HEADER HYDROLASE 11-APR-12 3VRK TITLE CRYSTAL STRUCTUTRE OF THIOBACILLUS THIOPARUS THI115 CARBONYL SULFIDE TITLE 2 HYDROLASE / THIOCYANATE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBONYL SULFIDE HYDROLASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THIOBACILLUS THIOPARUS; SOURCE 3 ORGANISM_TAXID: 931; SOURCE 4 STRAIN: THI115; SOURCE 5 GENE: COS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-6P-1 KEYWDS ALPHA/BETA-FOLD, HOMOTETRAMER, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.KATAYAMA,K.NOGUCHI,T.OGAWA,A.OHTAKI,M.ODAKA,M.YOHDA REVDAT 4 08-NOV-23 3VRK 1 REMARK LINK REVDAT 3 22-NOV-17 3VRK 1 REMARK REVDAT 2 03-APR-13 3VRK 1 JRNL REVDAT 1 27-FEB-13 3VRK 0 JRNL AUTH T.OGAWA,K.NOGUCHI,M.SAITO,Y.NAGAHATA,H.KATO,A.OHTAKI, JRNL AUTH 2 H.NAKAYAMA,N.DOHMAE,Y.MATSUSHITA,M.ODAKA,M.YOHDA,H.NYUNOYA, JRNL AUTH 3 Y.KATAYAMA JRNL TITL CARBONYL SULFIDE HYDROLASE FROM THIOBACILLUS THIOPARUS JRNL TITL 2 STRAIN THI115 IS ONE OF THE BETA-CARBONIC ANHYDRASE FAMILY JRNL TITL 3 ENZYMES JRNL REF J.AM.CHEM.SOC. V. 135 3818 2013 JRNL REFN ISSN 0002-7863 JRNL PMID 23406161 JRNL DOI 10.1021/JA307735E REMARK 2 REMARK 2 RESOLUTION. 1.33 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.33 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 3 CROSS-VALIDATION METHOD : FREE R REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.177 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.156 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 5.300 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 2493 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 47313 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : 0.170 REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : 0.150 REMARK 3 FREE R VALUE (F>4SIG(F)) : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : 5.300 REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : 2324 REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 44139 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1583 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 155 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : 1741.0 REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : 0.00 REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : 5 REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 15051 REMARK 3 NUMBER OF RESTRAINTS : 18741 REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 ANGLE DISTANCES (A) : 0.028 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : 0.000 REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : 0.031 REMARK 3 ZERO CHIRAL VOLUMES (A**3) : 0.061 REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : 0.070 REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : 0.028 REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : 0.004 REMARK 3 SIMILAR ADP COMPONENTS (A**2) : 0.030 REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : 0.047 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH & HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3VRK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1000095412. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-MAR-10 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : TRIANGULAR SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49976 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.330 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 14.10 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : 0.05400 REMARK 200 FOR THE DATA SET : 60.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.33 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.90 REMARK 200 R MERGE FOR SHELL (I) : 0.33400 REMARK 200 R SYM FOR SHELL (I) : 0.33400 REMARK 200 FOR SHELL : 10.90 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3VQJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.2M AMMONIUM SULFATE, 200MM SODIIUM REMARK 280 CHLORIDE, 30% GLYCEROL 200MM TRIS, PH 8.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 45.15350 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 45.15350 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 52.56650 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 45.15350 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 45.15350 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 52.56650 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 45.15350 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 45.15350 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 52.56650 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 45.15350 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 45.15350 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 52.56650 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 45.15350 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 45.15350 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 52.56650 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 45.15350 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 45.15350 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 52.56650 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 45.15350 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 45.15350 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 52.56650 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 45.15350 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 45.15350 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 52.56650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -296.