HEADER HYDROLASE 14-JUL-12 3VV3 TITLE CRYSTAL STRUCTURE OF DESEASIN MCP-01 FROM PSEUDOALTEROMONAS SP. SM9913 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DESEASIN MCP-01; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CATALYTIC DOMAIN, UNP RESIDUES 117-450; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOALTEROMONAS SP.; SOURCE 3 ORGANISM_TAXID: 234831; SOURCE 4 STRAIN: SM9913; SOURCE 5 GENE: PSM_B0251; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ALPHA/BETA, PROTEASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR G.Y.ZHAO,X.GAO,X.L.CHEN,Y.Z.ZHANG REVDAT 4 08-NOV-23 3VV3 1 REMARK LINK REVDAT 3 04-DEC-19 3VV3 1 REMARK REVDAT 2 31-JUL-19 3VV3 1 JRNL REVDAT 1 07-AUG-13 3VV3 0 JRNL AUTH L.Y.RAN,H.N.SU,G.Y.ZHAO,X.GAO,M.Y.ZHOU,P.WANG,H.L.ZHAO, JRNL AUTH 2 B.B.XIE,X.Y.ZHANG,X.L.CHEN,B.C.ZHOU,Y.Z.ZHANG JRNL TITL STRUCTURAL AND MECHANISTIC INSIGHTS INTO COLLAGEN JRNL TITL 2 DEGRADATION BY A BACTERIAL COLLAGENOLYTIC SERINE PROTEASE IN JRNL TITL 3 THE SUBTILISIN FAMILY. JRNL REF MOL. MICROBIOL. V. 90 997 2013 JRNL REFN ESSN 1365-2958 JRNL PMID 24112706 JRNL DOI 10.1111/MMI.12412 REMARK 2 REMARK 2 RESOLUTION. 1.76 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.5_2) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.76 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.130 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 70272 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.840 REMARK 3 FREE R VALUE TEST SET COUNT : 1995 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.4040 - 4.2396 0.97 5022 151 0.1876 0.1947 REMARK 3 2 4.2396 - 3.3663 1.00 4985 145 0.1463 0.1758 REMARK 3 3 3.3663 - 2.9412 1.00 4960 141 0.1643 0.1655 REMARK 3 4 2.9412 - 2.6724 1.00 4916 146 0.1759 0.2153 REMARK 3 5 2.6724 - 2.4810 1.00 4911 144 0.1715 0.1895 REMARK 3 6 2.4810 - 2.3347 1.00 4856 143 0.1663 0.1944 REMARK 3 7 2.3347 - 2.2178 1.00 4865 144 0.1594 0.1985 REMARK 3 8 2.2178 - 2.1213 1.00 4888 137 0.1590 0.2066 REMARK 3 9 2.1213 - 2.0397 1.00 4834 145 0.1554 0.1846 REMARK 3 10 2.0397 - 1.9693 0.99 4829 140 0.1585 0.1929 REMARK 3 11 1.9693 - 1.9077 0.99 4820 141 0.1586 0.1849 REMARK 3 12 1.9077 - 1.8532 0.99 4817 147 0.1639 0.2131 REMARK 3 13 1.8532 - 1.8044 0.99 4834 136 0.1710 0.2132 REMARK 3 14 1.8044 - 1.7604 0.98 4740 135 0.1760 0.2216 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 40.09 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.76120 REMARK 3 B22 (A**2) : 0.47420 REMARK 3 B33 (A**2) : -1.23540 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4766 REMARK 3 ANGLE : 1.065 6514 REMARK 3 CHIRALITY : 0.074 748 REMARK 3 PLANARITY : 0.004 890 REMARK 3 DIHEDRAL : 17.737 1598 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3VV3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-JUL-12. REMARK 100 THE DEPOSITION ID IS D_1000095536. