HEADER TRANSPORT PROTEIN 27-JUL-12 3VVN TITLE CRYSTAL STRUCTURE OF MATE IN THE STRAIGHT CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ARCHAEAL-TYPE TRANSPORTER; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS; SOURCE 3 ORGANISM_TAXID: 186497; SOURCE 4 STRAIN: JCM 8422; SOURCE 5 GENE: PF0708; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: C41(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET11A KEYWDS MATE, MULTIDRUG TRANSPORTER, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.TANAKA,R.ISHITANI,O.NUREKI REVDAT 4 20-MAR-24 3VVN 1 REMARK REVDAT 3 22-NOV-17 3VVN 1 REMARK REVDAT 2 29-JAN-14 3VVN 1 JRNL REVDAT 1 03-APR-13 3VVN 0 JRNL AUTH Y.TANAKA,C.J.HIPOLITO,A.D.MATURANA,K.ITO,T.KURODA,T.HIGUCHI, JRNL AUTH 2 T.KATOH,H.E.KATO,M.HATTORI,K.KUMAZAKI,T.TSUKAZAKI, JRNL AUTH 3 R.ISHITANI,H.SUGA,O.NUREKI JRNL TITL STRUCTURAL BASIS FOR THE DRUG EXTRUSION MECHANISM BY A MATE JRNL TITL 2 MULTIDRUG TRANSPORTER. JRNL REF NATURE V. 496 247 2013 JRNL REFN ISSN 0028-0836 JRNL PMID 23535598 JRNL DOI 10.1038/NATURE12014 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.2_869 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.33 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.080 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 24429 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.150 REMARK 3 FREE R VALUE TEST SET COUNT : 1990 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.3384 - 5.7741 0.99 1701 145 0.2268 0.2389 REMARK 3 2 5.7741 - 4.5847 0.97 1602 144 0.2208 0.2384 REMARK 3 3 4.5847 - 4.0057 0.88 1439 128 0.1962 0.2264 REMARK 3 4 4.0057 - 3.6396 1.00 1656 145 0.1912 0.2157 REMARK 3 5 3.6396 - 3.3789 0.99 1629 145 0.1772 0.2186 REMARK 3 6 3.3789 - 3.1797 1.00 1633 149 0.1823 0.2282 REMARK 3 7 3.1797 - 3.0205 0.99 1622 143 0.1795 0.2083 REMARK 3 8 3.0205 - 2.8891 1.00 1630 141 0.1852 0.2223 REMARK 3 9 2.8891 - 2.7779 0.99 1617 147 0.1986 0.2359 REMARK 3 10 2.7779 - 2.6820 0.99 1623 141 0.2027 0.2313 REMARK 3 11 2.6820 - 2.5982 0.99 1584 138 0.2166 0.2523 REMARK 3 12 2.5982 - 2.5239 0.99 1597 145 0.2380 0.2728 REMARK 3 13 2.5239 - 2.4575 0.98 1605 142 0.2542 0.2993 REMARK 3 14 2.4575 - 2.3975 0.92 1501 137 0.2721 0.3383 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.47 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 46.04 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.670 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.56360 REMARK 3 B22 (A**2) : 0.60440 REMARK 3 B33 (A**2) : -4.16800 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 5.78310 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3472 REMARK 3 ANGLE : 0.753 4658 REMARK 3 CHIRALITY : 0.050 566 REMARK 3 PLANARITY : 0.004 554 REMARK 3 DIHEDRAL : 16.833 1247 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 4:235) REMARK 3 ORIGIN FOR THE GROUP (A): -36.9389 3.1798 -27.5872 REMARK 3 T TENSOR REMARK 3 T11: 