TREK . ? ? ? ? 'data reduction' ? ? ? # _cell.entry_id 3VNE _cell.length_a 61.052 _cell.length_b 61.052 _cell.length_c 130.352 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3VNE _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3VNE _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.76 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 55.44 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 295 _exptl_crystal_grow.pdbx_details '0.1M HEPES, 0.1M MgCl, 8% PEG 550mme, pH 7.5, vapor diffusion, temperature 295K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2010-10-30 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Rosenbaum-Rock high-resolution double-crystal monochromator. LN2 cooled first crystal, sagittal focusing 2nd crystal.' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_wavelength_list 0.979 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID # _reflns.entry_id 3VNE _reflns.B_iso_Wilson_estimate 43.620 _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 2.0 _reflns.d_resolution_low 33.6 _reflns.number_all 19597 _reflns.number_obs 19519 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs 0.068 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 8.4 _reflns.pdbx_redundancy 10.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.0 _reflns_shell.d_res_low ? _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 99.6 _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3VNE _refine.ls_d_res_high 2.0000 _refine.ls_d_res_low 33.5690 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 91.5 _refine.ls_number_reflns_obs 18009 _refine.ls_number_reflns_all 19597 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details random _refine.details ? _refine.ls_R_factor_all 0.2241 _refine.ls_R_factor_obs 0.2241 _refine.ls_R_factor_R_work 0.2197 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2628 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 9.9200 _refine.ls_number_reflns_R_free 1787 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 53.0937 _refine.solvent_model_param_bsol 45.2990 _refine.solvent_model_param_ksol 0.3540 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.0000 _refine.aniso_B[2][2] 0.0000 _refine.aniso_B[3][3] 0.0000 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.3800 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.8300 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.7373 _refine.B_iso_max 142.860 _refine.B_iso_min 24.270 _refine.pdbx_overall_phase_error 31.2500 _refine.occupancy_max 1.000 _refine.occupancy_min 0.300 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1717 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 77 _refine_hist.number_atoms_total 1794 _refine_hist.d_res_high 2.0000 _refine_hist.d_res_low 33.5690 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 1842 0.015 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 2408 1.106 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 286 0.071 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 303 0.005 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 646 13.721 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.redundancy_reflns_obs 2.0001 2.0716 10 81.0000 1407 . 0.4379 0.4986 . 148 . 1555 . 'X-RAY DIFFRACTION' . 2.0716 2.1545 10 83.0000 1443 . 0.3958 0.4022 . 151 . 1594 . 'X-RAY DIFFRACTION' . 2.1545 2.2525 10 84.0000 1471 . 0.3446 0.3975 . 167 . 1638 . 'X-RAY DIFFRACTION' . 2.2525 2.3713 10 87.0000 1501 . 0.3377 0.3836 . 168 . 1669 . 'X-RAY DIFFRACTION' . 2.3713 2.5198 10 94.0000 1658 . 0.3065 0.3529 . 179 . 1837 . 'X-RAY DIFFRACTION' . 2.5198 2.7143 10 96.0000 1691 . 0.2624 0.3766 . 187 . 1878 . 'X-RAY DIFFRACTION' . 2.7143 2.9873 10 97.0000 1697 . 0.2368 0.2774 . 194 . 1891 . 'X-RAY DIFFRACTION' . 2.9873 3.4192 10 98.0000 1752 . 0.2222 0.2697 . 201 . 1953 . 'X-RAY DIFFRACTION' . 3.4192 4.3063 10 98.0000 1765 . 0.1731 0.2152 . 197 . 1962 . 'X-RAY DIFFRACTION' . 4.3063 33.5741 10 96.0000 1837 . 0.1748 0.2013 . 195 . 2032 . 