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -90.30700 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 45.15350 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 -45.15350 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 -52.56650 REMARK 350 BIOMT1 4 0.000000 -1.000000 0.000000 -45.15350 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 -45.15350 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -52.56650 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NA NA A 302 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 534 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 573 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 LYS A 3 REMARK 465 SER A 4 REMARK 465 GLY A 217 REMARK 465 PHE A 218 REMARK 465 GLY A 219 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 24 CZ NH1 NH2 REMARK 470 ASP A 108 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 107 CB - CG - OD1 ANGL. DEV. = 6.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 90 13.12 -143.67 REMARK 500 GLN A 146 31.38 70.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 44 SG REMARK 620 2 HIS A 97 NE2 109.4 REMARK 620 3 CYS A 100 SG 123.5 107.9 REMARK 620 4 HOH A 605 O 109.7 95.1 107.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 302 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 50 OD1 REMARK 620 2 ASP A 50 OD2 54.2 REMARK 620 3 GLU A 52 OE1 82.8 129.6 REMARK 620 4 HOH A 534 O 81.8 70.7 133.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SCN A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3VQJ RELATED DB: PDB DBREF 3VRK A 1 219 UNP H1AAP2 H1AAP2_THITI 1 219 SEQRES 1 A 219 MET GLU LYS SER ASN THR ASP ALA LEU LEU GLU ASN ASN SEQRES 2 A 219 ARG LEU TYR ALA GLY GLY GLN ALA THR HIS ARG PRO GLY SEQRES 3 A 219 HIS PRO GLY MET GLN PRO ILE GLN PRO SER ARG ARG VAL SEQRES 4 A 219 ALA VAL VAL ALA CYS MET ASP ALA ARG LEU ASP VAL GLU SEQRES 5 A 219 ASP LEU LEU GLY LEU GLN THR GLY GLU ALA HIS ILE ILE SEQRES 6 A 219 ARG ASN ALA GLY GLY VAL ILE ASN GLU ASP ALA ILE ARG SEQRES 7 A 219 CYS LEU ILE ILE SER HIS HIS LEU LEU ASN THR HIS GLU SEQRES 8 A 219 ILE ILE LEU VAL HIS HIS THR ARG CYS GLY MET LEU ALA SEQRES 9 A 219 PHE THR ASP ASP LEU LEU ARG ALA GLY LEU GLU GLY ASP SEQRES 10 A 219 ALA ALA ALA GLU LYS LEU ILE GLY GLN ALA THR GLY ARG SEQRES 11 A 219 ALA PHE VAL SER ALA GLY LYS ALA SER ALA SER PRO ALA SEQRES 12 A 219 ALA PHE GLN ALA PHE ARG GLY PRO PRO GLU PRO LEU ASP SEQRES 13 A 219 ALA PRO ARG SER ASP ALA SER THR GLU ARG ILE ALA ALA SEQRES 14 A 219 ASP VAL ARG ARG GLY LEU SER ILE ILE LEU ASN HIS PRO SEQRES 15 A 219 TRP LEU PRO THR ALA GLY PRO ASP ALA ILE THR VAL ARG SEQRES 16 A 219 GLY PHE ILE TYR ASP VAL ASP THR GLY ARG LEU GLU GLU SEQRES 17 A 219 VAL SER TYR PRO GLY PRO MET GLY GLY PHE GLY HET ZN A 301 1 HET NA A 302 1 HET SCN A 303 3 HETNAM ZN ZINC ION HETNAM NA SODIUM ION HETNAM SCN THIOCYANATE ION FORMUL 2 ZN ZN 2+ FORMUL 3 NA NA 1+ FORMUL 4 SCN C N S 1- FORMUL 5 HOH *155(H2 O) HELIX 1 1 ASN A 5 GLY A 18 1 14 HELIX 2 2 ASP A 50 GLY A 56 1 7 HELIX 3 3 ASN A 73 LEU A 86 1 14 HELIX 4 4 CYS A 100 ALA A 104 5 5 HELIX 5 5 THR A 106 GLY A 116 1 11 HELIX 6 6 ASP A 117 GLY A 129 1 13 HELIX 7 7 SER A 160 HIS A 181 1 22 SHEET 1 A 5 ALA A 62 ASN A 67 0 SHEET 2 A 5 VAL A 39 CYS A 44 1 N VAL A 41 O ILE A 65 SHEET 3 A 5 GLU A 91 HIS A 97 1 O VAL A 95 N VAL A 42 SHEET 4 A 5 THR A 193 TYR A 199 1 O TYR A 199 N HIS A 96 SHEET 5 A 5 LEU A 206 GLU A 208 -1 O GLU A 207 N ILE A 198 LINK SG CYS A 44 ZN ZN A 301 1555 1555 2.28 LINK OD1 ASP A 50 NA NA A 302 1555 1555 2.38 LINK OD2 ASP A 50 NA NA A 302 1555 1555 2.45 LINK OE1 GLU A 52 NA NA A 302 1555 1555 2.48 LINK NE2 HIS A 97 ZN ZN A 301 1555 1555 2.04 LINK SG CYS A 100 ZN ZN A 301 1555 1555 2.31 LINK ZN ZN A 301 O HOH A 605 1555 1555 2.08 LINK NA NA A 302 O HOH A 534 1555 1555 2.52 CISPEP 1 SER A 141 PRO A 142 0 -1.29 CISPEP 2 SER A 141 PRO A 142 0 -3.11 CISPEP 3 TYR A 211 PRO A 212 0 -8.71 SITE 1 AC1 4 CYS A 44 HIS A 97 CYS A 100 HOH A 605 SITE 1 AC2 3 ASP A 50 GLU A 52 HOH A 534 SITE 1 AC3 6 MET A 45 ASP A 46 HIS A 63 LEU A 87 SITE 2 AC3 6 HOH A 605 HOH A 606 CRYST1 90.307 90.307 105.133 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011073 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011073 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009512 0.00000