0.1567 T22: -0.0387 REMARK 3 T33: 0.0844 T12: 0.0103 REMARK 3 T13: -0.0116 T23: 0.0103 REMARK 3 L TENSOR REMARK 3 L11: 0.3396 L22: 1.7958 REMARK 3 L33: 0.8657 L12: 0.0369 REMARK 3 L13: 0.5364 L23: 0.1235 REMARK 3 S TENSOR REMARK 3 S11: -0.0186 S12: 0.0167 S13: -0.0233 REMARK 3 S21: -0.0802 S22: -0.0242 S23: -0.0527 REMARK 3 S31: -0.0781 S32: 0.0881 S33: 0.0256 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 236:454) REMARK 3 ORIGIN FOR THE GROUP (A): -19.0942 -5.5816 -16.5164 REMARK 3 T TENSOR REMARK 3 T11: 0.0878 T22: 0.0959 REMARK 3 T33: 0.1317 T12: -0.0229 REMARK 3 T13: -0.0164 T23: 0.0405 REMARK 3 L TENSOR REMARK 3 L11: 2.1074 L22: 1.4829 REMARK 3 L33: 1.3590 L12: -0.6360 REMARK 3 L13: -0.7428 L23: 0.3445 REMARK 3 S TENSOR REMARK 3 S11: -0.0332 S12: 0.0168 S13: -0.0551 REMARK 3 S21: 0.0709 S22: -0.0398 S23: -0.2681 REMARK 3 S31: 0.0374 S32: 0.2546 S33: 0.0616 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3VVN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1000095556. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL32XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979, 0.900, 0.910 REMARK 200 MONOCHROMATOR : LIQUID NITROGEN COOLED DOUBLE REMARK 200 CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24440 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.398 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.11600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.37000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 32% PEG 400, 50MM MES-NAOH, 20MM REMARK 280 CACL2, 100MM NASCN, PH 6.5, LIPDIC CUBIC PHASE, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 77.94450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.05000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 77.94450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.05000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLU A 3 REMARK 465 LYS A 129 REMARK 465 GLY A 130 REMARK 465 TYR A 351 REMARK 465 SER A 352 REMARK 465 GLU A 353 REMARK 465 SER A 354 REMARK 465 SER A 455 REMARK 465 ALA A 456 REMARK 465 THR A 457 REMARK 465 GLY A 458 REMARK 465 GLY A 459 REMARK 465 LYS A 460 REMARK 465 ARG A 461 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 4 CG CD CE NZ REMARK 470 LYS A 7 CE NZ REMARK 470 ARG A 22 NE CZ NH1 NH2 REMARK 470 GLU A 51 CG CD OE1 OE2 REMARK 470 GLU A 91 OE1 OE2 REMARK 470 GLU A 131 CG CD OE1 OE2 REMARK 470 ASP A 231 CG OD1 OD2 REMARK 470 ARG A 284 CZ NH1 NH2 REMARK 470 ARG A 311 NE CZ NH1 NH2 REMARK 470 LYS A 325 CG CD CE NZ REMARK 470 LEU A 348 CG CD1 CD2 REMARK 470 VAL A 357 CG1 CG2 REMARK 470 LYS A 359 CE NZ REMARK 470 ARG A 423 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 453 CG CD CE NZ REMARK 470 THR A 454 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 231 35.48 -96.48 REMARK 500 THR A 368 -51.89 -129.14 REMARK 500 GLU A 391 62.42 -104.69 REMARK 500 LEU A 404 -60.49 -91.