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9895 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 70272 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.760 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.04300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.76 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2SNI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES, PH7.7, 70% MPD, 1MM GSH, REMARK 280 1MM GSSG, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.39600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.81350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.22700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 68.81350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.39600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.22700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 0 REMARK 465 THR A 330 REMARK 465 PRO A 331 REMARK 465 GLY A 332 REMARK 465 PHE A 333 REMARK 465 ALA B 0 REMARK 465 THR B 330 REMARK 465 PRO B 331 REMARK 465 GLY B 332 REMARK 465 PHE B 333 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 230 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 49 -146.32 -170.64 REMARK 500 GLU A 102 -53.16 -121.17 REMARK 500 VAL A 122 -157.27 -112.02 REMARK 500 ASP A 328 -121.28 57.75 REMARK 500 ASP B 49 -147.03 -172.57 REMARK 500 GLU B 102 -53.58 -121.58 REMARK 500 VAL B 122 -156.34 -111.74 REMARK 500 ASP B 192 41.52 70.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 25 OD1 REMARK 620 2 ASP A 27 OD2 103.4 REMARK 620 3 ASP A 27 OD1 94.5 50.1 REMARK 620 4 ASP A 29 OD1 81.6 121.2 71.2 REMARK 620 5 HOH A 509 O 92.8 150.1 154.3 85.6 REMARK 620 6 HOH A 522 O 94.1 71.1 120.9 167.6 83.0 REMARK 620 7 HOH A 532 O 164.4 88.7 85.6 83.6 80.9 99.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 25 OD1 REMARK 620 2 ASP A 25 OD2 51.8 REMARK 620 3 ASP A 29 OD2 126.4 164.3 REMARK 620 4 ASP A 29 OD1 76.5 127.6 50.8 REMARK 620 5 HOH A 544 O 73.5 79.3 85.3 78.0 REMARK 620 6 HOH A 614 O 84.6 99.9 95.3 81.4 152.8 REMARK 620 7 HOH A 615 O 130.1 88.8 82.7 124.9 69.5 137.7 REMARK 620 8 HOH A 643 O 132.2 91.4 97.2 136.1 135.4 71.7 66.8 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 69 OE2 REMARK 620 2 ASP A 76 OD1 100.4 REMARK 620 3 ASP A 78 OD1 90.0 81.1 REMARK 620 4 ASN A 80 OD1 177.1 80.4 87.4 REMARK 620 5 TYR A 82 O 92.8 80.5 161.5 90.1 REMARK 620 6 ASP A 85 OD1 84.7 165.7 112.4 95.1 86.