'X-RAY DIFFRACTION' . # _struct.entry_id 3VNE _struct.title 'Structure of the ebolavirus protein VP24 from Sudan' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3VNE _struct_keywords.text 'ebolavirus, interferon antagonist, VP24, STAT1, Zaire, Sudan, Reston, VP35, karyopherin alpha, IFN response pathway, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B0LPM0_9MONO _struct_ref.pdbx_db_accession B0LPM0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NLVTPKRELEQGVVFSDLCNFLVTPTVQGWKVYWAGLEFDVNQKGITLLNRLKVNDFAPAWAMTRNLFPHLFKNQQSEVQ TPIWALRVILAAGILDQLMDHSLIEPLSGALNLIADWLLTTSTNHFNMRTQRVKDQLSMRMLSLIRSNIINFINKLETLH VVNYKGLLSSVEIGTPSYAIIITRTNMGYLVEVQEPDKSAMDIRHPGPVKFSLLHESTLKPVAT ; _struct_ref.pdbx_align_begin 9 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3VNE _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 224 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession B0LPM0 _struct_ref_seq.db_align_beg 9 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 232 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 9 _struct_ref_seq.pdbx_auth_seq_align_end 232 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3VNE _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 14 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code B0LPM0 _struct_ref_seq_dif.db_mon_id VAL _struct_ref_seq_dif.pdbx_seq_db_seq_num 22 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 22 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 1760 ? 2 MORE -13 ? 2 'SSA (A^2)' 21860 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B 2 1,2 A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_554 x-y,-y,-z-1/3 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -43.4506666667 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 7 ? ASN A 20 ? ARG A 15 ASN A 28 1 ? 14 HELX_P HELX_P2 2 GLY A 45 ? VAL A 54 ? GLY A 53 VAL A 62 1 ? 10 HELX_P HELX_P3 3 ALA A 58 ? ALA A 60 ? ALA A 66 ALA A 68 5 ? 3 HELX_P HELX_P4 4 TRP A 61 ? PHE A 68 ? TRP A 69 PHE A 76 1 ? 8 HELX_P HELX_P5 5 PHE A 68 ? LYS A 73 ? PHE A 76 LYS A 81 1 ? 6 HELX_P HELX_P6 6 THR A 81 ? ASP A 96 ? THR A 89 ASP A 104 1 ? 16 HELX_P HELX_P7 7 PRO A 106 ? THR A 121 ? PRO A 114 THR A 129 1 ? 16 HELX_P HELX_P8 8 THR A 130 ? LEU A 137 ? THR A 138 LEU A 145 1 ? 8 HELX_P HELX_P9 9 SER A 138 ? THR A 158 ? SER A 146 THR A 166 1 ? 21 HELX_P HELX_P10 10 LYS A 198 ? ASP A 202 ? LYS A 206 ASP A 210 5 ? 5 HELX_P HELX_P11 11 LEU A 219 ? ALA A 223 ? LEU A 227 ALA A 231 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 22 ? PRO A 25 ? LEU A 30 PRO A 33 A 2 GLY A 29 ? TRP A 34 ? GLY A 37 TRP A 42 A 3 LEU A 37 ? ASN A 42 ? LEU A 45 ASN A 50 B 1 SER A 77 ? VAL A 79 ? SER A 85 VAL A 87 B 2 VAL A 209 ? HIS A 215 ? VAL A 217 HIS A 223 B 3 GLY A 188 ? GLN A 194 ? GLY A 196 GLN A 202 B 4 ALA A 179 ? ARG A 184 ? ALA A 187 ARG A 192 B 5 SER A 170 ? GLY A 174 ? SER A 178 GLY A 182 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 24 ? N THR A 32 O LYS A 31 ? O LYS A 39 A 2 3 N TRP A 30 ? N TRP A 38 O VAL A 41 ? O VAL A 49 B 1 2 N GLU A 78 ? N GLU A 86 O PHE A 211 ? O PHE A 219 B 2 3 O LEU A 214 ? O LEU A 222 N TYR A 189 ? N TYR A 197 B 3 4 O GLN A 194 ? O GLN A 202 N ALA A 179 ? N ALA A 187 B 4 5 O ILE A 180 ? O ILE A 188 N ILE A 173 ? N ILE A 181 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 76 ? ? -116.92 62.27 2 1 SER A 220 ? ? -162.50 -169.81 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 377 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -22.4122 _pdbx_refine_tls.origin_y -4.6759 _pdbx_refine_tls.origin_z -4.8694 _pdbx_refine_tls.T[1][1] 0.3849 _pdbx_refine_tls.T[2][2] 0.2268 _pdbx_refine_tls.T[3][3] 0.1893 _pdbx_refine_tls.T[1][2] 0.0094 _pdbx_refine_tls.T[1][3] -0.0470 _pdbx_refine_tls.T[2][3] 0.0115 _pdbx_refine_tls.L[1][1] 1.7535 _pdbx_refine_tls.L[2][2] 0.8026 _pdbx_refine_tls.L[3][3] 1.2472 _pdbx_refine_tls.L[1][2] 0.2729 _pdbx_refine_tls.L[1][3] -0.4087 _pdbx_refine_tls.L[2][3] 0.0287 _pdbx_refine_tls.S[1][1] 0.0752 _pdbx_refine_tls.S[2][2] -0.0019 _pdbx_refine_tls.S[3][3] -0.0563 _pdbx_refine_tls.S[1][2] -0.2275 _pdbx_refine_tls.S[1][3] -0.1190 _pdbx_refine_tls.S[2][3] 0.0138 _pdbx_refine_tls.S[2][1] 0.1921 _pdbx_refine_tls.S[3][1] 0.2763 _pdbx_refine_tls.S[3][2] 0.1992 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 9 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 232 _pdbx_refine_tls_group.selection_details '(chain A and resid 9:232)' _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 107 ? A MET 99 2 1 Y 1 A ASP 108 ? A ASP 100 3 1 Y 1 A HIS 109 ? A HIS 101 4 1 Y 1 A SER 110 ? A SER 102 5 1 Y 1 A LEU 111 ? A LEU 103 6 1 Y 1 A ILE 112 ? A ILE 104 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _atom_sites.entry_id 3VNE _atom_sites.fract_transf_matrix[1][1] 0.016379 _atom_sites.fract_transf_matrix[1][2] 0.009457 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018913 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007672 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_