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 OLC A 501 REMARK 610 OLC A 502 REMARK 610 OLC A 503 REMARK 610 OLC A 504 REMARK 610 OLC A 505 REMARK 610 OLC A 506 REMARK 610 OLC A 507 REMARK 610 OLC A 508 REMARK 610 OLC A 509 REMARK 610 OLC A 510 REMARK 610 OLC A 511 REMARK 610 OLC A 512 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OLC A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OLC A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OLC A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OLC A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OLC A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OLC A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OLC A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OLC A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OLC A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OLC A 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OLC A 511 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OLC A 512 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3VVO RELATED DB: PDB REMARK 900 RELATED ID: 3VVP RELATED DB: PDB REMARK 900 RELATED ID: 3VVQ RELATED DB: PDB REMARK 900 RELATED ID: 3VVR RELATED DB: PDB REMARK 900 RELATED ID: 3VVS RELATED DB: PDB DBREF 3VVN A 1 461 UNP Q8U2X0 Q8U2X0_PYRFU 1 461 SEQRES 1 A 461 MET SER GLU LYS THR THR LYS GLY VAL GLN LEU LEU ARG SEQRES 2 A 461 GLY ASP PRO LYS LYS ALA ILE VAL ARG LEU SER ILE PRO SEQRES 3 A 461 MET MET ILE GLY MET SER VAL GLN THR LEU TYR ASN LEU SEQRES 4 A 461 ALA ASP GLY ILE TRP VAL SER GLY LEU GLY PRO GLU SER SEQRES 5 A 461 LEU ALA ALA VAL GLY LEU PHE PHE PRO VAL PHE MET GLY SEQRES 6 A 461 ILE ILE ALA LEU ALA ALA GLY LEU GLY VAL GLY THR SER SEQRES 7 A 461 SER ALA ILE ALA ARG ARG ILE GLY ALA ARG ASP LYS GLU SEQRES 8 A 461 GLY ALA ASP ASN VAL ALA VAL HIS SER LEU ILE LEU SER SEQRES 9 A 461 LEU ILE LEU GLY VAL THR ILE THR ILE THR MET LEU PRO SEQRES 10 A 461 ALA ILE ASP SER LEU PHE ARG SER MET GLY ALA LYS GLY SEQRES 11 A 461 GLU ALA VAL GLU LEU ALA ILE GLU TYR ALA ARG VAL LEU SEQRES 12 A 461 LEU ALA GLY ALA PHE ILE ILE VAL PHE ASN ASN VAL GLY SEQRES 13 A 461 ASN GLY ILE LEU ARG GLY GLU GLY ASP ALA ASN ARG ALA SEQRES 14 A 461 MET LEU ALA MET VAL LEU GLY SER GLY LEU ASN ILE VAL SEQRES 15 A 461 LEU ASP PRO ILE PHE ILE TYR THR LEU GLY PHE GLY VAL SEQRES 16 A 461 VAL GLY ALA ALA TYR ALA THR LEU LEU SER MET VAL VAL SEQRES 17 A 461 THR SER LEU PHE ILE ALA TYR TRP LEU PHE VAL LYS ARG SEQRES 18 A 461 ASP THR TYR VAL ASP ILE THR LEU ARG ASP PHE SER PRO SEQRES 19 A 461 SER ARG GLU ILE LEU LYS ASP ILE LEU ARG VAL GLY LEU SEQRES 20 A 461 PRO SER SER LEU SER GLN LEU SER MET SER ILE ALA MET SEQRES 21 A 461 PHE PHE LEU ASN SER VAL ALA ILE THR ALA GLY GLY GLU SEQRES 22 A 461 ASN GLY VAL ALA VAL PHE THR SER ALA TRP ARG ILE THR SEQRES 23 A 461 MET LEU GLY ILE VAL PRO ILE LEU GLY MET ALA ALA ALA SEQRES 24 A 461 THR THR SER VAL THR GLY ALA ALA