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 69 OE1 REMARK 620 2 ILE A 70 O 95.6 REMARK 620 3 ASP A 73 OD1 176.8 87.6 REMARK 620 4 ILE A 75 O 90.7 173.4 86.1 REMARK 620 5 ASP A 84 OD1 96.0 90.1 83.5 87.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 25 OD2 REMARK 620 2 ASP B 25 OD1 51.5 REMARK 620 3 ASP B 29 OD2 165.6 120.1 REMARK 620 4 ASP B 29 OD1 123.7 72.5 48.4 REMARK 620 5 HOH B 518 O 82.4 73.8 83.8 77.7 REMARK 620 6 HOH B 555 O 99.7 81.6 89.5 73.6 146.7 REMARK 620 7 HOH B 565 O 93.7 130.8 99.8 131.6 142.8 70.5 REMARK 620 8 HOH B 626 O 93.7 134.9 86.4 128.6 73.8 138.5 69.6 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 25 OD1 REMARK 620 2 ASP B 27 OD2 102.4 REMARK 620 3 ASP B 27 OD1 94.2 48.4 REMARK 620 4 ASP B 29 OD1 84.1 121.2 73.0 REMARK 620 5 HOH B 506 O 168.0 86.3 85.3 84.3 REMARK 620 6 HOH B 532 O 93.1 70.3 118.5 168.5 97.6 REMARK 620 7 HOH B 547 O 92.8 148.7 158.0 87.1 83.5 81.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 69 OE2 REMARK 620 2 ASP B 76 OD1 97.4 REMARK 620 3 ASP B 78 OD1 87.2 84.0 REMARK 620 4 ASN B 80 OD1 178.5 82.5 91.4 REMARK 620 5 TYR B 82 O 89.7 78.5 161.7 91.7 REMARK 620 6 ASP B 85 OD1 85.5 163.6 112.3 95.0 85.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 69 OE1 REMARK 620 2 ILE B 70 O 96.9 REMARK 620 3 ASP B 73 OD1 175.1 85.9 REMARK 620 4 ILE B 75 O 91.2 170.5 85.7 REMARK 620 5 ASN B 77 OD1 83.5 93.6 92.3 82.2 REMARK 620 6 ASP B 84 OD1 97.7 92.6 86.2 91.3 173.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 404 DBREF 3VV3 A 0 333 UNP E6RQT7 E6RQT7_PSEU9 117 450 DBREF 3VV3 B 0 333 UNP E6RQT7 E6RQT7_PSEU9 117 450 SEQRES 1 A 334 ALA SER ALA THR ASN ASP PRO ARG PHE ASP ASP LEU TRP SEQRES 2 A 334 GLY LEU ASN ASN GLU GLY GLN THR GLY GLY THR ALA ASP SEQRES 3 A 334 ALA ASP ILE ASP ALA PRO GLU ALA TRP SER ILE SER THR SEQRES 4 A 334 GLY SER ARG ASP VAL VAL VAL GLY VAL ILE ASP THR GLY SEQRES 5 A 334 VAL ASP TYR SER HIS PRO ASP LEU ALA ALA ASN ALA TRP SEQRES 6 A 334 VAL ASN SER GLY GLU ILE ALA GLY ASP GLY ILE ASP ASN SEQRES 7 A 334 ASP GLY ASN GLY TYR ILE ASP ASP VAL HIS GLY ILE ASN SEQRES 8 A 334 ALA ILE THR ASP VAL GLY ASP PRO MET ASP ASP GLU GLY SEQRES 9 A 334 HIS GLY THR HIS VAL SER GLY THR ILE GLY ALA SER GLY SEQRES 10 A 334 ASN ASN GLY VAL GLY VAL VAL GLY VAL ASN HIS ASP VAL SEQRES 11 A 334 SER ILE VAL GLY CYS LYS PHE LEU ALA ALA ASP GLY THR SEQRES 12 A 334 GLY SER THR SER GLY ALA ILE LYS CYS ILE ASP TYR MET SEQRES 13 A 334 VAL GLY LEU LYS ASN ALA GLY VAL ASN LEU ARG VAL LEU SEQRES 14 A 334 ASN ASN SER TRP GLY GLY GLY GLY PHE SER GLN ALA LEU SEQRES 15 A 334 ALA ASP ALA ILE THR ALA SER GLU GLN ALA