TYR GLY GLU ARG ASN SEQRES 25 A 461 VAL GLU LYS LEU GLU THR ALA TYR LEU TYR ALA ILE LYS SEQRES 26 A 461 ILE ALA PHE MET ILE GLU LEU ALA VAL VAL ALA PHE ILE SEQRES 27 A 461 MET LEU PHE ALA PRO GLN VAL ALA TYR LEU PHE THR TYR SEQRES 28 A 461 SER GLU SER ALA GLN VAL ILE LYS GLY ASP LEU ILE SER SEQRES 29 A 461 ALA LEU ARG THR LEU PRO VAL PHE LEU VAL LEU THR PRO SEQRES 30 A 461 PHE GLY MET MET THR SER ALA MET PHE GLN GLY ILE GLY SEQRES 31 A 461 GLU GLY GLU LYS SER LEU ILE LEU THR ILE PHE ARG THR SEQRES 32 A 461 LEU VAL MET GLN VAL GLY PHE ALA TYR ILE PHE VAL HIS SEQRES 33 A 461 TYR THR THR LEU GLY LEU ARG GLY VAL TRP ILE GLY ILE SEQRES 34 A 461 VAL ILE GLY ASN MET VAL ALA ALA ILE VAL GLY PHE LEU SEQRES 35 A 461 TRP GLY ARG MET ARG ILE SER ALA LEU LYS LYS THR SER SEQRES 36 A 461 ALA THR GLY GLY LYS ARG HET OLC A 501 10 HET OLC A 502 13 HET OLC A 503 12 HET OLC A 504 8 HET OLC A 505 18 HET OLC A 506 12 HET OLC A 507 9 HET OLC A 508 15 HET OLC A 509 10 HET OLC A 510 11 HET OLC A 511 8 HET OLC A 512 10 HETNAM OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE HETSYN OLC 1-OLEOYL-R-GLYCEROL FORMUL 2 OLC 12(C21 H40 O4) FORMUL 14 HOH *30(H2 O) HELIX 1 1 THR A 6 ARG A 13 1 8 HELIX 2 2 ASP A 15 GLY A 47 1 33 HELIX 3 3 GLY A 49 ALA A 54 1 6 HELIX 4 4 ALA A 55 ALA A 87 1 33 HELIX 5 5 ASP A 89 LEU A 116 1 28 HELIX 6 6 ALA A 118 ALA A 128 1 11 HELIX 7 7 ALA A 132 ALA A 145 1 14 HELIX 8 8 GLY A 146 GLU A 163 1 18 HELIX 9 9 ASP A 165 TYR A 189 1 25 HELIX 10 10 GLY A 194 VAL A 219 1 26 HELIX 11 11 THR A 228 PHE A 232 5 5 HELIX 12 12 SER A 235 MET A 287 1 53 HELIX 13 13 GLY A 289 GLU A 310 1 22 HELIX 14 14 ASN A 312 PHE A 341 1 30 HELIX 15 15 PHE A 341 THR A 350 1 10 HELIX 16 16 ILE A 358 ARG A 367 1 10 HELIX 17 17 THR A 368 VAL A 374 5 7 HELIX 18 18 LEU A 375 ILE A 389 1 15 HELIX 19 19 GLU A 391 LEU A 404 1 14 HELIX 20 20 LEU A 404 TYR A 417 1 14 HELIX 21 21 GLY A 421 LYS A 453 1 33 CISPEP 1 LYS A 4 THR A 5 0 -4.41 CISPEP 2 ALA A 270 GLY A 271 0 16.30 SITE 1 AC1 4 ARG A 141 ASN A 167 MET A 170 OLC A 511 SITE 1 AC2 5 PRO A 61 MET A 64 GLY A 65 LEU A 254 SITE 2 AC2 5 SER A 257 SITE 1 AC3 3 GLY A 65 THR A 114 MET A 115 SITE 1 AC4 1 THR A 190 SITE 1 AC5 4 LEU A 101 ILE A 102 ARG A 221 ILE A 227 SITE 1 AC6 1 LEU A 288 SITE 1 AC7 8 MET A 27 MET A 31 GLN A 34 ASN A 153 SITE 2 AC7 8 ASN A 154 ASN A 157 ALA A 172 ILE A 213 SITE 1 AC8 8 MET A 256 MET A 287 PHE A 372 MET A 380 SITE 2 AC8 8 GLN A 387 THR A 399 ARG A 402 ASN A 433 SITE 1 AC9 9 TYR A 37 ILE A 67 ASN A 153 ASN A 154 SITE 2 AC9 9 GLY A 176 SER A 177 ASN A 180 MET A 206 SITE 3 AC9 9 THR A 209 SITE 1 BC1 1 ILE A 113 SITE 1 BC2 2 LEU A 105 OLC A 501 SITE 1 BC3 3 ARG A 141 ASN A 167 TYR A 200 CRYST1 155.889 60.100 68.127 90.00 90.27 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006415 0.000000 0.000030 0.00000 SCALE2 0.000000 0.016639 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014679 0.00000