ASP ILE LEU SEQRES 16 A 334 PHE VAL ALA ALA ALA GLY ASN ASP ALA VAL ASP ASN ASP SEQRES 17 A 334 GLN ASN PRO HIS TYR PRO SER ASN TYR GLU ASN ASP ASN SEQRES 18 A 334 VAL LEU SER ILE ALA SER THR ASP SER ARG ASP ASN MET SEQRES 19 A 334 SER SER PHE SER GLN TRP GLY LEU THR SER VAL ASP MET SEQRES 20 A 334 GLY ALA PRO GLY SER GLY ILE LEU SER THR VAL PRO GLY SEQRES 21 A 334 ASN SER TYR ALA THR TYR SER GLY THR SER MET ALA THR SEQRES 22 A 334 PRO HIS VAL ALA GLY ALA ALA ALA LEU VAL LEU SER VAL SEQRES 23 A 334 ASN PRO ASP LEU THR THR LEU GLU LEU LYS GLU LEU LEU SEQRES 24 A 334 MET SER SER GLY ASP ALA ASN ALA ALA LEU ASN GLY LYS SEQRES 25 A 334 THR VAL ALA GLY THR ARG LEU ASN VAL ASN GLN ALA LEU SEQRES 26 A 334 ILE ASP ALA ASP PRO THR PRO GLY PHE SEQRES 1 B 334 ALA SER ALA THR ASN ASP PRO ARG PHE ASP ASP LEU TRP SEQRES 2 B 334 GLY LEU ASN ASN GLU GLY GLN THR GLY GLY THR ALA ASP SEQRES 3 B 334 ALA ASP ILE ASP ALA PRO GLU ALA TRP SER ILE SER THR SEQRES 4 B 334 GLY SER ARG ASP VAL VAL VAL GLY VAL ILE ASP THR GLY SEQRES 5 B 334 VAL ASP TYR SER HIS PRO ASP LEU ALA ALA ASN ALA TRP SEQRES 6 B 334 VAL ASN SER GLY GLU ILE ALA GLY ASP GLY ILE ASP ASN SEQRES 7 B 334 ASP GLY ASN GLY TYR ILE ASP ASP VAL HIS GLY ILE ASN SEQRES 8 B 334 ALA ILE THR ASP VAL GLY ASP PRO MET ASP ASP GLU GLY SEQRES 9 B 334 HIS GLY THR HIS VAL SER GLY THR ILE GLY ALA SER GLY SEQRES 10 B 334 ASN ASN GLY VAL GLY VAL VAL GLY VAL ASN HIS ASP VAL SEQRES 11 B 334 SER ILE VAL GLY CYS LYS PHE LEU ALA ALA ASP GLY THR SEQRES 12 B 334 GLY SER THR SER GLY ALA ILE LYS CYS ILE ASP TYR MET SEQRES 13 B 334 VAL GLY LEU LYS ASN ALA GLY VAL ASN LEU ARG VAL LEU SEQRES 14 B 334 ASN ASN SER TRP GLY GLY GLY GLY PHE SER GLN ALA LEU SEQRES 15 B 334 ALA ASP ALA ILE THR ALA SER GLU GLN ALA ASP ILE LEU SEQRES 16 B 334 PHE VAL ALA ALA ALA GLY ASN ASP ALA VAL ASP ASN ASP SEQRES 17 B 334 GLN ASN PRO HIS TYR PRO SER ASN TYR GLU ASN ASP ASN SEQRES 18 B 334 VAL LEU SER ILE ALA SER THR ASP SER ARG ASP ASN MET SEQRES 19 B 334 SER SER PHE SER GLN TRP GLY LEU THR SER VAL ASP MET SEQRES 20 B 334 GLY ALA PRO GLY SER GLY ILE LEU SER THR VAL PRO GLY SEQRES 21 B 334 ASN SER TYR ALA THR TYR SER GLY THR SER MET ALA THR SEQRES 22 B 334 PRO HIS VAL ALA GLY ALA ALA ALA LEU VAL LEU SER VAL SEQRES 23 B 334 ASN PRO ASP LEU THR THR LEU GLU LEU LYS GLU LEU LEU SEQRES 24 B 334 MET SER SER GLY ASP ALA ASN ALA ALA LEU ASN GLY LYS SEQRES 25 B 334 THR VAL ALA GLY THR ARG LEU ASN VAL ASN GLN ALA LEU SEQRES 26 B 334 ILE ASP ALA ASP PRO THR PRO GLY PHE HET CA A 401 1 HET CA A 402 1 HET CA A 403 1 HET CA A 404 1 HET CA B 401 1 HET CA B 402 1 HET CA B 403 1 HET CA B 404 1 HETNAM CA CALCIUM ION FORMUL 3 CA 8(CA 2+) FORMUL 11 HOH *858(H2 O) HELIX 1 1 ARG A 7 LEU A 11 5 5 HELIX 2 2 ASP A 29 TRP A 34 1 6 HELIX 3 3 LEU A 59 ALA A 63 5 5 HELIX 4 4 GLY A 103 ALA A 114 1 12 HELIX 5 5 SER A 144 ALA A 161 1 18 HELIX 6 6 SER A 178 ALA A 191 1 14 HELIX 7 7 GLY A 267 SER A 284 1 18 HELIX 8 8 THR A 290 SER A 301 1 12 HELIX 9 9 ASN A 319 ALA A 327 1 9 HELIX 10 10 ARG B 7 LEU B 11 5 5 HELIX 11 11 ASP B 29 SER B 35 1 7 HELIX 12 12 LEU B 59 ALA B 63 5 5 HELIX 13 13 GLY B 103 ALA B 114 1 12 HELIX 14 14 SER B 144 ALA B 161 1 18 HELIX 15 15 SER B 178 ALA B 191 1 14 HELIX 16 16 GLY B 267 ASN B 286 1 20 HELIX 17 17 THR B 290 SER B 301 1 12 HELIX 18 18 ASN B 319 ASP B 328 1 10 SHEET 1 A 7 GLY A 88 ASN A 90 0 SHEET 2 A 7 SER A 130 LYS A 135 1 O LYS A 135 N ILE A 89 SHEET 3 A 7 VAL A 44 ASP A 49 1 N VAL A 45 O SER A 130 SHEET 4 A 7 LEU A 165 ASN A 170 1 O ASN A 169 N GLY A 46 SHEET 5 A 7 LEU A 194 ALA A 198 1 O LEU A 194 N ARG A 166 SHEET 6 A 7 VAL A 221 THR A 227 1 O ILE A 224 N ALA A 197 SHEET 7 A 7 MET A 246 PRO A 249 1 O MET A 246 N ALA A 225 SHEET 1 B 2 ILE A 253 VAL A 257 0 SHEET 2 B 2 SER A 261 TYR A 265 -1 O TYR A 265 N ILE A 253 SHEET 1 C 2 ASP A 303 ALA A 304 0 SHEET 2 C 2 THR A 316 ARG A 317 -1 O ARG A 317 N ASP A 303 SHEET 1 D 7 GLY B 88 ASN B 90 0 SHEET 2 D 7 SER B 130 LYS B 135 1 O LYS B 135 N ILE B 89 SHEET 3 D 7 VAL B 44 ASP B 49 1 N VAL B 45 O SER B 130 SHEET 4 D 7 LEU B 165 ASN B 170 1 O ASN B 169 N GLY B 46 SHEET 5 D 7 LEU B 194 ALA B 198 1 O LEU B 194 N LEU B 168 SHEET 6 D 7 VAL B 221 THR B 227 1 O ILE B 224 N ALA B 197 SHEET 7 D 7 MET B 246 PRO B 249 1 O MET B 246 N ALA B 225 SHEET 1 E 2 ILE B 253 VAL B 257 0 SHEET 2 E 2 SER B 261 TYR B 265 -1 O TYR B 265 N ILE B 253 SHEET 1 F 2 ASP B 303 ALA B 304 0 SHEET 2 F 2 THR B 316 ARG B 317 -1 O ARG B 317 N ASP B 303 SSBOND 1 CYS A 134 CYS A 151 1555 1555 2.03 SSBOND 2 CYS B 134 CYS B 151 1555 1555 2.04 LINK OD1 ASP A 25 CA CA A 402 1555 1555 2.30 LINK OD1 ASP A 25 CA CA A 403 1555 1555 2.49 LINK OD2 ASP A 25 CA CA A 403 1555 1555 2.51 LINK OD2 ASP A 27 CA CA A 402 1555 1555 2.57 LINK OD1 ASP A 27 CA CA A 402 1555 1555 2.62 LINK OD1 ASP A 29 CA CA A 402 1555 1555 2.54 LINK OD2 ASP A 29 CA CA A 403 1555 1555 2.46 LINK OD1 ASP A 29 CA CA A 403 1555 1555 2.62 LINK OE2 GLU A 69 CA CA A 401 1555 1555 2.26 LINK OE1 GLU A 69 CA CA A 404 1555 1555 2.30 LINK O ILE A 70 CA CA A 404 1555 1555 2.38 LINK OD1 ASP A 73 CA CA A 404 1555 1555 2.42 LINK O ILE A 75 CA CA A 404 1555 1555 2.42 LINK OD1 ASP A 76 CA CA A 401 1555 1555 2.43 LINK OD1 ASP A 78 CA CA A 401 1555 1555 2.38 LINK OD1 ASN A 80 CA CA A 401 1555 1555 2.52 LINK O TYR A 82 CA CA A 401 1555 1555 2.35 LINK OD1 ASP A 84 CA CA A 404 1555 1555 2.39 LINK OD1 ASP A 85 CA CA A 401 1555 1555 2.32 LINK CA CA A 402 O HOH A 509 1555 1555 2.32 LINK CA CA A 402 O HOH A 522 1555 1555 2.32 LINK CA CA A 402 O HOH A 532 1555 1555 2.58 LINK CA CA A 403 O HOH A 544 1555 1555 2.67 LINK CA CA A 403 O HOH A 614 1555 1555 2.25 LINK CA CA A 403 O HOH A 615 1555 1555 2.52 LINK CA CA A 403 O HOH A 643 1555 1555 2.49 LINK OD2 ASP B 25 CA CA B 401 1555 1555 2.41 LINK OD1 ASP B 25 CA CA B 401 1555 1555 2.57 LINK OD1 ASP B 25 CA CA B 402 1555 1555 2.27 LINK OD2 ASP B 27 CA CA B 402 1555 1555 2.65 LINK OD1 ASP B 27 CA CA B 402 1555 1555 2.70 LINK OD2 ASP B 29 CA CA B 401 1555 1555 2.51 LINK OD1 ASP B 29 CA CA B 401 1555 1555 2.76 LINK OD1 ASP B 29 CA CA B 402 1555 1555 2.44 LINK OE2 GLU B 69 CA CA B 403 1555 1555 2.33 LINK OE1 GLU B 69 CA CA B 404 1555 1555 2.26 LINK O ILE B 70 CA CA B 404 1555 1555 2.34 LINK OD1 ASP B 73 CA CA B 404 1555 1555 2.46 LINK O ILE B 75 CA CA B 404 1555 1555 2.41 LINK OD1 ASP B 76 CA CA B 403 1555 1555 2.45 LINK OD1 ASN B 77 CA CA B 404 1555 1555 2.38 LINK OD1 ASP B 78 CA CA B 403 1555 1555 2.30 LINK OD1 ASN B 80 CA CA B 403 1555 1555 2.43 LINK O TYR B 82 CA CA B 403 1555 1555 2.42 LINK OD1 ASP B 84 CA CA B 404 1555 1555 2.29 LINK OD1 ASP B 85 CA CA B 403 1555 1555 2.34 LINK CA CA B 401 O HOH B 518 1555 1555 2.57 LINK CA CA B 401 O HOH B 555 1555 1555 2.41 LINK CA CA B 401 O HOH B 565 1555 1555 2.39 LINK CA CA B 401 O HOH B 626 1555 1555 2.46 LINK CA CA B 402 O HOH B 506 1555 1555 2.52 LINK CA CA B 402 O HOH B 532 1555 1555 2.44 LINK CA CA B 402 O HOH B 547 1555 1555 2.28 CISPEP 1 TYR A 212 PRO A 213 0 6.67 CISPEP 2 ASP A 328 PRO A 329 0 -2.23 CISPEP 3 TYR B 212 PRO B 213 0 7.14 SITE 1 AC1 6 GLU A 69 ASP A 76 ASP A 78 ASN A 80 SITE 2 AC1 6 TYR A 82 ASP A 85 SITE 1 AC2 6 ASP A 25 ASP A 27 ASP A 29 HOH A 509 SITE 2 AC2 6 HOH A 522 HOH A 532 SITE 1 AC3 6 ASP A 25 ASP A 29 HOH A 544 HOH A 614 SITE 2 AC3 6 HOH A 615 HOH A 643 SITE 1 AC4 6 GLU A 69 ILE A 70 ASP A 73 ILE A 75 SITE 2 AC4 6 ASN A 77 ASP A 84 SITE 1 AC5 6 ASP B 25 ASP B 29 HOH B 518 HOH B 555 SITE 2 AC5 6 HOH B 565 HOH B 626 SITE 1 AC6 6 ASP B 25 ASP B 27 ASP B 29 HOH B 506 SITE 2 AC6 6 HOH B 532 HOH B 547 SITE 1 AC7 6 GLU B 69 ASP B 76 ASP B 78 ASN B 80 SITE 2 AC7 6 TYR B 82 ASP B 85 SITE 1 AC8 6 GLU B 69 ILE B 70 ASP B 73 ILE B 75 SITE 2 AC8 6 ASN B 77 ASP B 84 CRYST1 70.792 72.454 137.627 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014126 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013802 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007266 0.00000